Search

Reionization of helium is expected to occur at redshifts $z\sim3$ and have important consequences for quasar populations, galaxy formation, and the morphology of the intergalactic medium, but there is little known empirically about the process. Here we show that kinetic Sunyaev-Zeldovich (kSZ) tomography, based on the combination of CMB measurements and galaxy surveys, can be used to infer the primordial helium abundance as well as the time and duration of helium reionization. We find a high-significance detection at ${\sim10\sigma}$ can be expected from Vera Rubin Observatory and CMB-S4 in the near future. A more robust characterization of helium reionization will require next-generation experiments like MegaMapper (a proposed successor to DESI) and CMB-HD., Comment: 4+2 pages, 2 figures, comments welcome

We present a Bayesian jackknife test for assessing the probability that a data set contains biased subsets, and, if so, which of the subsets are likely to be biased. The test can be used to assess the presence and likely source of statistical tension between different measurements of the same quantities in an automated manner. Under certain broadly applicable assumptions, the test is analytically tractable. We also provide an open-source code, chiborg, that performs both analytic and numerical computations of the test on general Gaussian-distributed data. After exploring the information theoretical aspects of the test and its performance with an array of simulations, we apply it to data from the Hydrogen Epoch of Reionization Array (HERA) to assess whether different sub-seasons of observing can justifiably be combined to produce a deeper 21 cm power spectrum upper limit. We find that, with a handful of exceptions, the HERA data in question are statistically consistent and this decision is justified. We conclude by pointing out the wide applicability of this test, including to CMB experiments and the H0 tension.

Upcoming galaxy surveys and 21-cm experiments targeting high redshifts $z\gtrsim 6$ are highly complementary probes of galaxy formation and reionization. However, in order to expedite the large volume simulations relevant for 21-cm observations, many models of galaxies within reionization codes are entirely subgrid and/or rely on halo abundances only. In this work, we explore the extent to which resolving and modeling individual galaxy formation histories affects predictions both for the galaxy populations detectable by upcoming surveys and the signatures of reionization accessible to upcoming 21-cm experiments. We find that a common approach, in which galaxy luminosity is assumed to be a function of halo mass only, is biased with respect to models in which galaxy properties are evolved through time via semi-analytic modeling and thus reflective of the diversity of assembly histories that naturally arise in $N$-body simulations. The diversity of galaxy formation histories also results in scenarios in which the brightest galaxies do \textit{not} always reside in the centers of large ionized regions, as there are often relatively low-mass halos undergoing dramatic, but short-term, growth. This has clear implications for attempts to detect or validate the 21-cm background via cross correlation. Finally, we show that a hybrid approach -- in which only halos hosting galaxies bright enough to be detected in surveys are modeled in detail, with the rest modeled as an unresolved field of halos with abundance related to large-scale overdensity -- is a viable way to generate large-volume `simulations` well-suited to wide-area surveys and current-generation 21-cm experiments targeting relatively large $k \lesssim 1 \ h \ \text{Mpc}^{-1}$ scales., Comment: 17 pages, 14 figures, accepted for publication in MNRAS

Precision calibration poses challenges to experiments probing the redshifted 21-cm signal of neutral hydrogen from the Cosmic Dawn and Epoch of Reionization (z~30-6). In both interferometric and global signal experiments, systematic calibration is the leading source of error. Though many aspects of calibration have been studied, the overlap between the two types of instruments has received less attention. We investigate the sky based calibration of total power measurements with a HERA dish and an EDGES style antenna to understand the role of auto-correlations in the calibration of an interferometer and the role of sky in calibrating a total power instrument. Using simulations we study various scenarios such as time variable gain, incomplete sky calibration model, and primary beam model. We find that temporal gain drifts, sky model incompleteness, and beam inaccuracies cause biases in the receiver gain amplitude and the receiver temperature estimates. In some cases, these biases mix spectral structure between beam and sky resulting in spectrally variable gain errors. Applying the calibration method to the HERA and EDGES data, we find good agreement with calibration via the more standard methods. Although instrumental gains are consistent with beam and sky errors similar in scale to those simulated, the receiver temperatures show significant deviations from expected values. While we show that it is possible to partially mitigate biases due to model inaccuracies by incorporating a time-dependent gain model in calibration, the resulting errors on calibration products are larger and more correlated. Completely addressing these biases will require more accurate sky and primary beam models., Comment: 16 pages, 13 figures, 1 table; accepted for publication in MNRAS main journal

The reionization of the intergalactic medium at redshifts $z\gtrsim 6$ is expected to have a lasting impact on galaxies residing in low-mass dark matter halos. Unable to accrete or retain gas photo-heated to temperatures $T \gtrsim 10^4$ K, the star formation histories of faint galaxies in the early Universe are expected to decline as they exhaust their gas supply, resulting in a turn-over in the galaxy luminosity function (LF) and a potential solution to the missing satellites problem in the local group. Unfortunately, there are several challenges to constraining `reionization feedback' empirically, most notably that galaxies in low-mass halos are intrinsically faint, and that there are other physical mechanisms capable of inducing a turn-over in the LF. In this work, we investigate a new signature of reionization feedback that is in principle distinct from other processes: as faint galaxies are quenched by reionization, their stellar populations passively age and grow redder while the brighter galaxies nearby continue to form stars at an increasing rate and so remain relatively blue. We find that this contrast, between quenched and un-quenched galaxies induces a scale and colour-dependent signature in the present-day near-infrared background comparable to the expected sensitivity of NASA's upcoming SPHEREx mission. Whereas models with pure mass suppression largely affect the signal at wavelengths $\lesssim 2 \mu\rm{m}$, $\sim 5$%-level differences in the background persist out to $\sim 5 \mu\rm{m}$ for reionization feedback models. Finally, the power spectra of intensity ratio maps exhibit larger variations, and may thus be a promising target for future analyses., Comment: 13 pages, 7 figures, submitted to MNRAS

Radio Frequency Interference (RFI) is one of the systematic challenges preventing 21cm interferometric instruments from detecting the Epoch of Reionization. To mitigate the effects of RFI on data analysis pipelines, numerous inpaint techniques have been developed to restore RFI corrupted data. We examine the qualitative and quantitative errors introduced into the visibilities and power spectrum due to inpainting. We perform our analysis on simulated data as well as real data from the Hydrogen Epoch of Reionization Array (HERA) Phase 1 upper limits. We also introduce a convolutional neural network that capable of inpainting RFI corrupted data in interferometric instruments. We train our network on simulated data and show that our network is capable at inpainting real data without requiring to be retrained. We find that techniques that incorporate high wavenumbers in delay space in their modeling are best suited for inpainting over narrowband RFI. We also show that with our fiducial parameters Discrete Prolate Spheroidal Sequences (DPSS) and CLEAN provide the best performance for intermittent ``narrowband'' RFI while Gaussian Progress Regression (GPR) and Least Squares Spectral Analysis (LSSA) provide the best performance for larger RFI gaps. However we caution that these qualitative conclusions are sensitive to the chosen hyperparameters of each inpainting technique. We find these results to be consistent in both simulated and real visibilities. We show that all inpainting techniques reliably reproduce foreground dominated modes in the power spectrum. Since the inpainting techniques should not be capable of reproducing noise realizations, we find that the largest errors occur in the noise dominated delay modes. We show that in the future, as the noise level of the data comes down, CLEAN and DPSS are most capable of reproducing the fine frequency structure in the visibilities of HERA data., Comment: 21 pages, 13 figures

We present a framework for identifying and flagging malfunctioning antennas in large radio interferometers. We outline two distinct categories of metrics designed to detect outliers along known failure modes of large arrays: cross-correlation metrics, based on all antenna pairs, and auto-correlation metrics, based solely on individual antennas. We define and motivate the statistical framework for all metrics used, and present tailored visualizations that aid us in clearly identifying new and existing systematics. We implement these techniques using data from 105 antennas in the Hydrogen Epoch of Reionization Array (HERA) as a case study. Finally, we provide a detailed algorithm for implementing these metrics as flagging tools on real data sets., Comment: 31 pages, 17 figures

Precise measurements of the 21 cm power spectrum are crucial for understanding the physical processes of hydrogen reionization. Currently, this probe is being pursued by low-frequency radio interferometer arrays. As these experiments come closer to making a first detection of the signal, error estimation will play an increasingly important role in setting robust measurements. Using the delay power spectrum approach, we have produced a critical examination of different ways that one can estimate error bars on the power spectrum. We do this through a synthesis of analytic work, simulations of toy models, and tests on small amounts of real data. We find that, although computed independently, the different error bar methodologies are in good agreement with each other in the noise-dominated regime of the power spectrum. For our preferred methodology, the predicted probability distribution function is consistent with the empirical noise power distributions from both simulated and real data. This diagnosis is mainly in support of the forthcoming HERA upper limit, and also is expected to be more generally applicable., Comment: 35 Pages, 9 Figures, 4 Tables. Replaced with accepted ApJ version; some clarifying text added in response to referee comments with no changes to results

Interpreting 21cm measurements from current and upcoming experiments like HERA and the SKA will provide new scientific insights and exciting implications for astrophysics and cosmology regarding the Epoch of Reionization (EoR). Several recent works have proposed using machine learning methods, such as convolutions neural networks (CNNs), to analyze images of reionization generated by these experiments since they could take full advantage of information contained in the image. Generally, these studies have used only a single semi-numeric method to generate the input 21cm data. In this work, we investigate the extent to which training CNNs for reionization applications depends on the underlying semi-numeric models. Working in the context of predicting CMB optical depth from 21cm images, we compare networks trained on similar datasets from 21cmfast and zreion, two widely used semi-numeric reionization methods. We show that neural networks trained on input data from only one model produce poor predictions on data from the other model. Satisfactory results are only achieved when both models are included in the training data. This finding has important implications for future analyses on observation data, and encourages the use of multiple models to produce images that capture the full complexity of the EoR., Comment: 33 pages, 18 figures

We explore a new approach for extracting reionization-era contributions to the kinetic Sunyaev-Zel'dovich (kSZ) effect. Our method utilizes the cross-power spectrum between filtered and squared maps of the cosmic microwave background (CMB) and photometric galaxy surveys during the Epoch of Reionization (EoR). This kSZ$^2$-galaxy cross-power spectrum statistic has been successfully detected at lower redshifts ($z \lesssim 1.5$). Here we extend this method to $z \gtrsim 6$ as a potential means to extract signatures of patchy reionization. We model the expected signal across multiple photometric redshift bins using semi-numeric simulations of the reionization process. In principle, the cross-correlation statistic robustly extracts reionization-era contributions to the kSZ signal, while its redshift evolution yields valuable information regarding the timing of reionization. Specifically, the model cross-correlation signal near $\ell \sim 1,000$ peaks during the early stages of the EoR, when about 20% of the volume of the universe is ionized. Detectible $\ell$ modes mainly reflect squeezed triangle configurations of the related bispectrum, quantifying correlations between the galaxy overdensity field on large scales and the smaller-scale kSZ power. We forecast the prospects for detecting this signal using future wide-field samples of Lyman-break galaxies from the Roman Space Telescope and next-generation CMB surveys including the Simons Observatory, CMB-S4, and CMB-HD. We find that a roughly 13$\sigma$ detection is possible for CMB-HD and Roman after summing over all $\ell$ modes. We discuss the possibilities for improving this approach and related statistics, with the aim of moving beyond simple detections to measure the scale and redshift dependence of the cross-correlation signals., Comment: 19 pages, 12 figures, published in ApJ

In 21 cm cosmology, precision calibration is key to the separation of the neutral hydrogen signal from very bright but spectrally-smooth astrophysical foregrounds. The Hydrogen Epoch of Reionization Array (HERA), an interferometer specialized for 21 cm cosmology and now under construction in South Africa, was designed to be largely calibrated using the self-consistency of repeated measurements of the same interferometric modes. This technique, known as "redundant-baseline calibration" resolves most of the internal degrees of freedom in the calibration problem. It assumes, however, on antenna elements with identical primary beams placed precisely on a redundant grid. In this work, we review the detailed implementation of the algorithms enabling redundant-baseline calibration and report results with HERA data. We quantify the effects of real-world non-redundancy and how they compare to the idealized scenario in which redundant measurements differ only in their noise realizations. Finally, we study how non-redundancy can produce spurious temporal structure in our calibration solutions--both in data and in simulations--and present strategies for mitigating that structure., Comment: 24 Pages, 19 Figures. Updated to match the accepted MNRAS version

We introduce DAYENU, a linear, spectral filter for HI intensity mapping that achieves the desirable foreground mitigation and error minimization properties of inverse co-variance weighting with minimal modeling of the underlying data. Beyond 21 cm power-spectrum estimation, our filter is suitable for any analysis where high dynamic-range removal of spectrally smooth foregrounds in irregularly (or regularly) sampled data is required, something required by many other intensity mapping techniques. Our filtering matrix is diagonalized by Discrete Prolate Spheroidal Sequences which are an optimal basis to model band-limited foregrounds in 21 cm intensity mapping experiments in the sense that they maximally concentrate power within a finite region of Fourier space. We show that DAYENU enables the access of large-scale line-of-sight modes that are inaccessible to tapered DFT estimators. Since these modes have the largest SNRs, DAYENU significantly increases the sensitivity of 21 cm analyses over tapered Fourier transforms. Slight modifications allow us to use DAYENU as a linear replacement for iterative delay CLEANing (DAYENUREST). We refer readers to the Code section at the end of this paper for links to examples and code., Accepted to MNRAS, 19 pages, 17 figures. Replacement matches accepted version

Characterizing the epoch of reionization (EoR) at $z\gtrsim 6$ via the redshifted 21 cm line of neutral Hydrogen (HI) is critical to modern astrophysics and cosmology, and thus a key science goal of many current and planned low-frequency radio telescopes. The primary challenge to detecting this signal is the overwhelmingly bright foreground emission at these frequencies, placing stringent requirements on the knowledge of the instruments and inaccuracies in analyses. Results from these experiments have largely been limited not by thermal sensitivity but by systematics, particularly caused by the inability to calibrate the instrument to high accuracy. The interferometric bispectrum phase is immune to antenna-based calibration and errors therein, and presents an independent alternative to detect the EoR HI fluctuations while largely avoiding calibration systematics. Here, we provide a demonstration of this technique on a subset of data from the Hydrogen Epoch of Reionization Array (HERA) to place approximate constraints on the brightness temperature of the intergalactic medium (IGM). From this limited data, at $z=7.7$ we infer "$1\sigma$" upper limits on the IGM brightness temperature to be $\le 316$ "pseudo" mK at $\kappa_\parallel=0.33$ "pseudo" $h$ Mpc$^{-1}$ (data-limited) and $\le 1000$ "pseudo" mK at $\kappa_\parallel=0.875$ "pseudo" $h$ Mpc$^{-1}$ (noise-limited). The "pseudo" units denote only an approximate and not an exact correspondence to the actual distance scales and brightness temperatures. By propagating models in parallel to the data analysis, we confirm that the dynamic range required to separate the cosmic HI signal from the foregrounds is similar to that in standard approaches, and the power spectrum of the bispectrum phase is still data-limited (at $\gtrsim 10^6$ dynamic range) indicating scope for further improvement in sensitivity as the array build-out continues., Comment: 22 pages, 12 figures (including sub-figures). Published in PhRvD. Abstract may be slightly abridged compared to the actual manuscript due to length limitations on arXiv

The high-redshift 21 cm signal from the Epoch of Reionization (EoR) is a promising observational probe of the early universe. Current- and next-generation radio interferometers such as the Hydrogen Epoch of Reionization Array (HERA) and Square Kilometre Array (SKA) are projected to measure the 21 cm auto power spectrum from the EoR. Another observational signal of this era is the kinetic Sunyaev-Zel'dovich (kSZ) signal in the cosmic microwave background (CMB), which will be observed by the upcoming Simons Observatory (SO) and CMB-S4 experiments. The 21 cm signal and the contribution to the kSZ from the EoR are expected to be anti-correlated, the former coming from regions of neutral gas in the intergalactic medium and the latter coming from ionized regions. However, the naive cross-correlation between the kSZ and 21 cm maps suffers from a cancellation that occurs because ionized regions are equally likely to be moving toward or away from the observer and so there is no net correlation with the 21 cm signal. We present here an investigation of the 21 cm-kSZ-kSZ bispectrum, which should not suffer the same cancellation as the simple two-point cross-correlation. We show that there is a significant and non-vanishing signal that is sensitive to the reionization history, suggesting the statistic may be used to confirm or infer the ionization fraction as a function of redshift. In the absence of foreground contamination, we forecast that this signal is detectable at high statistical significance with HERA and SO. The bispectrum we study suffers from the fact that the kSZ signal is sensitive only to Fourier modes with long-wavelength line-of-sight components, which are generally lost in the 21 cm data sets owing to foreground contamination. We discuss possible strategies for alleviating this contamination, including an alternative four-point statistic that may help circumvent this issue., Comment: 24 pages, 13 figures

We analyze data from the Hydrogen Epoch of Reionization Array. This is the third in a series of papers on the closure phase delay-spectrum technique designed to detect the HI 21cm emission from cosmic reionization. We present the details of the data and models employed in the power spectral analysis, and discuss limitations to the process. We compare images and visibility spectra made with HERA data, to parallel quantities generated from sky models based on the GLEAM survey, incorporating the HERA telescope model. We find reasonable agreement between images made from HERA data, with those generated from the models, down to the confusion level. For the visibility spectra, there is broad agreement between model and data across the full band of $\sim 80$MHz. However, models with only GLEAM sources do not reproduce a roughly sinusoidal spectral structure at the tens of percent level seen in the observed visibility spectra on scales $\sim 10$ MHz on 29 m baselines. We find that this structure is likely due to diffuse Galactic emission, predominantly the Galactic plane, filling the far sidelobes of the antenna primary beam. We show that our current knowledge of the frequency dependence of the diffuse sky radio emission, and the primary beam at large zenith angles, is inadequate to provide an accurate reproduction of the diffuse structure in the models. We discuss implications due to this missing structure in the models, including calibration, and in the search for the HI 21cm signal, as well as possible mitigation techniques., Comment: 17 pages, 10 figures, accepted for the ApJ Supplement

We present a study of internal reflection and cross-coupling systematics in Phase I of the Hydrogen Epoch of Reionization Array (HERA). In a companion paper, we outlined the mathematical formalism for such systematics and presented algorithms for modeling and removing them from the data. In this work, we apply these techniques to data from HERA’s first observing season as a method demonstration. The data show evidence for systematics that, without removal, would hinder a detection of the 21 cm power spectrum for the targeted Epoch of Reionization (EoR) line-of-sight modes in the range 0.2 h -1 Mpc-1 < {k}\parallel < 0.5 h -1 Mpc-1. In particular, we find evidence for nonnegligible amounts of spectral structure in the raw autocorrelations that overlaps with the EoR window and is suggestive of complex instrumental effects. Through systematic modeling on a single night of data, we find we can recover these modes in the power spectrum down to the integrated noise floor, achieving a dynamic range in the EoR window of 106 in power (mK2 units) with respect to the bright galactic foreground signal. Future work with deeper integrations will help determine whether these systematics can continue to be mitigated down to EoR levels. For future observing seasons, HERA will have upgraded analog and digital hardware to better control these systematics in the field.

Radio Frequency Interference (RFI) is an ever-present limiting factor among radio telescopes even in the most remote observing locations. When looking to retain the maximum amount of sensitivity and reduce contamination for Epoch of Reionization studies, the identification and removal of RFI is especially important. In addition to improved RFI identification, we must also take into account computational efficiency of the RFI-Identification algorithm as radio interferometer arrays such as the Hydrogen Epoch of Reionization Array grow larger in number of receivers. To address this, we present a Deep Fully Convolutional Neural Network (DFCN) that is comprehensive in its use of interferometric data, where both amplitude and phase information are used jointly for identifying RFI. We train the network using simulated HERA visibilities containing mock RFI, yielding a known "ground truth" dataset for evaluating the accuracy of various RFI algorithms. Evaluation of the DFCN model is performed on observations from the 67 dish build-out, HERA-67, and achieves a data throughput of 1.6$\times 10^{5}$ HERA time-ordered 1024 channeled visibilities per hour per GPU. We determine that relative to an amplitude only network including visibility phase adds important adjacent time-frequency context which increases discrimination between RFI and Non-RFI. The inclusion of phase when predicting achieves a Recall of 0.81, Precision of 0.58, and $F_{2}$ score of 0.75 as applied to our HERA-67 observations., Comment: 11 pages, 7 figures

The detection of the Epoch of Reionization (EoR) delay power spectrum using a "foreground avoidance method" highly depends on the instrument chromaticity. The systematic effects induced by the radio-telescope spread the foreground signal in the delay domain, which contaminates the EoR window theoretically observable. Applied to the Hydrogen Epoch of Reionization Array (HERA), this paper combines detailed electromagnetic and electrical simulations in order to model the chromatic effects of the instrument, and quantify its frequency and time responses. In particular, the effects of the analogue receiver, transmission cables, and mutual coupling are included. These simulations are able to accurately predict the intensity of the reflections occurring in the 150-m cable which links the antenna to the back-end. They also show that electromagnetic waves can propagate from one dish to another one through large sections of the array due to mutual coupling. The simulated system time response is attenuated by a factor $10^{4}$ after a characteristic delay which depends on the size of the array and on the antenna position. Ultimately, the system response is attenuated by a factor $10^{5}$ after 1400 ns because of the reflections in the cable, which corresponds to characterizable ${k_\parallel}$-modes above 0.7 $h\;\rm{Mpc}^{-1}$ at 150 MHz. Thus, this new study shows that the detection of the EoR signal with HERA Phase I will be more challenging than expected. On the other hand, it improves our understanding of the telescope, which is essential to mitigate the instrument chromaticity., Comment: 13 pages, 17 figures - Submitted to MNRAS - 2nd revision

Upcoming measurements of the high-redshift 21 cm signal from the Epoch of Reionization (EoR) are a promising probe of the astrophysics of the first galaxies and of cosmological parameters. In particular, the optical depth τ to the last scattering surface of the cosmic microwave background (CMB) should be tightly constrained by direct measurements of the neutral hydrogen state at high redshift. A robust measurement of τ from 21 cm data would help eliminate it as a nuisance parameter from CMB estimates of cosmological parameters. Previous proposals for extracting τ from future 21 cm data sets have typically used the 21 cm power spectra generated by semi-numerical models to reconstruct the reionization history. We present here a different approach which uses convolution neural networks (CNNs) trained on mock images of the 21 cm EoR signal to extract τ. We construct a CNN that improves upon on previously proposed architectures, and perform an automated hyperparameter optimization. We show that well-trained CNNs are able to accurately predict τ, even when removing Fourier modes that are expected to be corrupted by bright foreground contamination of the 21 cm signal. Typical random errors for an optimized network are less than 3.06%, with biases factors of several smaller. While preliminary, this approach could yield constraints on τ that improve upon sample-variance limited measurements of the low-ℓ EE observations of the CMB, making this approach a valuable complement to more traditional methods of inferring τ.

The central challenge in 21~cm cosmology is isolating the cosmological signal from bright foregrounds. Many separation techniques rely on the accurate knowledge of the sky and the instrumental response, including the antenna primary beam. For drift-scan telescopes such as the Hydrogen Epoch of Reionization Array \citep[HERA, ][]{DeBoer2017} that do not move, primary beam characterization is particularly challenging because standard beam-calibration routines do not apply \citep{Cornwell2005} and current techniques require accurate source catalogs at the telescope resolution. We present an extension of the method from \citet{Pober2012} where they use beam symmetries to create a network of overlapping source tracks that break the degeneracy between source flux density and beam response and allow their simultaneous estimation. We fit the beam response of our instrument using early HERA observations and find that our results agree well with electromagnetic simulations down to a -20~dB level in power relative to peak gain for sources with high signal-to-noise ratio. In addition, we construct a source catalog with 90 sources down to a flux density of 1.4~Jy at 151~MHz., 22 pages, 22 figures, accepted for publication in ApJ

Foreground power dominates the measurements of interferometers that seek a statistical detection of highly-redshifted HI emission from the Epoch of Reionization (EoR). The chromaticity of the instrument creates a boundary in the Fourier transform of frequency (proportional to $k_\parallel$) between spectrally smooth emission, characteristic of the strong synchrotron foreground (the "wedge"), and the spectrally structured emission from HI in the EoR (the "EoR window"). Faraday rotation can inject spectral structure into otherwise smooth polarized foreground emission, which through instrument effects or miscalibration could possibly pollute the EoR window. Using data from the HERA 19-element commissioning array, we investigate the polarization response of this new instrument in the power spectrum domain. We perform a simple image-based calibration based on the unpolarized diffuse emission of the Global Sky Model, and show that it achieves qualitative redundancy between the nominally-redundant baselines of the array and reasonable amplitude accuracy. We construct power spectra of all fully polarized coherencies in all pseudo-Stokes parameters. We compare to simulations based on an unpolarized diffuse sky model and detailed electromagnetic simulations of the dish and feed, confirming that in Stokes I, the calibration does not add significant spectral structure beyond the expected level. Further, this calibration is stable over the 8 days of observations considered. Excess power is seen in the power spectra of the linear polarization Stokes parameters which is not easily attributable to leakage via the primary beam, and results from some combination of residual calibration errors and actual polarized emission. Stokes V is found to be highly discrepant from the expectation of zero power, strongly pointing to the need for more accurate polarized calibration., Comment: 21 pages, 12 figures, submitted to ApJ

Next-generation 21cm observations will enable imaging of reionization on very large scales. These images will contain more astrophysical and cosmological information than the power spectrum, and hence providing an alternative way to constrain the contribution of different reionizing sources populations to cosmic reionization. Using Convolutional Neural Networks, we present a simple network architecture that is sufficient to discriminate between Galaxy-dominated versus AGN-dominated models, even in the presence of simulated noise from different experiments such as the HERA and SKA., Contributed talk for the IAU Symposium 333 "Peering towards Cosmic Dawn", Dubrovnik, October 2-6, 2017; to appear in the proceedings, eds. Vibor Jelic and Thijs van der Hulst [5 pages, 3 figures]

The Epoch of Reionization (EoR) features a rich interplay between the first luminous sources and the low-density gas of the intergalactic medium (IGM), where photons from these sources ionize the IGM. There are currently few observational constraints on key observables related to the EoR, such as the midpoint and duration of reionization. Although upcoming observations of the 21 cm power spectrum with next-generation radio interferometers such as the Hydrogen Epoch of Reionization Array (HERA) and the Square Kilometre Array (SKA) are expected to provide information about the midpoint of reionization readily, extracting the duration from the power spectrum alone is a more difficult proposition. As an alternative method for extracting information about reionization, we present an application of convolutional neural networks (CNNs) to images of reionization. These images are two-dimensional in the plane of the sky, and extracted at a series of redshift values to generate "image cubes" that are qualitatively similar to those of the HERA and the SKA will generate in the near future. Additionally, we include the impact that the bright foreground signal from the the Milky Way imparts on such image cubes from interferometers, but do not include the noise induced from observations. We show that we are able to recover the duration of reionization $\Delta$z to within 5% using CNNs, assuming that the midpoint of reionization is already relatively well constrained. These results have exciting impacts for estimating $\tau$, the optical depth to the cosmic microwave background, which can help constrain other cosmological parameters., Comment: 11 pages, 7 figures, published at ApJ

We have run a new suite of simulations that solve hydrodynamics and radiative transfer simultaneously to study helium II reionization. Our suite of simulations employs various models for populating quasars inside of dark matter halos, which affect the He II reionization history. In particular, we are able to explore the impact that differences in the timing and duration of reionization have on observables. We examine the thermal signature that reionization leaves on the IGM, and measure the temperature-density relation. As previous studies have shown, we confirm that the photoheating feedback from helium II reionization raises the temperature of the IGM by several thousand kelvin. To compare against observations, we generate synthetic Ly$\alpha$ forest sightlines on-the-fly and match the observed effective optical depth $\tau_{\mathrm{eff}}(z)$ of hydrogen to recent observations. We show that when the simulations have been normalized to have the same values of $\tau_\mathrm{eff}$, the effect that helium II reionization has on observations of the hydrogen Ly$\alpha$ forest is minimal. Specifically, the flux PDF and the one-dimensional power spectrum are sensitive to the thermal state of the IGM, but do not show direct evidence for the ionization state of helium. We show that the peak temperature of the IGM typically corresponds to the time of 90%-95% helium ionization by volume, and is a relatively robust indicator of the timing of reionization. Future observations of helium reionization from the hydrogen Ly$\alpha$ forest should thus focus on measuring the temperature of the IGM, especially at mean density. Detecting the peak in the IGM temperature would provide valuable information about the timing of the end of helium II reionization., Comment: 25 pages, 17 figures; published in ApJ

We present predictions for the 21 cm brightness temperature power spectrum during the Epoch of Reionization (EoR). We discuss the implications of the "light cone" effect, which incorporates evolution of the neutral hydrogen fraction and 21 cm brightness temperature along the line of sight. Using a novel method calibrated against radiation-hydrodynamic simulations, we model the neutral hydrogen density field and 21 cm signal in large volumes ($L = 2$ Gpc/$h$). The inclusion of the light cone effect leads to a relative decrease of about 50% in the 21 cm power spectrum on all scales. We also find that the effect is more prominent at the midpoint of reionization and later. The light cone effect also can introduce an anisotropy along the line of sight. By decomposing the 3D power spectrum into components perpendicular to and along the line of sight, we find that in our fiducial reionization model, there is no significant anisotropy. However, parallel modes can contribute up to 40% more power for shorter reionization scenarios. The scales on which the light cone effect is relevant are comparable to scales where one measures the baryon acoustic oscillation. We argue that due to its large comoving scale and introduction of anisotropy, the light cone effect is important when considering redshift space distortions and future application to the Alcock-Paczynski test for the determination of cosmological parameters., Comment: 20 pages, 14 figures

We introduce a new project to understand helium reionization using fully coupled $N$-body, hydrodynamics, and radiative transfer simulations. This project aims to capture correctly the thermal history of the intergalactic medium (IGM) as a result of reionization and make predictions about the Lyman-$\alpha$ forest and baryon temperature-density relation. The dominant sources of radiation for this transition are quasars, so modeling the source population accurately is very important for making reliable predictions. In this first paper, we present a new method for populating dark matter halos with quasars. Our set of quasar models include two different light curves, a lightbulb (simple on/off) and symmetric exponential model, and luminosity-dependent quasar lifetimes. Our method self-consistently reproduces an input quasar luminosity function (QLF) given a halo catalog from an $N$-body simulation, and propagates quasars through the merger history of halo hosts. After calibrating quasar clustering using measurements from BOSS, we find that the characteristic mass of quasar hosts is $M_h \sim 2.5 \times 10^{12} M_\odot$ $h^{-1}$ for the lightbulb model, and $M_h \sim 2.3 \times 10^{12} M_\odot$ $h^{-1}$ for the exponential model. In the exponential model, the peak quasar luminosity for a given halo mass is larger than that in the lightbulb model, typically by a factor of 1.5-2. The effective lifetime for quasars in the lightbulb model is 59 Myr, and in the exponential case, the effective time constant is about 15 Myr. We include semi-analytic calculations of helium reionization, and discuss how to include these quasars as sources of ionizing radiation for full hydrodynamics with radiative transfer simulations in order to study helium reionization., Comment: 18 pages, 12 figures. Updated for ApJ version. For a video summary of the paper, visit: https://www.youtube.com/watch?v=sGGtjetxjnk