677 results on '"Whitten P"'
Search Results
2. An AI Architecture with the Capability to Explain Recognition Results
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Whitten, Paul, Wolff, Francis, and Papachristou, Chris
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Computer Science - Machine Learning - Abstract
Explainability is needed to establish confidence in machine learning results. Some explainable methods take a post hoc approach to explain the weights of machine learning models, others highlight areas of the input contributing to decisions. These methods do not adequately explain decisions, in plain terms. Explainable property-based systems have been shown to provide explanations in plain terms, however, they have not performed as well as leading unexplainable machine learning methods. This research focuses on the importance of metrics to explainability and contributes two methods yielding performance gains. The first method introduces a combination of explainable and unexplainable flows, proposing a metric to characterize explainability of a decision. The second method compares classic metrics for estimating the effectiveness of neural networks in the system, posing a new metric as the leading performer. Results from the new methods and examples from handwritten datasets are presented.
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- 2024
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3. Anti-Queer Policy & Rural Schools: A Framework to Analyze Anti-Queer Policy Implementation in Rural Schools
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Whitten, Clint and Thomas, Courtney
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There are more than 300 anti-Queer policies that are being proposed and implemented across the nation that impact education, including Tennessee's Senate Bill 1229; Virginia's "2022 Model Policies on the Privacy, Dignity, and Respect for all Students and Parents in Virginia's Public Schools;" and Florida's "Parental Rights in Education Bill" CS/CS/HB 1557, expanded April 2023, which prohibits topics of gender and sexuality in K-12 public education, unless related to reproductive health lessons. This policy brief offers a critique of three assumptions that can be applied to analyze how anti-Queer policies influence Queerness in rural schools. Those assumptions are: (1) Does the policy make assumptions on one type of parent? (2) How does the policy define gender and sexual identities? and (3) Will the policy erase rural queer educators and students?
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- 2023
4. The human factor: results of a small-angle scattering data analysis Round Robin
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Pauw, Brian R., Smales, Glen J., Anker, Andy S., Balazs, Daniel M., Beyer, Frederick L., Bienert, Ralf, Bouwman, Wim G., Breßler, Ingo, Breternitz, Joachim, Brok, Erik S, Bryant, Gary, Clulow, Andrew J., Crater, Erin R., De Geuser, Frédéric, Del Giudice, Alessandra, Deumer, Jérôme, Disch, Sabrina, Dutt, Shankar, Frank, Kilian, Fratini, Emiliano, Gilbert, Elliot P., Hahn, Marc Benjamin, Hallett, James, Hohenschutz, Max, Hollamby, Martin, Huband, Steven, Ilavsky, Jan, Jochum, Johanna K., Juelsholt, Mikkel, Mansel, Bradley W., Penttilä, Paavo, Pittkowski, Rebecca K., Portale, Giuseppe, Pozzo, Lilo D., Garcia, Paulo Ricardo de Abreu Furtado, Rochels, Leonhard, Rosalie, Julian M., Saloga, Patrick E. J., Seibt, Susanne, Smith, Andrew J., Smith, Gregory N., Annadurai, Venkatasamy, Spiering, Glenn A., Stawski, Tomasz M., Taché, Olivier, Thünemann, Andreas F., Toth, Kristof, Whitten, Andrew E., and Wuttke, Joachim
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Physics - Data Analysis, Statistics and Probability ,Condensed Matter - Materials Science ,Physics - Applied Physics - Abstract
A Round Robin study has been carried out to estimate the impact of the human element in small-angle scattering data analysis. Four corrected datasets were provided to participants ready for analysis. All datasets were measured on samples containing spherical scatterers, with two datasets in dilute dispersions, and two from powders. Most of the 46 participants correctly identified the number of populations in the dilute dispersions, with half of the population mean entries within 1.5% and half of the population width entries within 40%, respectively. Due to the added complexity of the structure factor, much fewer people submitted answers on the powder datasets. For those that did, half of the entries for the means and widths were within 44% and 86% respectively. This Round Robin experiment highlights several causes for the discrepancies, for which solutions are proposed., Comment: 23 pages, 10 figures. For the original information sent to RR participants, see https://zenodo.org/record/7506365 . For the anonymized results and Jupyter notebook for analysis, see https://zenodo.org/record/7509710
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- 2023
5. Deconvoluting XPS Spectra of La-Containing Perovskites from First-Principles
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Ariel Whitten, Dezhou Guo, Elif Tezel, Reinhard Denecke, Eranda Nikolla, and Jean-Sabin McEwen
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Chemistry ,QD1-999 - Published
- 2024
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6. Harnessing electronic health record data for improving delivery of acute renal replacement therapy in Alberta, Canada (Dialyzing Wisely)
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Kristin Robertson, Sheena Morton, Lindsay Dasilva, Tara Whitten, Melissa Gardiner, Sarah Seymour, Dawn Opgenorth, and Oleksa Rewa
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Demography. Population. Vital events ,HB848-3697 - Abstract
Objective Acute renal replacement therapy (RRT) is an important life saving technology used in critical care. However, variation in clinical practice for initiation and maintenance of RRT can increase healthcare costs and worsen patient outcomes. In Alberta, Canada, a province-wide electronic health record provides a unique opportunity to measure and evaluate clinical practice. The present study aims to improve the quality of RRT delivery in Alberta critical care units by providing feedback on key performance indicators (KPIs) for RRT based on current evidence. Approach KPIs for RRT included an initiation pathway based on threshold lab values, and measures of RRT quality such as the time from order to treatment initiation, the average life of dialysis filters, and the actual vs. prescribed fluid removal. Clinical KPI definitions were mapped to data available in the electronic health record to evaluate current practice and track changes in KPIs over time. Results Mapping the clinical guidelines to the electronic health record took significant time and effort in a large team with expertise on both the data and clinical sides. Each KPI data definition went through several cycles of development, validation and refinement before being included in the dashboards and reports given to participating sites. Conclusions Providing accurate data on RRT ordering and delivery practices is an important step in aligning acute RRT delivery with current best practice, ultimately improving the quality of care and reducing unnecessary costs. Implications Electronic health records provide a powerful tool for evaluating clinical decisions and implementing best practice guidelines.
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- 2024
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7. Uncharted territory in linking population-based laboratory data for the epidemiology of celiac disease in Canada
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James King, Tara Whitten, Bing Li, Erik Youngson, Jeffrey Bakal, Gilaad Kaplan, and Tyler Williamson
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Demography. Population. Vital events ,HB848-3697 - Abstract
Introduction We previously investigated the frequency of screening for celiac disease (CD) based on tissue transglutaminase antibody testing (tTG-IgA) and developed the first incident cohort of celiac autoimmunity in Canada. Methods Administrative data sources used in this study were population-based and covered the entire province of Alberta (~4.3M residents during study period). Various approaches to querying data were employed within a diverse team of health information managers, data analysts, clinical scientists, and gastroenterologists. This process involved a broad search for CD screening tests, thorough data inspection/cleaning, and numerous discussions to determine potential explanations for the findings. Results Approximately ~950,000 records for tTG-IgA were first identified. Records were then excluded due to missing/invalid patient identifiers or test results (0.8%), non-Alberta residency (0.4%), and duplicate records (1.1%). A final dataset included ~920,000 tTG-IgA tests on ~680,000 unique patients, which was also validated through a separate query performed by an analyst external to the study team. A conservative approach to excluding as many potential prevalent cases of CD was applied given a robust algorithm for CD has not yet been established in Canada. The final rate of celiac autoimmunity (34 per 100,000) offered further face validity based on prior estimates of diagnosed CD in Alberta and other countries reporting on celiac autoimmunity. Conclusion When developing a novel case definition or investigating unfamiliar outcomes using routinely collected data, collaboration across several disciplines is highly recommended. Certain stages of the project may require additional scrutiny and discussion to ensure findings are valid and reliable.
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- 2024
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8. Invasive Round goby Neogobius melanostomus distribution, relative abundance, and establishment in pools of the Illinois Waterway following 30 years of invasion
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Brandon S. Harris, Michael J. Spear, Andrya L. Whitten, Eric C. Hine, Allison W. Lenaerts, Andrew T. Mathis, Kristopher A. Maxson, Madison Myers, Melissa Oubre, Samuel J. Schaick, Levi E. Solomon, Andrew T. Wieland, Jesse A. Williams, and James T. Lamer
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Invasive species ,round goby Neogobius melanostomus ,long-term monitoring ,large river ,Mississippi River basin ,Environmental sciences ,GE1-350 ,Ecology ,QH540-549.5 - Abstract
AbstractRound goby Neogobius melanostomus – a small, benthic fish native to Eurasia – was first introduced to North America in the 1980s through ballast water of cargo ships. In 1990, the Round goby was first discovered in the Laurentian Great Lakes Basin and rapidly spread through all Great Lakes from 1993 to 1998. The Round goby is an aggressive, prolific, and efficient egg predator that subsequently displaced native fishes from their preferred habitats and resources in the Great Lakes, where they are well established and abundant. From Lake Michigan, Round goby moved south into the Chicago Area Waterway System in 1993 and slowly progressed down the Illinois Waterway to the Mississippi River from 2004 to 2019, where less is known about their abundance, establishment, and impact. The goal of this study was to gain a comprehensive understanding of the first large river invasion by Round goby in the Mississippi River Basin by leveraging Round goby capture data from 2019 to 2022 on all pools of the Illinois Waterway. We describe their current distribution, relative abundance (i.e., catch-per-unit-effort), frequency of occurrence, and establishment (i.e., presence of young-of-year and adults) status throughout the Illinois Waterway. Results show that catch-per-unit-effort, frequency of occurrence, and the proportion of sites where multiple life stages are present are considerably higher in the upstream pools relative to more downstream pools of the Illinois Waterway. Our data support that the Round goby has established self-sustaining populations in the Chicago Area Waterway System, the upper Illinois River (i.e. Dresden Island Pool downstream through Starved Rock Pool), and a portion of the lower Illinois River (i.e. Peoria Pool downstream through Alton Pool) of the Illinois Waterway. In the lower Illinois River, Round gobies appear to only be established in Peoria Pool, with captures occurring infrequently in La Grange Pool, and no Round gobies being captured in Alton Pool.
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- 2024
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9. Structural basis underlying the synergism of NADase and SLO during group A Streptococcus infection
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Tsai, Wei-Jiun, Lai, Yi-Hsin, Shi, Yong-An, Hammel, Michal, Duff, Anthony P, Whitten, Andrew E, Wilde, Karyn L, Wu, Chun-Ming, Knott, Robert, Jeng, U-Ser, Kang, Chia-Yu, Hsu, Chih-Yu, Wu, Jian-Li, Tsai, Pei-Jane, Chiang-Ni, Chuan, Wu, Jiunn-Jong, Lin, Yee-Shin, Liu, Ching-Chuan, Senda, Toshiya, and Wang, Shuying
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Medical Microbiology ,Biomedical and Clinical Sciences ,Biological Sciences ,Foodborne Illness ,Dental/Oral and Craniofacial Disease ,Infectious Diseases ,Aetiology ,2.2 Factors relating to the physical environment ,Infection ,Humans ,Animals ,Mice ,Streptococcus ,Streptolysins ,Bacterial Proteins ,NAD+ Nucleosidase ,Biological sciences ,Biomedical and clinical sciences - Abstract
Group A Streptococcus (GAS) is a strict human pathogen possessing a unique pathogenic trait that utilizes the cooperative activity of NAD+-glycohydrolase (NADase) and Streptolysin O (SLO) to enhance its virulence. How NADase interacts with SLO to synergistically promote GAS cytotoxicity and intracellular survival is a long-standing question. Here, the structure and dynamic nature of the NADase/SLO complex are elucidated by X-ray crystallography and small-angle scattering, illustrating atomic details of the complex interface and functionally relevant conformations. Structure-guided studies reveal a salt-bridge interaction between NADase and SLO is important to cytotoxicity and resistance to phagocytic killing during GAS infection. Furthermore, the biological significance of the NADase/SLO complex in GAS virulence is demonstrated in a murine infection model. Overall, this work delivers the structure-functional relationship of the NADase/SLO complex and pinpoints the key interacting residues that are central to the coordinated actions of NADase and SLO in the pathogenesis of GAS infection.
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- 2023
10. Queerly Rural, Rurally Queer
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Josh Thompson and Clint Whitten
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rural ,queer ,young adult ,English Language Arts ,literacy ,pedagogy ,Education ,Literature (General) ,PN1-6790 - Abstract
Recently, the number of books featuring both queer and rural youth experiences has increased (Kedley et al., 2022), including Jamison’s (2021) Hillbilly Queer: A Memoir. The present study examined how this book functions as a memoir about young adult experiences and analyzed the possibilities it offers rural queer students as well as rural and/or queer educators. Through a queer autoethnographic literary analysis, the authors draw upon their experiences as once closeted rural queer youth and former openly queer secondary English language arts educators teaching in rural and rural-serving public schools. This study found important benefits for rural queer adolescents and significant implications for the English language arts classroom.
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- 2024
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11. Correction of Residual Errors in Configuration Interaction Electronic Structure Calculations
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Whitten, Jerry L.
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Physics - Chemical Physics - Abstract
Methods for correcting residual energy errors of configuration interaction (CI) calculations of molecules and other electronic systems are discussed based on the assumption that the energy defect can be mapped onto atomic regions. The methods do not consider the detailed nature of excitations, but instead define a defect energy per electron that that is unique to a specific atom. Defect energy contributions are determined from calculations on diatomic and hydride molecules and then applied to other systems. Calculated energies are compared with experimental thermodynamic and spectroscopic data for a set of forty-one mainly organic molecules representing a wide range of bonding environments. The most stringent test is based on a severely truncated virtual space in which higher spherical harmonic basis functions are removed. The errors of the initial CI calculations are large, but in each case, including defect corrections brings calculated CI energies into agreement with experimental values. The method is also applied to a NIST compilation of coupled-cluster calculations that employ a larger basis set and no truncation of the virtual space. The corrections show excellent consistency with total energies in very good agreement with experimental values. An extension of the method is applied to dmsn states of Sc, Ti, V, Mn, Cr, Fe, Co, Ni and Cu, significantly improving the agreement of calculated transition energies with spectroscopic values., Comment: 27 pages, 2 figures
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- 2022
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12. Geologic context of the bright MARSIS reflectors in Ultimi Scopuli, South Polar Layered Deposits, Mars
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Landis, M. E. and Whitten, J. L.
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Astrophysics - Earth and Planetary Astrophysics ,Physics - Geophysics - Abstract
Radar-bright basal reflectors have been detected below the South Polar Layered Deposits (SPLD), Mars using Advanced Radar for Subsurface and Ionosphere Sounding (MARSIS) data and have an exciting but controversial interpretation: liquid water from subglacial lakes. We mapped the surface of the SPLD immediately above and surrounding the putative lakes (1:2M map scale) in order to provide geologic context for interpretation of the bright basal reflectors. We use THEMIS daytime IR (100 m/pixel), CTX (6 m/pixel), and HiRISE (25 cm/pixel) data to characterize geologic units and typical surface roughness. We find evidence for multiple geologic units with features due to CO2 and aeolian-related processes. We do not find evidence for surface modification linked to the postulated lake locations. This is not consistent with the interpretation of the MARSIS basal radar reflector as subglacial lakes., Comment: 29 pages, 2 figures (main paper), 4 (supplement), accepted 4/29/2022 at Geophysical Research Letters
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- 2022
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13. A round‐robin approach provides a detailed assessment of biomolecular small‐angle scattering data reproducibility and yields consensus curves for benchmarking
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Trewhella, Jill, Vachette, Patrice, Bierma, Jan, Blanchet, Clement, Brookes, Emre, Chakravarthy, Srinivas, Chatzimagas, Leonie, Cleveland, Thomas E, Cowieson, Nathan, Crossett, Ben, Duff, Anthony P, Franke, Daniel, Gabel, Frank, Gillilan, Richard E, Graewert, Melissa, Grishaev, Alexander, Guss, J Mitchell, Hammel, Michal, Hopkins, Jesse, Huang, Qingqui, Hub, Jochen S, Hura, Greg L, Irving, Thomas C, Jeffries, Cy Michael, Jeong, Cheol, Kirby, Nigel, Krueger, Susan, Martel, Anne, Matsui, Tsutomu, Li, Na, Pérez, Javier, Porcar, Lionel, Prangé, Thierry, Rajkovic, Ivan, Rocco, Mattia, Rosenberg, Daniel J, Ryan, Timothy M, Seifert, Soenke, Sekiguchi, Hiroshi, Svergun, Dmitri, Teixeira, Susana, Thureau, Aurelien, Weiss, Thomas M, Whitten, Andrew E, Wood, Kathleen, and Zuo, Xiaobing
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Biochemistry and Cell Biology ,Physical Sciences ,Biological Sciences ,Bioengineering ,Scattering ,Small Angle ,X-Ray Diffraction ,Benchmarking ,Consensus ,Reproducibility of Results ,Proteins ,Solvents ,X-ray scattering ,benchmarking standards ,biomolecular small-angle scattering ,neutron scattering ,scattering-profile calculation ,standards ,Chemical Sciences ,Biophysics ,Biological sciences ,Chemical sciences ,Physical sciences - Abstract
Through an expansive international effort that involved data collection on 12 small-angle X-ray scattering (SAXS) and four small-angle neutron scattering (SANS) instruments, 171 SAXS and 76 SANS measurements for five proteins (ribonuclease A, lysozyme, xylanase, urate oxidase and xylose isomerase) were acquired. From these data, the solvent-subtracted protein scattering profiles were shown to be reproducible, with the caveat that an additive constant adjustment was required to account for small errors in solvent subtraction. Further, the major features of the obtained consensus SAXS data over the q measurement range 0-1 Å-1 are consistent with theoretical prediction. The inherently lower statistical precision for SANS limited the reliably measured q-range to 2.2 Å-1 showed good mutual agreement, affirming that this region has interpretable features for structural modelling. SAS measurements with inline size-exclusion chromatography (SEC) proved to be generally superior for eliminating sample heterogeneity, but with unavoidable sample dilution during column elution, while batch SAS data collected at higher concentrations and for longer times provided superior statistical precision. Careful merging of data measured using inline SEC and batch modes, or low- and high-concentration data from batch measurements, was successful in eliminating small amounts of aggregate or interparticle interference from the scattering while providing improved statistical precision overall for the benchmarking data set.
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- 2022
14. Trajectory Planning with Deep Reinforcement Learning in High-Level Action Spaces
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Williams, Kyle R., Schlossman, Rachel, Whitten, Daniel, Ingram, Joe, Musuvathy, Srideep, Patel, Anirudh, Pagan, James, Williams, Kyle A., Green, Sam, Mazumdar, Anirban, and Parish, Julie
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Electrical Engineering and Systems Science - Systems and Control - Abstract
This paper presents a technique for trajectory planning based on continuously parameterized high-level actions (motion primitives) of variable duration. This technique leverages deep reinforcement learning (Deep RL) to formulate a policy which is suitable for real-time implementation. There is no separation of motion primitive generation and trajectory planning: each individual short-horizon motion is formed during the Deep RL training to achieve the full-horizon objective. Effectiveness of the technique is demonstrated numerically on a well-studied trajectory generation problem and a planning problem on a known obstacle-rich map. This paper also develops a new loss function term for policy-gradient-based Deep RL, which is analogous to an anti-windup mechanism in feedback control. We demonstrate the inclusion of this new term in the underlying optimization increases the average policy return in our numerical example.
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- 2021
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15. The Acceptability of a Community-Based Perturbation-Based Balance Training to Older Adults and Healthcare Professionals
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Justin Whitten MS, Bryant O’Leary MS, David Graham PhD, Michelle Grocke-Dewey PhD, Julie Riley MBA, Danielle Harper BS, and Dawn Tarabochia PhD
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Geriatrics ,RC952-954.6 - Abstract
Background: Perturbation-based balance training (PBT) is a promising fall risk reduction method that involves inducing unexpected perturbations to balance to train participants reactive balance control. Due to the unpredictable nature of PBT, its acceptability to older adults could present a barrier to the implementation of PBT in the community. Aim/Purpose: The purpose of this study was to assess the perceived acceptability of a community-based PBT program to both older adults and healthcare professionals (HCPs). Methods: Nineteen older adults (aged 69.6 ± 6.6 years, 17 women, 2 men) and three HCPs participated in the qualitative study. Participants completed four PBT sessions facilitated in conjunction with HCPs. Interviews, based on the theoretical framework of acceptability, were conducted before and after PBT and analyzed using template analysis. Results: PBT was perceived as effective by older adults and HCPs. However, HCPs perceived the equipment cost as a substantial barrier to feasibility in the community.
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- 2024
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16. Symptomology following COVID-19 among adults in Alberta, Canada: an observational survey study
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Colleen Norris, Chester Ho, Jeffrey Bakal, Xueyi Chen, Tara Whitten, and Balraj Mann
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Medicine - Abstract
Objective Fatigue, headache, problems sleeping and numerous other symptoms have been reported to be associated with long COVID. However, many of these symptoms coincide with symptoms reported by the general population, possibly exacerbated by restrictions/precautions experienced during the COVID-19 pandemic. This study examines the symptoms reported by individuals who tested positive for COVID-19 compared with those who tested negative.Design Observational study.Setting The study was conducted on adult residents in Alberta, Canada, from October 2021 to February 2023.Participants We evaluated self-reported symptoms in 7623 adults with positive COVID-19 tests and 1520 adults who tested negative, using surveys adapted from the internationally standardised International Severe Acute Respiratory and emerging Infection Consortium (ISARIC)-developed COVID-19 long-term follow-up tools. These individuals had an index COVID-19 test date between 1 March 2020 and 31 December 2022 and were over 28 days post-COVID-19 testing.Primary outcome measures The primary outcomes were to identify the symptoms associated with COVID-19 positivity and risk factors for reporting symptoms.Results Fatigue was the top reported symptom (42%) among COVID-19-positive respondents, while headache was the top reported symptom (32%) in respondents who tested negative. Compared with those who tested negative, COVID-19-positive individuals reported 1.5 times more symptoms and had higher odds of experiencing 31 out of the 40 listed symptoms during the postinfectious period. These symptoms included olfactory dysfunction, menstruation changes, cardiopulmonary and neurological symptoms. Female sex, middle age (41–55 years), Indigeneity, unemployment, hospital/intensive care unit (ICU) admission at the time of testing and pre-existing health conditions independently predicted a greater number and variety of symptoms.Conclusions Our results provide evidence that COVID-19 survivors continue to experience a significant number and variety of symptoms. These findings can help inform targeted strategies for the unequally affected population. It is important to offer appropriate management for symptom relief to those who have survived the acute COVID-19 illness.
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- 2024
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17. Validation of a Quality Metric Score to Assess the Placement of Hydrogel Rectal Spacer in Patients Treated With Prostate Stereotactic Radiation Therapy
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Valentina Giacometti, PhD, Owen McLaughlin, MSc, Patrick Comiskey, MSc, Hannah Marshall, MSc, Orla A. Houlihan, MB, BCh, BAO, Glenn Whitten, MSc, Kevin M. Prise, PhD, Alan R. Hounsell, PhD, Suneil Jain, MB, BCh, BAO, PhD, and Conor K. McGarry, PhD
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Medical physics. Medical radiology. Nuclear medicine ,R895-920 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Purpose: To evaluate the quality of the interspace between the prostate and rectum and assess the effect on the dose to the rectum by measuring the spacer quality score (SQS) before and after implanting a hydrogel rectal spacer. Methods and Materials: Thirty patients with prostate cancer were treated with stereotactic ablative body radiation therapy as part of the SPORT clinical trial. Each patient had a 10 mL polyethylene glycol hydrogel spacer inserted transperineally. Computed tomography scans were acquired before and after spacer insertion, 10MV flattening filter free (FFF) stereotactic ablative body radiation therapy (SABR) treatment plans were generated using each image set. To calculate the SQS, the prostate-rectal interspace (PRI) was measured in the anterior-posterior orientation, parallel to the anatomic midline at the prostate base, apex, and midgland on the prespacer and postspacer computed tomography. Measurements were taken in 3 transverse positions between the prostate and the rectum, and PRI scores of 0, 1, and 2 were assigned if the interspace between prostate and rectum was
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- 2024
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18. Data Release 2 of S-PLUS: accurate template-fitting based photometry covering $\sim$1000 square degrees in 12 optical filters
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Almeida-Fernandes, F., Sampedro, L., Herpich, F. R., Molino, A., Barbosa, C. E., Buzzo, M. L., Overzier, R. A., de Lima, E. V. R., Nakazono, L. M. I., Schwarz, G. B. Oliveira, Perottoni, H. D., Bolutavicius, G. F., Gutiérrez-Soto, L. A., Santos-Silva, T., Vitorelli, A. Z., Werle, A., Whitten, D. D., Duarte, M. V. Costa, Bom, C. R., Coelho, P., Sodré Jr., L., Placco, V. M., Teixeira, G. S. M., Alonso-García, J., Beers, T. C., Kanaan, A., Ribeiro, T., Schoenell, W., and de Oliveira, C. Mendes
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Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Astrophysics of Galaxies ,Astrophysics - Solar and Stellar Astrophysics - Abstract
The Southern Photometric Local Universe Survey (S-PLUS) is an ongoing survey of $\sim$9300 deg$^2$ in the southern sky in a 12-band photometric system. This paper presents the second data release (DR2) of S-PLUS, consisting of 514 tiles covering an area of 950 deg$^2$. The data has been fully calibrated using a new photometric calibration technique suitable for the new generation of wide-field multi-filter surveys. This technique consists of a $\chi^2$ minimisation to fit synthetic stellar templates to already calibrated data from other surveys, eliminating the need for standard stars and reducing the survey duration by $\sim$15\%. We compare the template-predicted and S-PLUS instrumental magnitudes to derive the photometric zero-points (ZPs). We show that these ZPs can be further refined by fitting the stellar templates to the 12 S-PLUS magnitudes, which better constrain the models by adding the narrow-band information. We use the STRIPE82 region to estimate ZP errors, which are $\lesssim10$ mmags for filters J0410, J0430, $g$, J0515, $r$, J0660, $i$, J0861 and $z$; $\lesssim 15$ mmags for filter J0378; and $\lesssim 25$ mmags for filters $u$ and J0395. We describe the complete data flow of the S-PLUS/DR2 from observations to the final catalogues and present a brief characterisation of the data. We show that, for a minimum signal-to-noise threshold of 3, the photometric depths of the DR2 range from 19.9 mag to 21.3 mag (measured in Petrosian apertures), depending on the filter. The S-PLUS DR2 can be accessed from the website: https://splus.cloud}{https://splus.cloud., Comment: 29 pages, 26 figures, 7 tables
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- 2021
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19. The Photometric Metallicity and Carbon Distributions of the Milky Way's Halo and Solar Neighborhood from S-PLUS Observations of SDSS Stripe 82
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Whitten, Devin D., Placco, Vinicius M., Beers, Timothy C., An, Deokkeun, Lee, Young Sun, Almeida-Fernandes, Felipe, Herpich, Fabio R., Daflon, Simone, Barbosa, Carlos E., Perottoni, Helio D., Rossi, Silvia, Tissera, Patricia B., Yoon, Jinmi, Youakim, Kris, Schoenell, William, Ribeiro, Tiago, and Kanaan, Antonio
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Astrophysics - Astrophysics of Galaxies ,Astrophysics - Solar and Stellar Astrophysics - Abstract
We report photometric estimates of effective temperature, $T_{\rm eff}$, metallicity, [Fe/H], carbonicity, [C/Fe], and absolute carbon abundances, $A{\rm (C)}$, for over 700,000 stars from the Southern Photometric Local Universe Survey (S-PLUS) Data Release 2, covering a substantial fraction of the equatorial Sloan Digital Sky Survey Stripe 82. We present an analysis for two stellar populations: 1) halo main-sequence turnoff stars and 2) K-dwarf stars of mass $0.58 < M/M_{\odot} <0.75$ in the Solar Neighborhood. Application of the Stellar Photometric Index Network Explorer (SPHINX) to the mixed-bandwidth (narrow- plus wide-band) filter photometry from S-PLUS produces robust estimates of the metallicities and carbon abundances in stellar atmospheres over a wide range of temperature, $4250 < T_{\rm eff} \textrm{(K)} < 7000$. The use of multiple narrow-band S-PLUS filters enables SPHINX to achieve substantially lower levels of "catastrophic failures" (large offsets in metallicity estimates relative to spectroscopic determinations) than previous efforts using a single metallicity-sensitive narrow-band filter. We constrain the exponential slope of the Milky Way's K-dwarf halo metallicity distribution function (MDF), $\lambda_{10, \textrm{[Fe/H]}} = 0.85 \pm 0.21$, over the metallicity range $-2.5 < \textrm{[Fe/H]} < -1.0$; the MDF of our local-volume K-dwarf sample is well-represented by a gamma distribution with parameters $\alpha=2.8$ and $\beta=4.2$. S-PLUS photometry obtains absolute carbon abundances with a precision of $\sim 0.35$dex for stars with $T_{\rm eff} < 6500$K. We identify 364 candidate carbon-enhanced metal-poor stars, obtain assignments of these stars into the Yoon-Beers morphological groups in the $A$(C)-[Fe/H] space, and derive the CEMP frequencies., Comment: 27 pages, 14 figures, 3 tables, Accepted for publication in ApJ
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- 2021
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20. Avoiding common errors in X-ray photoelectron spectroscopy data collection and analysis, and properly reporting instrument parameters
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Joshua W. Pinder, George H. Major, Donald R. Baer, Jeff Terry, James E. Whitten, Jan Čechal, Jacob D. Crossman, Alvaro J. Lizarbe, Samira Jafari, Christopher D. Easton, Jonas Baltrusaitis, Matthijs A. van Spronsen, and Matthew R. Linford
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X-ray photoelectron spectroscopy ,XPS ,Reporting ,Data collection ,Common errors ,Materials of engineering and construction. Mechanics of materials ,TA401-492 ,Industrial electrochemistry ,TP250-261 - Abstract
Despite numerous tutorials and standards written to the technical community on X-ray photoelectron spectroscopy (XPS), difficulties with data acquisition, analysis, and reporting persist. This work focuses on common errors in XPS that are frequently observed in the scientific literature and their sources. Indeed, this work covers: (i) XPS data collection, initial data analysis, and data presentation, (ii) Handling XPS backgrounds, (iii) Common errors in XPS peak fitting, and (iv) XPS data presentation and reporting. Graphical examples of errors and appropriate ways of handling data and correcting errors are provided. Additional readings are listed for greater in-depth exploration of the subjects discussed.
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- 2024
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21. Estimates of functional muscle strength from a novel progressive lateral step-up test are feasible, reliable, and related to physical activity in children with cerebral palsy
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Trevor Batson, Sydni V. W. Whitten, Harshvardhan Singh, Chuan Zhang, Gavin Colquitt, and Christopher M. Modlesky
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Medicine ,Science - Published
- 2024
22. Estimates of electron correlation based on density expansions
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Whitten, Jerry L.
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Physics - Chemical Physics - Abstract
Methods for estimating the correlation energy of molecules and other electronic systems are discussed based on the assumption that the correlation energy can be partitioned between atomic regions. In one method, the electron density is expanded in terms of atomic contributions using rigorous electron repulsion bounds, and, in a second method, correlation contributions are associated with basis function pairs. The methods do not consider the detailed nature of localized excitations, but instead define a correlation energy per electron factor that that is unique to a specific atom. The correlation factors are basis function dependent and are determined by from configuration interaction calculations on diatomic and hydride molecules. The correlation energy estimates are compared with the results of high-level configuration interaction calculations for a test set of twenty-seven molecules representing a wide range of bonding environments (average error of 2.6%). An extension based on truncated CI calculations in which d- and hydrogen p-type functions are eliminated from the virtual space combined with estimates of dynamical correlation contributions using atomic correlation factors is discussed and applied to the dissociation of several molecules., Comment: 22 pages, 4 figures
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- 2020
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23. The $R$-Process Alliance: Fourth Data Release from the Search for $r$-Process-Enhanced Stars in the Galactic Halo
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Holmbeck, Erika M., Hansen, Terese T., Beers, Timothy C., Placco, Vinicius M., Whitten, Devin D., Rasmussen, Kaitlin C., Roederer, Ian U., Ezzeddine, Rana, Sakari, Charli M., Frebel, Anna, Drout, Maria R., Simon, Joshua D., Thompson, Ian B., Bland-Hawthorn, Joss, Gibson, Brad K., Grebel, Eva K., Kordopatis, Georges, Kunder, Andrea, Melendez, Jorge, Navarro, Julio F., Reid, Warren A., Seabroke, George, Steinmetz, Matthias, Watson, Fred, and Wyse, Rosemary F. G.
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
This compilation is the fourth data release from the $R$-Process Alliance (RPA) search for $r$-process-enhanced stars, and the second release based on "snapshot" high-resolution ($R \sim 30,000$) spectra collected with the du Pont 2.5m Telescope. In this data release, we propose a new delineation between the $r$-I and $r$-II stellar classes at $\mathrm{[Eu/Fe]} = +0.7$, instead of the empirically chosen $\mathrm{[Eu/Fe]} = +1.0$ level previously in use, based on statistical tests of the complete set of RPA data released to date. We also statistically justify the minimum level of [Eu/Fe] for definition of the $r$-I stars, [Eu/Fe] $> +0.3$. Redefining the separation between $r$-I and $r$-II stars will aid in analysis of the possible progenitors of these two classes of stars and whether these signatures arise from separate astrophysical sources at all. Applying this redefinition to previous RPA data, the number of identified $r$-II and $r$-I stars changes to 51 and 121, respectively, from the initial set of data releases published thus far. In this data release, we identify 21 new $r$-II, 111 new $r$-I (plus three re-identified), and 7 new (plus one re-identified) limited-$r$ stars out of a total of 232 target stars, resulting in a total sample of 72 new $r$-II stars, 232 new $r$-I stars, and 42 new limited-$r$ stars identified by the RPA to date., Comment: 17 pages, 7 figures, 6 tables; accepted to ApJS
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- 2020
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24. The R-Process Alliance: The Peculiar Chemical Abundance Pattern of RAVE J183013.5-455510
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Placco, Vinicius M., Santucci, Rafael M., Yuan, Zhen, Mardini, Mohammad K., Holmbeck, Erika M., Wang, Xilu, Surman, Rebecca, Hansen, Terese T., Roederer, Ian U., Beers, Timothy C., Choplin, Arthur, Ji, Alexander P., Ezzeddine, Rana, Frebel, Anna, Sakari, Charli M., Whitten, Devin D., and Zepeda, Joseph
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
We report on the spectroscopic analysis of RAVE J183013.5-455510, an extremely metal-poor star, highly enhanced in CNO, and with discernible contributions from the rapid neutron-capture process. There is no evidence of binarity for this object. At [Fe/H]=-3.57, this is one of the lowest metallicity stars currently observed, with 18 measured abundances of neutron-capture elements. The presence of Ba, La, and Ce abundances above the Solar System r-process predictions suggest that there must have been a non-standard source of r-process elements operating at such low metallicities. One plausible explanation is that this enhancement originates from material ejected at unusually fast velocities in a neutron star merger event. We also explore the possibility that the neutron-capture elements were produced during the evolution and explosion of a rotating massive star. In addition, based on comparisons with yields from zero-metallicity faint supernova, we speculate that RAVE J1830-4555 was formed from a gas cloud pre-enriched by both progenitor types. From analysis based on Gaia DR2 measurements, we show that this star has orbital properties similar to the Galactic metal-weak thick-disk stellar population., Comment: Accepted for publication in ApJ
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- 2020
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25. Prolonged Tracheal Intubation and the Association Between Patent Ductus Arteriosus and Bronchopulmonary Dysplasia: A Secondary Analysis of the PDA-TOLERATE trial
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Clyman, Ronald I, Kaempf, Joseph, Liebowitz, Melissa, Erdeve, Omer, Bulbul, Ali, Håkansson, Stellan, Lindqvist, Johanna, Farooqi, Aijaz, Katheria, Anup, Sauberan, Jason, Singh, Jaideep, Nelson, Kelly, Wickremasinghe, Andrea, Dong, Lawrence, Hassinger, Denise C, Aucott, Susan W, Hayashi, Madoka, Heuchan, Anne Marie, Carey, William A, Derrick, Matthew, Fernandez, Erika, Sankar, Meera, Leone, Tina, Perez, Jorge, Serize, Arturo, Investigators, the PDA-TOLERATE Trial, Fields, Scott, Whitten, Lora, Rogers, Stefanie, Okulu, Emel, Tunc, Gaffari, Ucar, Tayfun, Ünal, Ebru Türkoglu, Steen, Jane, Arnell, Kathy, Holtschlag, Sarah, Schreiber, Michael, Peters, Caryn, Gilmore, Maureen, McKay, Lorna, Carole, Dianne, Shaw, Annette, Harris, Malinda, Amsbaugh, Amy, Liedl, Lavonne M, Wolf, Sue, Groner, Avi, Kimball, Amy, Kim, Jae, Bridge, Renee, Knodel, Ellen, Weng, Chrissy, Barbosa, Magaly Diaz, Polin, Richard, Weindler, Marilyn, Noori, Shahab, Reese, Jeffrey, and Sun, Yao
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Paediatrics ,Biomedical and Clinical Sciences ,Pediatric ,Preterm ,Low Birth Weight and Health of the Newborn ,Perinatal Period - Conditions Originating in Perinatal Period ,Rare Diseases ,Neonatal Respiratory Distress ,Cardiovascular ,Orphan Drug ,Lung ,Good Health and Well Being ,Bronchopulmonary Dysplasia ,Ductus Arteriosus ,Patent ,Female ,Humans ,Infant ,Newborn ,Intubation ,Intratracheal ,Male ,Prospective Studies ,Respiration ,Artificial ,Severity of Illness Index ,Time Factors ,PDA-TOLERATE Trial Investigators ,bronchopulmonary dysplasia ,patent ductus arteriosus ,premature birth ,Human Movement and Sports Sciences ,Paediatrics and Reproductive Medicine ,Pediatrics - Abstract
In the PDA-TOLERATE trial, persistent (even for several weeks) moderate to large patent ductus arteriosus (PDA) was not associated with an increased risk of BPD when the infant required
- Published
- 2021
26. Identification of a Group III CEMP-no Star in the Dwarf Spheroidal Galaxy Canes Venatici I
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Yoon, Jinmi, Whitten, Devin D., Beers, Timothy C., Lee, Young Sun, Masseron, Thomas, and Placco, Vinicius M.
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Astrophysics - Solar and Stellar Astrophysics - Abstract
CEMP-no stars, a subclass of carbon-enhanced metal-poor (CEMP) stars, are one of the most significant stellar populations in Galactic Archaeology, because they dominate the low end of the metallicity distribution function, providing information on the early star-formation and chemical-evolution history of the Milky Way and its satellite galaxies. Here we present an analysis of medium-resolution ($R \sim 1,800$) optical spectroscopy for a CEMP giant, SDSS J132755.56+333521.7, observed with the Large Binocular Telescope (LBT), one of the brightest ($g \sim 20.5$) members of the classical dwarf spheroidal galaxy, Canes Venatici I (CVn I). Many CEMP stars discovered to date have very cool effective temperatures ($T_{\mathrm{eff}}< 4500$ K), resulting in strong veiling by molecular carbon bands over their optical spectra at low/medium spectral resolution. We introduce a technique to mitigate the carbon-veiling problem to obtain reliable stellar parameters and validate this method with the LBT medium-resolution optical spectra of the ultra metal-poor ([Fe/H] = $-4.0$) CEMP-no dwarf, G 77-61, and seven additional very cool CEMP stars, which have published high-resolution spectroscopic parameters. We apply this technique to the LBT spectrum of SDSS J132755.56+333521.7. We find that this star is well-described with parameters $T_{\mathrm{eff}}=4530$ K, log $g=$ 0.7, [Fe/H] $ = -3.38$, and absolute carbon abundance $A$(C) = 7.23, indicating that it is likely the first Group III CEMP-no star identified in CVn I. The Group III identification of this star suggests that it is a member of the extremely metal-poor population in CVn I, which may have been accreted into its halo., Comment: 18 pages, 3 tables, 9 figures, accepted to the Astrophysical Journal (with minor revisions made after the referee's report)
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- 2019
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27. Dynamical Relics of the Ancient Galactic Halo
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Yuan, Zhen, Myeong, G. C., Beers, Timothy C., Evans, N. Wyn, Lee, Young Sun, Banerjee, Projjwal, Gudin, Dmitrii, Hattori, Kohei, Li, Haining, Matsuno, Tadafumi, Placco, Vinicius M., Smith, M. C., Whitten, Devin D., and Zhao, Gang
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Astrophysics - Astrophysics of Galaxies - Abstract
We search for dynamical substructures in the LAMOST DR3 very metal-poor (VMP) star catalog. After cross-matching with Gaia DR2, there are 3300 VMP stars with available high-quality astrometric information that have halo-like kinematics. We apply a method based on self-organizing maps to find groups clustered in the 4D space of orbital energy and angular momentum. We identify 57 dynamically tagged groups, which we label DTG-1 to DTG-57. Most of them belong to existing substructures in the nearby halo, such as the $Gaia$ Sausage or Sequoia. The stream identified by Helmi et al. is recovered, but the two disjoint portions of the substructure have distinct dynamical properties. The very retrograde substructure Rg5 found previously by Myeong et al. is also retrieved. We report 6 new DTGs with highly retrograde orbits, 2 with very prograde orbits, and 12 with polar orbits. By mapping other datasets (APOGEE halo stars, and catalogs of r-process-enhanced and CEMP stars) onto the trained neuron map, we can associate stars with detailed chemical abundances to the DTGs, and look for associations with chemically peculiar stars. The highly eccentric $Gaia$ Sausage groups contain representatives both of debris from the satellite itself (which is $\alpha$-poor) and the Splashed Disk, sent up into eccentric halo orbits from the encounter (and is $\alpha$-rich). The new prograde substructures also appear to be associated with the Splashed Disk. The DTGs belonging to the $Gaia$ Sausage host two relatively metal-rich $r$-II stars and six CEMP stars in different sub-classes, consistent with the idea that the $Gaia$ Sausage progenitor is a massive dwarf galaxy. Rg5 is dynamically associated with two highly $r$-process-enhanced stars with [Fe/H] $\sim -$3. This finding indicates that its progenitor might be an ultra-faint dwarf galaxy that has experienced $r$-process enrichment from neutron star mergers., Comment: ApJ, submitted
- Published
- 2019
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28. Constraints on the Galactic Inner Halo Assembly History from the Age Gradient of Blue Horizontal-branch Stars
- Author
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Whitten, Devin D., Beers, Timothy C., Placco, Vinicius M., Santucci, Rafael M., Denissenkov, Pavel, Tissera, Patricia B., Mejías, Andrea, Hernitschek, Nina, and Carollo, Daniela
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Astrophysics - Astrophysics of Galaxies ,Astrophysics - Solar and Stellar Astrophysics - Abstract
We present an analysis of the relative age distribution of the Milky Way halo, based on samples of blue horizontal-branch (BHB) stars obtained from the Panoramic Survey Telescope and Rapid Response System and \textit{Galaxy Evolution Explorer} photometry, as well a Sloan Digital Sky Survey spectroscopic sample. A machine-learning approach to the selection of BHB stars is developed, using support vector classification, with which we produce chronographic age maps of the Milky Way halo out to 40\,kpc from the Galactic center. We identify a characteristic break in the relative age profiles of our BHB samples, corresponding to a Galactocentric radius of $R_{\rm{GC}} \sim 14$\,kpc. Within the break radius, we find an age gradient of $-63.4 \pm 8.2$ Myr kpc$^{-1}$, which is significantly steeper than obtained by previous studies that did not discern between the inner- and outer-halo regions. The gradient in the relative age profile and the break radius signatures persist after correcting for the influence of metallicity on our spectroscopic calibration sample. We conclude that neither are due to the previously recognized metallicity gradient in the halo, as one passes from the inner-halo to the outer-halo region. Our results are consistent with a dissipational formation of the inner-halo population, involving a few relatively massive progenitor satellites, such as those proposed to account for the assembly of \textit{Gaia}-Enceladus, which then merged with the inner halo of the Milky Way., Comment: 13 figures
- Published
- 2019
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29. Prediction of many-electron wavefunctions using atomic potentials: extended basis sets and molecular dissociation
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Whitten, Jerry L.
- Subjects
Physics - Chemical Physics - Abstract
A one-electron Schroedinger equation based on special one-electron potentials for atoms is shown to exist that produces orbitals for an arbitrary molecule that are sufficiently accurate to be used without modification to construct single- and multi-determinant wavefunctions. The exact Hamiltonian is used to calculate the energy variationally and to generate configuration interaction expansions. Earlier work on equilibrium geometries is extended to larger basis sets and molecular dissociation. For a test set of molecules representing different bonding environments, a single set of invariant atomic potentials gives wavefunctions with energies that deviate from configuration interaction energies based on SCF orbitals by less than 0.04 eV per bond or valence electron pair. On a single diagonalization of the Fock matrix, the corresponding errors are reduced 0.01 eV. Atomization energies are also in good agreement with CI values based on canonical SCF orbitals. Configuration interaction applications to single bond dissociations of water and glycine, and multiple bond dissociations of ethylene and oxygen produce dissociation energy curves in close agreement with CI calculations based on canonical SCF orbitals for the entire range of internuclear distances.
- Published
- 2019
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30. J-PLUS: photometric calibration of large area multi-filter surveys with stellar and white dwarf loci
- Author
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López-Sanjuan, C., Varela, J., Cristóbal-Hornillos, D., Ramió, H. Vázquez, Carrasco, J. M., Tremblay, P. -E., Whitten, D. D., Placco, V. M., Marín-Franch, A., Cenarro, A. J., Ederoclite, A., Alfaro, E., Coelho, P. R. T., Jiménez-Esteban, F. M., Jiménez-Teja, Y., Apellániz, J. Maíz, Sobral, D., Vílchez, J. M., Alcaniz, J., Angulo, R. E., Dupke, R. A., Hernández-Monteagudo, C., de Oliveira, C. L. Mendes, Moles, M., and Sodré Jr, L.
- Subjects
Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
We present the photometric calibration of the twelve optical passbands observed by the Javalambre Photometric Local Universe Survey (J-PLUS). The proposed calibration method has four steps: (i) definition of a high-quality set of calibration stars using Gaia information and available 3D dust maps; (ii) anchoring of the J-PLUS gri passbands to the Pan-STARRS photometric solution, accounting for the variation of the calibration with the position of the sources on the CCD; (iii) homogenization of the photometry in the other nine J-PLUS filters using the dust de-reddened instrumental stellar locus in (X - r) versus (g - i) colours, where X is the filter to calibrate. The zero point variation along the CCD in these filters was estimated with the distance to the stellar locus. Finally, (iv) the absolute colour calibration was obtained with the white dwarf locus. We performed a joint Bayesian modelling of eleven J-PLUS colour-colour diagrams using the theoretical white dwarf locus as reference. This provides the needed offsets to transform instrumental magnitudes to calibrated magnitudes outside the atmosphere. The uncertainty of the J-PLUS photometric calibration, estimated from duplicated objects observed in adjacent pointings and accounting for the absolute colour and flux calibration errors, are ~19 mmag in u, J0378 and J0395, ~11 mmag in J0410 and J0430, and ~8 mmag in g, J0515, r, J0660, i, J0861, and z. We present an optimized calibration method for the large area multi-filter J-PLUS project, reaching 1-2% accuracy within an area of 1 022 square degrees without the need for long observing calibration campaigns or constant atmospheric monitoring. The proposed method will be adapted for the photometric calibration of J-PAS, that will observe several thousand square degrees with 56 narrow optical filters., Comment: Submitted to Astronomy and Astrophysics. 14 figures, 5 tables. Comments are welcome. Extra information about the photometry update can be found at www.j-plus.es/datareleases/dr1_swdl_calibration
- Published
- 2019
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31. The Southern Photometric Local Universe Survey (S-PLUS): improved SEDs, morphologies and redshifts with 12 optical filters
- Author
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de Oliveira, C. Mendes, Ribeiro, T., Schoenell, W., Kanaan, A., Overzier, R. A., Molino, A., Sampedro, L., Coelho, P., Barbosa, C. E., Cortesi, A., Costa-Duarte, M. V., Herpich, F. R., Hernandez-Jimenez, J. A., Placco, V. M., Xavier, H. S., Abramo, L. R., Saito, R. K., Chies-Santos, A. L., Ederoclite, A., de Oliveira, R. Lopes, Gonçalves, D. R., Akras, S., Almeida, L. A., Almeida-Fernandes, F., Beers, T. C., Bonatto, C., Bonoli, S., Cypriano, E. S., de Lima, Erik V. R., de Souza, R. S., de Souza, G. Fabiano, Ferrari, F., Gonçalves, T. S., Gonzalez, A. H., Gutiérrez-Soto, L. A., Hartmann, E. A., Jaffe, Y., Kerber, L. O., Lima-Dias, C., Lopes, P. A. A., Menendez-Delmestre, K., Nakazono, L. M. I., Novais, P. M., Ortega-Minakata, R. A., Pereira, E. S., Perottoni, H. D., Queiroz, C., Reis, R. R. R., Santos, W. A., Santos-Silva, T., Santucci, R. M., Barbosa, C. L., Siffert, B. B., Sodré Jr., L., Torres-Flores, S., Westera, P., Whitten, D. D., Alcaniz, J. S., Alonso-García, Javier, Alencar, S., Alvarez-Candal, A., Amram, P., Azanha, L., Barbá, R. H., Bernardinelli, P. H., Fernandes, M. Borges, Branco, V., Brito-Silva, D., Buzzo, M. L., Caffer, J., Campillay, A., Cano, Z., Carvano, J. M., Castejon, M., Fernandes, R. Cid, Dantas, M. L. L., Daflon, S., Damke, G., de la Reza, R., de Azevedo, L. J. de Melo, De Paula, D. F., Diem, K. G., Donnerstein, R., Dors, O. L., Dupke, R., Eikenberry, S., Escudero, Carlos G., Faifer, Favio R., Farías, H., Fernandes, B., Fernandes, C., Fontes, S., Galarza, A., Hirata, N. S. T., Katena, L., Gregorio-Hetem, J., Hernández-Fernández, J. D., Izzo, L., Arancibia, M. Jaque, Jatenco-Pereira, V., Jiménez-Teja, Y., Kann, D. A., Krabbe, A. C., Labayru, C., Lazzaro, D., Neto, G. B. Lima, Lopes, Amanda R., Magalhães, R., Makler, M., de Menezes, R., Miralda-Escudé, J., Monteiro-Oliveira, R., Montero-Dorta, A. D., Muñoz-Elgueta, N., Nemmen, R. S., Castellón, J. L. Nilo, Oliveira, A. S., Ortíz, D., Pattaro, E., Pereira, C. B., Quint, B., Riguccini, L., Pinto, H. J. Rocha, Rodrigues, I., Roig, F., Rossi, S., Saha, Kanak, Santos, R., Müller, A. Schnorr, Sesto, Leandro A., Silva, R., Castelli, Analía V. Smith, Teixeira, Ramachrisna, Telles, E., de Souza, R. C. Thom, Thöne, C., Trevisan, M., Postigo, A. de Ugarte, Urrutia-Viscarra, F., Veiga, C. H., Vika, M., Vitorelli, A. Z., Werle, A., Werner, S. V., and Zaritsky, D.
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Astrophysics - Astrophysics of Galaxies ,Astrophysics - Cosmology and Nongalactic Astrophysics ,Astrophysics - High Energy Astrophysical Phenomena ,Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Solar and Stellar Astrophysics - Abstract
The Southern Photometric Local Universe Survey (S-PLUS) is imaging ~9300 deg^2 of the celestial sphere in twelve optical bands using a dedicated 0.8 m robotic telescope, the T80-South, at the Cerro Tololo Inter-American Observatory, Chile. The telescope is equipped with a 9.2k by 9.2k e2v detector with 10 um pixels, resulting in a field-of-view of 2 deg^2 with a plate scale of 0.55"/pixel. The survey consists of four main subfields, which include two non-contiguous fields at high Galactic latitudes (8000 deg^2 at |b| > 30 deg) and two areas of the Galactic plane and bulge (for an additional 1300 deg^2). S-PLUS uses the Javalambre 12-band magnitude system, which includes the 5 u, g, r, i, z broad-band filters and 7 narrow-band filters centered on prominent stellar spectral features: the Balmer jump/[OII], Ca H+K, H-delta, G-band, Mg b triplet, H-alpha, and the Ca triplet. S-PLUS delivers accurate photometric redshifts (delta_z/(1+z) = 0.02 or better) for galaxies with r < 20 AB mag and redshift < 0.5, thus producing a 3D map of the local Universe over a volume of more than 1 (Gpc/h)^3. The final S-PLUS catalogue will also enable the study of star formation and stellar populations in and around the Milky Way and nearby galaxies, as well as searches for quasars, variable sources, and low-metallicity stars. In this paper we introduce the main characteristics of the survey, illustrated with science verification data highlighting the unique capabilities of S-PLUS. We also present the first public data release of ~336 deg^2 of the Stripe-82 area, which is available at http://datalab.noao.edu/splus., Comment: Updated to reflect the published version (MNRAS, 489, 241). For a short introductory video of the S-PLUS project, see https://youtu.be/yc5kHrHU9Jk - The S-PLUS Data Release 1 is available at http://datalab.noao.edu/splus
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- 2019
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32. Origin of the CEMP-no Group Morphology in the Milky Way
- Author
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Yoon, Jinmi, Beers, Timothy C., Tian, Di, and Whitten, Devin D.
- Subjects
Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
The elemental-abundance signatures of the very first stars are imprinted on the atmospheres of CEMP-no stars, as various evidence suggests they are bona-fide second-generation stars. It has recently been recognized that the CEMP-no stars can be sub-divided into at least two groups, based on their distinct morphology in the $A$(C)-[Fe/H] space, indicating the likely existence of multiple pathways for their formation. In this work, we compare the halo CEMP-no group morphology with that of stars found in satellite dwarf galaxies of the Milky Way -- a very similar $A$(C)-[Fe/H] pattern is found, providing clear evidence that halo CEMP-no stars were indeed accreted from their host mini-halos, similar in nature to those that formed in presently observed ultra-faint dwarfs (UFDs) and dwarf spheroidal (dSph) galaxies. We also infer that the previously noted "anomalous" CEMP-no halo stars (with high $A$(C) and low [Ba/Fe] ratios) that otherwise would be associated with Group I may have the same origin as the Group III CEMP-no halo stars, by analogy with the location of several Group III CEMP-no stars in the UFDs and dSphs and their distinct separation from that of the CEMP-$s$ stars in the $A$(Ba)-$A$(C) space. Interestingly, CEMP-no stars associated with UFDs include both Group II and Group III stars, while the more massive dSphs appear to have only Group II stars. We conclude that understanding the origin of the CEMP-no halo stars requires knowledge of the masses of their parent mini-halos, which is related to the amount of carbon dilution prior to star formation, in addition to the nature of their nucleosynthetic origin., Comment: 13 pages, 3 figures, and 1 table, accepted for publication in the Astrophysical Journal with minor changes
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- 2019
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33. Further understanding the connection between Alzheimer's disease and Down syndrome
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Snyder, Heather M, Bain, Lisa J, Brickman, Adam M, Carrillo, Maria C, Esbensen, Anna J, Espinosa, Joaquin M, Fernandez, Fabian, Fortea, Juan, Hartley, Sigan L, Head, Elizabeth, Hendrix, James, Kishnani, Priya S, Lai, Florence, Lao, Patrick, Lemere, Cynthia, Mobley, William, Mufson, Elliott J, Potter, Huntington, Zaman, Shahid H, Granholm, Ann‐Charlotte, Rosas, H Diana, Strydom, Andre, Whitten, Michelle Sie, and Rafii, Michael S
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Neurodegenerative ,Brain Disorders ,Intellectual and Developmental Disabilities (IDD) ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Alzheimer's Disease ,Acquired Cognitive Impairment ,Dementia ,Neurosciences ,Aging ,Down Syndrome ,Aetiology ,2.1 Biological and endogenous factors ,Neurological ,Good Health and Well Being ,Alzheimer Disease ,Amyloid beta-Peptides ,Humans ,Alzheimer's disease ,Down syndrome ,trisomy ,vascular contributions ,Clinical Sciences ,Geriatrics - Abstract
Improved medical care of individuals with Down syndrome (DS) has led to an increase in life expectancy to over the age of 60 years. In conjunction, there has been an increase in age-related co-occurring conditions including Alzheimer's disease (AD). Understanding the factors that underlie symptom and age of clinical presentation of dementia in people with DS may provide insights into the mechanisms of sporadic and DS-associated AD (DS-AD). In March 2019, the Alzheimer's Association, Global Down Syndrome Foundation and the LuMind IDSC Foundation partnered to convene a workshop to explore the state of the research on the intersection of AD and DS research; to identify research gaps and unmet needs; and to consider how best to advance the field. This article provides a summary of discussions, including noting areas of emerging science and discovery, considerations for future studies, and identifying open gaps in our understanding for future focus.
- Published
- 2020
34. Structural basis underlying the synergism of NADase and SLO during group A Streptococcus infection
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Wei-Jiun Tsai, Yi-Hsin Lai, Yong-An Shi, Michal Hammel, Anthony P. Duff, Andrew E. Whitten, Karyn L. Wilde, Chun-Ming Wu, Robert Knott, U-Ser Jeng, Chia-Yu Kang, Chih-Yu Hsu, Jian-Li Wu, Pei-Jane Tsai, Chuan Chiang-Ni, Jiunn-Jong Wu, Yee-Shin Lin, Ching-Chuan Liu, Toshiya Senda, and Shuying Wang
- Subjects
Biology (General) ,QH301-705.5 - Abstract
Structural and mutational analyses reveal interactions between NAD+-glycohydrolase and Streptolysin O critical for Group A Streptococcus virulence, validated in a murine infection model.
- Published
- 2023
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35. Long duration anaesthesia in pigs with an infusion of alfaxalone and dexmedetomidine
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Irving Kat, Benjamin J. Ahern, Jayesh Dhanani, Grant Whitten, Nicholas Cowling, and Wendy Goodwin
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TIVA ,pig ,alfaxalone ,dexmedetomidine ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Pigs are commonly maintained on total intravenous anaesthesia when used in comparative medical research to study controlled manual ventilation of the lung. In this case study, four pigs were anaesthetised with a total intravenous anaesthetic infusion of alfaxalone and dexmedetomidine for up to 24 h whilst being mechanically ventilated. Cardiovascular parameters, blood gas values and body temperature were minimally affected throughout the anaesthetic period. Additional analgesia is recommended when utilising this drug combination for procedures that involve noxious stimuli.
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- 2022
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36. Public Interest Group on Cancer Research: a successful patient–researcher partnership in Newfoundland and Labrador
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Sevtap Savas, Holly Etchegary, Teri Stuckless, Cindy Whitten, Jason Wiseman, Derrick Bishop, John King, Janine Cutting, and Darrell Peddle
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Cancer ,Caregivers ,Diversity ,EDI ,Family members ,Newfoundland and Labrador ,Medicine ,Medicine (General) ,R5-920 - Abstract
Plain English summary Cancer patients and their family members have unique and lived experience with the condition. Therefore, collaborating with them is important in cancer science. We aimed to create such a collaboration in Newfoundland and Labrador, Canada. In 2021, we successfully formed our diverse collaborative group. Currently, our group includes 12 public representatives. We meet online and discuss matters important to members. We also design studies and events together. Our discussions have identified four topics that need further research and policy changes such as information needs and unique needs of caregivers and family members. Our activities expand over time. For example, lately we started to advocate for other cancer patients and families. In conclusion, we formed a successful cancer patient, family member, and researcher collaborative group. Our work informs the public, healthcare systems, and scientists on important cancer related matters.
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- 2022
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37. The R-Process Alliance: Spectroscopic Follow-up of Low-Metallicity Star Candidates from the Best & Brightest Survey
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Placco, Vinicius M., Santucci, Rafael M., Beers, Timothy C., Chaname, Julio, Sepulveda, Maria Paz, Coronado, Johanna, Rossi, Silvia, Lee, Young Sun, Starkenburg, Else, Youakim, Kris, Barrientos, Manuel, Ezzeddine, Rana, Frebel, Anna, Hansen, Terese T., Holmbeck, Erika M., Ji, Alexander P., Rasmussen, Kaitlin C., Roederer, Ian U., Sakari, Charli M., and Whitten, Devin D.
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Astrophysics - Solar and Stellar Astrophysics - Abstract
We present results from an observing campaign to identify low-metallicity stars in the Best & Brightest Survey. From medium-resolution (R ~ 1, 200 - 2, 000) spectroscopy of 857 candidates, we estimate the stellar atmospheric parameters (Teff, log g, and [Fe/H]), as well as carbon and alpha-element abundances. We find that 69% of the observed stars have [Fe/H] <= -1.0, 39% have [Fe/H] <= -2.0, and 2% have [Fe/H] <= -3.0. There are also 133 carbon-enhanced metal-poor (CEMP) stars in this sample, with 97 CEMP Group I and 36 CEMP Group II stars identified in the A(C) versus [Fe/H] diagram. A subset of the confirmed low-metallicity stars were followed-up with high-resolution spectroscopy, as part of the R-process Alliance, with the goal of identifying new highly and moderately r-process-enhanced stars. Comparison between the stellar atmospheric parameters estimated in this work and from high-resolution spectroscopy exhibit good agreement, confirming our expectation that medium-resolution observing campaigns are an effective way of selecting interesting stars for further, more targeted, efforts., Comment: 57 pages, accepted for publication in ApJ
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- 2018
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38. J-PLUS: Identification of low-metallicity stars with artificial neural networks using SPHINX
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Whitten, D. D., Placco, V. M., Beers, T. C., Chies-Santos, A. L., Bonatto, C., Varela, J., Cristóbal-Hornillos, D., Ederoclite, A., Masseron, T., Lee, Y. S., Akras, S., Fernandes, M. Borges, Caballero, J. A., Cenarro, A. J., Coelho, P., Costa-Duarte, M. V., Daflon, S., Dupke, R. A., de Oliveira, R. Lopes, López-Sanjuan, C., Marín-Franch, A., de Oliveira, C. Mendes, Moles, M., Orsi, A. A., Rossi, S., Sodré, L., and Ramió, H. Vázquez
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
We present a new methodology for the estimation of stellar atmospheric parameters from narrow- and intermediate-band photometry of the Javalambre Photometric Local Universe Survey (J-PLUS), and propose a method for target pre-selection of low-metallicity stars for follow-up spectroscopic studies. Photometric metallicity estimates for stars in the globular cluster M15 are determined using this method. By development of a neural-network-based photometry pipeline, we aim to produce estimates of effective temperature, $T_{\rm eff}$, and metallicity, [Fe/H], for a large subset of stars in the J-PLUS footprint. The Stellar Photometric Index Network Explorer, SPHINX, is developed to produce estimates of $T_{\rm eff}$ and [Fe/H], after training on a combination of J-PLUS photometric inputs and synthetic magnitudes computed for medium-resolution (R ~ 2000) spectra of the Sloan Digital Sky Survey. This methodology is applied to J-PLUS photometry of the globular cluster M15. Effective temperature estimates made with J-PLUS Early Data Release photometry exhibit low scatter, \sigma($T_{\rm eff}$) = 91 K, over the temperature range 4500 < $T_{\rm eff}$ (K) < 8500. For stars from the J-PLUS First Data Release with 4500 < $T_{\rm eff}$ (K) < 6200, 85 $\pm$ 3% of stars known to have [Fe/H] <-2.0 are recovered by SPHINX. A mean metallicity of [Fe/H]=-2.32 $\pm$ 0.01, with a residual spread of 0.3 dex, is determined for M15 using J-PLUS photometry of 664 likely cluster members. We confirm the performance of SPHINX within the ranges specified, and verify its utility as a stand-alone tool for photometric estimation of effective temperature and metallicity, and for pre-selection of metal-poor spectroscopic targets., Comment: 18 pages, 12 figures
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- 2018
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39. Prediction of many-electron wavefunctions using atomic potentials: refinements and extensions to transition metals and large systems
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Whitten, Jerry L.
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Physics - Chemical Physics ,Quantum Physics - Abstract
For a given many-electron molecule, it is possible to define a corresponding one-electron Schr\"odinger equation, using potentials derived from simple atomic densities, whose solution predicts fairly accurate molecular orbitals for single- and multi-determinant wavefunctions for the molecule. The energy is not predicted and must be evaluated by calculating Coulomb and exchange interactions over the predicted orbitals. Transferable potentials for first-row atoms and transition metal oxides that can be used without modification in different molecules are reported. For improved accuracy, molecular wavefunctions can be refined by slightly scaling nuclear charges and by introducing potentials optimized for functional groups. For a test set of 20 molecules representing different bonding environments, the transferable potentials with scaling give wavefunctions with energies that deviate from exact self-consistent field or configuration interaction energies by less than 0.05 eV and 0.02 eV per bond or valence electron pair, respectively. Applications to the ground and excited states of a Ti18O36 nanoparticle and chlorophyll-s are reported., Comment: 20 pages. arXiv admin note: text overlap with arXiv:1702.06852
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- 2018
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40. Method for including static correlation in molecules
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Whitten, Jerry L.
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Physics - Chemical Physics - Abstract
New ways to treat electron correlation in electronic structure problems are discussed in the context of many-electron theory. The present work focuses primarily on static correlation. In related work, a method for including dynamical correlation effects is described. The overlap density of two basis functions i, j and the associated density matrix is a signature of bond formation and can be used to define a local molecular orbital, i + j. The total electron density \r{ho} can be written in terms of densities derived from these two-center orbitals and residual one-center terms. In the interaction of total densities, the self-energy terms resulting from an average field (Hartree-Fock) Hamiltonian are allowed to respond to an explicit inclusion of electron repulsion by mixing (i + j)1(i + j)2 +{\lambda}(i - j)1(i - j)2 . The energy lowering weighted by the density matrix ij approximates this contribution to the correlation energy of the system. Numerical calculations for a set of 20 molecules representing different bonding environments are reported and results are compared with configuration interaction calculations using the same molecular orbital basis. Calculations on chlorin, N4C20H16, are reported as an example of how the method could be used in an embedding treatment of a large system., Comment: 12 pages including two tables and two figures
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- 2018
41. Spectroscopic Validation of Low-Metallicity Stars from RAVE
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Placco, Vinicius M., Beers, Timothy C., Santucci, Rafael M., Chaname, Julio, Sepulveda, Maria Paz, Coronado, Johanna, Points, Sean D., Kaleida, Catherine C., Rossi, Silvia, Kordopatis, Georges, Lee, Young Sun, Matijevic, Gal, Frebel, Anna, Hansen, Terese T., Holmbeck, Erika M., Rasmussen, Kaitlin C., Roederer, Ian U., Sakari, Charli M., and Whitten, Devin D.
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
We present results from a medium-resolution (R ~ 2, 000) spectroscopic follow-up campaign of 1,694 bright (V < 13.5), very metal-poor star candidates from the RAdial Velocity Experiment (RAVE). Initial selection of the low-metallicity targets was based on the stellar parameters published in RAVE Data Releases 4 and 5. Follow-up was accomplished with the Gemini-N and Gemini-S, the ESO/NTT, the KPNO/Mayall, and the SOAR telescopes. The wavelength coverage for most of the observed spectra allows for the determination of carbon and {\alpha}-element abundances, which are crucial for con- sidering the nature and frequency of the carbon-enhanced metal-poor (CEMP) stars in this sample. We find that 88% of the observed stars have [Fe/H] <= -1.0, 61% have [Fe/H] <= -2.0, and 3% have [Fe/H] <= -3.0 (with four stars at [Fe/H] <= -3.5). There are 306 CEMP star candidates in this sample, and we identify 169 CEMP Group I, 131 CEMP Group II, and 6 CEMP Group III stars from the A(C) vs. [Fe/H] diagram. Inspection of the [alpha/C] abundance ratios reveals that five of the CEMP Group II stars can be classified as "mono-enriched second-generation" stars. Gaia DR1 matches were found for 734 stars, and we show that transverse velocities can be used as a confirmatory selection criteria for low-metallicity candidates. Selected stars from our validated list are being followed-up with high-resolution spectroscopy, to reveal their full chemical abundance patterns for further studies., Comment: 134 pages, accepted for publication in AJ
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- 2018
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42. J-PLUS: Morphological star/galaxy classification by PDF analysis
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López-Sanjuan, C., Ramió, H. Vázquez, Varela, J., Spinoso, D., Angulo, R. E., Muniesa, D., Viironen, K., Cristóbal-Hornillos, D., Cenarro, A. J., Ederoclite, A., Marín-Franch, A., Moles, M., Ascaso, B., Bonoli, S., Chies-Santos, A. L., Coelho, P. R. T., Costa-Duarte, M. V., Cortesi, A., Díaz-García, L. A., Dupke, R. A., Galbany, L., Hernández-Monteagudo, C., Logroño-García, R., Molino, A., Orsi, A., Placco, V. M., Sampedro, L., Roman, I. San, Vilella-Rojo, G., Whitten, D. D., de Oliveira, C. L. Mendes, and Sodré Jr, L.
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Astrophysics - Astrophysics of Galaxies - Abstract
Our goal is to morphologically classify the sources identified in the images of the J-PLUS early data release (EDR) into compact (stars) or extended (galaxies) using a suited Bayesian classifier. J-PLUS sources exhibit two distinct populations in the r-band magnitude vs. concentration plane, corresponding to compact and extended sources. We modelled the two-population distribution with a skewed Gaussian for compact objects and a log-normal function for the extended ones. The derived model and the number density prior based on J-PLUS EDR data were used to estimate the Bayesian probability of a source to be star or galaxy. This procedure was applied pointing-by-pointing to account for varying observing conditions and sky position. Finally, we combined the morphological information from g, r, and i broad bands in order to improve the classification of low signal-to-noise sources. The derived probabilities are used to compute the pointing-by-pointing number counts of stars and galaxies. The former increases as we approach to the Milky Way disk, and the latter are similar across the probed area. The comparison with SDSS in the common regions is satisfactory up to r ~ 21, with consistent numbers of stars and galaxies, and consistent distributions in concentration and (g - i) colour spaces. We implement a morphological star/galaxy classifier based on PDF analysis, providing meaningful probabilities for J-PLUS sources to one magnitude deeper (r ~ 21) than a classical boolean classification. These probabilities are suited for the statistical study of 150k stars and 101k galaxies with 15 < r < 21 present in the 31.7 deg2 of the J-PLUS EDR. In a future version of the classifier, we will include J-PLUS colour information from twelve photometric bands., Comment: Submitted to Astronomy and Astrophysics. 14 pages, 16 figures, 1 tables. Comments are welcome. All extra figures and the number counts files will be available with the paper in press
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- 2018
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43. J-PLUS: The Javalambre Photometric Local Universe Survey
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Cenarro, A. J., Moles, M., Cristóbal-Hornillos, D., Marín-Franch, A., Ederoclite, A., Varela, J., López-Sanjuan, C., Hernández-Monteagudo, C., Angulo, R. E., Ramió, H. Vázquez, Viironen, K., Bonoli, S., Orsi, A. A., Hurier, G., Roman, I. San, Greisel, N., Vilella-Rojo, G., Díaz-García, L. A., Logroño-García, R., Gurung-López, S., Spinoso, D., Izquierdo-Villalba, D., Aguerri, J. A. L., Prieto, C. Allende, Bonatto, C., Carvano, J. M., Chies-Santos, A. L., Daflon, S., Dupke, R. A., Falcón-Barroso, J., Gonçalves, D. R., Jiménez-Teja, Y., Molino, A., Placco, V. M., Solano, E., Whitten, D. D., Abril, J., Antón, J. L., Bello, R., de Toledo, S. Bielsa, Castillo-Ramírez, J., Chueca, S., Civera, T., Díaz-Martín, M. C., Domínguez-Martínez, M., Garzarán-Calderaro, J., Hernández-Fuertes, J., Iglesias-Marzoa, R., Iñiguez, C., Ruiz, J. M. Jiménez, Kruuse, K., Lamadrid, J. L., Lasso-Cabrera, N., López-Alegre, G., López-Sainz, A., Maícas, N., Moreno-Signes, A., Muniesa, D. J., Rodríguez-Llano, S., Rueda-Teruel, F., Rueda-Teruel, S., Soriano-Laguía, I., Tilve, V., Valdivielso, L., Yanes-Díaz, A., Alcaniz, J. S., de Oliveira, C. Mendes, Sodré, L., Coelho, P., de Oliveira, R. Lopes, Tamm, A., Xavier, H. S., Abramo, L. R., Akras, S., Alfaro, E. J., Alvarez-Candal, A., Ascaso, B., Beasley, M. A., Beers, T. C., Fernandes, M. Borges, Bruzual, G. R., Buzzo, M. L., Carrasco, J. M., Cepa, J., Cortesi, A., Costa-Duarte, M. V., De Prá, M., Favole, G., Galarza, A., Galbany, L., Garcia, K., Delgado, R. M. González, González-Serrano, J. I., Gutiérrez-Soto, L. A., Hernandez-Jimenez, J. A., Kanaan, A., Kuncarayakti, H., Landim, R. C. G., Laur, J., Licandro, J., Neto, G. B. Lima, Lyman, J. D., Apellániz, J. Maíz, Miralda-Escudé, J., Morate, D., Nogueira-Cavalcante, J. P., Novais, P. M., Oncins, M., Oteo, I., Overzier, R. A., Pereira, C. B., Rebassa-Mansergas, A., Reis, R. R. R., Roig, F., Sako, M., Salvador-Rusiñol, N., Sampedro, L., Sánchez-Blázquez, P., Santos, W. A., Schmidtobreick, L., Siffert, B. B., and Telles, E.
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Astrophysics - Astrophysics of Galaxies ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
J-PLUS is an ongoing 12-band photometric optical survey, observing thousands of square degrees of the Northern hemisphere from the dedicated JAST/T80 telescope at the Observatorio Astrof\'isico de Javalambre. T80Cam is a 2 sq.deg field-of-view camera mounted on this 83cm-diameter telescope, and is equipped with a unique system of filters spanning the entire optical range. This filter system is a combination of broad, medium and narrow-band filters, optimally designed to extract the rest-frame spectral features (the 3700-4000\AA\ Balmer break region, H$\delta$, Ca H+K, the G-band, the Mgb and Ca triplets) that are key to both characterize stellar types and to deliver a low-resolution photo-spectrum for each pixel of the sky observed. With a typical depth of AB $\sim 21.25$ mag per band, this filter set thus allows for an indiscriminate and accurate characterization of the stellar population in our Galaxy, it provides an unprecedented 2D photo-spectral information for all resolved galaxies in the local universe, as well as accurate photo-z estimates ($\Delta\,z\sim 0.01-0.03$) for moderately bright (up to $r\sim 20$ mag) extragalactic sources. While some narrow band filters are designed for the study of particular emission features ([OII]/$\lambda$3727, H$\alpha$/$\lambda$6563) up to $z < 0.015$, they also provide well-defined windows for the analysis of other emission lines at higher redshifts. As a result, J-PLUS has the potential to contribute to a wide range of fields in Astrophysics, both in the nearby universe (Milky Way, 2D IFU-like studies, stellar populations of nearby and moderate redshift galaxies, clusters of galaxies) and at high redshifts (ELGs at $z\approx 0.77, 2.2$ and $4.4$, QSOs, etc). With this paper, we release $\sim 36$ sq.deg of J-PLUS data, containing about $1.5\times 10^5$ stars and $10^5$ galaxies at $r<21$ mag., Comment: Submitted to A&A
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- 2018
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44. The mean rotation rate of Venus from 29 years of Earth-based radar observations
- Author
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Campbell, Bruce A, Campbell, Donald B, Carter, Lynn M, Chandler, John F, Giorgini, Jon D, Margot, Jean-Luc, Morgan, Gareth A, Nolan, Michael C, Perillat, Phillip J, and Whitten, Jennifer L
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Venus ,Radar observations ,Rotational dynamics ,Astronomical and Space Sciences ,Geochemistry ,Geophysics ,Astronomy & Astrophysics - Abstract
We measured the length of the Venus sidereal day (LOD) from Earth-based radar observations collected from 1988 to 2017, using offsets in surface feature longitudes from a prediction based on a 243.0185d period derived from analysis of Magellan mission images over a 487-day interval. We derive a mean LOD over 29 years of 243.0212 ± 0.0006d. Our result is consistent with earlier estimates (but with smaller uncertainties), including those based on offsets between Venus Express infrared mapping data and Magellan topography that suggest a mean LOD of 243.0228 ± 0.002d over a 16-year interval. We cannot detect subtle, short-term oscillations in rate, but the derived value provides an excellent fit to observational data over a 29-year period that can be used for future landing-site planning.
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- 2019
45. The mean rotation rate of Venus from 29 years of Earth-based radar observations
- Author
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Campbell, BA, Campbell, DB, Carter, LM, Chandler, JF, Giorgini, JD, Margot, JL, Morgan, GA, Nolan, MC, Perillat, PJ, and Whitten, JL
- Subjects
Venus ,Radar observations ,Rotational dynamics ,Astronomical and Space Sciences ,Geochemistry ,Geophysics ,Astronomy & Astrophysics - Abstract
We measured the length of the Venus sidereal day (LOD) from Earth-based radar observations collected from 1988 to 2017, using offsets in surface feature longitudes from a prediction based on a 243.0185d period derived from analysis of Magellan mission images over a 487-day interval. We derive a mean LOD over 29 years of 243.0212 ± 0.0006d. Our result is consistent with earlier estimates (but with smaller uncertainties), including those based on offsets between Venus Express infrared mapping data and Magellan topography that suggest a mean LOD of 243.0228 ± 0.002d over a 16-year interval. We cannot detect subtle, short-term oscillations in rate, but the derived value provides an excellent fit to observational data over a 29-year period that can be used for future landing-site planning.
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- 2019
46. The importance of migratory connectivity for global ocean policy.
- Author
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Dunn, Daniel, Harrison, Autumn-Lynn, Curtice, Corrie, DeLand, Sarah, Donnelly, Ben, Fujioka, Ei, Heywood, Eleanor, Kot, Connie, Poulin, Sarah, Whitten, Meredith, Åkesson, Susanne, Alberini, Amalia, Appeltans, Ward, Arcos, José, Bailey, Helen, Ballance, Lisa, Block, Barbara, Blondin, Hannah, Boustany, Andre, Brenner, Jorge, Catry, Paulo, Cejudo, Daniel, Cleary, Jesse, Corkeron, Peter, Frisch-Nwakanma, Heidrun, Froján, Christopher, Gjerde, Kristina, Glowka, Lyle, Godley, Brendan, Gonzalez-Solis, Jacob, Granadeiro, José, Gunn, Vikki, Hashimoto, Yuriko, Hawkes, Lucy, Hays, Graeme, Hazin, Carolina, Jimenez, Jorge, Johnson, David, Luschi, Paolo, Maxwell, Sara, McClellan, Catherine, Modest, Michelle, Notarbartolo di Sciara, Giuseppe, Palacio, Alejandro, Palacios, Daniel, Pauly, Andrea, Rayner, Matt, Rees, Alan, Salazar, Erick, Secor, David, Sequeira, Ana, Spalding, Mark, Spina, Fernando, Van Parijs, Sofie, Wallace, Bryan, Varo-Cruz, Nuria, Virtue, Melanie, Weimerskirch, Henri, Wilson, Laurie, Woodward, Bill, Halpin, Patrick, Coyne, Michael, Crespo, Guillermo, Davies, Tammy, Dias, Maria, Douvere, Fanny, Ferretti, Francesco, Formia, Angela, Freestone, David, Costa, Daniel|Dan, and Friedlaender, Ari
- Subjects
area-based management ,areas beyond national jurisdiction ,marine spatial planning ,migratory species ,Animal Migration ,Animals ,Conservation of Natural Resources ,Ecosystem ,Environmental Policy ,Geography ,Oceans and Seas - Abstract
The distributions of migratory species in the ocean span local, national and international jurisdictions. Across these ecologically interconnected regions, migratory marine species interact with anthropogenic stressors throughout their lives. Migratory connectivity, the geographical linking of individuals and populations throughout their migratory cycles, influences how spatial and temporal dynamics of stressors affect migratory animals and scale up to influence population abundance, distribution and species persistence. Population declines of many migratory marine species have led to calls for connectivity knowledge, especially insights from animal tracking studies, to be more systematically and synthetically incorporated into decision-making. Inclusion of migratory connectivity in the design of conservation and management measures is critical to ensure they are appropriate for the level of risk associated with various degrees of connectivity. Three mechanisms exist to incorporate migratory connectivity into international marine policy which guides conservation implementation: site-selection criteria, network design criteria and policy recommendations. Here, we review the concept of migratory connectivity and its use in international policy, and describe the Migratory Connectivity in the Ocean system, a migratory connectivity evidence-base for the ocean. We propose that without such collaboration focused on migratory connectivity, efforts to effectively conserve these critical species across jurisdictions will have limited effect.
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- 2019
47. The importance of migratory connectivity for global ocean policy.
- Author
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Dunn, Daniel C, Harrison, Autumn-Lynn, Curtice, Corrie, DeLand, Sarah, Donnelly, Ben, Fujioka, Ei, Heywood, Eleanor, Kot, Connie Y, Poulin, Sarah, Whitten, Meredith, Åkesson, Susanne, Alberini, Amalia, Appeltans, Ward, Arcos, José Manuel, Bailey, Helen, Ballance, Lisa T, Block, Barbara, Blondin, Hannah, Boustany, Andre M, Brenner, Jorge, Catry, Paulo, Cejudo, Daniel, Cleary, Jesse, Corkeron, Peter, Costa, Daniel P, Coyne, Michael, Crespo, Guillermo Ortuño, Davies, Tammy E, Dias, Maria P, Douvere, Fanny, Ferretti, Francesco, Formia, Angela, Freestone, David, Friedlaender, Ari S, Frisch-Nwakanma, Heidrun, Froján, Christopher Barrio, Gjerde, Kristina M, Glowka, Lyle, Godley, Brendan J, Gonzalez-Solis, Jacob, Granadeiro, José Pedro, Gunn, Vikki, Hashimoto, Yuriko, Hawkes, Lucy M, Hays, Graeme C, Hazin, Carolina, Jimenez, Jorge, Johnson, David E, Luschi, Paolo, Maxwell, Sara M, McClellan, Catherine, Modest, Michelle, Notarbartolo di Sciara, Giuseppe, Palacio, Alejandro Herrero, Palacios, Daniel M, Pauly, Andrea, Rayner, Matt, Rees, Alan F, Salazar, Erick Ross, Secor, David, Sequeira, Ana MM, Spalding, Mark, Spina, Fernando, Van Parijs, Sofie, Wallace, Bryan, Varo-Cruz, Nuria, Virtue, Melanie, Weimerskirch, Henri, Wilson, Laurie, Woodward, Bill, and Halpin, Patrick N
- Subjects
Animals ,Animal Migration ,Conservation of Natural Resources ,Ecosystem ,Geography ,Oceans and Seas ,Environmental Policy ,area-based management ,areas beyond national jurisdiction ,marine spatial planning ,migratory species ,Biological Sciences ,Agricultural and Veterinary Sciences ,Medical and Health Sciences - Abstract
The distributions of migratory species in the ocean span local, national and international jurisdictions. Across these ecologically interconnected regions, migratory marine species interact with anthropogenic stressors throughout their lives. Migratory connectivity, the geographical linking of individuals and populations throughout their migratory cycles, influences how spatial and temporal dynamics of stressors affect migratory animals and scale up to influence population abundance, distribution and species persistence. Population declines of many migratory marine species have led to calls for connectivity knowledge, especially insights from animal tracking studies, to be more systematically and synthetically incorporated into decision-making. Inclusion of migratory connectivity in the design of conservation and management measures is critical to ensure they are appropriate for the level of risk associated with various degrees of connectivity. Three mechanisms exist to incorporate migratory connectivity into international marine policy which guides conservation implementation: site-selection criteria, network design criteria and policy recommendations. Here, we review the concept of migratory connectivity and its use in international policy, and describe the Migratory Connectivity in the Ocean system, a migratory connectivity evidence-base for the ocean. We propose that without such collaboration focused on migratory connectivity, efforts to effectively conserve these critical species across jurisdictions will have limited effect.
- Published
- 2019
48. The Prevalence of Fetal Alcohol Spectrum Disorders in An American Indian Community.
- Author
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Montag, Annika C, Romero, Rhonda, Jensen, Toni, Goodblanket, Amiyonette, Admire, Ami, Whitten, Conner, Calac, Daniel, Akshoomoff, Natacha, Sanchez, Maria, Zacarias, MarLa, Zellner, Jennifer A, Del Campo, Miguel, Jones, Kenneth Lyons, and Chambers, Christina D
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Humans ,Ethanol ,Prevalence ,Cross-Sectional Studies ,Child Behavior ,Alcohol Drinking ,Maternal Behavior ,Mothers ,Lactation ,Pregnancy ,Maternal-Fetal Exchange ,Adult ,Child ,Child ,Preschool ,Indians ,North American ,California ,Female ,Male ,Fetal Alcohol Spectrum Disorders ,American Indian Alaska Native ,fetal alcohol spectrum disorder ,prevalence ,Toxicology - Abstract
The prevalence of fetal alcohol spectrum disorders (FASD) differs among populations and is largely unknown among minority populations. Prevalence and characterization of FASD is necessary for prevention efforts and allocation of resources for treatment and support. However, prevalence data are lacking, including among many minority populations. The aim of this study was to obtain an FASD prevalence estimate in a Southern California American Indian community employing active case-ascertainment. In 2016, American Indian children aged 5-7 years and their caregivers were recruited in collaboration with Southern California Tribal Health Clinic. Children were assessed using physical examinations and neurobehavioral testing. Parent or guardian interviews assessed child behavior and prenatal exposures including alcohol. Of 488 children identified as eligible to participate, 119 families consented and 94 completed assessments to allow a classification for FASD. Participating children (n = 94) were an average of 6.61 ± 0.91 years old and half were female. Most interviews were conducted with biological mothers (85.1%). Less than one third (29.8%) of mothers reported consuming any alcohol in pregnancy and 19.1% met study criteria for risky alcohol exposure prior to pregnancy recognition. Overall 20 children met criteria for FASD, resulting in an estimated minimum prevalence of 41.0 per 1000 (4.1%). No cases of fetal alcohol syndrome (FAS) were identified; 14 (70.0%) met criteria for alcohol related neuro- developmental disorder (ARND). Minimum prevalence estimates found in this sample are consistent with those noted in the general population.
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- 2019
49. PDA-TOLERATE Trial: An Exploratory Randomized Controlled Trial of Treatment of Moderate-to-Large Patent Ductus Arteriosus at 1 Week of Age
- Author
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Clyman, Ronald I, Liebowitz, Melissa, Kaempf, Joseph, Erdeve, Omer, Bulbul, Ali, Håkansson, Stellan, Lindqvist, Johanna, Farooqi, Aijaz, Katheria, Anup, Sauberan, Jason, Singh, Jaideep, Nelson, Kelly, Wickremasinghe, Andrea, Dong, Lawrence, Hassinger, Denise C, Aucott, Susan W, Hayashi, Madoka, Heuchan, Anne Marie, Carey, William A, Derrick, Matthew, Fernandez, Erika, Sankar, Meera, Leone, Tina, Perez, Jorge, Serize, Arturo, Investigators, PDA-TOLERATE Trial, Fields, Scott, Nurses, NCRC, Whitten, Lora, Rogers, Stefanie, Okulu, Emel, Tunc, Gaffari, Ucar, Tayfun, Ünal, Ebru Türkoglu, Steen, Jane, Arnell, Kathy, Holtschlag, Sarah, Schreiber, Michael, Peters, Caryn, Gilmore, Maureen, McKay, Lorna, Carole, Dianne, Shaw, Annette, Harris, Malinda, Amsbaugh, Amy, Liedl, Lavonne M, Wolf, Sue, Groner, Avi, Kimball, Amy, Kim, Jae, Bridge, Renee, Knodel, Ellen, Weng, Chrissy, Barbosa, Magaly Diaz, Polin, Richard, Weindler, Marilyn, Noori, Shahab, Reese, Jeffrey, Sun, Yao, Hospital, Umea University, and Santa Clara Medical Center, Kaiser Permanente
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Paediatrics ,Biomedical and Clinical Sciences ,Preterm ,Low Birth Weight and Health of the Newborn ,Lung ,Perinatal Period - Conditions Originating in Perinatal Period ,Clinical Trials and Supportive Activities ,Pediatric ,Clinical Research ,Hematology ,Digestive Diseases ,Infant Mortality ,Reproductive health and childbirth ,Good Health and Well Being ,Acetaminophen ,Conservative Treatment ,Continuous Positive Airway Pressure ,Cyclooxygenase Inhibitors ,Ductus Arteriosus ,Patent ,Female ,Gestational Age ,Humans ,Ibuprofen ,Indomethacin ,Infant ,Extremely Premature ,Infant ,Newborn ,Male ,Prospective Studies ,Single-Blind Method ,Treatment Outcome ,PDA-TOLERATE (PDA: TO LEave it alone or Respond And Treat Early) Trial Investigators ,bronchopulmonary dysplasia ,necrotizing enterocolitis ,newborn ,premature birth ,retinopathy of prematurity ,Human Movement and Sports Sciences ,Paediatrics and Reproductive Medicine ,Pediatrics - Abstract
ObjectiveTo compare early routine pharmacologic treatment of moderate-to-large patent ductus arteriosus (PDA) at the end of week 1 with a conservative approach that requires prespecified respiratory and hemodynamic criteria before treatment can be given.Study designA total of 202 neonates of
- Published
- 2019
50. The impact of digital healthcare on vulnerable pregnant women: A review of the use of the MyCare app in the maternity department at a central London tertiary unit
- Author
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Poppy Pierce, Melissa Whitten, and Sara Hillman
- Subjects
electronic health records systems ,pregnancy ,e-health ,technology ,vulnerable pregnant women ,digital divide ,Medicine ,Public aspects of medicine ,RA1-1270 ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
IntroductionDigitalisation offers innovative solutions within maternity services; however, vulnerable groups risk being overlooked. University College London Hospital's (UCLH) successful implementation of a digital maternity app, MyCare, gives women access to test results, information about appointments, and enables communication with healthcare professionals (HCPs). Yet, little is known about access and engagement among vulnerable pregnant women.MethodologyResearch was conducted over a 3-month period (April–June 2022) in the Maternity Department at UCLH, UK. MyCare datasets were analysed, and anonymised surveys completed by vulnerable pregnant women and HCPs.ResultsLower rates of utilisation and engagement with MyCare were seen in vulnerable pregnant women especially among refugee/asylum seekers, those with mental health issues, and those facing domestic violence. Non-users were also more likely to be individuals from ethnic minority backgrounds, with a lower average social-deprivation-index decile, whose first language was not English, and with a significant history of non-attendance to appointments. Patient and HCP surveys highlighted various barriers to MyCare engagement, including a lack of motivation, limited language options, low e-literacy levels, and complex app interfaces.ConclusionThe use of a single digital tool, without a formulated pathway to identify and assist those not accessing or engaging with it, risks unequal care provision which may exacerbate health inequalities. This research advances the idea that digital exclusion is not necessarily a matter of access to technology, but an issue of a lack of engagement with these tools. Therefore, vulnerable women and HCPs must be integral to the implementation of digital strategies, to ensure no one is left behind.
- Published
- 2023
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