108 results on '"Tabarzad, Maryam"'
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2. Important structural features of antimicrobial peptides towards specific activity: Trends in the development of efficient therapeutics
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Fathi, Fariba, Alizadeh, Bahareh, Tabarzad, Mohammad Vahid, and Tabarzad, Maryam
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- 2024
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3. Culture Optimization to Produce High Yields of Mycosporine-Like Amino Acids by Fischerella sp. F5
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Salehian, Shayan, Saadatbakht, Melika, Tabarzad, Maryam, and Hosseinabadi, Tahereh
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- 2023
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4. Promising anti-inflammatory activity of a novel designed anti-microbial peptide for wound healing
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Fathi, Fariba, Ghobeh, Maryam, Shirazi, Farshad H., and Tabarzad, Maryam
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- 2024
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5. Ultrasensitive detection of vital biomolecules based on a multi-purpose BioMEMS for Point of care testing: digoxin measurement as a case study
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Marvi, Fahimeh, Jafari, Kian, Shahabadi, Mahmoud, Tabarzad, Maryam, Ghorbani-Bidkorpeh, Fatemeh, and Azad, Taha
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- 2024
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6. Anti-Microbial Peptides: Strategies of Design and Development and Their Promising Wound-Healing Activities
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Fathi, Fariba, Ghobeh, Maryam, and Tabarzad, Maryam
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- 2022
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7. In silico design of novel aptamers utilizing a hybrid method of machine learning and genetic algorithm
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Torkamanian-Afshar, Mahsa, Nematzadeh, Sajjad, Tabarzad, Maryam, Najafi, Ali, Lanjanian, Hossein, and Masoudi-Nejad, Ali
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- 2021
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8. Enhancing Mycosporine-Like Amino Acids (MAAs) Extraction Yield from Fischerella sp. F5 using Experimental Design.
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Saadatbakht, Melika, Hosseinabadi, Tahereh, and Tabarzad, Maryam
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MYCOSPORINE-like amino acids ,CYANOBACTERIA ,ANTIOXIDANTS ,PHYTOCHEMICALS ,BIOACTIVE compounds - Abstract
The article focuses on optimizing the extraction yield of mycosporine-like amino acids (MAAs) from Fischerella sp. F5 using experimental design techniques. It reports that while extraction conditions positively influenced MAAs content, no significant model was established for MAAs purity or antioxidant activity, suggesting a need for further research to refine extraction methods and enhance bioactivity of MAAs extracts.
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- 2024
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9. RPINBASE: An online toolbox to extract features for predicting RNA-protein interactions
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Torkamanian-Afshar, Mahsa, Lanjanian, Hossein, Nematzadeh, Sajjad, Tabarzad, Maryam, Najafi, Ali, Kiani, Farzad, and Masoudi-Nejad, Ali
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- 2020
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10. Anti-inflammatory Activity of Bioactive Compounds from Microalgae and Cyanobacteria by Focusing on the Mechanisms of Action
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Tabarzad, Maryam, Atabaki, Vahideh, and Hosseinabadi, Tahereh
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- 2020
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11. Preliminary study on the effect of nucleolin specific aptamer–miRNA let-7d chimera on Janus kinase-2 expression level and activity in gastric cancer (MKN-45) cells
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Ramezanpour, Mahsa, Daei, Puyan, Tabarzad, Maryam, Khanaki, Korosh, Elmi, Ali, and Barati, Mahmood
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- 2019
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12. Nano-delivery system targeting to cancer stem cell cluster of differentiation biomarkers
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Mokhtarzadeh, Ahad, Hassanpour, Soodabeh, Vahid, Zahra Farajzadeh, Hejazi, Maryam, Hashemi, Maryam, Ranjbari, Javad, Tabarzad, Maryam, Noorolyai, Saeed, and de la Guardia, Miguel
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- 2017
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13. Chapter 12 - Functionalized peptide and protein-based nanomaterials for cancer therapy
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Tabarzad, Maryam, Mohit, Elham, and Ahmadi, Fatemeh Maghsood
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- 2024
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14. Chapter 14 - Functionalized phytosomes for cancer therapy
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Ghorbani-Bidkorpeh, Fatemeh, Tabarzad, Maryam, Hosseinabadi, Tahereh, Masoumi, Niloofar, and Akhtari, Negin
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- 2024
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15. Therapeutic applications of nucleic acid aptamers in microbial infections
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Afrasiabi, Shima, Pourhajibagher, Maryam, Raoofian, Reza, Tabarzad, Maryam, and Bahador, Abbas
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- 2020
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16. Synthesis and evaluation of Escitalopram-loaded niosomes on colon cancer cell lines.
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Yeganeh, Faten Eshrati, Tabarzad, Maryam, Khazraei, Hajar, and Bourbour, Mahsa
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COLON cancer , *CANCER cells , *CELL lines , *SEROTONIN uptake inhibitors , *CYTOTOXINS - Abstract
Introduction: It has been approved that selective serotonin reuptake inhibitors (SSRIs) may exhibit anti-proliferative or cytotoxic effects on several types of cancers. The aim of the present study was to evaluate the cytotoxic effects of a newly formulated niosome of Escitalopram oxalate on a colorectal cancer cell line. Methods: The niosomes were prepared using a thin layer hydration method, resulting in particles with a size range between 150 – 450 nm and spherical morphology. Moreover, its permeability release showed 25% in 4 hours. The cytotoxicity evaluation was performed using a quantitative colorimetric MTT assay. Results: The cell viability of colon cancer cells after treatment with niosomes and pure escitalopram reduced to 28.3 ± 0.83 % and 24.07 ± 0.56%, respectively. However, the cytotoxicity assay of escitalopram-loaded niosomes suggested that the anti-proliferative effect of the niosomal formulation of escitalopram was dose and incubation time-dependent. Conclusion: These results confirm the potential of the anti-proliferative activity of escitalopram-loaded niosomes. Further application to an in vivo model is needed to study various pharmacokinetic and pharmacodynamics parameters to establish its complete therapeutic potential. [ABSTRACT FROM AUTHOR]
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- 2023
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17. Optimisation of experimental conditions for binding of divalent iron to bioactive casein phosphopeptides
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Delshadian, Zohre, Mortazavian, Amir Mohammad, Tabarzad, Maryam, Hosseini, Seyede Marzieh, Mohammadi, Reza, Rouhi, Milad, Salami, Maryam, and Khosravi‐Darani, Kianoush
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- 2018
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18. Insight into the Infectious Diseases Associated with Celiac Disease: A Guild to Novel Approaches for Diagnosis and Treatment.
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Foroughinia, Farzaneh, Ansari, Ramin, and Tabarzad, Maryam
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BACTERIAL disease risk factors ,CELIAC disease complications ,COMMUNICABLE disease treatment ,COMMUNICABLE disease diagnosis ,HEPATITIS B ,GIARDIASIS ,COMMUNICABLE diseases ,RETROVIRUS diseases ,CAMPYLOBACTER infections ,RISK assessment ,CELIAC disease ,VIRUS diseases ,MYCOSES ,PARASITIC diseases ,INFLUENZA ,PROTOZOAN diseases ,LITERATURE reviews ,HELICOBACTER diseases ,ANTIBIOTICS ,DISEASE risk factors - Abstract
Background: Celiac disease (CD) is one of the most common and chronic immune-mediated disorders of the gastrointestinal tract that affects the small intestine. Genetic factors, including human leukocyte antigen (HLA), and non-HLA genes are major risk factors in CD pathology. Moreover, environmental factors such as infections may affect CD incidence. Materials and Methods: The goal of the present study is to investigate the association between CD and viral, bacterial, fungal, and parasitic infections. Databases including Scopus, PubMed, Google Scholar, and Web of Science were searched for relevant literature until 2022. Results: Several infections have been reported to be associated with CD including reovirus, rotavirus, hepatitis B virus, influenza virus, helicobacter pylori, campylobacter jejuni, giardia lamblia, toxoplasma gondii, candida albicans, etc. Conclusion: Moreover, antibiotic administration might be a risk factor for further CD development. On the other hand, there are reports regarding the susceptibility of patients with CD to some infections, as well as protective infections against CD. Consequently, more studies are required to explain the two-sided relations between CD and infectious diseases. [ABSTRACT FROM AUTHOR]
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- 2023
19. Trends in the Design and Development of Specific Aptamers Against Peptides and Proteins
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Tabarzad, Maryam and Jafari, Marzieh
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- 2016
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20. Chapter 12 - Nanovaccines delivery approaches against infectious diseases
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Tabarzad, Maryam, Mohit, Elham, and Ghorbani-Bidkorbeh, Fatemeh
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- 2022
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21. List of contributors
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Agwamba, Ernest C., Ahadian, Samad, Ahmadi, Fatemeh Maghsood, Ahmadian, Roohollah, Akbari, Babak, Akhtari, Negin, Alarcin, Emine, Alem, Halima, Ancira-Cortez, Alejandra, Aref, Amir Reza, Avci-Adali, Meltem, Ayran, Musa, Azarian, Maryam, Bal-Öztürk, Ayça, Barabadi, Hamed, Barati, Maedeh, Bardouni, Mohammad Mahdi, Barzegar, Sajjad, Bilakaya, Besa, Bozlar, Michael, Bozorgchami, Negar, Camlik, Gamze, Cekuc, Mehmet Sertac, Chakafana, Graham, Chakraborty, Gulmi, Chhikara, Nidhi, Cruz-Nova, Pedro, Davari-Kia, Kamyar, De, Ranjit, Degim, Ismail Tuncer, Degim, Zelihagul, Eivazzadeh-Keihan, Reza, Ezati, Negin, Farahani, Ehsan Ortegoli, Farani, Marzieh Ramezani, Fateh, Sahand Tehrani, Fateh, Sepand Tehrani, Fatehi, Dorin, Ghorbani-Bidkorpeh, Fatemeh, Gibbens-Bandala, Brenda, Goshtasbi, Nazanin, Gunduz, Oguzhan, Haeri, Azadeh, Hakimi, Fatemeh, Hamidi, Mehrdad, Hashemi, Atieh, Hassan, Moustapha, Hojjati, Saba, Hosseinabadi, Tahereh, Hosseinpour-Moghadam, Reza, Huh, Yun Suk, Imani, Mahsa, Ipek, Tuba Canak, Jabbari, Farzaneh, Jahani, Reza, Jounaki, Kamyar, Kakavand, Melika, Karami, Kimiya, Karslı, Seher, Katerere, David R., Kaushik, Ajeet, Khajeamiri, Yasaman, Khan, Sofia, Khoramipour, Mahsa, Khoskam, Maryam, Koyuncuoglu, Rumeysa, Kumar, Anuj, Kumar, Govindarajan V., Kumar, Krishan, Kumari, Sonika, Lalebeigi, Farnaz, Lim, Vuanghao, Lotfi, Malihe, Lotfi, Mohammad Javad, Mahata, Manoj Kumar, Makwikwi, Tendai, Maleki, Ali, Maleki, Aziz, Maleksabet, Hanieh, Manicum, Amanda-Lee E., Masoumi, Niloofar, Mehryab, Fatemeh, Meléndez-Alafort, Laura, Merati, Faezeh, Mirshafiyan, Mahshad, Moammeri, Ali, Mohit, Elham, Moradi, Ashkan, Mortazavi, Seyed Alireza, Mortazavi, Seyedeh Maryam, Mosayebnia, Mona, Mostafavi, Ebrahim, Movahed, Mahsa Azami, Naderi, Nooshin, Naei, Vahid Yaghoubi, Namazifard, Saina, Nasiri, Azadeh, Nasri, Negar, Nazari, Hojjatollah, Nejati, Omid, Noqani, Hesam, Ocampo-García, Blanca, Ozarici, Huseyin Berkay, Özcan-Bülbül, Ece, Preetam, Subham, Rad, Dorsa Morshedi, Ramazani, Ali, Rath, Rajeswari, Reeves, Sheena M., Rezaei, Niloufar, Rostami, Sanaz, Saadatidizaji, Zahra, Sabzini, Mahdi, Sadat, Zahra, Sadighian, Somayeh, Sadri, Bahareh, Sahrayi, Hamidreza, Saleemi, Mansab Ali, Salehi-Najafabadi, Amir, Samadi, Amirmasoud, Sanyal, Rupa, Sarrami Foroushani, Elnaz, Seyedhamzeh, Mohammad, Shamsabadipour, Amin, Sharma, Ajay, Sharma, Anil Kumar, Sharma, Anirudh, Sharma, Saurabh, Sharma, Varruchi, Singh, Jasdeep, Song, Yo Han, Soni, Savita, Sood, Ankur, Subudhi, P. Debishree, Tabarzad, Maryam, Tabatabaei, Mahsa Seyed, Taghizadeh, Fatemeh, Tayebi, Lobat, Ulag, Songul, Uyar, Perihan, Vosough, Massoud, Warkiani, Majid Ebrahimi, Yavari, Maryam, Yaşayan, Gökçen, Yildiz, Irem, Zare, Iman, Zare, Mohammad Reza, Zarepour, Atefeh, Zarkesh, Ibrahim, and Zarrabi, Ali
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- 2024
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22. The Epigenetic Regulation of Blinatumomab Gene Expression: Tumor Cell-dependent T cell Response against Lymphoma Cells and Cytotoxic Activity
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Naddafi, Fatemeh, Mahboudi, Fereidoun, Tabarzad, Maryam, Aliabadi Farahani, Zahra, Hosein. Shirazi, Farshad, and Davami, Fatemeh
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BiTE ,Blinatumomab ,T-cell activation ,Original Article ,refractory acute lymphoid leukemia ,therapeutic anti- CD19 mAb - Abstract
Conventional treatment for cancer such as surgical resection and chemotherapy can cause damage in cases with advanced cancers. Moreover, the identification of tumor-specific targets has great importance in T-cell therapies. For decades, T cell activity has been stimulated to improve anti-tumor activity. Bispecific antibodies have attracted strong interest from pharmaceutical companies, for their diagnostic and therapeutic use. Blinatumomab is a first-in-class bispecific T engager antibody for the treatment of relapsed or refractory precursor B- cell acute lymphoblastic leukemia. But, it can benefit several cases with CD19+ malignancies in the future. PhiC31 integrase-based vectors could selectively integrate therapeutic transgenes into pseudo-attP sites in CHO genome. In this study, production of Blinatumomab in CHO cells using this type of vectors was investigated. We evaluated the effects of histone deacetylases (HDACs) inhibitors such as sodium butyrate and valproic acid, on specific productivity and cell viability of antibody expressing cells. Although sodium butyrate increased specific productivity about 1.7-fold and valproic acid about 1.4-fold, valproic acid was found more efficient because of its less cytotoxic effect on cell growth. We examined the efficacy of expressed Blinatumomab at various effector to target (E/T) ratios. A dose-response analyses of calcein-acetoxymethyl release assay illustrated that the effective dose of expressed mAb required for antibody mediated cytotoxicity was 100 ng/ml and the expressed mAb was more effective at E/T ratios of 10:1 and 5:1. Results of this study indicated that the expressed blinatumomab can be useful for enhancing the cytotoxicity of CD3+ T-cells against CD19 + target cells in vitro.
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- 2019
23. Can Aptameric Ligands Specific to Plasma Coagulation Factor VII Bind the Recombinant Form with High Affinity: Affinity Measurement by Fluorescence Method
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Tabarzad, Maryam, Jafari, Marzieh, and Nafissi-varcheh, Nastaran
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Affinity ,Aptamer ,Short Communication ,Factor VIIa ,Fluorescence - Abstract
Background: Among diverse protein purification systems, affinity chromatography is the most attractive one in the purification process of coagulation factors. Coagulation factor VII is a plasma serine protease that has a significant role in natural human hemostasis and its recombinant form such as AryoSeven™, has been applied in clinical treatment of bleeding disorders. Immunoaffinity chromatography is the purification method of choice that is currently applied in the development of coagulation factor VIIa products. Aptamers as nucleic acid based affinity ligands are more promising than monoclonal antibodies. In addition, DNA aptamers are more acceptable than RNA ones in this regard. Methods: In this study, two of the aptameric DNA oligonucleotides that showed acceptable affinities for purification of coagulation factor VIIa from plasma, were selected to evaluate their affinity against Aryoseven. A serial dilution of fluorescence labeled aptamers was incubated against the concentration of 1 nM from Aryoseven. Then, a fluorescence index was calculated according to the fluorescence intensity data measured from test and control samples. The dissociation constant of aptamers was calculated according to the fluorescence index using Prism5 software. Results: Results showed that the binding affinity of the 44 nucleotide aptamer was more than 81 nucleotide aptamer sequence. As a result, this aptamer could be optimized in order to develop aptamer based affinity chromatography process for this form of recombinant coagulation factor VIIa. Discussion: Aptamers with shorter length of sequence could show higher affinity in target binding, as they could adapt more easily to suitable conformation according to target interaction. However, it should be considered that the selectivity of affinity ligands is also important for target purification and analytical applications.
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- 2017
24. Synthesis, Evaluation of Pharmacological Activities and Quantitative Structure–Activity Relationship Studies of a Novel Group of bis(4-Nitroaryl-1,4-dihyropyridine)
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Miri, Ramin, Javidnia, Katayoun, Hemmateenejad, Bahram, Tabarzad, Maryam, and Jafarpour, Mehrnaz
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- 2009
25. Contributors
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Abolmaali, Samira S., Ahadian, Samad, Ahmadi, Mahnaz, Akhlaghi, Sarah, Alimardani, Vahid, Aminudin, Nurul I., Asadian, Elham, Ashammakhi, Nureddin, Ashkarran, Ali A., Asmelash, Tsehaye, Balhaddad, Abdulrahman A., Barabadi, Hamed, Bardouni, Mohammad M., Bayat, Fereshteh, Borhan, Ali, Bălăceanu, Beatrice, Cholula-Díaz, Jorge L., Collares, Fabrício M., Danial, Wan H., Darbasizadeh, Behzad, Derakhshi, Maryam, Esquivel-López, Ivana Gabriela, Farahavar, Ghazal, Feyzi-barnaji, Bahareh, Gandomkarzadeh, Marzieh, Garcia, Isadora M., Gayathri, M., Gebrecherkos, Teklay, Ghorbani-Bidkorbeh, Fatemeh, Gorji-bahri, Gilar, Gurău, Cristian-Dorin, Haeri, Azadeh, Hamidi, Sarvin, Hamzah, Nurasyikin, Hashemi, Atieh, Holban, Alina-Maria, Ion, Ana, Ismail, Mohamad W., Kanada, Masamitsu, Karimi, Maede, Kayalan, Irmak C., Khezri, Fatemeh, Lazăr, Veronica, Lotfi, Mohammad J., Mahboubi, Arash, Martínez-Sanmiguel, Juan J., Masoudifar, Reyhane, Medina-Cruz, David, Mehryab, Fatemeh, Melo, Mary Anne S., Mihai, Mara Mădălina, Moghimi, Hamid Reza, Mohit, Elham, Mokeem, Lamia, Mortazavi, Seyedeh Maryam, Mosayebnia, Mona, Mostafavi, Ebrahim, Movahed, Mahsa A., Murugan, Arumugam, Muzaddadi, Ijaz U., Naderi, Nima, Najafi, Haniyeh, Nazari, Maryam, Pishva, Parsa, Pon Janani, S., Pouyanfar, Niki, Pérez, Yeremi, Ravikumar, C.R., Rezaee, Elham, Saravanan, Muthupandian, Sefat, Farshid, Sehgal, Rakesh, Sert, Fatma, Shafiee, Mina, Shafiee, Saiful A., Shahbazi, Mohammad-Ali, Sinha, Shweta, Soto-Mendoza, Adrián, Susanti, Deny, Swaminathan, Akila, Tabarzad, Maryam, Taher, Muhammad, Tamaddon, Ali M., Tanideh, Nader, Theijeswini, R.C., Thillai Arasu, P., Truong, Linh B., Walker, Jordan C., Yadav, Nagendra N., Yadav, Hardeo S., and Yüce, Meral
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- 2022
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26. Silymarin antiproliferative and apoptotic effects: Insights into its clinical impact in various types of cancer.
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Hosseinabadi, Tahereh, Lorigooini, Zahra, Tabarzad, Maryam, Salehi, Bahare, Rodrigues, Célia F., Martins, Natália, Sharifi‐Rad, Javad, and Sharifi-Rad, Javad
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THERAPEUTIC use of antineoplastic agents ,THERAPEUTIC use of antioxidants ,TUMOR classification ,ANTINEOPLASTIC agents ,APOPTOSIS ,CELL cycle ,CELL physiology ,CLINICAL drug trials ,FLAVONOIDS ,TUMORS ,MILK thistle ,PATHOLOGIC neovascularization ,PHARMACODYNAMICS - Abstract
Silymarin is a complex extract isolated from the plant Silybum marianum, widely known for its prominent antioxidant and hepatoprotective effects, although increasing evidences have reported extraordinary antiproliferative and apoptotic abilities. As a result, several signaling pathways involved in cell cycle control, cell proliferation, and cell death have been deconvoluted as critical mechanisms. In this regard, cyclin and cyclin-dependent pathways have been the most studied ones. Following that, apoptotic pathways, such as p53, Akt, STAT-3, Ras, and caspases pathways, have been extensively studied, although other mechanisms involved in inflammation and angiogenesis have also been highlighted as silymarin-likely targets in cancer therapy. Therefore, the main challenge of this review is to discuss the diverse molecular mechanisms for silymarin antiproliferative and apoptotic effects; most of them largely studied in various types of cancers so far. Clinical trials and combination therapies related to silymarin application in cancer prevention and treatment are presented as well. [ABSTRACT FROM AUTHOR]
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- 2019
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27. A comparative study of the bispecific monoclonal antibody, blinatumomab expression in CHO cells and E. coli.
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Naddafi, Fatemeh, Shirazi, Farshad H., Talebkhan, Yeganeh, Tabarzad, Maryam, Barkhordari, Farzaneh, Aliabadi Farahani, Zahra, Bayat, Elham, Moazzami, Reza, Mahboudi, Fereidoun, and Davami, Fatemeh
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MONOCLONAL antibodies ,PROTEIN expression ,ESCHERICHIA coli ,GENETIC vectors ,CHROMATOGRAPHIC analysis - Abstract
The "bispecifics" market improved over the past decade due to the development of many technological platforms including bispecific T cell engagers (BiTEs). The approval of blinatumomab, the most advanced bispecific T-cell engager (BiTE) in clinical trials, can be a significant milestone in the development of bispecific antibodies. Both Chinese hamster ovary (CHO) cells and E. coli strain are considered as the most widely used hosts for the large-scale production of therapeutic monoclonal antibodies. Since both of the economic and qualitative aspects of protein production are important in industry, selection of a suitable protein expression system is very critical. The BsAb gene was cloned into the expression vectors FC550A-1, pcDNA3.1 (+), and PET22b and 6 × His-tagged BsAb then purified on a Ni-NTA chromatography column. Both SDS-PAGE and Western blotting analysis of the purified protein demonstrated that blinatumomab was successfully expressed as a 55 kDa in both expression systems. The antigen-binding properties of blinatumomab were compared in the mammalian system versus Escherichia coli. The results showed that the purified antibody from a mammalian expression system has better binding activity than the one from E. coli host. [ABSTRACT FROM AUTHOR]
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- 2018
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28. Covalent immobilization of coagulation factor VIII on magnetic nanoparticles for aptamer development.
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Tabarzad, Maryam, Sharafi, Zeinab, and Javidi, Jaber
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DRUG development , *APTAMERS , *NANOMEDICINE , *MICROENCAPSULATION , *BLOOD coagulation factors , *MAGNETIC nanoparticles - Abstract
Introduction: Magnetic nanoparticles (MNPs) are one of the most useful particulate systems in analytical applications such as specific aptamer selection. Proteins are the most noted targets of aptamer selection. Generally, covalently immobilized protein coated MNPs are more stable structures. Methods: In this study, coagulation factor VIII (FVIII) was immobilized on MNPs. A silica coating provided isocyanate functional groups was considered to interact covalently with reactive groups of the protein, resulting in a stable protein immobilization. The reactions was run in dried toluene. At end, these MNPs were applied for affinity determination of a previously selected FVIII specific aptamers. Results: Immobilization of 1 mg FVIII (~ 3 nmol) on 5 mg particles was achieved with no significant particle aggregation. Using a fluorescence-based method, affinity measurement resulted in a calculated dissociation constant of 120 ± 5.6 nM for the FVIII-specific aptamer to the FVIII-coated MNPs. Conclusion: The final product could be a suitable protein-coated solid support for magnetic-based aptamer selection processes. [ABSTRACT FROM AUTHOR]
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- 2018
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29. Aptamer-based Targeted Delivery of miRNA let-7d to Gastric Cancer Cells as a Novel Anti-Tumor Therapeutic Agent.
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Daei, Puyan, Ramezanpour, Mahsa, Khanaki, Korosh, Tabarzad, Maryam, Nikokar, Iraj, CH, Mojtaba Hedayati, and Elmi, Ali
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GASTRIC diseases ,APTAMERS ,MICRORNA ,ANTINEOPLASTIC agents ,FIBROBLASTS - Abstract
miRNAs as one of the potential therapeutic agents have been recently considered for cancer treatment. AS1411 (aptNCL) is a DNA aptamer specifically binding to nucleolin protein on the cancer cell surface with antiproliferative effect. The aim of the study was to develop a conjugate consisting of aptNCL (as targeted delivery of therapeutic agent) and miRNA let-7d (as a tumor suppressor) using two different linking methods and also to evaluate the potential effect of the conjugates on the proliferation of gastric cancer (MKN-45) cell line compared to negative control cell line of human dermal fibroblast (HDF). Conjugation was performed covalently by SM (PEG)2 as a bifunctional crosslinker (conjugate-1) and noncovalently, using 19bp complementary sticky end sequences (conjugate-2). Nucleolin positive MKN-45 and nucleolin negative HDF cells were cultured and treated with the conjugates. Then, the changes in let-7d expression and cell proliferation were determined using Real-time PCR and MTT methods, respectively. In MKN-45 cells, the conjugates caused significant increase in let7-d uptake compared with HDF cells (P = 0.0001). The conjugate-1, likely due to its higher stability compared with the conjugate-2, led to significantly more increase in intracellular let-7d in MKN-45 cells (30 fold versus 15 fold, respectively, P = 0.0001). The conjugates revealed more potent antiproliferative effect against gastric cancer cells compared with aptNCL alone (P = 0.0001). It was found that the aptNCL-let-7d conjugate efficiently carried let-7d into the cancer cells. Also, it appears that in the setting of aptNCL-let-7d conjugate, let-7d and aptNCL moieties could cooperate and synergistically exhibit the antiproliferative effect on cancer cells. [ABSTRACT FROM AUTHOR]
- Published
- 2018
30. DNAzyme–aptamer or aptamer–DNAzyme paradigm: Biochemical approach for aflatoxin analysis.
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Jafari, Marzieh, Rezaei, Mohsen, Kalantari, Heibatullah, Tabarzad, Maryam, and Daraei, Bahram
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DNA ,ENZYMES ,APTAMERS ,AFLATOXIN genetics ,PEROXIDASE - Abstract
Abstract: DNAzyme and aptamer conjugations have already been used for sensitive and accurate detection of several molecules. In this study, we tested the relationship between conjugation orientation of DNAzyme and aflatoxin B1 aptamer and their subsequent peroxidase activity. Circular dichroism (CD) spectroscopy and biochemical analysis were used here to differentiate between these two conjugation patterns. Results showed that DNAzyme–aptamer has more catalytic activity and efficiency than aptamer–DNAzyme. Thereby, DNAzyme–aptamer with its superior efficiency can be used for design and development of more sensitive aflatoxin B1 DNA based biosensors. [ABSTRACT FROM AUTHOR]
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- 2018
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31. Studying the Effect of using an Educational Booklet Based on Augmented Reality Technology on the Lab Skills of Pharmacy Students.
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Mirmoghtadaie, Zohrehsadat, Hosseinabadi, Tahereh, and Tabarzad, Maryam
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PHARMACY students ,AUGMENTED reality ,EDUCATIONAL technology ,EDUCATIONAL planning ,DIGITAL learning ,PAMPHLETS - Abstract
Background: One of the most challenges in electronic learning (e-learning) is practical lab courses. The widespread use of smart phone devices, as well as the access to internet networks, have made augmented reality (AR) increasingly popular in educational systems in recent years. Objective: This study investigated the effect of using augmented reality on the learning and lab-skills of pharmacy students. Material and Methods: The traditional booklet of the course was revised and the experiments videos were added to the booklet using AR technology. Around 80 students were randomly divided into two intervention and control groups with almost equal numbers. Learning and practical skills of the students was assessed. Results: The mean of scores, from 3 points, in pre-test of control and intervention groups were 2.3 and 2.56, respectively, and in post-test were 1.97 and 1.73, respectively. The mean score of lab skills for control and intervention groups were 4 and 4.6 from 5 points, respectively. There was no significant difference between two groups on the pre- and post-test, and fairly in lab skills. However, a significant decrease in the port-test compared to pre-test was seen in intervention group. Moreover, several features of lab skills were improved significantly in intervention group. It seems that students' cooperation in the project implementation was not acceptable. In general, the use of the simplest form of augmented reality technology was able to create an acceptable satisfaction in pharmacy students. Conclusion: This type of AR-based booklets can be considered as promising educational strategy for medical students. [ABSTRACT FROM AUTHOR]
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- 2023
32. Optimization of Aflatoxin B1 Aptasensing.
- Author
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Jafari, Marzieh, Rezaei, Mohsen, Kalantari, Heibatullah, Tabarzad, Maryam, and Daraei, Bahram
- Subjects
MATHEMATICAL optimization ,AFLATOXINS ,DEOXYRIBOZYMES ,MYCOTOXINS ,COLORIMETRIC analysis - Abstract
Combination of aptamers with DNAzymes attracted intense attention for development of DNA-based biosensors for detection of mycotoxins. In the present study a combination of aflatoxin B1 specific aptamer and HRP- (horseradish peroxidase-) mimicking DNAzyme was optimized for detecting aflatoxin B1. Detecting approach is based on the binding affinity of aflatoxin B1 to its specific aptamer and conversion of substrate to a detectable colorimetric signal by a linked DNAzyme. Compared to conventional methods for aflatoxin B1 detection, DNA-based assay has the advantages of low cost, long-term stability, and rapid, simple, and user-friendly steps. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
33. Challenges to Design and Develop of DNA Aptamers for Protein Targets. II. Development of the Aptameric Affinity Ligands Specific to Human Plasma Coagulation Factor VIII Using SEC-SELEX.
- Author
-
Vahidi, Hossein, Nafissi-Varcheh, Nastaran, Kazemi, Bahram, Aboofazeli, Reza, Shahhosseini, Soraya, and Tabarzad, Maryam
- Subjects
BLOOD coagulation factors ,COLLOIDS ,BLOOD coagulation ,DEOXYRIBOSE ,DNA - Abstract
Protein specific aptamers are highly applicable affinity ligands in different fields of research and clinical applications. They have been developed against various targets, in particular, biomacromolecules such as proteins. Among human proteins, the coagulation factors are the most attractive targets for aptamer selection and their specific aptamers have valuable characteristics in therapeutic and analytical applications. In this study, a plasma derived coagulation factor VIII was considered as the protein target for DNA aptamer selection using size exclusion chromatography-SELEX. Potential aptameric oligonucleotides with high affinity and specificity were achieved during eight rounds of selection. Binding affinity constant of selected aptamer and aptameric enriched pool were in nanomolar range that was comparable to monoclonal antibodies. Further improvement studies can result in aptamers that are more promising as an industrial affinity ligand for the purification of anti-hemophilia factor from plasma source. [ABSTRACT FROM AUTHOR]
- Published
- 2017
34. Simultaneous detection of bovine and porcine DNA in pharmaceutical gelatin capsules by duplex PCR assay for Halal authentication.
- Author
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Nikzad, Jafar, Shahhosseini, Soraya, Tabarzad, Maryam, Nafissi-Varcheh, Nastaran, and Torshabi, Maryam
- Subjects
DNA analysis ,ANIMALS ,BIOLOGICAL assay ,PHARMACEUTICAL encapsulation ,CATTLE ,ISLAM ,MEAT ,MITOCHONDRIA ,PHARMACOLOGY ,POLYMERASE chain reaction ,PROTEINS ,SWINE ,DESCRIPTIVE statistics - Abstract
Background: In the pharmaceutical industry, hard- and soft-shelled capsules are typically made from gelatin, commonly derived from bovine and porcine sources. To ensure that pharmaceutical products comply with halal regulations in Muslim countries (no porcine products allowed), development of a valid, reliable, quick, and most importantly, cost-effective tests are of utmost importance. Methods: We developed a species-specific duplex polymerase chain reaction (PCR) assay targeting 149 bp porcine and 271 bp bovine mitochondrial DNA (mtDNA) to simultaneously detect both porcine and bovine DNA (in one reaction at the same time) in gelatin. Some additional simplex PCR tests (targeting 126 bp bovine and 212 bp porcine mtDNA) and real-time PCR using a commercially available kit (for identification of porcine DNA) were used to verify the selectivity and sensitivity of our duplex PCR. After optimization of DNA extraction and PCR methods, hard/soft pharmaceutical gelatin capsules (containing drug) were tested for the presence of porcine and/or bovine DNA. Results: Duplex PCR detected the presence of as little as 0.1% porcine DNA, which was more accurate than the commercially available kit. Of all gelatin capsules tested (n = 24), 50% contained porcine DNA (pure porcine gelatin alone or in combination with bovine gelatin). Conclusions: Duplex PCR presents an easy-to-follow, quick, low-cost and reliable method to simultaneously detect porcine and bovine DNAs (>100 bp) in minute amounts in highly processed gelatin-containing pharmaceutical products (with a 0.1% sensitivity for porcine DNA) which may be used for halal authentication [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
35. Aptamers as smart ligands for nano-carriers targeting.
- Author
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Mokhtarzadeh, Ahad, Tabarzad, Maryam, Ranjbari, Javad, de la Guardia, Miguel, Hejazi, Maryam, and Ramezani, Mohammad
- Subjects
- *
DRUG delivery systems , *APTAMERS , *LIGANDS (Chemistry) , *NANOCARRIERS , *DRUG development - Abstract
The development of enhanced drug delivery systems is one of the most attractive fields of pharmaceutical sciences, as some of the highly effective chemo/biotherapeutics for cancer treatment can not be administrated due to their high toxicities for normal cells or low stability in physiological media. However, drugs that are currently not administrable will become valuable if specific cell-targeted drug carriers can protect the normal cells from adverse effects and also improve drug pharmacokinetics. Aptamers are attractive and promising biomaterials developed with high affinity and specificity against numerous valuable targets. They could act similar to monoclonal antibodies (mAbs), and offer significant advantages. Combined with aptamers, nanostructures are smart veicles with remarkable properties for drug delivery. Combination of aptamer and nanotechnology has resulted in the production of various targeted drug delivery systems which are highly efficient in therapeutic and diagnostic applications. In this review, some of the efforts related to design and development of aptamer-targeted nanocarriers have been summarized considering: i) Aptamer importance as smart ligands and the aptamer development methods ii) Types of nanostructures combined with aptamers as targeting agent proposed in the literature iii) Cancer specific aptamers evaluated in combination with nanocarriers for diagnostic and therapeutic applications and iv) Discussion of aptamer-based smart nanocarriers according to the trend of related research works. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
36. Challenges to Design and Develop of DNA Aptamers for Protein Targets. I. Optimization of Asymmetric PCR for Generation of a Single Stranded DNA Library.
- Author
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Tabarzad, Maryam, Kazemi, Bahram, Vahidi, Hossein, Aboofazeli, Reza, Shahhosseini, Soraya, and Nafissi-Varcheh, Nastaran
- Subjects
- *
APTAMERS , *SINGLE-stranded DNA , *OLIGONUCLEOTIDES , *POLYMERASE chain reaction , *GEL electrophoresis - Abstract
Aptamers, or single stranded oligonucleotides, are produced by systematic evolution of ligands by exponential enrichment, abbreviated as SELEX. In the amplification and regeneration step of SELEX technique, dsDNA is conversed to ssDNA. Asymmetric PCR is one of the methods used for the generation of ssDNA. The purpose of this study was to design a random DNA library for selection of aptamers with high affinity for protein targets and develop an efficient asymmetric PCR amplification. Thus, the influence of factors including annealing temperature, number of amplification cycles, primer ratio, Mg2+ concentration and the presence of a PCR enhancer on the amplification of the desired product were evaluated. Results obtained by agarose gel electrophoresis showed that the annealing temperature of 64 °C, Mg2+ concentration of 0.25 mM, reverse to forward primer ratio of 15:1, amplification cycle of 25 and the presence L-ectoin as a PCR enhancer with the concentration of 0.4 M were the optimal conditions. Our results supported that the yield of this type of ssDNA production is sufficient for combinatorial screening of aptamers. [ABSTRACT FROM AUTHOR]
- Published
- 2014
37. Exploring QSAR for the Inhibitory Activity of a Large Set of Aromatic/Heterocyclic Sulfonamides toward Four Different Isoenzymes of Carbonic Anhydrase.
- Author
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Hemmateenejad, Bahram, Miri, Ramin, Jafarpour, Mehrnaz, Tabarzad, Maryam, and Shamsipur, Mojtaba
- Published
- 2007
- Full Text
- View/download PDF
38. Molecular modeling and QSAR analysis of the anticonvulsant activity of some N-phenyl-N′-(4-pyridinyl)-urea derivatives
- Author
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Hemmateenejad, Bahram, Miri, Ramin, Tabarzad, Maryam, Jafarpour, Mehrnaz, and Zand, Farzaneh
- Subjects
- *
URINALYSIS , *CLINICAL chemistry , *BIOCHEMISTRY - Abstract
A quantitative structure activity relationship analysis has been applied to a data set of 20 N-phenyl-N′-(4-pyridinyl)-urea derivatives with anticonvulsant activity. Semi-empirical quantum chemical calculations at AM1 level was used to find the optimum 3D geometry of the studied molecules. Four types of molecular descriptors including classical (substituent constants), constitutional, topological and quantum chemical was used to derive a quantitative relationship between the anticonvulsant activity and structural properties. A multi-parametric equation containing three descriptors with good statistical qualities was obtained using multiple linear regression (MLR). In addition, partial least squares (PLS) regression was used to model the structure-activity relationships, more accurately. The results confirmed the superiority of the results obtained by PLS relative to MLR. The respective percent relative errors of prediction for the MLR and PLS regression methods was between (-3.18)–(+3.15) and (-1.28)–(+1.52). [Copyright &y& Elsevier]
- Published
- 2004
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39. Antimicrobial peptides with anticancer activity: Today status, trends and their computational design.
- Author
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Kordi, Masoumeh, Borzouyi, Zeynab, Chitsaz, Saideh, Asmaei, Mohammad hadi, Salami, Robab, and Tabarzad, Maryam
- Subjects
- *
ANTIMICROBIAL peptides , *ANTINEOPLASTIC agents , *PEPTIDES , *INHIBITION of cellular proliferation , *INTERNET servers - Abstract
Some antimicrobial peptides have been shown to be able to inhibit the proliferation of cancer cell lines. Various strategies for treating cancers with active peptides have been pursued. According to the reports, anticancer peptides are important therapeutic peptides, which can act through two distinct pathways: they either just create pores in the cell membrane, or they have a vital intracellular target. In this review, publications up to Sep. 2021 had extracted form Scopus and PubMed using "antimicrobial peptide" and "anticancer peptide" as keywords. In second step, "computational design" related publications extracted. Among publications, those have similar scopes were classified and selected based on mechanisms of action and application. In this review, the most recent advances in the field of antimicrobial peptides with anti-cancer activities have been summarized. Freely available webservers such as AntiCP, ACPP, iACP, iACP-GAEnsC, ACPred are discussed here. In conclusion, despite some limitations of ACPs such as production cost and challenges, short half-life and toxicity on normal cells, the beneficial properties of AMPs make some of them good therapeutic agents for cancer therapy. Towards designing novel ACPs, the computational methods have substantial position and have been used progressively, today. [Display omitted] • Antimicrobial peptides can also have anti-cancer activities named anti-cancer peptides (ACPs). • Pore formation, cell-penetration and tumor targeting are the main mechanisms of ACPs. • The computational methods have substantial position in ACP design. • AntiCP, ACPP, iACP, iACP-GAEnsC, ACPred are some of available webservers for ACP prediction. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
40. Peptide dendrimers as valuable biomaterials in medical sciences.
- Author
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Tabatabaei Mirakabad, Fatemeh Sadat, Khoramgah, Maryam Sadat, Keshavarz F., Kamyar, Tabarzad, Maryam, and Ranjbari, Javad
- Subjects
- *
DENDRIMERS , *BIOMATERIALS , *MEDICAL sciences , *DRUG carriers , *AMINO acids , *DRUGS , *DRUG development - Abstract
Peptides are oligomers of amino acids, which have been used in a wide range of applications, particularly in medical and pharmaceutical sciences. Linear peptides have been extensively developed in various fields of medicine as therapeutics or targeting agents. The branched structure of peptide dendrimers with peptide (commonly, poly l ‑Lysine) or non-peptide (commonly poly‑amidoamine) core, often exhibits valuable novel features, improves stability and enhances the functionality of peptide in comparison with small linear peptides. The potential applications of Branched and hyper-branched peptidic structures which are known as peptide dendrimers in biomedical sciences have been approved vastly. A peptide dendrimer contains three distinct parts including core, building blocks and branching units or surface functional groups. These structures provide a lot of opportunities in the pharmaceutical field, particularly for novel drug development. In this review, a brief summary of different biomedical applications of peptide dendrimers is presented, and peptide dendrimers as active pharmaceutical ingredients and drug delivery carriers are discussed. Applications of peptide dendrimers in vaccines and diagnostic tools are also presented, in brief. Generally, peptide dendrimers are promising biomaterials with high evolution rate for clinical and non-clinical applications in medicine. Unlabelled Image [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
41. Comparing the Soluble Form of Recombinant Human Insulin-like Growth Factor-1 (rhIGF-1) in Escherichia coli Using Thioredoxin as Fused and Co-expressed Protein.
- Author
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Hemmati S, Maghami P, Ranjbari J, and Tabarzad M
- Abstract
Introduction: Insulin-like growth factor-1 (IGF-1) is a single-chain polypeptide with various physiological functions. Escherichia coli is one of the most desirable hosts for recombinant protein production, especially for human proteins whose post-translation modifications are not essential for their bioactivity, such as hIGF-1., Objectives: In this study, bacterial thioredoxin (Trx) was studied as a fused and non-fused protein to convert the insoluble form of recombinant human IGF-1 (rhIGF-1) to its soluble form in E. coli., Methods: The rhIGF-1 was expressed in the E. coli Origami strain in the form of fused-Trx. It was co-expressed with Trx and then purified and quantified. In the next step, the biological activity of rhIGF-1 was evaluated by alkaline phosphatase (ALP) activity assay in human adipose-derived stem cells (hASCs) regarding the differentiation enhancement effect of IGF-1 through the osteogenic process., Results: Results showed that Trx in both the fused and non-fused forms had a positive effect on the production of the soluble form of rhIGF-1. A significant increase in ALP activity in hASCs after rhIGF-1 treatment was observed, confirming protein bioactivity., Conclusion: It was strongly suggested that the overproduction of Trx could increase the solubility of co-expressed recombinant proteins by changing the redox state in E. coli cells., (Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.net.)
- Published
- 2024
- Full Text
- View/download PDF
42. Design and Evaluation of a Novel Anti-microbial Peptide from Cathelicidin-2: Selectively Active Against Acinetobacter baumannii .
- Author
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Fathi F, Ghobeh M, H Shirazi F, and Tabarzad M
- Abstract
Background: Infections caused by pathogenic microorganisms have increased the need for hospital care and have thus represented a public health problem and a significant financial burden. Classical treatments consisting of traditional antibiotics face several challenges today. Anti-microbial peptides (AMPs) are a conserved characteristic of the innate immune response among different animal species to defend against pathogenic microorganisms., Objectives: In this study, a new peptide sequence (mCHTL131-140) was designed using the in silico approach., Methods: Cathelicidin-2 (UniprotID: Q2IAL7) was used as a potential antimicrobial protein, and a novel 10 - 12 amino acids sequence AMP was designed using bioinformatics tools and the AMP databases. Then, the anti-bacterial, anti-biofilm, and anti-fungal properties of the peptide, as well as its hemolytic activity and cytotoxicity towards human fibroblast (HDF) cells, were investigated in vitro., Results: Online bioinformatics tools indicated that the peptide sequence could have anti-bacterial, anti-viral, anti-fungal, and anti-biofilm properties with little hemolytic properties. The experimental tests confirmed that mCHTL131-140 exhibited the best anti-bacterial properties against Acinetobacter baumannii and had fair anti-fungal properties. Besides, it did not cause red blood cell lysis and showed no cytotoxicity towards HDF cells., Conclusions: In general, the designed peptide can be considered a promising AMP to control hospital-acquired infections by A. baumannii ., Competing Interests: The authors declare that there is no conflict of interest., (Copyright © 2023, Fathi et al.)
- Published
- 2023
- Full Text
- View/download PDF
43. The Analgesic and Anti-inflammatory Effects of Partially Purified Polysaccharide Fractions of Cell-free Medium and Biomass of Spirulina platensis PCST5.
- Author
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Dehghanizadeh Baghdadabad M, Naderi N, Atabaki V, Faramarzi MA, Tabarzad M, and Hosseinabadi T
- Abstract
Background: Spirulina is a cyanobacteria species containing various bioactive compounds. Spirulina is a known source of nutrients in some traditional diets. Different activities have been reported for various extracts of S. platensis ., Objectives: In this study, the polysaccharide content of culture media and biomass extract of one species of Spirulina was partially purified, and its analgesic and anti-inflammatory effects were evaluated., Methods: Spirulina platensis PCST5 was cultured in a sterile Zarouk medium at 27°C and 16/8h of light/ dark exposure cycle for 25 days. Then, the polysaccharide content of biomass and cell-free culture medium samples (BPSs and CFPSs, respectively) was partially purified. The analgesic and anti-inflammatory effects were evaluated using animal models., Results: 16S rRNA gene analysis confirmed that the organism was genetically similar to Spirulina platensis . The CFPSs (30 and 100 mg/kg) and BPSs (30 mg/kg) significantly reduced pain-related behaviors in rats. Similarly, all samples could significantly reduce carrageenan-induced paw inflammation volume compared with the control group. Our results suggest Spirulina 's polysaccharide fractions (CFPSs and BPSs) had significant analgesic and anti-inflammatory effects., Conclusions: Since Spirulina is a readily available source of bioactive compounds, finding such potent anti-inflammatory and anti-nociceptive compounds can provide promising leads for novel drug development., Competing Interests: The Authors declared that they had no conflict of interest., (Copyright © 2023, Dehghanizadeh Baghdadabad et al.)
- Published
- 2023
- Full Text
- View/download PDF
44. Isolation of the Anticoagulant and Procoagulant Fractions of the Venom of Iranian Endemic Echis carinatus .
- Author
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Nasri Nasrabadi N, Mohammadpour Dounighi N, Ahmadinejad M, Rabiei H, Tabarzad M, Najafi M, and Vatanpour H
- Abstract
Background: The venom of Echis carinatus contains both procoagulant and anticoagulant components that can either promote or block the blood coagulation cascade, and some of these components affect platelet function in different ways., Objectives: The present study focuses on setting up a procedure for the purification of crude venom and designing appropriate clotting tests in order to characterize the procoagulant and anticoagulant fractions of E. carinatus venom., Methods: Chromatographic methods, including gel filtration, ion-exchange chromatography, and reverse-phase high-performance liquid chromatography (HPLC), were applied for purifying these fractions. Coagulant activity testing, prothrombin time (PT), and activated partial thromboplastin time (APTT) were used to determine procoagulant and anticoagulant properties. For measuring molecular weight, 15% SDS-PAGE electrophoresis with a molecular weight standard ranging from 6.5 to 200 kDa was used., Results: We obtained five fractions named F
1 , F2 , F3 , F4 , and F5 . The F1 and F2 fractions showed procoagulant activity, and the F5 fraction had anticoagulant activity. The molecular weight of F2.4.2 from fraction F2 and F5.1 from fraction F5 were analyzed by SDS-PAGE electrophoresis under the reducing condition. These factors were identified as a single protein band at the end of purification. The molecular weights of these purified fractions were estimated to be 7.5 kDa and 38 kDa for F5.1(b) and F2.4.2(b) , respectively., Conclusions: Our findings suggest an efficient and suitable procedure for the identification and purification of the procoagulant and anticoagulant factors of the venom of Iranian E. carinatus using the PT and APTT assays., Competing Interests: Conflict of Interests: The authors declare no conflict of interest. This work was financially supported by the NIMAD organization., (Copyright © 2022, Author(s).)- Published
- 2022
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- View/download PDF
45. A Study on the Effect of Nitrate and Phosphate Concentrations on the Production of Mycosporine-Like Amino Acids by Chlorella Vulgaris .
- Author
-
Hosseinabadi T, Gharib R, Salehian S, and Tabarzad M
- Abstract
Background: Cyanobacteria can produce compounds absorbing ultraviolet irradiation. Mycosporine like amino acids (MAAs) are some of these important metabolites, which can be potentially considered as a sunscreen agent in the pharmaceutical and cosmetic industry. Different factors have been reported that can affect the biosynthesis of MAA., Objective: In this study, the influence of different concentrations of phosphate and nitrate under different environmental conditions on MAA production by Chlorella vulgaris was investigated using an experimental design method, in order to enhance MAAs production in this specious., Materials and Methods: A 2
3 full factorial design (FFD) using Design-Expert v7.0.0 software was used to optimize simultaneously all the three factors of nitrate and phosphate concentration and condition of incubation environment on the MAA production by this species of C. vulgaris . Two milliliter of organism stock were grown in 200 mL BG11 medium and after 21 days, the biomasses of all samples were separated. Then, the MAA was extracted from dried biomass using methanol extraction. The extracts were analyzed by reverse-phase high performance liquid chromatography (RP-HPLC). After complete analysis, four samples were then cultured at the optimized conditions and analyzed by liquid chromatohraphy coupled to mass spectrometry (LC/MS)., Results: The results showed that this microalga could produce compounds with λmax of 330 nm and a retention time of about 2 min. According to the central composite analysis, phosphate at 0.51 g.L-1 and nitrate at 2.5 g.L-1 can be considered as the optimum concentrations, resulting to the preferable conditions concerning the culture in germinator. Based on LC/MSS analysis, the major compound had a m/z of 332 at the optimum condition., Conclusion: Thus, this species is expected to have the capability of MAA production (maybe Shinorine) or one of its glycosylated derivatives., (Copyright: © 2021 The Author(s); Published by Iranian Journal of Biotechnology.)- Published
- 2022
- Full Text
- View/download PDF
46. Primary Assessment of Mycosporine-Like Amino Acids Production by Two Species of Fischerella sp.
- Author
-
Tabarzad M, Baktash S, Atabaki V, and Hosseinabadi T
- Abstract
Mycosporin-like amino acids (MAAs) are a group of UV-absorbing compounds, which can be produced by various organisms such as algae and cyanobacteria, particularly if they survive in highly irradiated environments. In this study, the production of MAAs by two species of Fischerlla sp. (F5 and F14), isolated from the North of Iran, was investigated. Both species, which had previously been morphologically detected as Fisherella sp., were confirmed molecularly by sequencing the PCR amplicon of the 16S rRNA gene. The species were cultured in sterilized BG.11 medium for 21 days, then biomasses were separated, and their MAAs content was extracted by methanol and partially purified using chloroform liquid-liquid extraction. The extract was analyzed using high-performance liquid chromatography (HPLC) and liquid chromatography-mass spectroscopy (LC-MS). In both species, the compounds with MAAs characteristics were observed. They had maximum absorbance (λ
max ) in the range of 300-400 nm, which was confirmed by the LC-MS analysis. In F5 species, the peaks with m/z 340 and 391 and in another one (F14), a peak with m/z 333.2 were recorded, that the latter might be Shinorine. In general, further analysis should be performed to elucidate the exact structural aspects of these compounds. In conclusion, both Fischerella sp. studied here were capable of producing MAAs and can be evaluated for use in sunscreen pharmaceutical and cosmetic products., Competing Interests: The authors declare that there are no conflicts of interest.- Published
- 2021
- Full Text
- View/download PDF
47. Biomedical and Pharmaceutical-Related Applications of Laccases.
- Author
-
Mohit E, Tabarzad M, and Faramarzi MA
- Subjects
- Bandages, Biocatalysis, Biosensing Techniques methods, Catheters, Chitosan chemistry, Chitosan metabolism, Fungal Proteins metabolism, Halogenation, Humans, Laccase metabolism, Lignin chemistry, Lignin metabolism, Oxidation-Reduction, Phenols chemistry, Phenols metabolism, Anti-Infective Agents chemistry, Antineoplastic Agents chemistry, Antioxidants chemistry, Biotechnology methods, Fungal Proteins chemistry, Laccase chemistry
- Abstract
The oxidation of a vast range of phenolic and non-phenolic substrates has been catalyzed by laccases. Given a wide range of substrates, laccases can be applied in different biotechnological applications. The present review was conducted to provide a broad context in pharmaceutical- and biomedical- related applications of laccases for academic and industrial researchers. First, an overview of biological roles of laccases was presented. Furthermore, laccase-mediated strategies for imparting antimicrobial and antioxidant properties to different surfaces were discussed. In this review, laccase-mediated mechanisms for endowing antimicrobial properties were divided into laccase-mediated bio-grafting of phenolic compounds on lignocellulosic fiber, chitosan and catheters, and laccase-catalyzed iodination. Accordingly, a special emphasis was placed on laccase-mediated functionalization for creating antimicrobials, particularly chitosan-based wound dressings. Additionally, oxidative bio-grafting and oxidative polymerization were described as the two main laccase-catalyzed reactions for imparting antioxidant properties. Recent laccase-related studies were also summarized regarding the synthesis of antibacterial and antiproliferative agents and the degradation of pharmaceuticals and personal care products., (Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.net.)
- Published
- 2020
- Full Text
- View/download PDF
48. Effect of Amino Acid Substitutions on Biological Activity of Antimicrobial Peptide: Design, Recombinant Production, and Biological Activity.
- Author
-
Panahi Chegini P, Nikokar I, Tabarzad M, Faezi S, and Mahboubi A
- Abstract
Recently, antimicrobial peptides have been introduced as potent antibiotics with a wide range of antimicrobial activities. They have also exhibited other biological activities, including anti-inflammatory, growth stimulating, and anti-cancer activities. In this study, an analog of Magainin II was designed and produced as a recombinant fusion protein. The designed sequence contained 24 amino acid residues (P24), in which Lys, His, Ser residues were substituted with Arg and also, hydrophobic Phe was replaced with Trp. Recombinant production of P24 in Escherichia coli (E. coli) BL21 using pTYB21, containing chitin binding domain and intein sequence at the N-terminus of the peptide gene, resulted in 1 μg mL
-1 product from culture. Chitin column chromatography, followed by online peptide cleavage with thiol reducing agent was applied to purify the peptide. Antimicrobial activity was evaluated using five bacteria strains including Staphylococcus aureus, Enterococcus faecalis, Klebsiella pneumonia, E. coli, and Pseudomonas aeruginosa . Designed AMP exhibited promising antimicrobial activities with low minimum inhibitory concentration, in the range of 64-256 µg/mL. P24 showed potent antimicrobial activity preferably against Gram-positive bacteria, and more potent than pexiganan as a successful Magainin II analog for topical infections. In general, further modification can be applied to improve its therapeutic index.- Published
- 2019
- Full Text
- View/download PDF
49. Construction of a Mammalian IRES-based Expression Vector to Amplify a Bispecific Antibody; Blinatumomab.
- Author
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Naddafi F, Davami F, Tabarzad M, Barkhordari F, and Shirazi FH
- Abstract
Blinatumomab, the bispecific T cell engager antibody (BsAb), has been demonstrated as the most successful BsAb to date. Throughout the past decade, vector design has great importance for the expression of monoclonal antibody in Chinese hamster ovary (CHO) cells. It has been indicated that expression vectors based on the elongation factor-1 alpha (EF-1 alpha) gene and DHFR selection marker can be highly effective to produce populations of stably transfected cells in the selection medium. Moreover, the phiC31 integrase system is considered as an attractive and safe protein expression system in mammalian cells and it could integrate a donor plasmid of any size, as a single copy, in to the host genome with no cofactors. In this study, phiC31 integrase technology in combination with DHFR amplification system was used to have an expression vector for future expression of blinatumomab in CHO cells. The gene of interest (BsAb gene) could be joined to DHFR selection marker with the insertion of an internal ribosome entry site (IRES). By positioning the DHFR downstream of BsAb gene and IRES, the transcription of the selection marker can depend on the successful transcription of the BsAb gene, which was located upstream in the expression construct. In this study, FC550A-1 vector was used as the backbone and DHFR selection marker was successfully combined with phiC31 integrase technology to generate a high-expressing construct for BsAb expression in CHO-DG44 cells in future studies.
- Published
- 2019
- Full Text
- View/download PDF
50. Anti-Cancer Drug Delivery Using Carbohydrate-Based Polymers.
- Author
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Ranjbari J, Mokhtarzadeh A, Alibakhshi A, Tabarzad M, Hejazi M, and Ramezani M
- Subjects
- Animals, Antineoplastic Agents chemistry, Cell Proliferation drug effects, Drug Carriers chemistry, Humans, Polymers chemistry, Polysaccharides chemistry, Antineoplastic Agents pharmacology, Drug Delivery Systems, Neoplasms drug therapy, Polymers pharmacology, Polysaccharides pharmacology
- Abstract
Polymeric drug delivery systems in the form of nanocarriers are the most interesting vehicles in anticancer therapy. Among different types of biocompatible polymers, carbohydrate-based polymers or polysaccharides are the most common natural polymers with complex structures consisting of long chains of monosaccharide or disaccharide units bound by glycosidic linkages. Their appealing properties such as availability, biocompatibility, biodegradability, low toxicity, high chemical reactivity, facile chemical modification and low cost led to their extensive applications in biomedical and pharmaceutical fields including development of nano-vehicles for delivery of anti-cancer therapeutic agents. Generally, reducing systemic toxicity, increasing short half-lives and tumor localization of agents are the top priorities for a successful cancer therapy. Polysaccharide-based or - coated nanosystems with respect to their advantageous features as well as accumulation in tumor tissue due to enhanced permeation and retention (EPR) effect can provide promising carrier systems for the delivery of noblest impressive agents. Most challenging factor in cancer therapy was the toxicity of anti-cancer therapeutic agents for normal cells and therefore, targeted delivery of these drugs to the site of action can be considered as an interesting therapeutic strategy. In this regard, several polysaccharides exhibited selective affinity for specific cell types, and so they can act as a targeting agent in drug delivery systems. Accordingly, different aspects of polysaccharide applications in cancer treatment or diagnosis were reviewed in this paper. In this regard, after a brief introduction of polysaccharide structure and its importance, the pharmaceutical usage of carbohydrate-based polymers was considered according to the identity of accompanying active pharmaceutical agents. It was also presented that the carbohydrate based polymers have been extensively considered as promising materials in the design of efficient nanocarriers for anti-cancer biopharmaceuticals including peptide and proteins or nucleic acid-based therapeutics. Then, the importance of various polysaccharide co-polymers in the drug delivery approaches was illustrated., (Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.)
- Published
- 2018
- Full Text
- View/download PDF
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