1. Functional characterization, structural basis, and protein engineering of a rare flavonoid 2′-O-glycosyltransferase from Scutellaria baicalensis.
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Wang, Zilong, Du, Xueqing, Ye, Guo, Wang, Haotian, Liu, Yizhan, Liu, Chenrui, Li, Fudong, Ågren, Hans, Zhou, Yang, Li, Junhao, He, Chao, Guo, De-An, and Ye, Min
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CYCLOOXYGENASE 2 ,PROTEIN engineering ,CHINESE skullcap ,FLAVONOIDS ,SECONDARY metabolism - Abstract
Glycosylation is an important post-modification reaction in plant secondary metabolism, and contributes to structural diversity of bioactive natural products. In plants, glycosylation is usually catalyzed by UDP-glycosyltransferases. Flavonoid 2′- O -glycosides are rare glycosides. However, no UGTs have been reported, thus far, to specifically catalyze 2′- O -glycosylation of flavonoids. In this work, UGT71AP2 was identified from the medicinal plant Scutellaria baicalensis as the first flavonoid 2′- O -glycosyltransferase. It could preferentially transfer a glycosyl moiety to 2′-hydroxy of at least nine flavonoids to yield six new compounds. Some of the 2′- O -glycosides showed noticeable inhibitory activities against cyclooxygenase 2. The crystal structure of UGT71AP2 (2.15 Å) was solved, and mechanisms of its regio-selectivity was interpreted by p K a calculations, molecular docking, MD simulation, MM/GBSA binding free energy, QM/MM, and hydrogen‒deuterium exchange mass spectrometry analysis. Through structure-guided rational design, we obtained the L138T/V179D/M180T mutant with remarkably enhanced regio-selectivity (the ratio of 7- O -glycosylation byproducts decreased from 48% to 4%) and catalytic efficiency of 2′- O -glycosylation (k cat / K m , 0.23 L/(s·μmol), 12-fold higher than the native). Moreover, UGT71AP2 also possesses moderate UDP-dependent de-glycosylation activity, and is a dual function glycosyltransferase. This work provides an efficient biocatalyst and sets a good example for protein engineering to optimize enzyme catalytic features through rational design. This work reports a novel 2′- O -glycosyltransferase, unravels its regio-selectivity mechanism, and improves its catalytic function through protein engineering. [Display omitted] [ABSTRACT FROM AUTHOR]
- Published
- 2024
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