192 results on '"Wünsch-Filho, V."'
Search Results
2. The role of oral hygiene in head and neck cancer: results from International Head and Neck Cancer Epidemiology (INHANCE) consortium
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Hashim, D., Sartori, S., Brennan, P., Curado, M.P., Wünsch-Filho, V., Divaris, K., Olshan, A.F., Zevallos, J.P., Winn, D.M., Franceschi, S., Castellsagué, X., Lissowska, J., Rudnai, P., Matsuo, K., Morgenstern, H., Chen, C., Vaughan, T.L., Hofmann, J.N., D'Souza, G., Haddad, R.I., Wu, H., Lee, Y.-C., Hashibe, M., Vecchia, C.La, and Boffetta, P.
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- 2016
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3. How much do smoking and alcohol consumption explain socioeconomic inequalities in head and neck cancer risk?
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Head and Neck Genome Project/GENCAPO, Boing, A F, Antunes, J L Ferreira, de Carvalho, M Brasilino, de Góis Filho, J Francisco, Kowalski, L P, Michaluart, P, Eluf-Neto, J, Boffetta, P, and Wünsch-Filho, V
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- 2011
4. Alcohol and tobacco, and the risk of cancers of the upper aerodigestive tract in Latin America: a case-control study
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Szymańska, K., Hung, R. J., Wünsch-Filho, V., Eluf-Neto, J., Curado, M. P., Koifman, S., Matos, E., Menezes, A., Fernandez, L., Daudt, A. W., Boffetta, P., and Brennan, P.
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- 2011
5. Drinking of maté and the risk of cancers of the upper aerodigestive tract in Latin America: a case—control study
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Szymańska, K., Matos, E., Hung, R. J., Wünsch-Filho, V., Eluf-Neto, J., Menezes, A., Daudt, A. W., Brennan, P., and Boffetta, P.
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- 2010
6. How much do smoking and alcohol consumption explain socioeconomic inequalities in head and neck cancer risk?
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Boing, A F, Antunes, J L Ferreira, de Carvalho, M Brasilino, de Góis Filho, J Francisco, Kowalski, L P, Michaluart, P, Jr, Eluf-Neto, J, Boffetta, P, and Wünsch-Filho, V
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- 2011
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7. TP53 and EGFR mutations in combination with lifestyle risk factors in tumours of the upper aerodigestive tract from South America
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Szymańska, K., Levi, J.E., Menezes, A., Wünsch-Filho, V., Eluf-Neto, J., Koifman, S., Matos, E., Daudt, A.W., Curado, M.P., Villar, S., Pawlita, M., Waterboer, T., Boffetta, P., Hainaut, P., and Brennan, P.
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- 2010
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8. Annexin A1 subcellular expression in laryngeal squamous cell carcinoma
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Alves, V A F, Nonogaki, S, Cury, P M, Wünsch-Filho, V, de Carvalho, M B, Michaluart-Júnior, P, Moyses, R A, Curioni, O A, Figueiredo, D L A, Scapulatempo-Neto, C, Parra, E R, Polachini, G M, Silistino-Souza, R, Oliani, S M, Silva-Júnior, W A, Nobrega, F G, Tajara, E H, and Zago, M A
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- 2008
9. Mendelian Randomization and mediation analysis of leukocyte telomere length and risk of lung and head and neck cancers
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Kachuri, L. Saarela, O. Bojesen, S.E. Davey Smith, G. Liu, G. Landi, M.T. Caporaso, N.E. Christiani, D.C. Johansson, M. Panico, S. Overvad, K. Trichopoulou, A. Vineis, P. Scelo, G. Zaridze, D. Wu, X. Albanes, D. Diergaarde, B. Lagiou, P. Macfarlane, G.J. Aldrich, M.C. Tardón, A. Rennert, G. Olshan, A.F. Weissler, M.C. Chen, C. Goodman, G.E. Doherty, J.A. Ness, A.R. Bickeböller, H. Wichmann, H.-E. Risch, A. Field, J.K. Teare, M.D. Kiemeney, L.A. Van Der Heijden, E.H.F.M. Carroll, J.C. Haugen, A. Zienolddiny, S. Skaug, V. Wünsch-Filho, V. Tajara, E.H. Ayoub Moysés, R. Daumas Nunes, F. Lam, S. Eluf-Neto, J. Lacko, M. Peters, W.H.M. Le Marchand, L. Duell, E.J. Andrew, A.S. Franceschi, S. Schabath, M.B. Manjer, J. Arnold, S. Lazarus, P. Mukeriya, A. Swiatkowska, B. Janout, V. Holcatova, I. Stojsic, J. Mates, D. Lissowska, J. Boccia, S. Lesseur, C. Zong, X. McKay, J.D. Brennan, P. Amos, C.I. Hung, R.J.
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Background: Evidence from observational studies of telomere length (TL) has been conflicting regarding its direction of association with cancer risk. We investigated the causal relevance of TL for lung and head and neck cancers using Mendelian Randomization (MR) and mediation analyses. Methods: We developed a novel genetic instrument for TL in chromosome 5p15.33, using variants identified through deep-sequencing, that were genotyped in 2051 cancer-free subjects. Next, we conducted an MR analysis of lung (16 396 cases, 13 013 controls) and head and neck cancer (4415 cases, 5013 controls) using eight genetic instruments for TL. Lastly, the 5p15.33 instrument and distinct 5p15.33 lung cancer risk loci were evaluated using two-sample mediation analysis, to quantify their direct and indirect, telomere-mediated, effects. Results: The multi-allelic 5p15.33 instrument explained 1.49-2.00% of TL variation in our data (p = 2.6 × 10-9). The MR analysis estimated that a 1000 base-pair increase in TL increases risk of lung cancer [odds ratio (OR) = 1.41, 95% confidence interval (CI): 1.20-1.65] and lung adenocarcinoma (OR = 1.92, 95% CI: 1.51-2.22), but not squamous lung carcinoma (OR = 1.04, 95% CI: 0.83-1.29) or head and neck cancers (OR = 0.90, 95% CI: 0.70-1.05). Mediation analysis of the 5p15.33 instrument indicated an absence of direct effects on lung cancer risk (OR = 1.00, 95% CI: 0.95-1.04). Analysis of distinct 5p15.33 susceptibility variants estimated that TL mediates up to 40% of the observed associations with lung cancer risk. Conclusions: Our findings support a causal role for long telomeres in lung cancer aetiology, particularly for adenocarcinoma, and demonstrate that telomere maintenance partially mediates the lung cancer susceptibility conferred by 5p15.33 loci. © 2018 The Author(s) 2018; all rights reserved. Published by Oxford University Press on behalf of the International Epidemiological Association.
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- 2019
10. Living on a farm, contact with farm animals and pets, and childhood acute lymphoblastic leukemia: pooled and meta-analyses from the Childhood Leukemia International Consortium
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Orsi, L. Magnani, C. Petridou, E.T. Dockerty, J.D. Metayer, C. Milne, E. Bailey, H.D. Dessypris, N. Kang, A.Y. Wesseling, C. Infante-Rivard, C. Wünsch-Filho, V. Mora, A.M. Spector, L.G. Clavel, J.
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The associations between childhood acute lymphoblastic leukemia (ALL) and several factors related to early stimulation of the immune system, that is, farm residence and regular contacts with farm animals (livestock, poultry) or pets in early childhood, were investigated using data from 13 case–control studies participating in the Childhood Leukemia International Consortium. The sample included 7847 ALL cases and 11,667 controls aged 1–14 years. In all studies, the data were obtained from case and control parents using standardized questionnaires. Pooled odds ratios (ORs) and 95% confidence intervals (CIs) were estimated by unconditional logistic regression adjusted for age, sex, study, maternal education, and maternal age. Contact with livestock in the first year of life was inversely associated with ALL (OR = 0.65, 95% CI: 0.50, 0.85). Inverse associations were also observed for contact with dogs (OR = 0.92, 95% CI: 0.86, 0.99) and cats (OR = 0.87, 95% CI: 0.80, 0.94) in the first year of life. There was no evidence of a significant association with farm residence in the first year of life. The findings of these large pooled and meta-analyses add additional evidence to the hypothesis that regular contact with animals in early childhood is inversely associated with childhood ALL occurrence which is consistent with Greaves’ delayed infection hypothesis. © 2018 The Authors. Cancer Medicine published by John Wiley & Sons Ltd.
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- 2018
11. Alcohol and cigarette consumption predict mortality in patients with head and neck cancer: A pooled analysis within the International Head and Neck Cancer Epidemiology (INHANCE) Consortium
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Giraldi, Luca, Leoncini, Emanuele, Pastorino, Roberta, Wünsch-Filho, V., de Carvalho, M., Lopez, R., Cadoni, Gabriella, Arzani, Dario, Petrelli, Livia, Matsuo, K., Bosetti, C., La Vecchia, Carlo Vitantonio, Garavello, W., Polesel, J., Serraino, D., Simonato, L., Canova, C., Richiardi, L., Boffetta, Paolo, Hashibe, M., Lee, Y. C. A., Boccia, Stefania, Giraldi, L., Leoncini, E., Pastorino, Roberta (ORCID:0000-0001-5013-0733), Cadoni, G. (ORCID:0000-0001-8244-784X), Arzani, D., Petrelli, L., Boffetta, P., Boccia, S. (ORCID:0000-0002-1864-749X), Giraldi, Luca, Leoncini, Emanuele, Pastorino, Roberta, Wünsch-Filho, V., de Carvalho, M., Lopez, R., Cadoni, Gabriella, Arzani, Dario, Petrelli, Livia, Matsuo, K., Bosetti, C., La Vecchia, Carlo Vitantonio, Garavello, W., Polesel, J., Serraino, D., Simonato, L., Canova, C., Richiardi, L., Boffetta, Paolo, Hashibe, M., Lee, Y. C. A., Boccia, Stefania, Giraldi, L., Leoncini, E., Pastorino, Roberta (ORCID:0000-0001-5013-0733), Cadoni, G. (ORCID:0000-0001-8244-784X), Arzani, D., Petrelli, L., Boffetta, P., and Boccia, S. (ORCID:0000-0002-1864-749X)
- Abstract
Background: This study evaluated whether demographics, pre-diagnosis lifestyle habits and clinical data are associated with the overall survival (OS) and head and neck cancer (HNC)-specific survival in patients with HNC. Patients and methods: We conducted a pooled analysis, including 4759 HNC patients from five studies within the International Head and Neck Cancer Epidemiology (INHANCE) Consortium. Cox proportional hazard ratios (HRs) and the corresponding 95% confidence intervals (CIs) were estimated including terms reported significantly associated with the survival in the univariate analysis. Results: Five-year OS was 51.4% for all HNC sites combined: 50.3% for oral cavity, 41.1% for oropharynx, 35.0% for hypopharynx and 63.9% for larynx. When we considered HNC-specific survival, 5-year survival rates were 57.4% for all HNC combined: 54.6% for oral cavity, 45.4% for oropharynx, 37.1% for hypopharynx and 72.3% for larynx. Older ages at diagnosis and advanced tumour staging were unfavourable predictors of OS and HNC-specific survival. In laryngeal cancer, low educational level was an unfavourable prognostic factor for OS (HR=2.54, 95% CI 1.01-6.38, for high school or lower versus college graduate), and status and intensity of alcohol drinking were prognostic factors both of the OS (current drinkers HR=1.73, 95% CI 1.16-2.58) and HNC-specific survival (current drinkers HR=2.11, 95% CI 1.22-3.66). In oropharyngeal cancer, smoking status was an independent prognostic factors for OS. Smoking intensity ( > 20 cigarettes/day HR=1.41, 95% CI 1.03-1.92) was also an independent prognostic factor for OS in patients with cancer of the oral cavity. Conclusions: OS and HNC-specific survival differ among HNC sites. Pre-diagnosis cigarette smoking is a prognostic factor of the OS for patients with cancer of the oral cavity and oropharynx, whereas pre-diagnosis alcohol drinking is a prognostic factor of OS and HNC-specific survival for patients with cancer of the larynx. Low ed
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- 2017
12. Genome-wide association analyses identify new susceptibility loci for oral cavity and pharyngeal cancer
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Lesseur, C. Diergaarde, B. Olshan, A.F. Wünsch-Filho, V. Ness, A.R. Liu, G. Lacko, M. Eluf-Neto, J. Franceschi, S. Lagiou, P. Macfarlane, G.J. Richiardi, L. Boccia, S. Polesel, J. Kjaerheim, K. Zaridze, D. Johansson, M. Menezes, A.M. Curado, M.P. Robinson, M. Ahrens, W. Canova, C. Znaor, A. Castellsagué, X. Conway, D.I. Holcátová, I. Mates, D. Vilensky, M. Healy, C.M. Szeszenia-Dabrowska, N. Fabiánová, E. Lissowska, J. Grandis, J.R. Weissler, M.C. Tajara, E.H. Nunes, F.D. De Carvalho, M.B. Thomas, S. Hung, R.J. Peters, W.H.M. Herrero, R. Cadoni, G. Bueno-De-Mesquita, H.B. Steffen, A. Agudo, A. Shangina, O. Xiao, X. Gaborieau, V. Chabrier, A. Anantharaman, D. Boffetta, P. Amos, C.I. McKay, J.D. Brennan, P.
- Abstract
We conducted a genome-wide association study of oral cavity and pharyngeal cancer in 6,034 cases and 6,585 controls from Europe, North America and South America. We detected eight significantly associated loci (P < 5 × 10 â'8), seven of which are new for these cancer sites. Oral and pharyngeal cancers combined were associated with loci at 6p21.32 (rs3828805, HLA-DQB1), 10q26.13 (rs201982221, LHPP) and 11p15.4 (rs1453414, OR52N2-TRIM5). Oral cancer was associated with two new regions, 2p23.3 (rs6547741, GPN1) and 9q34.12 (rs928674, LAMC3), and with known cancer-related loci - 9p21.3 (rs8181047, CDKN2B-AS1) and 5p15.33 (rs10462706, CLPTM1L). Oropharyngeal cancer associations were limited to the human leukocyte antigen (HLA) region, and classical HLA allele imputation showed a protective association with the class II haplotype HLA-DRB1∗1301-HLA-DQA1∗0103-HLA-DQB1∗0603 (odds ratio (OR) = 0.59, P = 2.7 × 10-9). Stratified analyses on a subgroup of oropharyngeal cases with information available on human papillomavirus (HPV) status indicated that this association was considerably stronger in HPV-positive (OR = 0.23, P = 1.6 × 10-6) than in HPV-negative (OR = 0.75, P = 0.16) cancers. © 2016 Nature America, Inc. part of Springer Nature, All Rights reserved.
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- 2016
13. Genome-wide association analyses identify new susceptibility loci for oral cavity and pharyngeal cancer.
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Lesseur, C, Diergaarde, B, Olshan, Af, Wünsch Filho, V, Ness, Ar, Liu, Guopeng, Lacko, M, Eluf Neto, J, Franceschi, S, Lagiou, P, Macfarlane, Gj, Richiardi, L, Boccia, Stefania, Polesel, J, Kjaerheim, K, Zaridze, D, Johansson, M, Menezes, Am, Curado, Mp, Robinson, M, Ahrens, W, Canova, C, Znaor, A, Castellsagué, X, Conway, Di, Holcátová, I, Mates, D, Vilensky, M, Healy, Cm, Szeszenia Dąbrowska, N, Fabiánová, E, Lissowska, J, Grandis, Jr, Weissler, Mc, Tajara, Eh, Nunes, Fd, de Carvalho, Mb, Thomas, S, Hung, Rj, Peters, Wh, Herrero, R, Cadoni, Gabriella, Bueno de Mesquita, Hb, Steffen, A, Agudo, A, Shangina, O, Xiao, X, Gaborieau, V, Chabrier, A, Anantharaman, D, Boffetta, Paolo, Amos, Ci, Mckay, Jd, Brennan, P. 1., Boccia, Stefania (ORCID:0000-0002-1864-749X), Cadoni, Gabriella (ORCID:0000-0001-8244-784X), Lesseur, C, Diergaarde, B, Olshan, Af, Wünsch Filho, V, Ness, Ar, Liu, Guopeng, Lacko, M, Eluf Neto, J, Franceschi, S, Lagiou, P, Macfarlane, Gj, Richiardi, L, Boccia, Stefania, Polesel, J, Kjaerheim, K, Zaridze, D, Johansson, M, Menezes, Am, Curado, Mp, Robinson, M, Ahrens, W, Canova, C, Znaor, A, Castellsagué, X, Conway, Di, Holcátová, I, Mates, D, Vilensky, M, Healy, Cm, Szeszenia Dąbrowska, N, Fabiánová, E, Lissowska, J, Grandis, Jr, Weissler, Mc, Tajara, Eh, Nunes, Fd, de Carvalho, Mb, Thomas, S, Hung, Rj, Peters, Wh, Herrero, R, Cadoni, Gabriella, Bueno de Mesquita, Hb, Steffen, A, Agudo, A, Shangina, O, Xiao, X, Gaborieau, V, Chabrier, A, Anantharaman, D, Boffetta, Paolo, Amos, Ci, Mckay, Jd, Brennan, P. 1., Boccia, Stefania (ORCID:0000-0002-1864-749X), and Cadoni, Gabriella (ORCID:0000-0001-8244-784X)
- Abstract
We conducted a genome-wide association study of oral cavity and pharyngeal cancer in 6,034 cases and 6,585 controls from Europe, North America and South America. We detected eight significantly associated loci (P < 5 × 10−8), seven of which are new for these cancer sites. Oral and pharyngeal cancers combined were associated with loci at 6p21.32 (rs3828805, HLA-DQB1), 10q26.13 (rs201982221, LHPP) and 11p15.4 (rs1453414, OR52N2–TRIM5). Oral cancer was associated with two new regions, 2p23.3 (rs6547741, GPN1) and 9q34.12 (rs928674, LAMC3), and with known cancer-related loci—9p21.3 (rs8181047, CDKN2B-AS1) and 5p15.33 (rs10462706, CLPTM1L). Oropharyngeal cancer associations were limited to the human leukocyte antigen (HLA) region, and classical HLA allele imputation showed a protective association with the class II haplotype HLA-DRB1*1301–HLA-DQA1*0103–HLA-DQB1*0603 (odds ratio (OR) = 0.59, P = 2.7 × 10−9). Stratified analyses on a subgroup of oropharyngeal cases with information available on human papillomavirus (HPV) status indicated that this association was considerably stronger in HPV-positive (OR = 0.23, P = 1.6 × 10−6) than in HPV-negative (OR = 0.75, P = 0.16) cancers.
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- 2016
14. Low frequency of cigarette smoking and the risk of head and neck cancer in the INHANCE consortium pooled analysis.
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Berthiller, J, Straif, K, Agudo, A, Ahrens, W, Bezerra Dos Santos, A, Boccia, Stefania, Cadoni, Gabriella, Canova, Chiara, Castellsague, X, Chen, Chen, Conway, D, Curado, Mp, Dal Maso, L, Daudt, Aw, Fabianova, E, Fernandez, L, Franceschi, S, Fukuyama, Ee, Hayes, Rb, Healy, C, Herrero, R, Holcatova, I, Kelsey, K, Kjaerheim, K, Koifman, S, Lagiou, P, La Vecchia, C, Lazarus, P, Levi, F, Lissowska, J, Macfarlane, T, Mates, D, Mcclean, M, Menezes, A, Merletti, F, Morgenstern, H, Muscat, J, Olshan, Af, Purdue, M, Ramroth, H, Rudnai, P, Schwartz, Sm, Serraino, D, Shangina, O, Smith, E, Sturgis, Em, Szeszenia Dabrowska, N, Thomson, P, Vaughan, Tl, Vilensky, M, Wei, Q, Winn, Dm, Wünsch Filho, V, Zhang, Zf, Znaor, A, Ferro, Giorgia, Brennan, P, Boffetta, Paolo, Hashibe, M, Lee, Yc50, Boccia, Stefania (ORCID:0000-0002-1864-749X), Cadoni, Gabriella (ORCID:0000-0001-8244-784X), Berthiller, J, Straif, K, Agudo, A, Ahrens, W, Bezerra Dos Santos, A, Boccia, Stefania, Cadoni, Gabriella, Canova, Chiara, Castellsague, X, Chen, Chen, Conway, D, Curado, Mp, Dal Maso, L, Daudt, Aw, Fabianova, E, Fernandez, L, Franceschi, S, Fukuyama, Ee, Hayes, Rb, Healy, C, Herrero, R, Holcatova, I, Kelsey, K, Kjaerheim, K, Koifman, S, Lagiou, P, La Vecchia, C, Lazarus, P, Levi, F, Lissowska, J, Macfarlane, T, Mates, D, Mcclean, M, Menezes, A, Merletti, F, Morgenstern, H, Muscat, J, Olshan, Af, Purdue, M, Ramroth, H, Rudnai, P, Schwartz, Sm, Serraino, D, Shangina, O, Smith, E, Sturgis, Em, Szeszenia Dabrowska, N, Thomson, P, Vaughan, Tl, Vilensky, M, Wei, Q, Winn, Dm, Wünsch Filho, V, Zhang, Zf, Znaor, A, Ferro, Giorgia, Brennan, P, Boffetta, Paolo, Hashibe, M, Lee, Yc50, Boccia, Stefania (ORCID:0000-0002-1864-749X), and Cadoni, Gabriella (ORCID:0000-0001-8244-784X)
- Abstract
BACKGROUND: Cigarette smoking is a major risk factor for head and neck cancer (HNC). To our knowledge, low cigarette smoking (<10 cigarettes per day) has not been extensively investigated in fine categories or among never alcohol drinkers. METHODS: We conducted a pooled analysis of individual participant data from 23 independent case-control studies including 19 660 HNC cases and 25 566 controls. After exclusion of subjects using other tobacco products including cigars, pipes, snuffed or chewed tobacco and straw cigarettes (tobacco product used in Brazil), as well as subjects smoking more than 10 cigarettes per day, 4093 HNC cases and 13 416 controls were included in the analysis. The lifetime average frequency of cigarette consumption was categorized as follows: never cigarette users, >0-3, >3-5, >5-10 cigarettes per day. RESULTS: Smoking >0-3 cigarettes per day was associated with a 50% increased risk of HNC in the study population [odds ratio (OR) = 1.52, 95% confidence interval (CI): (1.21, 1.90). Smoking >3-5 cigarettes per day was associated in each subgroup from OR = 2.01 (95% CI: 1.22, 3.31) among never alcohol drinkers to OR = 2.74 (95% CI: 2.01, 3.74) among women and in each cancer site, particularly laryngeal cancer (OR = 3.48, 95% CI: 2.40, 5.05). However, the observed increased risk of HNC for low smoking frequency was not found among smokers with smoking duration shorter than 20 years. CONCLUSION: Our results suggest a public health message that low frequency of cigarette consumption contributes to the development of HNC. However, smoking duration seems to play at least an equal or a stronger role in the development of HNC. © The Author 2015; all rights reserved. Published by Oxford University Press on behalf of the International Epidemiological Association. KEYWORDS: Head and neck cancer; low frequency cigarette smoking; pooled analysis; risk factors
- Published
- 2016
15. A genome-wide association study of upperaerodigestive tract cancers conducted within the INHANCE consortium
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McKay JD, Truong T, Gaborieau V, Chabrier A, Chuang SC, Byrnes G, Zaridze D, Shangina O, Szeszenia Dabrowska N, Lissowska J, Rudnai P, Fabianova E, Bucur A, Bencko V, Holcatova I, Janout V, Foretova L, Lagiou P, Trichopoulos D, Benhamou S, Bouchardy C, Ahrens W, Merletti F, Richiardi L, Talamini R, Barzan L, Kjaerheim K, Macfarlane GJ, Macfarlane TV, Simonato L, Canova C, Agudo A, Castellsagué X, Lowry R, Conway DI, McKinney PA, Healy CM, Toner ME, Znaor A, Curado MP, Koifman S, Menezes A, Wünsch Filho V, Neto JE, Garrote LF, Boccia S, Cadoni G, Arzani D, Olshan AF, Weissler MC, Funkhouser WK, Luo J, Lubiński J, Trubicka J, Lener M, Oszutowska D, Schwartz SM, Chen C, Fish S, Doody DR, Muscat JE, Lazarus P, Gallagher CJ, Chang SC, Zhang ZF, Wei Q, Sturgis EM, Wang LE, Franceschi S, Herrero R, Kelsey KT, McClean MD, Marsit CJ, Nelson HH, Romkes M, Buch S, Nukui T, Zhong S, Lacko M, Manni JJ, Peters WH, Hung RJ, McLaughlin J, Vatten L, Njølstad I, Goodman GE, Field JK, Liloglou T, Vineis P, Clavel Chapelon F, Palli D, Tumino R, Krogh V, González CA, Quirós JR, Martínez C, Navarro C, Ardanaz E, Larrañaga N, Khaw KT, Key T, Bueno de Mesquita HB, Peeters PH, Trichopoulou A, Linseisen J, Boeing H, Hallmans G, Overvad K, Tjønneland A, Kumle M, Riboli E, Välk K, Vooder T, Metspalu A, Zelenika D, Boland A, Delepine M, Foglio M, Lechner D, Blanché H, Gut IG, Galan P, Heath S, Hashibe M, Hayes RB, Boffetta P, Lathrop M, Brennan P., PANICO, SALVATORE, Mckay, Jd, Truong, T, Gaborieau, V, Chabrier, A, Chuang, Sc, Byrnes, G, Zaridze, D, Shangina, O, Szeszenia Dabrowska, N, Lissowska, J, Rudnai, P, Fabianova, E, Bucur, A, Bencko, V, Holcatova, I, Janout, V, Foretova, L, Lagiou, P, Trichopoulos, D, Benhamou, S, Bouchardy, C, Ahrens, W, Merletti, F, Richiardi, L, Talamini, R, Barzan, L, Kjaerheim, K, Macfarlane, Gj, Macfarlane, Tv, Simonato, L, Canova, C, Agudo, A, Castellsagué, X, Lowry, R, Conway, Di, Mckinney, Pa, Healy, Cm, Toner, Me, Znaor, A, Curado, Mp, Koifman, S, Menezes, A, Wünsch Filho, V, Neto, Je, Garrote, Lf, Boccia, S, Cadoni, G, Arzani, D, Olshan, Af, Weissler, Mc, Funkhouser, Wk, Luo, J, Lubiński, J, Trubicka, J, Lener, M, Oszutowska, D, Schwartz, Sm, Chen, C, Fish, S, Doody, Dr, Muscat, Je, Lazarus, P, Gallagher, Cj, Chang, Sc, Zhang, Zf, Wei, Q, Sturgis, Em, Wang, Le, Franceschi, S, Herrero, R, Kelsey, Kt, Mcclean, Md, Marsit, Cj, Nelson, Hh, Romkes, M, Buch, S, Nukui, T, Zhong, S, Lacko, M, Manni, Jj, Peters, Wh, Hung, Rj, Mclaughlin, J, Vatten, L, Njølstad, I, Goodman, Ge, Field, Jk, Liloglou, T, Vineis, P, Clavel Chapelon, F, Palli, D, Tumino, R, Krogh, V, Panico, Salvatore, González, Ca, Quirós, Jr, Martínez, C, Navarro, C, Ardanaz, E, Larrañaga, N, Khaw, Kt, Key, T, Bueno de Mesquita, Hb, Peeters, Ph, Trichopoulou, A, Linseisen, J, Boeing, H, Hallmans, G, Overvad, K, Tjønneland, A, Kumle, M, Riboli, E, Välk, K, Vooder, T, Metspalu, A, Zelenika, D, Boland, A, Delepine, M, Foglio, M, Lechner, D, Blanché, H, Gut, Ig, Galan, P, Heath, S, Hashibe, M, Hayes, Rb, Boffetta, P, Lathrop, M, and Brennan, P.
- Published
- 2011
16. The 12p13.33/RAD52 Locus and Genetic Susceptibility to Squamous Cell Cancers of Upper Aerodigestive Tract
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Delahaye Sourdeix, M, Oliver, J, Timofeeva, Mn, Gaborieau, V, Johansson, M, Chabrier, A, Wozniak, Mb, Brenner, Dr, Vallée, Mp, Anantharaman, D, Lagiou, P, Holcátová, I, Richiardi, L, Kjaerheim, K, Agudo, A, Castellsagué, X, Macfarlane, Tv, Barzan, L, Canova, C, Thakker, N, Conway, Di, Znaor, A, Healy, Cm, Ahrens, W, Zaridze, D, Szeszenia Dabrowska, N, Lissowska, J, Fabianova, E, Mates, In, Bencko, V, Foretova, L, Janout, V, Curado, Mp, Koifman, S, Menezes, A, Wünsch Filho, V, Eluf Neto, J, Boffetta, P, Garrote, Lf, Serraino, D, Lener, M, Jaworowska, E, Lubiński, J, Boccia, Stefania, Rajkumar, T, Samant, Ta, Mahimkar, Mb, Matsuo, K, Franceschi, S, Byrnes, G, Brennan, P, Mckay, Jd, Boccia, Stefania (ORCID:0000-0002-1864-749X), Delahaye Sourdeix, M, Oliver, J, Timofeeva, Mn, Gaborieau, V, Johansson, M, Chabrier, A, Wozniak, Mb, Brenner, Dr, Vallée, Mp, Anantharaman, D, Lagiou, P, Holcátová, I, Richiardi, L, Kjaerheim, K, Agudo, A, Castellsagué, X, Macfarlane, Tv, Barzan, L, Canova, C, Thakker, N, Conway, Di, Znaor, A, Healy, Cm, Ahrens, W, Zaridze, D, Szeszenia Dabrowska, N, Lissowska, J, Fabianova, E, Mates, In, Bencko, V, Foretova, L, Janout, V, Curado, Mp, Koifman, S, Menezes, A, Wünsch Filho, V, Eluf Neto, J, Boffetta, P, Garrote, Lf, Serraino, D, Lener, M, Jaworowska, E, Lubiński, J, Boccia, Stefania, Rajkumar, T, Samant, Ta, Mahimkar, Mb, Matsuo, K, Franceschi, S, Byrnes, G, Brennan, P, Mckay, Jd, and Boccia, Stefania (ORCID:0000-0002-1864-749X)
- Abstract
Genetic variants located within the 12p13.33/RAD52 locus have been associated with lung squamous cell carcinoma (LUSC). Here, within 5,947 UADT cancers and 7,789 controls from 9 different studies, we found rs10849605, a common intronic variant in RAD52, to be also associated with upper aerodigestive tract (UADT) squamous cell carcinoma cases (OR = 1.09, 95% CI: 1.04-1.15, p = 6x10(-4)). We additionally identified rs10849605 as a RAD52 cis-eQTL inUADT(p = 1x10(-3)) and LUSC (p = 9x10(-4)) tumours, with the UADT/LUSC risk allele correlated with increased RAD52 expression levels. The 12p13.33 locus, encompassing rs10849605/RAD52, was identified as a significant somatic focal copy number amplification in UADT(n = 374, q-value = 0.075) and LUSC (n = 464, q-value = 0.007) tumors and correlated with higher RAD52 tumor expression levels (p = 6x10(-48) and p = 3x10(-29) in UADT and LUSC, respectively). In combination, these results implicate increased RAD52 expression in both genetic susceptibility and tumorigenesis of UADT and LUSC tumors.
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- 2015
17. A genome-wide association study of upper aerodigestive tract cancers conducted within the INHANCE consortium
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Horwitz, M.S., McKay, J.D., Truong, T., Gaborieau, V., Chabrier, A., Chuang, S.-C., Byrnes, G., Zaridze, D., Shangina, O., Szeszenia-Dabrowska, N., Lissowska, J., Rudnai, P., Fabianova, E., Bucur, A., Bencko, V., Holcatova, I., Janout, V., Foretova, L., Lagiou, P., Trichopoulos, D., Benhamou, S., Bouchardy, C., Ahrens, W., Merletti, F., Richiardi, L., Talamini, R., Barzan, L., Kjaerheim, K., Macfarlane, G.J., Macfarlane, T.V., Simonato, L., Canova, C., Agudo, A., Castellsagué, X., Lowry, R., Conway, D.I., McKinney, P.A., Healy, C.M., Toner, M.E., Znaor, A., Curado, M.P., Koifman, S., Menezes, A., Wünsch-Filho, V., Neto, J.E., Garrote, L.F., Boccia, S., Cadoni, G., Arzani, D., Olshan, A.F., Weissler, M.C., Funkhouser, W.K., Luo, J., Lubiński, J., Trubicka, J., Lener, M., Oszutowska, D., Schwartz, S.M., Chen, C., Fish, S., Doody, D.R., Muscat, J.E., Lazarus, P., Gallagher, C.J., Chang, S.C., Zhang, Z.F., Wei, Q., Sturgis, E.M., Wang, L.E., Franceschi, S., Herrero, R., Kelsey, K.T., McClean, M.D., Marsit, C.J., Nelson, H.H., Romkes, M., Buch, S., Nukui, T., Zhong, S., Lacko, M., Manni, J.J., Peters, W.H.M., Hung, R.J., McLaughlin, J., Vatten, L., Njølstad, I., Goodman, G.E., Field, J.K., Liloglou, T., Vineis, P., Clavel-Chapelon, F., Palli, D., Tumino, R., Krogh, V., Panico, S., González, C.A., Quirós, J.R., Martínez, C., Navarro, C., Ardanaz, E., Larrañaga, N., Khaw, K.T., Key, T., Bueno-de-Mesquita, H. B., Peeters, P.H.M., Trichopoulou, A., Linseisen, J., Boeing, H., Hallmans, G., Overvad, K., Tjønneland, A., Kumle, M., Riboli, E., Välk, K., Vooder, T., Metspalu, A., Zelenika, D., Boland, A., Delepine, M., Foglio, M., Lechner, D., Blanché, H., Gut, I.G., Galan, P., Heath, S., Hashibe, M., Hayes, R.B., Boffetta, P., Lathrop, M., and Brennan, P.
- Abstract
Genome-wide association studies (GWAS) have been successful in identifying common genetic variation involved in susceptibility to etiologically complex disease. We conducted a GWAS to identify common genetic variation involved in susceptibility to upper aero-digestive tract (UADT) cancers. Genome-wide genotyping was carried out using the Illumina HumanHap300 beadchips in 2,091 UADT cancer cases and 3,513 controls from two large European multi-centre UADT cancer studies, as well as 4,821 generic controls. The 19 top-ranked variants were investigated further in an additional 6,514 UADT cancer cases and 7,892 controls of European descent from an additional 13 UADT cancer studies participating in the INHANCE consortium. Five common variants presented evidence for significant association in the combined analysis (p≤5×10−7). Two novel variants were identified, a 4q21 variant (rs1494961, p = 1×10−8) located near DNA repair related genes HEL308 and FAM175A (or Abraxas) and a 12q24 variant (rs4767364, p = 2×10−8) located in an extended linkage disequilibrium region that contains multiple genes including the aldehyde dehydrogenase 2 (ALDH2) gene. Three remaining variants are located in the ADH gene cluster and were identified previously in a candidate gene study involving some of these samples. The association between these three variants and UADT cancers was independently replicated in 5,092 UADT cancer cases and 6,794 controls non-overlapping samples presented here (rs1573496-ADH7, p = 5×10−8; rs1229984-ADH1B, p = 7×10−9; and rs698-ADH1C, p = 0.02). These results implicate two variants at 4q21 and 12q24 and further highlight three ADH variants in UADT cancer susceptibility.
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- 2011
18. A sex-specific association between a 15q25 variant and upper aerodigestive tract cancers
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Chen, D. Truong, T. Gaborieau, V. Byrnes, G. Chabrier, A. Chuang, S.-C. Olshan, A.F. Weissler, M.C. Luo, J. Romkes, M. Buch, S. Nukui, T. Franceschi, S. Herrero, R. Talamini, R. Kelsey, K.T. Christensen, B. McClean, M.D. Lacko, M. Manni, J.J. Peters, W.H.M. Lubiński, J. Trubicka, J. Lener, M. Muscat, J.E. Lazarus, P. Wei, Q. Sturgis, E.M. Zhang, Z.-F. Chang, S.-C. Wang, R. Schwartz, S.M. Chen, C. Benhamou, S. Lagiou, P. Holcátová, I. Richiardi, L. Kjaerheim, K. Agudo, A. Castellsagué, X. Macfarlane, T.V. Barzan, L. Canova, C. Thakker, N.S. Conway, D.I. Znaor, A. Healy, C.M. Ahrens, W. Zaridze, D. Szeszenia-Dabrowska, N. Lissowska, J. Fabianova, E. Bucur, A. Bencko, V. Foretova, L. Janout, V. Curado, M.P. Koifman, S. Menezes, A. Wünsch-Filho, V. Eluf-Neto, J. Fernandez, L. Boccia, S. Hashibe, M. Hayes, R.B. Boffetta, P. Brennan, P. McKay, J.D.
- Abstract
Background: Sequence variants located at 15q25 have been associated with lung cancer and propensity to smoke. We recently reported an association between rs16969968 and risk of upper aerodigestive tract (UADT) cancers (oral cavity, oropharynx, hypopharynx, larynx, and esophagus) in women (OR = 1.24, P = 0.003) with little effect in men (OR = 1.04, P = 0.35). Methods: In a coordinated genotyping study within the International Head and Neck Cancer Epidemiology (INHANCE) consortium, we have sought to replicate these findings in an additional 4,604 cases and 6,239 controls from 10 independent UADT cancer case - control studies. Results: rs16969968 was again associated with UADT cancers in women (OR = 1.21, 95% CI = 1.08-1.36, P = 0.001) and a similar lack of observed effect in men [OR = 1.02, 95% CI = 0.95-1.09, P = 0.66; P-heterogeneity (P het) = 0.01]. In a pooled analysis of the original and current studies, totaling 8,572 UADT cancer cases and 11,558 controls, the association was observed among females (OR = 1.22, 95% CI = 1.12-1.34, P = 7 × 10 -6) but not males (OR = 1.02, 95% CI = 0.97-1.08, P = 0.35; P het = 6 × 10-4). There was little evidence for a sex difference in the association between this variant and cigarettes smoked per day, with male and female rs16969968 variant carriers smoking approximately the same amount more in the 11,991 ever smokers in the pooled analysis of the 14 studies (Phet = 0.86). Conclusions: This study has confirmed a sex difference in the association between the 15q25 variant rs16969968 and UADT cancers. Impact: Further research is warranted to elucidate the mechanisms underlying these observations.©2011 AACR.
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- 2011
19. Global gene expression profiling of oral cavity cancers suggests molecular heterogeneity within anatomic subsites
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Severino, Patricia, Alvares, Adriana M., Michaluart, Pedro, Okamoto, Oswaldo K., Nunes, Fabio D., Moreira-Filho, Carlos A., Tajara, Eloiza H., Cury, P. M., Frizzera, A. P.Z., de Carvalho, M. B., Silva, A. M.A., Amar, A., Barbieri, R. B., Bastos, A. U., Carvalho-Neto, P. B., Casemiro, A. F., Chedid, H., Chiappini, P. B.O., Correia, L. A., Costa, A. C.W., Curioni, O. A., Franzi, S. A., Gazito, D., Gutierres, A. P., Lehn, C. N., Martins, A. E., Mercante, A. M.C., Porsani, A. F., Rapoport, A., Rossi, L., Santos, M., Souza, T. B., Takamori, J. T., Dias-Neto, E., Ojopi, E. P.B., Dias, T. H.G., Figueiredo, D. L.A., Mamede, R. C.M., Fukuyama, E. E., Góis-Filho, J. F., Cerione, M., Cicco, R., Settani, F., Valentim, P. J., Yamagushi, F., Cominato, M. L., Mendes, G. S., Paiva, R., Silva, M. J., Leopoldino, A. M., Silva, F. A.M., Moyses, R. A., Arap, S. S., Araújo, N. S.S., Araújo-Filho, V., Brandão, L. G., Cernea, C. R., Durazzo, M., Ferraz, A. R., Gallo, J., Guimarães, P. E.M., Magalhães, R. P., Montenegro, F. L.M., Silva-Filho, G. B., Smith, R. B., Stabenow, E., Tavares, M. R., Turcano, R., Volpi, E. M., Ramos, O., Silva, C., Moreira-Filho, C. A., Nóbrega, F. G. [UNESP], Nóbrega, M. P. [UNESP], Canto, A. L. [UNESP], Macarenco, R. [UNESP], Meneses, C. [UNESP], Correa, P. M.S. [UNESP], Bogossian, A. P. [UNESP], Nunes, F. D., Souza, S. C.O.M., Rodini, C. O., Xavier, F. C.A., Okamoto, O. K., Serafini, L. N., Severino, P., Silva, W. A., Brandão, R. M., Kaneto, C. M., Pinheiro, D. G., Santos, A. R.D., Silva, I. T., Tarlá, M. V.C., Silveira, N. J.F., Tajara, E. H., Rodrigues-Lisoni, F. C., Rodrigues, R. V., Polachini, G. M., Vidotto, A., Cunha, B. R., Carmona-Raphe, J., Wünsch-Filho, V., Costa, A., Figueiredo, R. O., Fortes, C. S., Inamine, R., López, R. V.M., Rodrigues, A. N., Zago, M. A., Instituto Israelita de Ensino e Pesquisa Albert Einstein, Hospital Heliópolis, Universidade de São Paulo (USP), Universidade Federal de São Paulo (UNIFESP), Faculdade de Medicina de São José do Rio Preto, Faculdade de Medicina, Instituto do Câncer Arnaldo Vieira de Carvalho, Universidade Estadual Paulista (UNESP), Instituto de Ensino e Pesquisa Albert Einstein, and UNIVAP
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Medicine(all) ,Microarray ,Cytoskeleton organization ,business.industry ,Biochemistry, Genetics and Molecular Biology(all) ,lcsh:R ,Short Report ,lcsh:Medicine ,General Medicine ,Disease ,Cell cycle ,Bioinformatics ,General Biochemistry, Genetics and Molecular Biology ,Gene expression profiling ,stomatognathic diseases ,lcsh:Biology (General) ,Gene expression ,Gene chip analysis ,Medicine ,lcsh:Science (General) ,business ,lcsh:QH301-705.5 ,Gene ,lcsh:Q1-390 - Abstract
Made available in DSpace on 2022-04-29T08:44:18Z (GMT). No. of bitstreams: 0 Previous issue date: 2008-01-01 Background: Oral squamous cell carcinoma (OSCC) is a frequent neoplasm, which is usually aggressive and has unpredictable biological behavior and unfavorable prognosis. The comprehension of the molecular basis of this variability should lead to the development of targeted therapies as well as to improvements in specificity and sensitivity of diagnosis. Results: Samples of primary OSCCs and their corresponding surgical margins were obtained from male patients during surgery and their gene expression profiles were screened using whole-genome microarray technology. Hierarchical clustering and Principal Components Analysis were used for data visualization and One-way Analysis of Variance was used to identify differentially expressed genes. Samples clustered mostly according to disease subsite, suggesting molecular heterogeneity within tumor stages. In order to corroborate our results, two publicly available datasets of microarray experiments were assessed. We found significant molecular differences between OSCC anatomic subsites concerning groups of genes presently or potentially important for drug development, including mRNA processing, cytoskeleton organization and biogenesis, metabolic process, cell cycle and apoptosis. Conclusion: Our results corroborate literature data on molecular heterogeneity of OSCCs. Differences between disease subsites and among samples belonging to the same TNM class highlight the importance of gene expression-based classification and challenge the development of targeted therapies. Centro de Pesquisa Experimental Instituto Israelita de Ensino e Pesquisa Albert Einstein Laboratório de Biologia Molecular Hospital Heliópolis Departamento de Cirurgia de Cabeça e Pescoço Hospital das Clínicas Faculdade de Medicina Universidade de São Paulo Departamento de Neurologia e Neurocirurgia Universidade Federal de São Paulo Departamento de Estomatologia Faculdade de Odontologia Universidade de São Paulo Departamento de Pediatria Faculdade de Medicina Universidade de São Paulo Departamento de Biologia Molecular Faculdade de Medicina de São José do Rio Preto Departamento de Genética e Biologia Evolutiva Instituto de Biociências Universidade de São Paulo Departamento de Patologia Faculdade de Medicina Hospital Heliópolis Departamento e Instituto de Psiquiatria Faculdade de Medicina USP Serviço de Cirurgia de Cabeça e Pescoço Faculdade de Medicina de Ribeirão Preto USP Serviço de Cirurgia de Cabeça e Pescoço Instituto do Câncer Arnaldo Vieira de Carvalho Departamento de Análises Clínicas Toxicológicas e Bromatológicas Faculdade de Ciências Farmacêuticas de Ribeirão Preto USP Departamento de Cirurgia de Cabeça e Pescoço Faculdade de Medicina USP Departamento de Pediatria Faculdade de Medicina USP Departamento de Biociências e Diagnóstico Bucal Faculdade de Odontologia UNESP Departamento de Estomatologia Faculdade de Odontologia USP Departamento de Neurologia e Neurocirurgia UNIFESP Departamento de Patologia Faculdade de Medicina de Ribeirão Preto USP Instituto de Ensino e Pesquisa Albert Einstein Departamento de Genética Faculdade de Medicina de Ribeirão Preto USP Ciências da Computação UNIVAP Departamento de Biologia Molecular Faculdade de Medicina Departamento de Epidemiologia Faculdade de Saúde Pública USP Departamento de Clínica Médica Faculdade de Medicina de Ribeirão Preto USP Departamento de Biociências e Diagnóstico Bucal Faculdade de Odontologia UNESP
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- 2008
20. Multiple ADH genes are associated with upper aerodigestive cancers
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Hashibe, M., McKay, J.D., Curado, M.P., Oliveira, J.C., Koifman, S., Koifman, R., Zaridze, D., Shangina, O., Wünsch-Filho, V., Eluf-Neto, J., Levi, J.E., Matos, E., Lagiou, P., Lagiou, E., Benhamou, S., Bouchardy, C., Szeszenia-Dabrowska, N., Menezes, A., Dall’, Agnol, M.M., Merletti, F., Richiardi, L., Fernandez, L., Lence, J., Talamini, R., Barzan, L., Mates, D., Mates, I.N., Kjaerheim, K., Macfarlane, G.J., Macfarlane, T.V., Simonato, L., Canova, C., Holcatova, I., Agudo, A., Castellsague, X., Lowry, R., Janout, V., Kollarova, H., Conway, D.I., McKinney, P.A., Znaor, Ariana, Fabianova, E., Bencko, V., Lissowska, J., Chabrier, A., Hung, R.J., Gaborieau, V., Boffetta, P., and Brennan, P.
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ADH genes ,upper aerodigestive cancers - Abstract
Alcohol is an important risk factor for upper aerodigestive cancers and is principally metabolized by alcohol dehydrogenase (ADH) enzymes. We have investigated six ADH genetic variants in over 3, 800 aerodigestive cancer cases and 5, 200 controls from three individual studies. Gene variants rs1229984 (ADH1B) and rs1573496 (ADH7) were significantly protective against aerodigestive cancer in each individual study and overall (P = 10(-10) and 10(-9), respectively). These effects became more apparent with increasing alcohol consumption (P for trend = 0.0002 and 0.065, respectively). Both gene effects were independent of each other, implying that multiple ADH genes may be involved in upper aerodigestive cancer etiology.
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- 2008
21. Using prior information from the medical literature in GWAS of oral cancer identifies novel susceptibility variant on chromosome 4--the AdAPT method
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Johansson, M, Roberts, A, Chen, D, Li, Yuan, Delahaye Sourdeix, M, Aswani, N, Greenwood, Ma, Benhamou, S, Lagiou, P, Holcátová, I, Richiardi, L, Kjaerheim, K, Agudo, A, Castellsagué, X, Macfarlane, Tv, Barzan, L, Canova, C, Thakker, N, Conway, Di, Znaor, A, Healy, Cm, Ahrens, W, Zaridze, D, Szeszenia Dabrowska, N, Lissowska, J, Fabiánová, E, Mates, In, Bencko, V, Foretova, L, Janout, V, Curado, Mp, Koifman, S, Menezes, A, Wünsch Filho, V, Eluf Neto, J, Boffetta, P, Franceschi, S, Herrero, R, Fernandez Garrote, L, Talamini, R, Boccia, Stefania, Galan, P, Vatten, L, Thomson, P, Zelenika, D, Lathrop, M, Byrnes, G, Cunningham, H, Brennan, P, Wakefield, J, Mckay, Jd, Boccia, Stefania (ORCID:0000-0002-1864-749X), Johansson, M, Roberts, A, Chen, D, Li, Yuan, Delahaye Sourdeix, M, Aswani, N, Greenwood, Ma, Benhamou, S, Lagiou, P, Holcátová, I, Richiardi, L, Kjaerheim, K, Agudo, A, Castellsagué, X, Macfarlane, Tv, Barzan, L, Canova, C, Thakker, N, Conway, Di, Znaor, A, Healy, Cm, Ahrens, W, Zaridze, D, Szeszenia Dabrowska, N, Lissowska, J, Fabiánová, E, Mates, In, Bencko, V, Foretova, L, Janout, V, Curado, Mp, Koifman, S, Menezes, A, Wünsch Filho, V, Eluf Neto, J, Boffetta, P, Franceschi, S, Herrero, R, Fernandez Garrote, L, Talamini, R, Boccia, Stefania, Galan, P, Vatten, L, Thomson, P, Zelenika, D, Lathrop, M, Byrnes, G, Cunningham, H, Brennan, P, Wakefield, J, Mckay, Jd, and Boccia, Stefania (ORCID:0000-0002-1864-749X)
- Abstract
Background: Genome-wide association studies (GWAS) require large sample sizes to obtain adequate statistical power, but it may be possible to increase the power by incorporating complementary data. In this study we investigated the feasibility of automatically retrieving information from the medical literature and leveraging this information in GWAS. Methods: We developed a method that searches through PubMed abstracts for pre-assigned keywords and key concepts, and uses this information to assign prior probabilities of association for each single nucleotide polymorphism (SNP) with the phenotype of interest - the Adjusting Association Priors with Text (AdAPT) method. Association results from a GWAS can subsequently be ranked in the context of these priors using the Bayes False Discovery Probability (BFDP) framework. We initially tested AdAPT by comparing rankings of known susceptibility alleles in a previous lung cancer GWAS, and subsequently applied it in a two-phase GWAS of oral cancer. Results: Known lung cancer susceptibility SNPs were consistently ranked higher by AdAPT BFDPs than by p-values. In the oral cancer GWAS, we sought to replicate the top five SNPs as ranked by AdAPT BFDPs, of which rs991316, located in the ADH gene region of 4q23, displayed a statistically significant association with oral cancer risk in the replication phase (per-rare-allele log additive p-value [p(trend)] = 2.5 x 10(-3)). The combined OR for having one additional rare allele was 0.83 (95% CI: 0.76-0.90), and this association was independent of previously identified susceptibility SNPs that are associated with overall UADT cancer in this gene region. We also investigated if rs991316 was associated with other cancers of the upper aerodigestive tract (UADT), but no additional association signal was found. Conclusion: This study highlights the potential utility of systematically incorporating prior knowledge from the medical literature in genome-wide analyses using the AdAPT methodolog
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- 2012
22. A genome-wide association study of upper aerodigestive tract cancers conducted within the INHANCE consortium
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McKay, JD, Truong, T, Gaborieau, V, Chabrier, A, Chuang, SC, Byrnes, G, Zaridze, D, Shangina, O, Szeszenia-Dabrowska, N, Lissowska, J, Rudnai, P, Fabianova, E, Bucur, A, Bencko, V, Holcatova, I, Janout, V, Foretova, L, Lagiou, P, Trichopoulos, D, Benhamou, S, Bouchardy, C, Ahrens, W, Merletti, F, Richiardi, L, Talamini, R, Barzan, L, Kjaerheim, K, Macfarlane, GJ, Macfarlane, TV, Simonato, L, Canova, C, Agudo, A, Castellsagué, X, Lowry, R, Conway, DI, McKinney, PA, Healy, CM, Toner, ME, Znaor, A, Curado, MP, Koifman, S, Menezes, A, Wünsch-Filho, V, Neto, JE, Garrote, LF, Boccia, S, Cadoni, G, Arzani, D, Olshan, AF, Weissler, MC, Funkhouser, WK, Luo, J, Lubiński, J, Trubicka, J, Lener, M, Oszutowska, D, Schwartz, SM, Chen, C, Fish, S, Doody, DR, Muscat, JE, Lazarus, P, Gallagher, CJ, Chang, SC, Zhang, ZF, Wei, Q, Sturgis, EM, Wang, LE, Franceschi, S, Herrero, R, Kelsey, KT, McClean, MD, Marsit, CJ, Nelson, HH, Romkes, M, Buch, S, Nukui, T, Zhong, S, Lacko, M, Manni, JJ, Peters, WHM, Hung, RJ, McLaughlin, J, Vatten, L, Njølstad, I, Goodman, GE, Field, JK, Liloglou, T, Vineis, P, Clavel-Chapelon, F, Palli, D, Tumino, R, Krogh, V, Panico, S, González, CA, Quirós, JR, Martínez, C, Navarro, C, Ardanaz, E, Larrañaga, N, McKay, JD, Truong, T, Gaborieau, V, Chabrier, A, Chuang, SC, Byrnes, G, Zaridze, D, Shangina, O, Szeszenia-Dabrowska, N, Lissowska, J, Rudnai, P, Fabianova, E, Bucur, A, Bencko, V, Holcatova, I, Janout, V, Foretova, L, Lagiou, P, Trichopoulos, D, Benhamou, S, Bouchardy, C, Ahrens, W, Merletti, F, Richiardi, L, Talamini, R, Barzan, L, Kjaerheim, K, Macfarlane, GJ, Macfarlane, TV, Simonato, L, Canova, C, Agudo, A, Castellsagué, X, Lowry, R, Conway, DI, McKinney, PA, Healy, CM, Toner, ME, Znaor, A, Curado, MP, Koifman, S, Menezes, A, Wünsch-Filho, V, Neto, JE, Garrote, LF, Boccia, S, Cadoni, G, Arzani, D, Olshan, AF, Weissler, MC, Funkhouser, WK, Luo, J, Lubiński, J, Trubicka, J, Lener, M, Oszutowska, D, Schwartz, SM, Chen, C, Fish, S, Doody, DR, Muscat, JE, Lazarus, P, Gallagher, CJ, Chang, SC, Zhang, ZF, Wei, Q, Sturgis, EM, Wang, LE, Franceschi, S, Herrero, R, Kelsey, KT, McClean, MD, Marsit, CJ, Nelson, HH, Romkes, M, Buch, S, Nukui, T, Zhong, S, Lacko, M, Manni, JJ, Peters, WHM, Hung, RJ, McLaughlin, J, Vatten, L, Njølstad, I, Goodman, GE, Field, JK, Liloglou, T, Vineis, P, Clavel-Chapelon, F, Palli, D, Tumino, R, Krogh, V, Panico, S, González, CA, Quirós, JR, Martínez, C, Navarro, C, Ardanaz, E, and Larrañaga, N
- Abstract
Genome-wide association studies (GWAS) have been successful in identifying common genetic variation involved in susceptibility to etiologically complex disease. We conducted a GWAS to identify common genetic variation involved in susceptibility to upper aero-digestive tract (UADT) cancers. Genome-wide genotyping was carried out using the Illumina HumanHap300 beadchips in 2,091 UADT cancer cases and 3,513 controls from two large European multi-centre UADT cancer studies, as well as 4,821 generic controls. The 19 top-ranked variants were investigated further in an additional 6,514 UADT cancer cases and 7,892 controls of European descent from an additional 13 UADT cancer studies participating in the INHANCE consortium. Five common variants presented evidence for significant association in the combined analysis (p≤5×10-7). Two novel variants were identified, a 4q21 variant (rs1494961, p = 1×10-8) located near DNA repair related genes HEL308 and FAM175A (or Abraxas) and a 12q24 variant (rs4767364, p = 2×10-8) located in an extended linkage disequilibrium region that contains multiple genes including the aldehyde dehydrogenase 2 (ALDH2) gene. Three remaining variants are located in the ADH gene cluster and were identified previously in a candidate gene study involving some of these samples. The association between these three variants and UADT cancers was independently replicated in 5,092 UADT cancer cases and 6,794 controls non-overlapping samples presented here (rs1573496-ADH7, p = 5×10-8; rs1229984-ADH1B, p = 7×10-9; and rs698-ADH1C, p = 0.02). These results implicate two variants at 4q21 and 12q24 and further highlight three ADH variants in UADT cancer susceptibility. © 2011 McKay et al.
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- 2011
23. Education, tobacco smoking, alcohol consumption, and IL-2 and IL-6 gene polymorphisms in the survival of head and neck cancer
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López, R.V.M., primary, Zago, M.A., additional, Eluf-Neto, J., additional, Curado, M.P., additional, Daudt, A.W., additional, da Silva-Junior, W.A., additional, Zanette, D.L., additional, Levi, J.E., additional, de Carvalho, M.B., additional, Kowalski, L.P., additional, Abrahão, M., additional, de Góis-Filho, J.F., additional, Boffetta, P., additional, and Wünsch-Filho, V., additional
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- 2011
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24. TP53 and EGFR mutations in combination with lifestyle risk factors in tumours of the upper aerodigestive tract from South America
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Szymańska, K., primary, Levi, J.E., additional, Menezes, A., additional, Wünsch-Filho, V., additional, Eluf-Neto, J., additional, Koifman, S., additional, Matos, E., additional, Daudt, A.W., additional, Curado, M.P., additional, Villar, S., additional, Pawlita, M., additional, Waterboer, T., additional, Boffetta, P., additional, Hainaut, P., additional, and Brennan, P., additional
- Published
- 2009
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25. Sexual behaviors and the risk of head and neck cancers
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Heck, J.E., primary, Berthiller, J., additional, Vaccarella, S., additional, Winn, D.M., additional, Smith, E.M., additional, Shangina, O., additional, Schwartz, S.M., additional, Purdue, M., additional, Eluf-Neto, J., additional, Menezes, A., additional, McClean, M.D., additional, Matos, E., additional, Koifman, S., additional, Kelsey, K.T., additional, Herrero, R., additional, Hayes, R.B., additional, Franceschi, S., additional, Wünsch-Filho, V., additional, Fernandez, L., additional, Daudt, A.W., additional, Curado, M.P., additional, Chen, C., additional, Castellsagué, X., additional, Ferro, G., additional, Brennan, P., additional, Boffetta, P., additional, and Hashibe, M., additional
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- 2008
- Full Text
- View/download PDF
26. Prognostic significance of matrix metalloproteinases 1 and 3 polymorphisms in squamous cell carcinoma of the head and neck
- Author
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López, R.V.M., primary, Zago, M.A., additional, Eluf-Neto, J., additional, Silva-Jr, W.A., additional, Zanette, D.L., additional, Levi, J.E., additional, Carvalho, M.B., additional, Curado, M.P., additional, Boffetta, P., additional, and Wünsch-Filho, V., additional
- Published
- 2008
- Full Text
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27. TP53 mutations and HPV infections in tumours of the upper aerodigestive tract from Latin America
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Szymañska, K., primary, Levi, J.E., additional, Daudt, A.W., additional, Wünsch-Filho, V., additional, Eluf-Neto, J., additional, Curado, M.P., additional, Koifman, S., additional, Menezes, A., additional, Matos, E., additional, Fernandez, L., additional, Boffetta, P., additional, Tommassino, M., additional, Gheit, T., additional, Hainaut, P., additional, and Brennan, P., additional
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- 2008
- Full Text
- View/download PDF
28. O151 Resolution capacity of the oral cancer prevention and early diagnosis program in Sãao Paulo, Brazil
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Haye Biazevic, M.G., primary, Ferreira Antunes, J.L., additional, Toporcov, T.N., additional, and Wünsch-Filho, V., additional
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- 2007
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- View/download PDF
29. P24 The immediate impact of primary surgery on health-related quality of life of hospitalized patients with oral and oropharyngeal cancer
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Biazevic, M.G.H., primary, Antunes, J.L.F., additional, Togni, J., additional, Andrade, F.P., additional, Carvalho, M.B., additional, and Wünsch-Filho, V., additional
- Published
- 2007
- Full Text
- View/download PDF
30. The effect of performing corrections on reported uterine cancer mortality data in the city of São Paulo
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Antunes, J.L.F., primary and Wünsch-Filho, V., additional
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- 2006
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- View/download PDF
31. Epidemiological studies in the information and genomics era: experience of the Clinical Genome of Cancer Project in São Paulo, Brazil
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Wünsch-Filho, V., primary, Eluf-Neto, J., additional, Lotufo, P.A., additional, da Silva Jr., W.A., additional, and Zago, M.A., additional
- Published
- 2006
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32. Effectiveness of BCG vaccination against tuberculous meningitis: a case-control study in São Paulo, Brazil
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Wünsch Filho, V., de Castilho, E. A., Rodrigues, L. C., and Huttly, S. R.
- Subjects
Urban Population ,Case-Control Studies ,Child, Preschool ,Tuberculosis, Meningeal ,Communicable Disease Control ,BCG Vaccine ,Infant, Newborn ,Humans ,Infant ,Brazil ,Research Article - Abstract
A case-control study was carried out in the Metropolitan Region of São Paulo, Brazil, to determine the protection against tuberculous meningitis conferred by BCG vaccination to children aged less than 5 years. The BCG vaccination coverage in the study area was about 88%. A total of 72 tuberculous meningitis patients were studied as well as 505 neighbourhood and 81 hospital controls. Analysis of the data using a conditional logistic regression for matched case-control studies indicated that the efficacy of BCG was similar for both groups of controls, that for neighbourhood controls (84.5%) being slightly greater than that for hospital controls (80.2%). No significant interactions were found between vaccination status and sex, age, or socioeconomic status.
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- 1990
33. HUMAN EXPOSURE TO ORGANOCHLORINE COMPOUNDS AT CIDADE DOS MENINOS, DUQUE DE CAXIAS, RIO DE JANEIRO, BRAZIL
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Soares Da Silva, A, primary, Carvalho, Tess BH, additional, Cassanha, Galvco LA, additional, Mendes, R, additional, Froes, Asmus Cl, additional, Franco, Netto G, additional, Finkelman, J, additional, Abreu, E, additional, Azevedoe Silva, Mendonca G, additional, Eluf, Neto J, additional, Fernandes, A S, additional, Escamilla, J A, additional, Palácios Da Cunha, E Melo De Ao M, additional, Da Cruz, Gouveia N, additional, Koifman, S F, additional, Wünsch, Filho V F, additional, De Magalhães, Câmara V F, additional, and Andrade, Carvalho W F, additional
- Published
- 2003
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34. Amianto no Brasil: conflitos científicos e econômicos
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WÜNSCH FILHO, V., primary, NEVES, H., additional, and MONCAU, J.E., additional
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- 2001
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35. Occupational risk factors of lung cancer in São Paulo, Brazil
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Wünsch-Filho, V, primary, Moncau, JE, additional, Mirabelli, D, additional, and Boffetta, Paolo, additional
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- 1998
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36. Methodological considerations in case-control studies to evaluate BCG vaccine effectiveness.
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WÜNSCH-FILHO, VICTOR, MONCAU, JOSE EDUARDO CAJADO, NAKAO, NEUSA, Wünsch-Filho, V, Moncau, J E, and Nakao, N
- Abstract
Several case-control studies evaluating the effectiveness of BCG vaccine in the last decade have presented contradictory results like previous prospective studies. Methodological differences could explain some of the case-control study results. This study explores the possibility that contradictory results could be imputed to the choice of different series of controls. Three controls were compared for each case of tuberculous meningitis: neighbourhood, hospital and household. BCG effectiveness estimates were 86.8%, 92.0% and 29.5%, respectively. The data indicated an interaction between BCG vaccine status and tuberculous focus. This could have influenced the lower effectiveness estimates found when cases were compared with household controls. The paper discusses aspects related to case-control studies applied to evaluate BCG effectiveness such as: incubation period and sufficient time since vaccination to allow development of an immune response; the presence of a tuberculous focus among the groups of cases and controls and the interaction between focus and BCG vaccination; recall bias; and optimum selection of controls in case-control studies in the context of infectious diseases. [ABSTRACT FROM AUTHOR]
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- 1993
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37. Occupational risks for laryngeal cancer: A case-control study | Riscos ocupacionais para o câncer de laringe: Um estudo caso-controle
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Sartor, S. G., Eluf-Neto, J., Travier, N., Wünsch Filho, V., Arcuri, A. S. A., Luiz Paulo Kowalski, Boffetta, P., Sartor, S.G., Eluf-Neto, J., Travier, N., Wünsch Filho, V., Arcuri, A.S.A., Kowalski, L.P., and Boffetta, P.
- Subjects
Occupational risks laryngeal cancer case-control study Riscos ocupacionais câncer laringe estudo caso-controle ,complex mixtures - Abstract
The most solidly established risk factors for laryngeal cancer are tobacco and alcohol. As for occupational factors, the only established carcinogen is exposure to strong inorganic acid mists. However, asbestos, pesticides, paints, gasoline, diesel engine emissions, dusts, and other factors have been reported in the literature as occupational agents that increase the risk of laryngeal cancer. A hospital-based case-control study was conducted to investigate occupational risk factors for laryngeal cancer. Detailed data on smoking, alcohol consumption, and occupational history were collected for 122 laryngeal cancers and 187 controls matched by frequency (according to sex and age). Laryngeal cancer was associated with exposure to respirable free crystalline silica (OR = 1.83; 95%CI: 1.00-3.36), soot (from coal, coke, fuel oil, or wood) (odds ratio - OR = 1.78; 95% confidence interval - 95%CI: 1.03-3.03), fumes (OR = 2.55; 95%CI: 1.14-5.67), and live animals (OR = 1.80; 95%CI: 1.02-3.19).
38. Dietary patterns and risk of oral cancer: a case-control study in São Paulo, Brazil
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Marchioni, D. M., Fisberg, R. M., Francisco Góis Filho, J., Kowalski, L. P., Marcos Brasilino de Carvalho, Abrahão, M., Latorre, M. O. R., Eluf-Neto, J., and Wünsch Filho, V.
39. [Dietary factors and oral cancer: a case-control study in Greater Metropolitan São Paulo, Brazil]
- Author
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Marchioni, D. M., Fisberg, R. M., Góis Filho, J. F., Kowalski, L. P., Carvalho, M. B., Abrahão, M., Latorre, M. O. R., Eluf Neto, J., and Wünsch-Filho, V.
40. Survival and quality of life of patients with oral and oropharyngeal cancer at 1-year follow-up of tumor resection
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Biazevic, M. G. H., Jose Leopoldo Ferreira Antunes, Togni, J., Andrade, F. P., Carvalho, M. B., and Wünsch-Filho, V.
41. Erratum: (Cadernos de Saude Publica (2006) 23, (553-564))
- Author
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Marchioni, D. M. L., Regina Fisberg, Góis Filho, J. F., Kowalski, L. P., Carvalho, M. B., Abrahão, M., Latorre, M. D. R. D. D. O., Neto, J. E., and Wünsch-Filho, V.
42. The effectiveness of the oral cancer prevention and early diagnosis program in São Paulo, Brazil.
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Antunes JLF, Toporcov TN, and Wünsch-Filho V
- Abstract
OBJECTIVE: To evaluate the results of the 2004 oral cancer prevention and early diagnosis program carried out in conjunction with the annual flu vaccination campaign for the elderly in the state of Sao Paulo, Brazil. METHODS: Data concerning the follow-up of patients referred for diagnostic investigation of soft tissue lesions identified on visual inspection were collected from the reports issued by the State Health Department/Oral Health Technical Center. The following two characteristics were evaluated as indicators of the program's effectiveness: (1) the number of people whose problem was resolved at the primary care level or in referral services and (2) the number of persons with a confirmed diagnosis of oral cancer. The following indicators were used to assess program ineffectiveness: (1) patients not appearing at the referral unit, (2) inability of the primary care services to resolve the problem, and (3) the absence of follow-up information on patients. RESULTS: In 2004, 238 087 people >/= 60 years old were examined, corresponding to 6.8% of the state population in this age group (3 494 555 people). The program was carried out in 23 of the state's 24 health regions. However, only 8 of the regions recorded follow-up information. Of the 5 280 people in the 8 regions who were referred for diagnostic investigation of soft tissue lesions, 60.5% had their problem resolved, 0.5% (26 cases) had a confirmed diagnosis of oral cancer, and 22.5% did not have the diagnostic investigation completed. For 16.5% of the cases referred for further study, there was no information available concerning follow-up and outcomes. CONCLUSIONS: The oral cancer prevention and early diagnosis program was ineffective, given the lack of monitoring of results in most parts of the state of Sao Paulo, and the high proportion of patients whose soft tissue lesion was not resolved. The usefulness of continuing the program in future years needs to be evaluated. [ABSTRACT FROM AUTHOR]
- Published
- 2007
43. Alcohol and cigarette consumption predict mortality in patients with head and neck cancer: a pooled analysis within the International Head and Neck Cancer Epidemiology (INHANCE) Consortium
- Author
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Stefania Boccia, Cristina Bosetti, Livia Petrelli, Rossana Verónica Mendoza López, Luca Giraldi, Gabriella Cadoni, Werner Garavello, Cristina Canova, Diego Serraino, Emanuele Leoncini, Mia Hashibe, Lorenzo Simonato, Lorenzo Richiardi, Victor Wünsch-Filho, Keitaro Matsuo, Paolo Boffetta, Dario Arzani, Jerry Polesel, Yuan Chin Amy Lee, M. B. de Carvalho, C. La Vecchia, Roberta Pastorino, Giraldi, L, Leoncini, E, Pastorino, R, Wunsch-Filho, V, de Carvalho, M, Lopez, R, Cadoni, G, Arzani, D, Petrelli, L, Matsuo, K, Bosetti, C, La Vecchia, C, Garavello, W, Polesel, J, Serraino, D, Simonato, L, Canova, C, Richiardi, L, Boffetta, P, Hashibe, M, Lee, Y, Boccia, S, and Giraldi, L. and Leoncini, E. and Pastorino, R. and Wünsch-Filho, V. and de Carvalho, M. and Lopez, R. and Cadoni, G. and Arzani, D. and Petrelli, L. and Matsuo, K. and Bosetti, C. and La Vecchia, C. and Garavello, W. and Polesel, J. and Serraino, D. and Simonato, L. and Canova, C. and Richiardi, L. and Boffetta, P. and Hashibe, M. and Lee, Y. and Boccia, S.
- Subjects
Larynx ,Oncology ,Male ,Epidemiology ,0302 clinical medicine ,Japan ,Risk Factors ,cancer mortality ,030212 general & internal medicine ,Univariate analysis ,Prognostic factor ,Head and Neck Neoplasm ,adult ,international cooperation ,Hazard ratio ,Smoking ,drinking behavior ,Hematology ,Middle Aged ,hypopharynx cancer ,Prognosis ,educational statu ,3. Good health ,Europe ,Survival Rate ,Head and neck cancer ,Pooled analysis ,Prognostic factors ,Alcohol Drinking ,Female ,Follow-Up Studies ,Head and Neck Neoplasms ,Humans ,International Agencies ,Meta-Analysis as Topic ,medicine.anatomical_structure ,Italy ,priority journal ,Pooled analysi ,International Agencie ,030220 oncology & carcinogenesis ,meta analysis (topic) ,Settore MED/31 - OTORINOLARINGOIATRIA ,pooled analysis ,Brazil ,Human ,medicine.medical_specialty ,lifestyle ,Prognosi ,alcohol consumption ,overall survival ,cohort analysi ,cancer prognosi ,Article ,Follow-Up Studie ,03 medical and health sciences ,Internal medicine ,medicine ,Carcinoma ,follow up ,Survival rate ,head and neck tumor ,business.industry ,cancer staging ,Risk Factor ,Cancer ,larynx cancer ,prognostic factors ,Original Articles ,medicine.disease ,mouth cancer ,oropharynx cancer ,major clinical study ,mortality ,cancer localization ,survival rate, Alcohol Drinking ,head and neck cancer ,business - Abstract
Background: This study evaluated whether demographics, pre-diagnosis lifestyle habits and clinical data are associated with the overall survival (OS) and head and neck cancer (HNC)-specific survival in patients with HNC. Patients and methods: We conducted a pooled analysis, including 4759 HNC patients from five studies within the International Head and Neck Cancer Epidemiology (INHANCE) Consortium. Cox proportional hazard ratios (HRs) and the corresponding 95% confidence intervals (CIs) were estimated including terms reported significantly associated with the survival in the univariate analysis. Results: Five-year OS was 51.4% for all HNC sites combined: 50.3% for oral cavity, 41.1% for oropharynx, 35.0% for hypopharynx and 63.9% for larynx. When we considered HNC-specific survival, 5-year survival rates were 57.4% for all HNC combined: 54.6% for oral cavity, 45.4% for oropharynx, 37.1% for hypopharynx and 72.3% for larynx. Older ages at diagnosis and advanced tumour staging were unfavourable predictors of OS and HNC-specific survival. In laryngeal cancer, low educational level was an unfavourable prognostic factor for OS (HR=2.54, 95% CI 1.01-6.38, for high school or lower versus college graduate), and status and intensity of alcohol drinking were prognostic factors both of the OS (current drinkers HR=1.73, 95% CI 1.16-2.58) and HNC-specific survival (current drinkers HR=2.11, 95% CI 1.22-3.66). In oropharyngeal cancer, smoking status was an independent prognostic factors for OS. Smoking intensity ( > 20 cigarettes/day HR=1.41, 95% CI 1.03-1.92) was also an independent prognostic factor for OS in patients with cancer of the oral cavity. Conclusions: OS and HNC-specific survival differ among HNC sites. Pre-diagnosis cigarette smoking is a prognostic factor of the OS for patients with cancer of the oral cavity and oropharynx, whereas pre-diagnosis alcohol drinking is a prognostic factor of OS and HNC-specific survival for patients with cancer of the larynx. Low educational level is an unfavourable prognostic factor for OS in laryngeal cancer patients. © The Author 2017. Published by Oxford University Press on behalf of the European Society for Medical Oncology. All rights reserved.
- Published
- 2017
44. The INHANCE consortium: toward a better understanding of the causes and mechanisms of head and neck cancer
- Author
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Neonila Szeszenia-Dabrowska, Dana Mates, Danièle Luce, Lorenzo Simonato, José Eluf-Neto, Michael Pawlita, Elaine M. Smith, Kim De Ruyck, Gwenn Menvielle, Cristina Bosetti, Deborah M. Winn, David Zaridze, Gabriella Cadoni, Keitaro Matsuo, Diego Serraino, Isabelle Stücker, Richard B. Hayes, Mia Hashibe, Andrew F. Olshan, Robert I. Haddad, David I. Conway, Guo-Pei Yu, Tatiana V. Macfarlane, Simone Benhamou, Chu Chen, Brenda Diergaarde, Maura L. Gillison, Paul Brennan, Michael D. McClean, Kristina Kjærheim, Vladimir Bencko, Peter Rudnai, Guojun Li, Eleonora Fabianova, Pagona Lagiou, Thomas L. Vaughan, Witold Zatonski, Silvia Franceschi, Gypsyamber D'Souza, Rayjean J. Hung, Victor Wünsch-Filho, Antonio Agudo, Yuan Chin Amy Lee, Martin Lacko, Erich M. Sturgis, Xavier Castellsagué, Fabio Levi, Luigino Dal Maso, Jolanta Lissowska, Carlo La Vecchia, Franco Merletti, Steve Schwartz, Oxana Shangina, Ariana Znaor, Gregory T. Wolf, Jonathan N. Hofmann, Ivana Holcatova, Wolfgang Ahrens, Rolando Herrero, Alexander W. Daudt, Kirsten B. Moysich, Heribert Ramroth, Karl T. Kelsey, Maria Paula Curado, Zuo-Feng Zhang, Ana M. B. Menezes, Philip Lazarus, Laura S. Rozek, Tongzhang Zheng, Paolo Boffetta, Jose P. Zevallos, Peter Thomson, Claire M. Healy, Stefania Boccia, Wilbert H.M. Peters, Stimson P. Schantz, Marta Vilensky, Joshua E. Muscat, Hermann Brenner, Sergio Koifman, Geoffrey Liu, Manoj B. Mahimkar, Leticia Fernandez, Winn, D.M., Lee, Y.-C., Hashibe, M., Boffetta, P., Agudo, A., Ahrens, W., Bencko, V., Benhamou, S., Boccia, S., Bosetti, C., Brennan, P., Brenner, H., Cadoni, G., Castellsague, X., Chen, C., Conway, D., Curado, M.P., D'Souza, G., Maso, L.D., Daudt, A.W., Ruyck, K.D., Diergaarde, B., Eluf-Neto, J., Fabianova, E., Fernandez, L., Franceschi, S., Gillison, M., Haddad, R.I., Hayes, R., Healy, C., Herrero, R., Hofmann, J., Holcátová, I., Hung, R., Kelsey, K., Kjaerheim, K., Koifman, S., Vecchia, C.L., Lacko, M., Lagiou, P., Lazarus, P., Levi, F., Li, G., Lissowska, J., Liu, G., Luce, D., Macfarlane, T., Mahimkar, M., Mates, D., Matsuo, K., McClean, M., Menezes, A., Menvielle, G., Merletti, F., Moysich, K., Muscat, J., Olshan, A., Pawlita, M., Peters, W.H.M., Ramroth, H., Rozek, L., Rudnai, P., Schantz, S., Schwartz, S., Serraino, D., Shangina, O., Simonato, L., Smith, E., Stucker, I., Sturgis, E.M., Szeszenia-Dabrowska, Neonila and Thomson, P., Vaughan, T., Vilensky, M., Wolf, G., Wünsch-Filho, V., Yu, G., Zaridze, D., Zatonski, W., Zevallos, J.P., Zhang, Z.-F., Zheng, T.-Z., and Znaor, A.
- Subjects
Larynx ,Data Pooling ,Oncology ,medicine.medical_specialty ,Research groups ,Alcohol Drinking ,Scientific productivity ,Risk Factors ,Internal medicine ,Epidemiology ,Humans ,Medicine ,Cooperative Behavior ,Family history ,Settore MED/42 - IGIENE GENERALE E APPLICATA ,General Dentistry ,business.industry ,Smoking ,Head and neck cancer ,Confounding ,medicine.disease ,Diet ,Surgery ,medicine.anatomical_structure ,Socioeconomic Factors ,Otorhinolaryngology ,Head and Neck Neoplasms ,epidemiology ,head and neck cancer ,Settore MED/31 - OTORINOLARINGOIATRIA ,business - Abstract
The International Head and Neck Cancer Epidemiology (INHANCE) consortium is a collaboration of research groups leading large epidemiology studies to improve the understanding of the causes and mechanisms of head and neck cancer. The consortium includes investigators of 35 studies who have pooled their data on 25 500 patients with head and neck cancer (i.e., cancers of the oral cavity, oropharynx, hypopharynx, and larynx) and 37 100 controls. The INHANCE analyses have confirmed that tobacco use and alcohol intake are key risk factors of these diseases and have provided precise estimates of risk and dose response, the benefit of quitting, and the hazard of smoking even a few cigarettes per day. Other risk factors include short height, lean body mass, low education and income, and a family history of head and neck cancer. Risk factors are generally similar for oral cavity, pharynx, and larynx, although the magnitude of risk may vary. Some major strengths of pooling data across studies include more precise estimates of risk and the ability to control for potentially confounding factors and to examine factors that may interact with each other. The INHANCE consortium provides evidence of the scientific productivity and discoveries that can be obtained from data pooling projects. © 2015 John Wiley & Sons A/S.
- Published
- 2015
45. Genome-wide association analyses identify new susceptibility loci for oral cavity and pharyngeal cancer
- Author
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Stefania Boccia, Wilbert H.M. Peters, Kristina Kjærheim, James McKay, Christopher I. Amos, David I. Conway, Dana Mates, Ana Maria Menezes, Antonio Agudo, Brenda Diergaarde, Rolando Herrero, Valerie Gaborieau, Martin Lacko, Cristina Canova, Neonila Szeszenia-Dąbrowska, Lorenzo Richiardi, Xiangjun Xiao, Victor Wünsch-Filho, Pagona Lagiou, David Zaridze, Maria Paula Curado, H. Bas Bueno-de-Mesquita, Mark C. Weissler, Rayjean J. Hung, Paolo Boffetta, Claire M. Healy, Marcos Brasilino de Carvalho, Fábio Daumas Nunes, Steve Thomas, Devasena Anantharaman, Paul Brennan, Mattias Johansson, Geoffrey Liu, Oxana Shangina, Ariana Znaor, Corina Lesseur, Eleonora Fabianova, Gabriella Cadoni, Andy R Ness, Eloiza H. Tajara, Gary J. Macfarlane, Jennifer R. Grandis, Annika Steffen, Jerry Polesel, Max Robinson, Marta Vilensky, Andrew F. Olshan, Wolfgang Ahrens, Silvia Franceschi, Amelie Chabrier, José Eluf-Neto, Jolanta Lissowska, Ivana Holcatova, Xavier Castellsagué, Nofer Institute of Occupational Medicine, Łódź, Poland, RS: GROW - R2 - Basic and Translational Cancer Biology, MUMC+: MA Keel Neus Oorheelkunde (9), Lesseur, C., Diergaarde, B., Olshan, A.F., Wünsch-Filho, V., Ness, A.R., Liu, G., Lacko, M., Eluf-Neto, J., Franceschi, S., Lagiou, P., Macfarlane, G.J., Richiardi, L., Boccia, S., Polesel, J., Kjaerheim, K., Zaridze, D., Johansson, M., Menezes, A.M., Curado, M.P., Robinson, M., Ahrens, W., Canova, C., Znaor, A., Castellsagué, X., Conway, D.I., Holcátová, I., Mates, D., Vilensky, M., Healy, C.M., Szeszenia-Dabrowska, N., Fabiánová, E., Lissowska, J., Grandis, J.R., Weissler, M.C., Tajara, E.H., Nunes, F.D., De Carvalho, M.B., Thomas, S., Hung, R.J., Peters, W.H.M., Herrero, R., Cadoni, G., Bueno-De-Mesquita, H.B., Steffen, A., Agudo, A., Shangina, O., Xiao, X., Gaborieau, V., Chabrier, A., Anantharaman, D., Boffetta, P., Amos, C.I., McKay, J.D., and Brennan, P.
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Male ,0301 basic medicine ,Epidemiology ,Genome-wide association study ,Gastroenterology ,Genome-wide association studies ,INCIDÊNCIA ,HLA Antigens ,Genetics research ,Aged ,Case-Control Studies ,Female ,Genetic Markers ,Genetic Variation ,Haplotypes ,Humans ,Middle Aged ,Mouth ,Mouth Neoplasms ,Papillomaviridae ,Papillomavirus Infections ,Pharyngeal Neoplasms ,Genetic Predisposition to Disease ,Genome-Wide Association Study ,Genetics ,Oral cancer ,genetic research ,3. Good health ,Settore MED/31 - OTORINOLARINGOIATRIA ,medicine.medical_specialty ,Papillomaviruses ,Genome-wide - oral cavity and pharyngeal cancer ,Human leukocyte antigen ,Biology ,Article ,03 medical and health sciences ,Internal medicine ,medicine ,Allele ,Papil·lomavirus ,Haplotype ,Case-control study ,Odds ratio ,oral cancer ,medicine.disease ,Càncer de boca ,030104 developmental biology ,Nasopharyngeal carcinoma ,Immunology ,Imputation (genetics) - Abstract
We conducted a genome-wide association study of oral cavity and pharyngeal cancer in 6,034 cases and 6,585 controls from Europe, North America and South America. We detected eight significantly associated loci (P < 5 × 10(-8)), seven of which are new for these cancer sites. Oral and pharyngeal cancers combined were associated with loci at 6p21.32 (rs3828805, HLA-DQB1), 10q26.13 (rs201982221, LHPP) and 11p15.4 (rs1453414, OR52N2-TRIM5). Oral cancer was associated with two new regions, 2p23.3 (rs6547741, GPN1) and 9q34.12 (rs928674, LAMC3), and with known cancer-related loci-9p21.3 (rs8181047, CDKN2B-AS1) and 5p15.33 (rs10462706, CLPTM1L). Oropharyngeal cancer associations were limited to the human leukocyte antigen (HLA) region, and classical HLA allele imputation showed a protective association with the class II haplotype HLA-DRB1*1301-HLA-DQA1*0103-HLA-DQB1*0603 (odds ratio (OR) = 0.59, P = 2.7 × 10(-9)). Stratified analyses on a subgroup of oropharyngeal cases with information available on human papillomavirus (HPV) status indicated that this association was considerably stronger in HPV-positive (OR = 0.23, P = 1.6 × 10(-6)) than in HPV-negative (OR = 0.75, P = 0.16) cancers. Genotyping performed at the Center for Inherited Disease Research (CIDR) was funded through the U.S. National Institute of Dental and Craniofacial Research (NIDCR) grant 1X01HG007780-0. Genotyping for shared controls with the Lung OncoArray initiative was funded through the grant X01HG007492-0. Corina Lesseur undertook this work during the tenure of a Postdoctoral Fellowship awarded by the International Agency for Research on Cancer. The funders did not participate in the study design, data collection and analysis, decision to publish, or preparation of the manuscript. We acknowledge all of the participants involved in this research and the funders and support. We thank Dr. Leticia Fernandez (Instituto Nacional de Oncologia y Radiobiologia, La Habana, Cuba) for her contribution to the IARC ORC multicenter study. We are also grateful to Sergio Koifman (Escola Nacional de Saúde Pública, Rio de Janeiro, Brazil) for his contribution to the IARC Latin America multicenter study (Sergio Koifman passed away in May 2014) and to Xavier Castellsagué from the ARCAGE Barcelona Center who recently passed away (June 2016). The University of Pittsburgh head and neck cancer case-control study is supported by National Institutes of Health grants P50 CA097190 and P30 CA047904. The Carolina Head and Neck Cancer Study (CHANCE) was supported by the National Cancer Institute (R01-CA90731). The Head and Neck Genome Project (GENCAPO) was supported by the Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) (Grant numbers 04/12054-9 and 10/51168-0). The authors thank all the members of the GENCAPO team. The HN5000 study was funded by the National Institute for Health Research (NIHR) under its Programme Grants for Applied Research scheme (RP-PG-0707-10034), the views expressed in this publication are those of the author(s) and not necessarily those of the NHS, the NIHR or the Department of Health. The Toronto study was funded by the Canadian Cancer Society Research Institute (020214) and the National Cancer Institute (U19 CA148127) and the Cancer Care Ontario Research Chair. The alcohol-related cancers and genetic susceptibility study in Europe (ARCAGE) was funded by the European Commission’s 5th Framework Program (QLK1-2001-00182), the Italian Association for Cancer Research, Compagnia di San Paolo/FIRMS, Region Piemonte, and Padova University (CPDA057222).The Rome Study was supported by the Associazione Italiana per la Ricerca sul Cancro (AIRC) IG 2011 10491 and IG2013 14220 to SB, and Fondazione Veronesi to SB. The IARC Latin American study was funded by the European Commission INCO-DC programme (IC18-CT97-0222), with additional funding from Fondo para la Investigacion Cientifica y Tecnologica (Argentina) and the Fundação de Amparo à Pesquisa do Estado de São Paulo (01/01768-2). The IARC Central Europe study was supported by European Commission’s INCO-COPERNICUS Program (IC15-CT98-0332), NIH/National Cancer Institute grant CA92039, and the World Cancer Research Foundation grant WCRF 99A28.The IARC Oral Cancer Multicenter study was funded by: grant S06 96 202489 05F02 from Europe against Cancer; Grants FIS 97/0024, FIS 97/0662, and BAE 01/5013 from Fondo de Investigaciones Sanitarias, Spain; UICC Yamagiwa-Yoshida Memorial International Cancer Study; National Cancer Institute of Canada; Italian Association for Research on Cancer; and the Pan American Health Organization. The coordination of EPIC study is financially supported
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- 2016
46. Low frequency of cigarette smoking and the risk of head and neck cancer in the INHANCE consortium pooled analysis
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Berthiller, Julien, Straif, Kurt, Agudo, Antonio, Ahrens, Wolfgang, Bezerra Dos Santos, Alexandre, Boccia, Stefania, Cadoni, Gabriella, Canova, Cristina, Castellsague, Xavier, Chen, Chu, Conway, David, Curado, Maria Paula, Dal Maso, Luigino, Daudt, Alexander W, Fabianova, Eleonora, Fernandez, Leticia, Franceschi, Silvia, Fukuyama, Erica E, Hayes, Richard B, Healy, Claire, Herrero, Rolando, Holcatova, Ivana, Kelsey, Karl, Kjaerheim, Kristina, Koifman, Sergio, Lagiou, Pagona, La Vecchia, Carlo, Lazarus, Philip, Levi, Fabio, Lissowska, Jolanta, Macfarlane, Tatiana, Mates, Dana, McClean, Michael, Menezes, Ana, Merletti, Franco, Morgenstern, Hal, Muscat, Joshua, Olshan, Andrew F, Purdue, Mark, Ramroth, Heribert, Rudnai, Peter, Schwartz, Stephen M, Serraino, Diego, Shangina, Oxana, Smith, Elaine, Sturgis, Erich M, Szeszenia-Dabrowska, Neonila, Thomson, Peter, Vaughan, Thomas L, Vilensky, Marta, Wei, Qingyi, Winn, Deborah M, Wünsch-Filho, Victor, Zhang, Zuo-Feng, Znaor, Ariana, Ferro, Gilles, Brennan, Paul, Boffetta, Paolo, Hashibe, Mia, Lee, Yuan-Chin Amy, International Prevention Research Institute (IPRI), The Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai [New York] (MSSM), and Berthiller, J. and Straif, K. and Agudo, A. and Ahrens, W. and Bezerra Dos Santos, A. and Boccia, S. and Cadoni, G. and Canova, C. and Castellsague, X. and Chen, C. and Conway, D. and Curado, M.P. and Dal Maso, L. and Daudt, A.W. and Fabianova, E. and Fernandez, L. and Franceschi, S. and Fukuyama, E.E. and Hayes, R.B. and Healy, C. and Herrero, R. and Holcatova, I. and Kelsey, K. and Kjaerheim, K. and Koifman, S. and Lagiou, P. and La Vecchia, C. and Lazarus, P. and Levi, F. and Lissowska, J. and Macfarlane, T. and Mates, D. and McClean, M. and Menezes, A. and Merletti, F. and Morgenstern, H. and Muscat, J. and Olshan, A.F. and Purdue, M. and Ramroth, H. and Rudnai, P. and Schwartz, S.M. and Serraino, D. and Shangina, O. and Smith, E. and Sturgis, E.M. and Szeszenia-Dabrowska, N. and Thomson, P. and Vaughan, T.L. and Vilensky, M. and Wei, Q. and Winn, D.M. and Wünsch-Filho, V. and Zhang, Z.-F. and Znaor, A. and Ferro, G. and Brennan, P. and Boffetta, P. and Hashibe, M. and Lee, Y.-C.A.
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Male ,Gerontology ,FATORES DE RISCO ,Epidemiology ,Head and neck cancer ,low frequency cigarette smoking ,pooled analysis ,risk factors ,Substance Misuse ,0302 clinical medicine ,Risk Factors ,Odds Ratio ,Medicine ,pooled analysi ,Pooled data ,European commission ,030212 general & internal medicine ,Smoking and Cancer ,Cancer ,Head and Neck Neoplasm ,Statistics ,drinking behavior ,General Medicine ,Middle Aged ,statistical model, Adult ,Head and neck cancer low frequency cigarette smoking pooled analysis risk factors ,3. Good health ,Pooled analysis ,Head and Neck Neoplasms ,030220 oncology & carcinogenesis ,Respiratory ,Public Health and Health Services ,Female ,Christian ministry ,Public Health ,Settore MED/31 - OTORINOLARINGOIATRIA ,Case-Control Studie ,Adult ,Logistic Model ,Alcohol Drinking ,European community ,Library science ,smoking ,Cigarette Smoking ,03 medical and health sciences ,Rare Diseases ,Cigarette smoking ,Clinical Research ,Tobacco ,Humans ,human ,Frame work ,Dental/Oral and Craniofacial Disease ,Settore MED/42 - IGIENE GENERALE E APPLICATA ,Aged ,head and neck tumor ,Tobacco Smoke and Health ,business.industry ,Risk Factor ,Prevention ,case control study ,Logistic Models ,Good Health and Well Being ,Multicenter study ,Case-Control Studies ,head and neck cancer ,[SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie ,business - Abstract
Funding • The pooled data coordination team (PBoffetta, MH, YCAL) were supported by National Cancer Institute grant R03CA113157 and by National Institute of Dental and Craniofacial Research grant R03DE016611 • The Milan study (CLV) was supported by the Italian Association for Research on Cancer (Grant no. 10068). • The Aviano study (LDM) was supported by a grant from the Italian Association for Research on Cancer (AIRC), Italian League Against Cancer and Italian Ministry of Research • The Italy Multicenter study (DS) was supported by the Italian Association for Research on Cancer (AIRC), Italian League Against Cancer and Italian Ministry of Research. • The Study from Switzerland (FL) was supported by the Swiss League against Cancer and the Swiss Research against Cancer/Oncosuisse [KFS-700, OCS-1633]. • The central Europe study (PBoffetta, PBrenan, EF, JL, DM, PR, OS, NS-D) was supported by the World Cancer Research Fund and the European Commission INCO-COPERNICUS Program [Contract No. IC15- CT98-0332] • The New York multicentre study (JM) was supported by a grant from National Institute of Health [P01CA068384 K07CA104231]. • The study from the Fred Hutchison Cancer Research Center from Seattle (CC, SMS) was supported by a National Institute of Health grant [R01CA048996, R01DE012609]. • The Iowa study (ES) was supported by National Institute of Health [NIDCR R01DE011979, NIDCR R01DE013110, FIRCA TW001500] and Veterans Affairs Merit Review Funds. • The North Carolina studies (AFO) were supported by National Institute of Health [R01CA061188], and in part by a grant from the National Institute of Environmental Health Sciences [P30ES010126]. • The Tampa study (PLazarus, JM) was supported by National Institute of Health grants [P01CA068384, K07CA104231, R01DE013158] • The Los Angeles study (Z-F Z, HM) was supported by grants from National Institute of Health [P50CA090388, R01DA011386, R03CA077954, T32CA009142, U01CA096134, R21ES011667] and the Alper Research Program for Environmental Genomics of the UCLA Jonsson Comprehensive Cancer Center. • The Houston study (EMS, GL) was supported by a grant from National Institute of Health [R01ES011740, R01CA100264]. • The Puerto Rico study (RBH, MPP) was supported by a grant from National Institutes of Health (NCI) US and NIDCR intramural programs. • The Latin America study (PBoffetta, PBrenan, MV, LF, MPC, AM, AWD, SK, VW-F) was supported by Fondo para la Investigacion Cientifica y Tecnologica (FONCYT) Argentina, IMIM (Barcelona), Fundaco de Amparo a‘ Pesquisa no Estado de Sao Paulo (FAPESP) [No 01/01768-2], and European Commission [IC18-CT97-0222] • The IARC multicentre study (SF, RH, XC) was supported by Fondo de Investigaciones Sanitarias (FIS) of the Spanish Government [FIS 97/ 0024, FIS 97/0662, BAE 01/5013], International Union Against Cancer (UICC), and Yamagiwa-Yoshida Memorial International Cancer Study Grant. • The Boston study (KKelsey, MMcC) was supported by a grant from National Institute of Health [R01CA078609, R01CA100679]. • The Rome study (SB, GC) was supported by AIRC (Italian Agency for Research on Cancer). • The US multicentre study (BW) was supported by The Intramural Program of the National Cancer Institute, National Institute of Health, United States. • The Sao Paolo study (V W-F) was supported by Fundacao de Ampara a Pesquisa no Estado de Sao Paulo (FAPESP No 10/51168-0) • The MSKCC study (SS, G-P Y) was supported by a grant from National Institute of Health [R01CA051845]. • The Seattle-Leo stud (FV) was supported by a grant from National Institute of Health [R01CA030022] • The western Europe Study (PBoffetta, IH, WA, PLagiou, DS, LS, FM, CH, KKjaerheim, DC, TMc, PT, AA, AZ) was supported by European Community (5th Frame work Programme) grant no QLK1-CT-2001- 00182. • The Germany Heidelberg study (HR) was supported by the grant No. 01GB9702/3 from the German Ministry of Education and Research.
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- 2016
47. The role of oral hygiene in head and neck cancer: results from International Head and Neck Cancer Epidemiology (INHANCE) consortium
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Chu Chen, Kimon Divaris, Silvia Franceschi, Hal Morgenstern, Jolanta Lissowska, Paul Brennan, Jonathan N. Hofmann, Yuan Chin Amy Lee, Victor Wünsch-Filho, Mia Hashibe, Deborah M. Winn, C. La Vecchia, Samantha Sartori, Gypsyamber D'Souza, Andrew F. Olshan, Maria Paula Curado, Paolo Boffetta, Jose P. Zevallos, Peter Rudnai, Keitaro Matsuo, H. Wu, Dana Hashim, Thomas L. Vaughan, Xavier Castellsagué, Robert I. Haddad, Hashim, D., Sartori, S., Brennan, P., Curado, M.P., Wünsch-Filho, V., Divaris, K., Olshan, A.F., Zevallos, J.P., Winn, D.M., Franceschi, S., Castellsagué, X., Lissowska, J., Rudnai, P., Matsuo, K., Morgenstern, H., Chen, C., Vaughan, T.L., Hofmann, J.N., D'Souza, G., Haddad, R.I., Wu, H., Lee, Y.-C., Hashibe, M., La Vecchia, C., and Boffetta, P.
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Adult ,Male ,Alcohol Drinking ,medicine.medical_treatment ,media_common.quotation_subject ,Population ,Dentistry ,Oral hygiene ,Oral hygiene in head and neck cancer ,Tooth brushing ,03 medical and health sciences ,0302 clinical medicine ,Hygiene ,Risk Factors ,Tooth loss ,medicine ,Humans ,education ,media_common ,Aged ,Mouth neoplasm ,education.field_of_study ,business.industry ,Smoking ,030206 dentistry ,Hematology ,Odds ratio ,Original Articles ,Middle Aged ,Oral Hygiene ,stomatognathic diseases ,Logistic Models ,Oncology ,Head and Neck Neoplasms ,030220 oncology & carcinogenesis ,Female ,Mouth Neoplasms ,medicine.symptom ,Dentures ,business - Abstract
Background: Poor oral hygiene has been proposed to contribute to head and neck cancer (HNC) risk, although causality and independency of some indicators are uncertain. This study investigates the relationship of five oral hygiene indicators with incident HNCs. Methods: In a pooled analysis of 8925 HNC cases and 12 527 controls from 13 studies participating in the International Head and Neck Cancer Epidemiology Consortium, comparable data on good oral hygiene indicators were harmonized. These included: No denture wear, no gum disease (or bleeding)
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- 2016
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48. Alcohol and tobacco, and the risk of cancers of the upper aerodigestive tract in Latin America: a case–control study
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José Eluf-Neto, Elena Matos, Paul Brennan, Sergio Koifman, V. Wünsch-Filho, Rayjean Hung, Maria Paula Curado, Paolo Boffetta, Katarzyna Szymańska, Leticia Fernandez, Ana M. B. Menezes, Alexander W. Daudt, Szymanska, K., Hung, R.J., Wünsch-Filho, V., Eluf-Neto, J., Curado, M.P., Koifman, S., Matos, E., Menezes, A., Fernandez, L., Daudt, A.W., Boffetta, P., and Brennan, P.
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Adult ,Male ,Larynx ,Cancer Research ,medicine.medical_specialty ,Latin Americans ,Alcohol Drinking ,Alcohol ,chemistry.chemical_compound ,Risk Factors ,Tobacco ,Epidemiology ,medicine ,cancer ,Humans ,risk ,Aged ,Aged, 80 and over ,Ethanol ,business.industry ,Public health ,Carcinoma ,Smoking ,Pharynx ,Case-control study ,Cancer ,upper ,Middle Aged ,aerodigestive ,medicine.disease ,tract ,Surgery ,Latin America ,medicine.anatomical_structure ,Oncology ,chemistry ,Head and Neck Neoplasms ,Case-Control Studies ,Female ,business ,Demography - Abstract
Background: Cancers of the upper aerodigestive tract (UADT; including oral cavity, pharynx, larynx and oesophagus) have high incidence rates all over the world, and they are especially frequent in some parts of Latin America. However, the data on the role of the major risk factors in these areas are still limited. Methods: We have evaluated the role of alcohol and tobacco consumption, based on 2,252 upper aerodigestive squamous-cell carcinoma cases and 1,707 controls from seven centres in Brazil, Argentina, and Cuba. Results: We show that alcohol drinkers have a risk of UADT cancers that is up to five times higher than that of never-drinkers. A very strong effect of aperitifs and spirits as compared to other alcohol types was observed, with the ORs reaching 12.76 (CI 5.37-30.32) for oesophagus. Tobacco smokers were up to six times more likely to develop aerodigestive cancers than never-smokers, with the ORs reaching 11.14 (7.72-16.08) among current smokers for hypopharynx and larynx cancer. There was a trend for a decrease in risk after quitting alcohol drinking or tobacco smoking for all sites. The interactive effect of alcohol and tobacco was more than multiplicative. In this study, 65% of all UADT cases were attributable to a combined effect of alcohol and tobacco use. Conclusions: In this largest study on UADT cancer in Latin America, we have shown for the first time that a prevailing majority of UADT cancer cases is due to a combined effect of alcohol and tobacco use and could be prevented by quitting the use of either of these two agents. © 2011 Springer Science+Business Media B.V.
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- 2011
49. Drinking of maté and the risk of cancers of the upper aerodigestive tract in Latin America: a case–control study
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Rayjean J. Hung, Victor Wünsch-Filho, José Eluf-Neto, Alexander W. Daudt, Elena Matos, Ana M. B. Menezes, Katarzyna Szymańska, Paolo Boffetta, Paul Brennan, Szymanska, K., Matos, E., Hung, R.J., Wünsch-Filho, V., Eluf-Neto, J., Menezes, A., Daudt, A.W., Brennan, P., and Boffetta, P.
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Adult ,Male ,Cancer Research ,medicine.medical_specialty ,Esophageal Neoplasms ,Argentina ,Drinking ,Gastroenterology ,Beverages ,Ilex paraguariensis ,Internal medicine ,upper aerodigestive tract ,Epidemiology ,medicine ,Carcinoma ,Humans ,Multicenter Studies as Topic ,Esophagus ,Aged ,Aged, 80 and over ,business.industry ,Head and neck cancer ,Pharynx ,Case-control study ,Cancer ,Middle Aged ,Esophageal cancer ,medicine.disease ,Latin America ,medicine.anatomical_structure ,Oncology ,Drinking of maté ,Head and Neck Neoplasms ,Case-Control Studies ,Carcinoma, Squamous Cell ,Female ,business ,Brazil ,Demography - Abstract
Cancers of the upper aerodigestive tract (UADT: oral cavity, oropharynx, hypopharynx, larynx, esophagus) have high incidence rates all over the world and they are especially frequent in some parts of Latin America. In this study, we have evaluated the role of the consumption of maté, a hot herb-based beverage, based on 1168 UADT squamous-cell carcinoma cases and 1,026 frequency-matched controls enrolled from four centers in Brazil and Argentina. The effect of maté drinking on the risk of head-and-neck cancers was borderline significant. A significant effect was observed only for cancer of the esophagus (OR 3.81 (95% CI 1.75-8.30)). While duration of maté drinking was associated with the risk of all UADT cancers, the association with cumulative maté consumption was restricted to esophageal cancer (p-value of linear trend 0.006). The analyses of temperature at which maté was drunk were not conclusive. The increased risk associated with maté drinking was more evident in never-smokers and never-alcohol drinkers than in other individuals. Our study strengthens the evidence of an association between maté drinking and esophageal cancer; the hypothesis of an association with other UADT cancers remains to be clarified. © 2010 Springer Science+Business Media B.V.
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- 2010
50. TP53 and EGFR mutations in combination with lifestyle risk factors in tumours of the upper aerodigestive tract from South America
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Alexander W. Daudt, Elena Matos, José Eduardo Levi, Ana M. B. Menezes, Stephanie Villar, Michael Pawlita, Victor Wünsch-Filho, Sergio Koifman, Katarzyna Szymańska, Maria Paula Curado, Paolo Boffetta, Paul Brennan, Tim Waterboer, Pierre Hainaut, José Eluf-Neto, Szymanska, K., Levi, J.E., Menezes, A., Wünsch-Filho, V., Eluf-Neto, J., Koifman, S., Matos, E., Daudt, A.W., Curado, M.P., Villar, S., Pawlita, M., Waterboer, T., Boffetta, P., Hainaut, P., and Brennan, P.
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Adult ,Male ,Cancer Research ,medicine.medical_specialty ,Mutation rate ,Esophageal Neoplasms ,Population ,Pilot Projects ,medicine.disease_cause ,Gastroenterology ,Risk Factors ,Internal medicine ,medicine ,Humans ,education ,Life Style ,Aged ,Mutation ,education.field_of_study ,Cocarcinogenesis ,business.industry ,Pharynx ,Case-control study ,Cancer ,General Medicine ,Middle Aged ,South America ,Genes, p53 ,medicine.disease ,ErbB Receptors ,medicine.anatomical_structure ,CpG site ,Head and Neck Neoplasms ,Case-Control Studies ,TP53 EGFR mutations combination lifestyle risk factors tumours upper aerodigestive tract South America ,Female ,business ,Carcinogenesis - Abstract
Cancers of the upper aerodigestive tract [(UADT): oral cavity, pharynx, larynx and oesophagus] have high incidence rates in some parts of South America. Alterations in the TP53 gene are common in these cancers. In our study, we have estimated the prevalence and patterns of TP53 mutations (exons 4-10) in 236 UADT tumours from South America in relation to lifestyle risk factors, such as tobacco smoking and alcohol drinking. Moreover, we have conducted a pilot study of EGFR mutations (exons 18-21) in 45 tumours from the same population. TP53 mutation prevalence was high: 59% of tumours were found to carry mutant TP53. We found an association between TP53 mutations and tobacco smoking and alcohol drinking. The mutation rate increased from 38% in never-smokers to 66% in current smokers (P-value for trend 5 0.09). G:C>T:A transversions were found only in smokers (15%). Alcohol drinkers carried more G:C>A:T transitions (P 5 0.08). Non-exposed individuals were more probable to carry G:C>A:T transitions at CpG sites (P 5 0.01 for neversmokers and P < 0.001 for never-drinkers). EGFR mutations were found in 4% of cases. Inactivation of TP53 by mutations is a crucial molecular event in the UADT carcinogenesis and it is closely related to exposure to lifestyle risk factors. EGFR mutations do not appear to be a common event in UADT carcinogenesis in this population. © The Author 2009. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org.
- Published
- 2009
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