107 results on '"Kap-Sun Yeung"'
Search Results
2. Degradation of Protein Kinases: Ternary Complex, Cooperativity, and Selectivity
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Kap-Sun Yeung and Claire E Grigglestone
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Kinase ,Chemistry ,Organic Chemistry ,Drug Discovery ,Biophysics ,Degradation (geology) ,Cooperativity ,Protein degradation ,Selectivity ,Biochemistry ,Ternary complex - Abstract
[Image: see text] In targeted protein degradation of kinases, key discoveries have been made specifically involving selective kinase degradation. Structural and biophysical studies on the ternary complex formation have provided a clear understanding of the basis for achieving degradation selectivity which is important in guiding the design of efficient and selective protein degraders.
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- 2021
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3. Ligand‐Enabled β‐C(sp 3 )−H Lactamization of Tosyl‐Protected Aliphatic Amides Using a Practical Oxidant
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Zhe Zhuang, Shuang Liu, Jin‐Tang Cheng, Kap‐Sun Yeung, Jennifer X. Qiao, Nicholas A. Meanwell, and Jin‐Quan Yu
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General Medicine ,General Chemistry ,Catalysis - Published
- 2022
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4. A tautomeric ligand enables directed C‒H hydroxylation with molecular oxygen
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Kap-Sun Yeung, William R. Ewing, Jin-Quan Yu, Zhen Li, Shaoqun Qian, Nikita Chekshin, Zhen Wang, Jennifer X. Qiao, and Peter T. W. Cheng
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Models, Molecular ,Denticity ,Pyridines ,Pyridones ,Carboxylic Acids ,Hydroxylation ,Ligands ,Article ,Catalysis ,chemistry.chemical_compound ,Pyridine ,Acids, Heterocyclic ,Multidisciplinary ,Molecular Structure ,Ligand ,Aryl ,Hydrogen Bonding ,Tautomer ,Combinatorial chemistry ,Carbon ,Oxygen ,chemistry ,Catalytic cycle ,Palladium ,Hydrogen - Abstract
Easing oxygen into arenes Although oxygen is all around us, it is often surprisingly difficult to use it for selective chemical oxidations, necessitating more expensive, wasteful alternatives. Li et al. report that careful ligand optimization produces palladium catalysts that can efficiently activate oxygen to hydroxylate a variety of aryl and heteroaromatic rings adjacent to a carboxylic acid substituent. The ligand binds to palladium through pyridine and pyridone components, and the authors posit that tautomerization between dative and anionic coordination modes plays a role in its effectiveness. Science , abg2362, this issue p. 1452
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- 2021
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5. meta ‐Selective C−H Arylation of Fluoroarenes and Simple Arenes
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Jennifer X. Qiao, Jin-Quan Yu, Kap-Sun Yeung, Luo-Yan Liu, and William R. Ewing
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Metalation ,chemistry.chemical_element ,Protonation ,Homogeneous catalysis ,010402 general chemistry ,Ligands ,01 natural sciences ,Medicinal chemistry ,Hydrocarbons, Aromatic ,Catalysis ,Article ,Meta ,chemistry.chemical_compound ,Reactivity (chemistry) ,Norbornene ,Fluorenes ,Molecular Structure ,010405 organic chemistry ,General Chemistry ,General Medicine ,Carbon ,0104 chemical sciences ,chemistry ,Catalytic cycle ,Palladium ,Hydrogen - Abstract
Fluorine is known to promote ortho-C-H metalation. Based upon this reactivity, we employed an activated norbornene that traps the ortho-palladation intermediate and is then relayed to the meta position, leading to meta-selective C-H arylation of fluoroarenes. Deuterium experiment suggests that this meta-arylation is initiated by ortho C-H activation and the catalytic cycle is terminated by C-2 protonation. A dual-ligand system is crucial for the observed high reactivity and site selectivity. Applying this approach to simple benzene or other arenes also affords arylation products with good yield and site selectivity.
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- 2020
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6. Pd II ‐Catalyzed Enantioselective C(sp 3 )–H Arylation of Cyclobutyl Ketones Using a Chiral Transient Directing Group
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Kai Hong, Fan Luo, Liang Hu, Jin-Quan Yu, William R. Ewing, Li‐Jun Xiao, and Kap-Sun Yeung
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010405 organic chemistry ,Chemistry ,Ligand ,Enantioselective synthesis ,Substrate (chemistry) ,chemistry.chemical_element ,General Medicine ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Combinatorial chemistry ,Catalysis ,0104 chemical sciences ,Cyclobutane ,Stereocenter ,chemistry.chemical_compound ,Covalent bond ,Palladium - Abstract
The use of chiral transient directing groups (TDGs) is a promising approach for developing PdII -catalyzed enantioselective C(sp3 )-H activation reactions. However, this strategy is challenging because the stereogenic center on the TDG is often far from the C-H bond, and both TDG covalently attached to the substrate and free TDG are capable of coordinating to PdII centers, which can result in a mixture of reactive complexes. We report a PdII -catalyzed enantioselective β-C(sp3 )-H arylation reaction of aliphatic ketones using a chiral TDG. A chiral trisubstituted cyclobutane was efficiently synthesized from a mono-substituted cyclobutane through sequential C-H arylation reactions, thus demonstrating the utility of this method for accessing structurally complex products from simple starting materials. The use of an electron-deficient pyridone ligand is crucial for the observed enantioselectivity. Interestingly, employing different silver salts can reverse the enantioselectivity.
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- 2020
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7. Ligand Enabled Pd(II)-Catalyzed γ-C(sp(3))─H Lactamization of Native Amides
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Shuang Liu, Zhe Zhuang, Jennifer X. Qiao, Kap-Sun Yeung, Shun Su, Emily C. Cherney, Zheming Ruan, William R. Ewing, Michael A. Poss, and Jin-Quan Yu
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Colloid and Surface Chemistry ,Lactams ,Molecular Structure ,General Chemistry ,Biochemistry ,Amides ,Article ,Catalysis ,Palladium - Abstract
γ-Lactams form important structural cores of a range of medicinally-relevant natural products and clinical drugs, principal examples being the new generation of immunomodulatory imide drugs (IMiDs) and the brivaracetam family. Compared to conventional multistep synthesis, an intramolecular γ-C─H amination of aliphatic amides would allow for the direct construction of valuable γ-lactam motifs from abundant amino acid precursors. Herein we report a novel pyridone ligand enabled Pd(II)-catalyzed γ-C(sp(3))─H lactamization of amino acid derived native amides, providing the convenient synthesis of γ-lactams, isoindolinones, and 2-imidazolidinones. 6-Substitution of the 2-pyridone ligand is crucial for the lactam formation. This protocol features the use of N-acyl amino acids, which serve as both the directing group and cyclization partner, practical and environmentally benign tert-butyl hydrogen peroxide (TBHP) as the sole bystanding oxidant, and a broad substrate scope. The utility of this protocol was demonstrated through the two-step syntheses of a lenalidomide analog and brivaracetam from readily available carboxylic acids and amino acids.
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- 2021
8. β ‐Selective C−H Arylation of Electron‐Deficient Thiophenes, Pyrroles, and Furans
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Jin-Quan Yu, Kap-Sun Yeung, Jennifer X. Qiao, William R. Ewing, and Luo-Yan Liu
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chemistry.chemical_compound ,chemistry ,Furan ,Thiophene ,chemistry.chemical_element ,General Chemistry ,Electron ,Medicinal chemistry ,Pyrrole ,Palladium - Published
- 2020
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9. meta C–H Arylation of Electron-Rich Arenes: Reversing the Conventional Site Selectivity
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Jin-Quan Yu, Luo-Yan Liu, Jennifer X. Qiao, Kap-Sun Yeung, and William R. Ewing
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Ligand ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Combinatorial chemistry ,Article ,Catalysis ,0104 chemical sciences ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,chemistry ,Alkoxy group ,Electronic effect ,Chromane ,Reversing ,Selectivity ,Norbornene - Abstract
Controlling site selectivity of C–H activation without using a directing group remains a significant challenge. While Pd(II) catalysts modulated by a mutually repulsive pyridine-type ligand have been shown to favor the relatively electron-rich carbon centers of arenes, reversing the selectivity to favor palladation at the relatively electron-deficient positions has not been possible. Herein we report the first catalytic system that effectively performs meta C–H arylation of a variety of alkoxy aromatics including 2,3-dihydrobenzofuran and chromane with exclusive meta site selectivity, thus reversing the conventional site selectivity governed by native electronic effects. The identification of an effective ligand and modified norbornene (NBE-CO(2)Me), as well as taking advantage of the statistics, are essential for achieving the exclusive meta selectivity.
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- 2019
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10. Ligand-Promoted Non-Directed C−H Cyanation of Arenes
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Kap-Sun Yeung, Jin-Quan Yu, and Luo-Yan Liu
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Limiting reagent ,010405 organic chemistry ,Chemistry ,Ligand ,Organic Chemistry ,General Chemistry ,Cyanation ,010402 general chemistry ,01 natural sciences ,Combinatorial chemistry ,Article ,Catalysis ,0104 chemical sciences ,Molecule ,Bond cleavage - Abstract
We herein report the first example of a 2-pyridone accelerated non-directed C–H cyanation with an arene as the limiting reagent. This protocol is compatible with a broad scope of arenes, including advanced intermediates, drug molecules, and natural products. A kinetic isotope experiment (k(H)/k(D) = 4.40) indicates that the C–H bond cleavage is the rate-limiting step. Also, the reaction is readily scalable, further showcasing the synthetic utility of this method.
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- 2019
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11. Pd
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Li-Jun, Xiao, Kai, Hong, Fan, Luo, Liang, Hu, William R, Ewing, Kap-Sun, Yeung, and Jin-Quan, Yu
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Electron Transport ,Benzene ,Stereoisomerism ,Ketones ,Catalysis ,Cyclobutanes ,Palladium ,Article - Abstract
The utilization of chiral transient directing groups (TDGs) has recently emerged as a promising approach for developing Pd(II)-catalyzed enantioselective C(sp(3))−H activation reactions. However, this strategy is particularly challenging because the stereogenic center present on the TDG is often far from the C–H bond. Additionally, the TDG covalently attached to the substrate and the free TDG are both capable of coordinating to Pd(II) centers, which can result in a mixture of reactive complexes that may lead to opposite asymmetric induction. To date, the single example of TDG-enabled enantioselective C(sp(3))−H activation is limited to the functionalization of benzylic C–H bonds. Herein we report the first example of a Pd(II)-catalyzed enantioselective β-C(sp(3))−H arylation reaction of aliphatic ketones using a chiral transient directing group. A chiral trisubstituted cyclobutane is efficiently synthesized from a mono-substituted cyclobutane via sequential C–H arylation reactions, demonstrating the ability of this method to access structurally complex products from simple starting materials. The use of an electron-deficient pyridone ligand is also crucial for the observed high enantioselectivity. Interestingly, employing different silver salts can reverse the enantioselectivity in the C(sp(3))−H arylation reaction. These key mechanistic findings will provide insight for future development of Pd(II)-catalyzed enantioselective C(sp(3))−H activation reactions with chiral TDGs.
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- 2020
12. A General Amino Acid Synthesis Enabled by Innate Radical Cross-Coupling
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Phil S. Baran, Tian Qin, Justine N. de Gruyter, Michael R. Collins, Kap Sun Yeung, Shengyang Ni, Gary M. Gallego, David R. Langley, Jennifer X. Qiao, Paul Michael Scola, James J. Mousseau, Daniel C. Schmitt, Michael A. Poss, Rohan R. Merchant, Shouliang Yang, and Alberto F. Garrido-Castro
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chemistry.chemical_classification ,Primary (chemistry) ,Free Radicals ,Chemistry ,010405 organic chemistry ,Stereoisomerism ,General Chemistry ,General Medicine ,010402 general chemistry ,Combinatorial chemistry ,01 natural sciences ,Catalysis ,Article ,0104 chemical sciences ,Coupling (computer programming) ,Rapid access ,Amino Acids ,Amino acid synthesis - Abstract
The direct union of primary, secondary, and tertiary carboxylic acids with a chiral glyoxylate-derived sulfinimine provides rapid access into a variety of enantiomerically pure α-amino acids (>85 examples). Characterized by operational simplicity, this radical-based reaction enables the modular assembly of exotic α-amino acids, including both unprecedented structures and those of established industrial value. The described method performs well in high-throughput library synthesis, and has already been implemented in three distinct medicinal chemistry campaigns.
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- 2018
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13. Bioactivation of cyclopropyl rings by P450: an observation encountered during the optimisation of a series of hepatitis C virus NS5B inhibitors
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Xiaohua Stella Huang, Kyle J. Eastman, Kyle Parcella, Benjamin M. Johnson, John F. Kadow, Xiaoliang Zhuo, Juliang Zhu, Yue-Zhong Shu, Nicholas A. Meanwell, Kap-Sun Yeung, and Yingzi Wang
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0301 basic medicine ,Stereochemistry ,Health, Toxicology and Mutagenesis ,Hepacivirus ,Viral Nonstructural Proteins ,Toxicology ,Ring (chemistry) ,Hydrogen atom abstraction ,Antiviral Agents ,030226 pharmacology & pharmacy ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Cytochrome P-450 Enzyme System ,Animals ,Humans ,Moiety ,Benzofuran ,NS5B ,Pharmacology ,Drug discovery ,General Medicine ,Glutathione ,Rats ,030104 developmental biology ,chemistry ,Benzamides ,Conjugate - Abstract
1. Due to its unique C-C and C-H bonding properties, conformational preferences and relative hydrophilicity, the cyclopropyl ring has been used as a synthetic building block in drug discovery to modulate potency and drug-like properties. During an effort to discover inhibitors of the hepatitis C virus non-structural protein 5B with improved potency and genotype-coverage profiles, the use of a pyrimidinylcyclopropylbenzamide moiety linked to a C6-substituted benzofuran or azabenzofuran core scaffold was explored in an effort to balance antiviral potency and metabolic stability. 2. In vitro metabolism studies of two compounds from this C6-substituted series revealed an NADPH-dependent bioactivation pathway leading to the formation of multiple glutathione (GSH) conjugates. Analysis of these conjugates by LC-MS and NMR demonstrated that the cyclopropyl group was the site of bioactivation. Based on the putative structures and molecular weights of the cyclopropyl-GSH conjugates, a multi-step mechanism was proposed to explain the formation of these metabolites by P450. This mechanism involves hydrogen atom abstraction to form a cyclopropyl radical, followed by a ring opening rearrangement and reaction with GSH. 3. These findings provided important information to the medicinal chemistry team which responded by replacing the cyclopropyl ring with a gem-dimethyl group. Subsequent compounds bearing this feature were shown to avert the bioactivation pathways in question.
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- 2017
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14. Ligand-accelerated non-directed C–H functionalization of arenes
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Shiwei Tao, Marcus E. Farmer, Michael A. Poss, Jennifer X. Qiao, Kap-Sun Yeung, Jin-Quan Yu, Guoqin Xia, Peng Wang, Jun Shi, Peter T. W. Cheng, and Pritha Verma
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inorganic chemicals ,Steric effects ,Pyridones ,chemistry.chemical_element ,Alkenes ,Ligands ,010402 general chemistry ,Hydrocarbons, Aromatic ,01 natural sciences ,Catalysis ,Article ,Electronic effect ,Molecule ,Organic chemistry ,Reactivity (chemistry) ,Biological Products ,Multidisciplinary ,010405 organic chemistry ,Chemistry ,Ligand ,Combinatorial chemistry ,Carbon ,0104 chemical sciences ,Pharmaceutical Preparations ,Selectivity ,Palladium ,Hydrogen - Abstract
The directed activation of carbon-hydrogen bonds (C-H) is important in the development of synthetically useful reactions, owing to the proximity-induced reactivity and selectivity that is enabled by coordinating functional groups. Palladium-catalysed non-directed C-H activation could potentially enable further useful reactions, because it can reach more distant sites and be applied to substrates that do not contain appropriate directing groups; however, its development has faced substantial challenges associated with the lack of sufficiently active palladium catalysts. Currently used palladium catalysts are reactive only with electron-rich arenes, unless an excess of arene is used, which limits synthetic applications. Here we report a 2-pyridone ligand that binds to palladium and accelerates non-directed C-H functionalization with arene as the limiting reagent. This protocol is compatible with a broad range of aromatic substrates and we demonstrate direct functionalization of advanced synthetic intermediates, drug molecules and natural products that cannot be used in excessive quantities. We also developed C-H olefination and carboxylation protocols, demonstrating the applicability of our methodology to other transformations. The site selectivity in these transformations is governed by a combination of steric and electronic effects, with the pyridone ligand enhancing the influence of sterics on the selectivity, thus providing complementary selectivity to directed C-H functionalization.
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- 2017
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15. Improving Metabolic Stability with Deuterium: The Discovery of BMT-052, a Pan-genotypic HCV NS5B Polymerase Inhibitor
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Dawn D. Parker, Karen Rigat, Kyle J. Eastman, Umesh Hanumegowda, Katharine A. Grant-Young, Nicholas A. Meanwell, Maria Tuttle, Tao Wang, Tatyana Zvyaga, Susan B. Roberts, Hua Fang, Kap-Sun Yeung, Mengping Liu, Julie A. Lemm, Kathy Mosure, Xiaoliang Zhuo, Maria Donoso, Kyle Parcella, Zhongxing Zhang, Matthew G. Soars, Zuzana Haarhoff, Zhiwei Yin, Ying-Kai Wang, John F. Kadow, and Juliang Zhu
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0301 basic medicine ,010405 organic chemistry ,Hepatitis C virus ,Organic Chemistry ,Metabolic stability ,Biology ,medicine.disease_cause ,01 natural sciences ,Biochemistry ,Virology ,Ns5b polymerase ,0104 chemical sciences ,03 medical and health sciences ,030104 developmental biology ,Drug Discovery ,Genotype ,medicine ,Primer (molecular biology) - Abstract
Iterative structure–activity analyses in a class of highly functionalized furo[2,3-b]pyridines led to the identification of the second generation pan-genotypic hepatitis C virus NS5B polymerase primer grip inhibitor BMT-052 (14), a potential clinical candidate. The key challenge of poor metabolic stability was overcome by strategic incorporation of deuterium at potential metabolic soft spots. The preclinical profile and status of BMT-052 (14) is described.
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- 2017
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16. Discovery of a Hepatitis C Virus NS5B Replicase Palm Site Allosteric Inhibitor (BMS-929075) Advanced to Phase 1 Clinical Studies
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Katherine A. Grant-Young, Andrew Nickel, Rajesh Onkardas Bora, Prakash Anjanappa, Bender John A, Kevin Kish, Kap-Sun Yeung, Dawn D. Parker, Joseph Raybon, Mark R. Witmer, Karen Rigat, Matthew G. Soars, Steven Sheriff, Yue-Zhong Shu, Kenneth S. Santone, Prashantha Gunaga, Kyle Parcella, Nicholas A. Meanwell, Jay O. Knipe, Susan B. Roberts, Alicia Ng, Michael Sinz, Kathy Mosure, Ying-Kai Wang, Brett R. Beno, Mengping Liu, Elizabeth Colston, Dennis M. Grasela, John F. Kadow, Qi Gao, Min Gao, Umesh Hanumegowda, Roy Haskell, Julie A. Lemm, Xiaoliang Zhuo, Changhong Wan, and Kumaravel Selvakumar
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Male ,0301 basic medicine ,Hepatitis C virus ,Allosteric regulation ,RNA-dependent RNA polymerase ,Hepacivirus ,Viral Nonstructural Proteins ,medicine.disease_cause ,Antiviral Agents ,01 natural sciences ,Rats, Sprague-Dawley ,03 medical and health sciences ,chemistry.chemical_compound ,Dogs ,Allosteric Regulation ,Drug Discovery ,medicine ,Animals ,Humans ,Benzofuran ,NS5B ,Benzofurans ,Ligand efficiency ,010405 organic chemistry ,Chemistry ,Drug discovery ,Haplorhini ,Hepatitis C ,Rats ,0104 chemical sciences ,Molecular Docking Simulation ,030104 developmental biology ,Biochemistry ,Benzothiadiazine ,Molecular Medicine ,Allosteric Site - Abstract
The hepatitis C virus (HCV) NS5B replicase is a prime target for the development of direct-acting antiviral drugs for the treatment of chronic HCV infection. Inspired by the overlay of bound structures of three structurally distinct NS5B palm site allosteric inhibitors, the high-throughput screening hit anthranilic acid 4, the known benzofuran analogue 5, and the benzothiadiazine derivative 6, an optimization process utilizing the simple benzofuran template 7 as a starting point for a fragment growing approach was pursued. A delicate balance of molecular properties achieved via disciplined lipophilicity changes was essential to achieve both high affinity binding and a stringent targeted absorption, distribution, metabolism, and excretion profile. These efforts led to the discovery of BMS-929075 (37), which maintained ligand efficiency relative to early leads, demonstrated efficacy in a triple combination regimen in HCV replicon cells, and exhibited consistently high oral bioavailability and pharmacokinetic parameters across preclinical animal species. The human PK properties from the Phase I clinical studies of 37 were better than anticipated and suggest promising potential for QD administration.
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- 2017
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17. Diverse ortho-C(sp2)–H Functionalization of Benzaldehydes Using Transient Directing Groups
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Qun-Liang Zhang, Jin-Quan Yu, Kap-Sun Yeung, Fang-Lin Zhang, Xi-Hai Liu, Bing Sun, Hojoon Park, Jun-Hao Hu, Bao-Long Wang, and Yan Hu
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010405 organic chemistry ,Group strategy ,Imine ,Multiple applications ,Halogenation ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Combinatorial chemistry ,Catalyst poisoning ,Catalysis ,0104 chemical sciences ,Benzaldehyde ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,chemistry ,Organic chemistry ,Surface modification - Abstract
Pd-catalyzed C–H functionalizations promoted by transient directing groups remain largely limited to C–H arylation only. Herein, we report a diverse set of ortho-C(sp2)–H functionalizations of benzaldehyde substrates using the transient directing group strategy. Without installing any auxiliary directing group, Pd(II)-catalyzed C–H arylation, chlorination, bromination, and Ir(III)-catalyzed amidation, could be achieved on benzaldehyde substrates. The transient directing groups formed in situ via imine linkage can override other coordinating functional groups capable of directing C–H activation or catalyst poisoning, significantly expanding the scope for metal-catalyzed C–H functionalization of benzaldehydes. The utility of this approach is demonstrated through multiple applications, including late-stage diversification of a drug analogue.
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- 2017
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18. Rational Development of Remote C-H Functionalization of Biphenyl: Experimental and Computational Studies
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Zhoulong Fan, Xiangyang Chen, Han Seul Park, Katherine L. Bay, Kendall N. Houk, Jin-Quan Yu, Kap-Sun Yeung, and Zhe Zhuang
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Nitrile ,010402 general chemistry ,Cleavage (embryo) ,01 natural sciences ,pyridone ,Catalysis ,C−H activation ,Article ,chemistry.chemical_compound ,C-H activation ,biphenyl ,Density Functional Theory ,Biphenyl ,Molecular Structure ,010405 organic chemistry ,Organic Chemistry ,Biphenyl Compounds ,Halogenation ,General Chemistry ,General Medicine ,Combinatorial chemistry ,0104 chemical sciences ,chemistry ,Functional group ,Chemical Sciences ,synthetic methods ,Surface modification ,Pd-Ag dimers ,Cyclophane - Abstract
A simple and efficient nitrile-directed meta-C-H olefination, acetoxylation, and iodination of biaryl compounds is reported. Compared to the previous approach of installing a complex U-shaped template to achieve a molecular U-turn and assemble the large-sized cyclophane transition state for the remote C-H activation, a synthetically useful phenyl nitrile functional group could also direct remote meta-C-H activation. This reaction provides a useful method for the modification of biaryl compounds because the nitrile group can be readily converted to amines, acids, amides, or other heterocycles. Notably, the remote meta-selectivity of biphenylnitriles could not be expected from previous results with a macrocyclophane nitrile template. DFT computational studies show that a ligand-containing Pd-Ag heterodimeric transition state (TS) favors the desired remote meta-selectivity. Control experiments demonstrate the directing effect of the nitrile group and exclude the possibility of non-directed meta-C-H activation. Substituted 2-pyridone ligands were found to be key in assisting the cleavage of the meta-C-H bond in the concerted metalation-deprotonation (CMD) process.
- Published
- 2019
19. Degradation of Protein Kinases: Ternary Complex, Cooperativity, and Selectivity.
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Grigglestone, Claire E. and Kap-Sun Yeung
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- 2021
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20. Phosphocholine Conjugation: An Unexpected In Vivo Conjugation Pathway Associated with Hepatitis C NS5B Inhibitors Featuring A Bicyclo[1.1.1]Pentane
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Xiaohua Stella Huang, Dieter M. Drexler, Xiaoliang Zhuo, John E. Leet, Benjamin M. Johnson, Kyle Parcella, Joseph L. Cantone, Matthew G. Soars, Kathleen W. Mosure, Kap-Sun Yeung, Kyle J. Eastman, Yingzi Wang, and John F. Kadow
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0301 basic medicine ,Pharmacology ,chemistry.chemical_classification ,Bicyclic molecule ,Stereochemistry ,Metabolite ,Pharmaceutical Science ,030226 pharmacology & pharmacy ,Hydroxylation ,03 medical and health sciences ,chemistry.chemical_compound ,Metabolic pathway ,030104 developmental biology ,0302 clinical medicine ,Enzyme ,chemistry ,Biochemistry ,Moiety ,POPC ,Phosphocholine - Abstract
During a medicinal chemistry campaign to identify inhibitors of the hepatitis C virus nonstructural protein 5B (RNA-dependent RNA polymerase), a bicyclo[1.1.1]pentane was introduced into the chemical scaffold to improve metabolic stability. The inhibitors bearing this feature, 5-(3-(bicyclo[1.1.1]pentan-1-ylcarbamoyl)-4-fluorophenyl)-2-(4-fluorophenyl)-N-methyl-6-(3,3,3-trifluoropropyl)furo[2,3-b]pyridine-3-carboxamide (1) and 5-(3-(bicyclo[1.1.1]pentan-1-ylcarbamoyl)phenyl)-2-(4-fluorophenyl)-N-methyl-6-(3,3,3-trifluoropropyl)furo[2,3-b]pyridine-3-carboxamide (2), exhibited low turnover in incubations with liver S9 or hepatocytes (rat, human), with hydroxylation of the bicyclic moiety being the only metabolic pathway observed. In subsequent disposition studies using bile-duct-cannulated rats, the metabolite profiles of bile samples revealed, in addition to multiple products of bicyclopentane-oxidation, unexpected metabolites characterized by molecular masses that were 181 Da greater than those of 1 or 2. Further LC/MSn and NMR analysis of the isolated metabolite of 1 demonstrated the presence of a phosphocholine (POPC) moiety bound to the methine carbon of the bicyclic moiety through an ester bond. The POPC conjugate of the NS5B inhibitors was assumed to result from two sequential reactions: hydroxylation of the bicyclic methine to a tertiary alcohol and addition of POPC by CDP-choline: 1,2-diacylglycerol cholinephosphotransferase, an enzyme responsible for the final step in the biosynthesis of phosphatidylcholine. However, this pathway could not be recapitulated using CDP-choline-supplemented liver S9 or hepatocytes due to inadequate formation of the hydroxylation product in vitro. The observation of this unexpected pathway prompted concerns about the possibility that 1 and 2 might interfere with routine phospholipid synthesis. These results demonstrate the participation in xenobiotic metabolism of a process whose function is ordinarily limited to the synthesis of endogenous compounds.
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- 2016
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21. Structure–Property Basis for Solving Transporter-Mediated Efflux and Pan-Genotypic Inhibition in HCV NS5B Inhibitors
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Hua Fang, Kevin Kish, Mark R. Witmer, Matthew G. Soars, Kyle Parcella, Brett R. Beno, Ying-Kai Wang, Prakash Anjanappa, Julie A. Lemm, Karen Rigat, Katherine A. Grant-Young, Kap-Sun Yeung, Kathy Mosure, Steven Sheriff, Kenneth S. Santone, Jeffrey Tredup, Dawn D. Parker, John F. Kadow, Rajesh Onkardas Bora, Mengping Liu, Nicholas A. Meanwell, Susan B. Roberts, Adam G. Jardel, Rudolph G. Krause, Juliang Zhu, Kumaravel Selvakumar, and Roy Haskell
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Membrane permeability ,010405 organic chemistry ,Hydrogen bond ,Chemistry ,Organic Chemistry ,Transporter ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,Polar surface area ,010404 medicinal & biomolecular chemistry ,chemistry.chemical_compound ,Intramolecular force ,Drug Discovery ,Biophysics ,Molecule ,Efflux ,NS5B - Abstract
[Image: see text] In solving the P-gp and BCRP transporter-mediated efflux issue in a series of benzofuran-derived pan-genotypic palm site inhibitors of the hepatitis C virus NS5B replicase, it was found that close attention to physicochemical properties was essential. In these compounds, where both molecular weight (MW >579) and TPSA (>110 Å(2)) were high, attenuation of polar surface area together with weakening of hydrogen bond acceptor strength of the molecule provided a higher intrinsic membrane permeability and more desirable Caco-2 parameters, as demonstrated by trifluoroacetamide 11 and the benchmark N-ethylamino analog 12. In addition, the tendency of these inhibitors to form intramolecular hydrogen bonds potentially contributes favorably to the improved membrane permeability and absorption. The functional group minimization that resolved the efflux problem simultaneously maintained potent inhibitory activity toward a gt-2 HCV replicon due to a switching of the role of substituents in interacting with the Gln414 binding pocket, as observed in gt-2a NS5B/inhibitor complex cocrystal structures, thus increasing the efficiency of the optimization. Noteworthy, a novel intermolecular S=O···C=O n → π* type interaction between the ligand sulfonamide oxygen atom and the carbonyl moiety of the side chain of Gln414 was observed. The insights from these structure–property studies and crystallography information provided a direction for optimization in a campaign to identify second generation pan-genotypic NS5B inhibitors.
- Published
- 2018
22. Ligand-Accelerated Non-Directed C–H Cyanation of Arenes
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Kap-Sun Yeung, Jin-Quan Yu, and Luo-Yan Liu
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2-Pyridone ,chemistry.chemical_compound ,Limiting reagent ,chemistry ,Ligand ,Molecule ,chemistry.chemical_element ,Cyanation ,Combinatorial chemistry ,Bond cleavage ,Palladium - Abstract
We herein report the first example of a 2-pyridone accelerated non-directed C−H cyanation with an arene as the limiting reagent. This protocol is compatible with a broad scope of arenes, including advanced intermediates, drug molecules, and natural products. A kinetic isotope experiment (kH/kD = 4.40) indicates that the C–H bond cleavage is the rate-limiting step. Also, the reaction is readily scalable, further showcasing the synthetic utility of this method.
- Published
- 2018
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23. A Survey of the Role of Noncovalent Sulfur Interactions in Drug Design
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Kap-Sun Yeung, Nicholas A. Meanwell, Brett R. Beno, Lewis D. Pennington, and Michael D. Bartberger
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Models, Molecular ,Hydrogen bond ,Stereochemistry ,Intermolecular force ,Sulfur metabolism ,Proteins ,chemistry.chemical_element ,Hydrogen Bonding ,Sulfur ,chemistry.chemical_compound ,Atomic orbital ,chemistry ,Chemical physics ,Drug Design ,Intramolecular force ,Drug Discovery ,Humans ,Molecular Medicine ,Molecule ,Organic synthesis - Abstract
Electron deficient, bivalent sulfur atoms have two areas of positive electrostatic potential, a consequence of the low-lying σ* orbitals of the C-S bond that are available for interaction with electron donors including oxygen and nitrogen atoms and, possibly, π-systems. Intramolecular interactions are by far the most common manifestation of this effect, which offers a means of modulating the conformational preferences of a molecule. Although a well-documented phenomenon, a priori applications in drug design are relatively sparse and this interaction, which is often isosteric with an intramolecular hydrogen-bonding interaction, appears to be underappreciated by the medicinal chemistry community. In this Perspective, we discuss the theoretical basis for sulfur σ* orbital interactions and illustrate their importance in the context of drug design and organic synthesis. The role of sulfur interactions in protein structure and function is discussed and although relatively rare, intermolecular interactions between ligand C-S σ* orbitals and proteins are illustrated.
- Published
- 2015
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24. Ligand-Enabled β-C–H Arylation of α-Amino Acids Using a Simple and Practical Auxiliary
- Author
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Jian He, Kap-Sun Yeung, Jin-Quan Yu, Claudio Mapelli, Zhong Jin, Michael A. Poss, Zhipeng Zhang, Suhua Li, Pankaj Jain, Toshihiko Shigenari, Michael M. Miller, Gang Chen, and Paul Michael Scola
- Subjects
chemistry.chemical_classification ,Alanine ,Pyridines ,Stereochemistry ,Ligand ,Phenylalanine ,Carboxylic acid ,Bioactive molecules ,Carboxylic Acids ,Enantioselective synthesis ,Chemistry Techniques, Synthetic ,General Chemistry ,Oxazoline ,Ligands ,Biochemistry ,Article ,Catalysis ,Amino acid ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,chemistry ,Amino Acids ,Palladium ,Hydrogen - Abstract
Pd-catalyzed β-C-H functionalizations of carboxylic acid derivatives using an auxiliary as a directing group have been extensively explored in the past decade. In comparison to the most widely used auxiliaries in asymmetric synthesis, the simplicity and practicality of the auxiliaries developed for C-H activation remains to be improved. We previously developed a simple N-methoxyamide auxiliary to direct β-C-H activation, albeit this system was not compatible with carboxylic acids containing α-hydrogen atoms. Herein we report the development of a pyridine-type ligand that overcomes this limitation of the N-methoxyamide auxiliary, leading to a significant improvement of β-arylation of carboxylic acid derivatives, especially α-amino acids. The arylation using this practical auxiliary is applied to the gram-scale syntheses of unnatural amino acids, bioactive molecules, and chiral bis(oxazoline) ligands.
- Published
- 2015
- Full Text
- View/download PDF
25. Chemistry in the Pharmaceutical Industry
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John F. Kadow, Nicholas A. Meanwell, Kyle J. Eastman, Kap-Sun Yeung, and Joseph Payack
- Published
- 2017
- Full Text
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26. Discovery and Preclinical Characterization of the Cyclopropylindolobenzazepine BMS-791325, A Potent Allosteric Inhibitor of the Hepatitis C Virus NS5B Polymerase
- Author
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Zhong Yang, Jay O. Knipe, Susan B. Roberts, Yong Tu, Paul E. Morin, Ying-Kai Wang, John Wan, Andrew Nickel, Katharine A. Grant-Young, Piyasena Hewawasam, Sam T. Chao, Xiaoliang Zhuo, Bergstrom Carl P, Brett R. Beno, Qi Gao, Dianlin Xie, Chong-Hwan Chang, Dawn D. Parker, Mian Gao, Alicia Regueiro-Ren, Mengping Liu, Umesh Hanumegowda, Richard J. Colonno, Kathy Mosure, Nicholas A. Meanwell, Min Ding, Lenore A. Pelosi, John F. Kadow, Xiaofan Zheng, Steven Sheriff, Voss Stacey A, Alicia Ng, Kenneth S. Santone, Mark R. Witmer, Jung-Hui Sun, Robert G. Gentles, Bender John A, Min Gao, Yi Wang, Jeff Tredup, Daniel M. Camac, Scott W. Martin, Thomas W. Hudyma, Julie A. Lemm, Kap-Sun Yeung, and Karen Rigat
- Subjects
Models, Molecular ,Indoles ,Magnetic Resonance Spectroscopy ,Membrane permeability ,Hepatitis C virus ,Allosteric regulation ,Viral Nonstructural Proteins ,Pharmacology ,medicine.disease_cause ,Antiviral Agents ,Mass Spectrometry ,Structure-Activity Relationship ,chemistry.chemical_compound ,Transactivation ,Dogs ,Allosteric Regulation ,Drug Discovery ,medicine ,Animals ,Humans ,Structure–activity relationship ,Enzyme Inhibitors ,Beclabuvir ,Pregnane X receptor ,Drug discovery ,Benzazepines ,Rats ,Biochemistry ,chemistry ,Molecular Medicine - Abstract
Described herein are structure-activity relationship studies that resulted in the optimization of the activity of members of a class of cyclopropyl-fused indolobenzazepine HCV NS5B polymerase inhibitors. Subsequent iterations of analogue design and syntheses successfully addressed off-target activities, most notably human pregnane X receptor (hPXR) transactivation, and led to significant improvements in the physicochemical properties of lead compounds. Those analogues exhibiting improved solubility and membrane permeability were shown to have notably enhanced pharmacokinetic profiles. Additionally, a series of alkyl bridged piperazine carboxamides was identified as being of particular interest, and from which the compound BMS-791325 (2) was found to have distinguishing antiviral, safety, and pharmacokinetic properties that resulted in its selection for clinical evaluation.
- Published
- 2014
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27. Diverse ortho-C(sp
- Author
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Xi-Hai, Liu, Hojoon, Park, Jun-Hao, Hu, Yan, Hu, Qun-Liang, Zhang, Bao-Long, Wang, Bing, Sun, Kap-Sun, Yeung, Fang-Lin, Zhang, and Jin-Quan, Yu
- Abstract
Pd-catalyzed C-H functionalizations promoted by transient directing groups remain largely limited to C-H arylation only. Herein, we report a diverse set of ortho-C(sp
- Published
- 2016
28. The discovery of a pan-genotypic, primer grip inhibitor of HCV NS5B polymerase
- Author
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Katharine A. Grant-Young, Maria Tuttle, Nicholas A. Meanwell, Susan B. Roberts, Maria Donoso, Kap-Sun Yeung, Ying-Kai Wang, Matthew G. Soars, Julie A. Lemm, Vivek Halan, Tatyana Zvyaga, Kyle J. Eastman, Jeffrey Tredup, Zuzana Haarhoff, Karen Rigat, Xiaoliang Zhuo, Umesh Hanumegowda, Steven Sheriff, Kathy Mosure, Kaushik Ghosh, Kyle Parcella, Hua Fang, Adam G. Jardel, Brett R. Beno, Kevin Kish, Tao Wang, Dawn D. Parker, Zhiwei Yin, Zhongxing Zhang, John F. Kadow, and Juliang Zhu
- Subjects
0301 basic medicine ,Pharmacology ,viruses ,Organic Chemistry ,Pharmaceutical Science ,virus diseases ,Metabolic stability ,Biology ,biochemical phenomena, metabolism, and nutrition ,Biochemistry ,Virology ,Ns5b polymerase ,digestive system diseases ,Bioavailability ,body regions ,03 medical and health sciences ,Chemistry ,030104 developmental biology ,Drug Discovery ,Genotype ,Molecular Medicine ,Primer (molecular biology) - Abstract
The development of a series of novel 7-azabenzofurans exhibiting pan-genotype inhibition of HCV NS5B polymerase via binding to the primer grip site is presented. Many challenges, including poor oral bioavailability, high clearance, bioactivation, high human serum shift, and metabolic stability were encountered and overcome through SAR studies. This work culminated in the selection of BMS-986139 (43) as a preclinical candidate.
- Published
- 2016
29. Inhibitors of HIV-1 attachment. Part 2: An initial survey of indole substitution patterns
- Author
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Nicholas A, Meanwell, Owen B, Wallace, Haiquan, Fang, Henry, Wang, Milind, Deshpande, Tao, Wang, Zhiwei, Yin, Zhongxing, Zhang, Bradley C, Pearce, Jennifer, James, Kap-Sun, Yeung, Zhilei, Qiu, J J, Kim Wright, Zheng, Yang, Lisa, Zadjura, Donald L, Tweedie, Suresh, Yeola, Fang, Zhao, Sunanda, Ranadive, Brett A, Robinson, Yi-Fei, Gong, Hwei-Gene Heidi, Wang, Timothy P, Spicer, Wade S, Blair, Pei-Yong, Shi, Richard J, Colonno, and Pin-Fang, Lin
- Subjects
Indoles ,Stereochemistry ,Clinical Biochemistry ,Virus Attachment ,Pharmaceutical Science ,HIV Infections ,HIV Envelope Protein gp120 ,Biochemistry ,Cell Line ,Structure-Activity Relationship ,Dogs ,HIV Fusion Inhibitors ,Drug Discovery ,Animals ,Humans ,Structure–activity relationship ,Potency ,Moiety ,Molecular Biology ,Alkyl ,Indole test ,chemistry.chemical_classification ,Organic Chemistry ,In vitro ,Rats ,chemistry ,HIV-1 ,Alkoxy group ,Molecular Medicine ,Pharmacophore - Abstract
The effects of introducing simple halogen, alkyl, and alkoxy substituents to the 4, 5, 6 and 7 positions of 1-(4-benzoylpiperazin-1-yl)-2-(1H-indol-3-yl)ethane-1,2-dione, an inhibitor of the interaction between HIV gp120 and host cell CD4 receptors, on activity in an HIV entry assay was examined. Small substituents at C-4 generally resulted in increased potency whilst substitution at C-7 was readily tolerated and uniformly produced more potent HIV entry inhibitors. Substituents deployed at C-6 and, particularly, C-5 generally produced a modest to marked weakening of potency compared to the prototype. Small alkyl substituents at N-1 exerted minimal effect on activity whilst increasing the size of the alkyl moiety led to progressively reduced inhibitory properties. These studies establish a basic understanding of the indole element of the HIV attachment inhibitor pharmacophore.
- Published
- 2009
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30. Advances in total synthesis of biologically important marine macrolides
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Kap-Sun Yeung and Paterson, Ian
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Marine bacteria -- Structure ,Marine bacteria -- Chemical properties ,Macrolide antibiotics -- Structure ,Macrolide antibiotics -- Research ,Chemistry - Abstract
Advances in the total synthesis of biologically important marine macrolides are described. Total synthesis of biologically important marine macrolides like spongistatin 1/altohyrtin, spongistatin 2/altohyrtin, dictyostatin, peloruside A, leucascandrolide A, callipeltoside A and ent-miyakolide are successfully achieved and these syntheses also served to confirm or establish the absolute stereo structures of the marine macrolides.
- Published
- 2005
31. An efficient one-pot synthesis of 3-glyoxylic acids of electron-deficient substituted azaindoles by ionic liquid imidazolium chloroaluminate-promoted Friedel–Crafts acylation
- Author
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Zhilei Qiu, Michelle E. Farkas, Bender John A, Andrew C. Good, Zhong Yang, Qiufen Xue, John F. Kadow, Alicia Regueiro-Ren, and Kap-Sun Yeung
- Subjects
Chemistry ,Organic Chemistry ,One-pot synthesis ,Electron ,Mole fraction ,Biochemistry ,Chloride ,Acylation ,Hydrolysis ,chemistry.chemical_compound ,Drug Discovery ,Ionic liquid ,Polymer chemistry ,medicine ,Friedel–Crafts reaction ,medicine.drug - Abstract
An efficient, one-pot Friedel–Crafts acylation/hydrolysis reaction promoted by the acidic ionic liquid 1-ethyl-3-methylimidazolium chloroaluminate (generated from 1-ethyl-3-methylimidazolium chloride (EmimCl) and aluminum chloride (X(AlCl3), mole fraction X = 0.75) for the formation of 3-glyoxylic acid derivatives of electron-deficient, substituted 4- and 6-azaindoles is described.
- Published
- 2008
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32. Recent Developments in the Virology and Antiviral Research of Severe Acute Respiratory Syndrome Coronavirus
- Author
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Kap Sun Yeung and Nicholas A. Meanwell
- Subjects
Microbiology (medical) ,viruses ,RNA-dependent RNA polymerase ,Genome, Viral ,Antibodies, Viral ,Severe Acute Respiratory Syndrome ,medicine.disease_cause ,Antiviral Agents ,Viral Proteins ,chemistry.chemical_compound ,Viral Envelope Proteins ,Chiroptera ,Ribavirin ,medicine ,Animals ,Humans ,RNA, Small Interfering ,skin and connective tissue diseases ,Clinical treatment ,Coronavirus ,Pharmacology ,Membrane Glycoproteins ,biology ,business.industry ,fungi ,virus diseases ,Spike Protein ,Viral Vaccines ,General Medicine ,Virology ,body regions ,Disease Models, Animal ,Severe acute respiratory syndrome-related coronavirus ,chemistry ,Viral protease ,Spike Glycoprotein, Coronavirus ,biology.protein ,Molecular Medicine ,Severe acute respiratory syndrome coronavirus ,Antibody ,business ,Peptide Hydrolases - Abstract
This article summarizes the significant developments and new discoveries in both the virology and antiviral research associated with the severe acute respiratory syndrome coronavirus (SARS CoV) that were reported in 2005 and 2006. Areas reviewed include genomic studies and the identification of bat-SARS CoV, spike protein and host cell entry, nucleocapsid protein, accessory proteins, non-structural proteins of the replicase complex, viral proteases and their inhibitors, and clinical treatment of SARS with ribavirin.
- Published
- 2007
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33. Developments in Antiviral Drug Design, Discovery and Development in 2004
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Nicholas A. Meanwell, Mark Krystal, David J. Carini, Sing-Yuen Sit, John F. Kadow, Tao Wang, Kap-Sun Yeung, Stanley D'andrea, Michael A. Walker, B. N. Naidu, Paul Michael Scola, Alicia Regueiro-Ren, and Makonen Belema
- Subjects
Microbiology (medical) ,Human cytomegalovirus ,Anti-HIV Agents ,medicine.drug_class ,viruses ,Molecular Sequence Data ,Drug Evaluation, Preclinical ,medicine.disease_cause ,Antiviral Agents ,Virus ,Human metapneumovirus ,Hepatitis Viruses ,medicine ,Animals ,Humans ,Protease Inhibitors ,Amino Acid Sequence ,HIV Integrase Inhibitors ,Herpesviridae ,Nucleic Acid Synthesis Inhibitors ,Pharmacology ,Clinical Trials as Topic ,Ebola virus ,Molecular Structure ,biology ,business.industry ,Varicella zoster virus ,virus diseases ,Nucleosides ,Hepatitis C ,Hepatitis B ,Orthomyxoviridae ,medicine.disease ,biology.organism_classification ,Virology ,Severe acute respiratory syndrome-related coronavirus ,Drug Design ,HIV-2 ,HIV-1 ,Reverse Transcriptase Inhibitors ,Molecular Medicine ,Antiviral drug ,business - Abstract
This article summarizes key aspects of progress made during 2004 toward the design, discovery and development of antiviral agents for clinical use. Important developments in the identification, characterization and clinical utility of inhibitors of human immunodeficiency virus; the hepatitis viruses, hepatitis B, hepatitis C; the herpes family of viruses, herpes simplex viruses 1 and 2, varicella zoster virus, Epstein-Barr virus and human cytomegalovirus; the respiratory viruses, influenza, respiratory syncytial virus, human metapneumovirus, picornaviruses, measles and the severe acute respiratory syndrome coronavirus; human papilloma virus; rotavirus; Ebola virus and West Nile virus, are reviewed.
- Published
- 2005
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34. Advances in the Total Synthesis of Biologically Important Marine Macrolides
- Author
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Kap-Sun Yeung and Ian Paterson
- Subjects
Protein Conformation ,Chemistry ,Stereochemistry ,Molecular Conformation ,Total synthesis ,Stereoisomerism ,General Medicine ,General Chemistry ,Combinatorial chemistry ,Molecular conformation ,Protein Structure, Tertiary ,Structure-Activity Relationship ,Protein structure ,Biochemistry ,Cyclization ,Animals ,Structure–activity relationship ,Marine Toxins ,Macrolides - Published
- 2005
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35. A base-catalyzed, direct synthesis of 3,5-disubstituted 1,2,4-triazoles from nitriles and hydrazides
- Author
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Nicholas A. Meanwell, Michelle E. Farkas, John F. Kadow, and Kap-Sun Yeung
- Subjects
Reaction conditions ,chemistry.chemical_classification ,Nitrile ,Base (chemistry) ,Organic Chemistry ,Condensation ,1,2,4-Triazole ,General Medicine ,Hydrazide ,Combinatorial chemistry ,Biochemistry ,Catalysis ,chemistry.chemical_compound ,chemistry ,Drug Discovery ,Electronic effect ,Organic chemistry ,Reactivity (chemistry) - Abstract
A convenient and efficient one step, base-catalyzed synthesis of 3,5-disubstituted 1,2,4-triazoles by the condensation of a nitrile and a hydrazide is presented. A diverse range of functionality and heterocycles are tolerated under the reaction conditions developed, and the reactivity of the nitrile partner is relatively insensitive to electronic effects.
- Published
- 2005
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36. Actin-bindende marine Makrolide: Totalsynthese und biologische Bedeutung
- Author
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Ian Paterson and Kap-Sun Yeung
- Subjects
General Medicine - Abstract
Marine Organismen produzieren eine faszinierende Vielfalt von Sekundarmetaboliten unterschiedlicher Struktur mit haufig ungewohnlichen und manchmal unerwarteten biologischen Wirkungen. Ihre strukturelle Diversitat macht diese marinen Naturstoffe zu ausgezeichneten Testverbindungen fur die Untersuchung biochemischer Mechanismen. Kurzlich wurden aus verschiedenen marinen Organismen mehrere neue, stereochemisch komplexe Makrolide mit grosem Lactonring (22- bis 44-gliedrig) isoliert, die mit dem Actin-Cytoskelett wechselwirken. Actin ist wie Tubulin ein Hauptbestandteil des Cytoskeletts und hat wichtige zellulare Funktionen. Auch wenn die Einzelheiten dieser Wechselwirkungen noch untersucht werden, erhalten diese marinen Makrolide zunehmend Bedeutung als neue Testverbindungen zur Aufklarung der zellularen Wirkungen von Actin. Wegen ihrer starken Antitumorwirkung kommen diese Verbindungen, z. B. die Aplyronine, fur Anwendungen in der vorklinischen Entwicklung der Krebs-Chemotherapie infrage. Ihre interessanten Molekulstrukturen mit einer Fulle von Stereozentren und ihre biologische Bedeutung haben angesichts ihres auserst begrenzten Vorkommens in marinen Organismen ein enormes Interesse an der Synthese dieser Verbindungen geweckt. Dieser Aufsatz gibt einen Uberblick uber die biologischen Eigenschaften dieser ungewohnlichen Naturstoffe und schildert die kurzlich beendeten Totalsynthesen von Swinholid A, Scytophycin C, Aplyronin A, Mycalolid A – alle sind stark cytotoxische Actin-bindende Wirkstoffe – und eines Diastereomers von Ulapualid A. Dabei wird nicht jeder Einzelschritt dieser vielstufigen Totalsynthesen detailliert beschrieben, vielmehr werden unterschiedliche Synthesestrategien, Schlusselreaktionen und Methoden zur Steuerung der Stereochemie verglichen.
- Published
- 2002
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37. Highly potent non-peptidic inhibitors of the HCV NS3/NS4A serine protease
- Author
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Andrew J. Staab, James M. Clark, Steve Weinheimer, Dennis Hernandez, James W. Janc, Joane Litvak, Emma J. Shelton, Jeffrey R. Spencer, Richard Goldsmith, Anthony R. Gangloff, Kenneth D. Rice, David Sperandio, Kap-Sun Yeung, Kyle Elrod, Brian Lee Venables, Nicholas A. Meanwell, Vivian R. Wang, and Jason M. Hataye
- Subjects
Serine Proteinase Inhibitors ,Stereochemistry ,viruses ,Clinical Biochemistry ,Pharmaceutical Science ,Peptide ,Hepacivirus ,Viral Nonstructural Proteins ,Biochemistry ,Structure-Activity Relationship ,chemistry.chemical_compound ,Drug Discovery ,medicine ,Structure–activity relationship ,Molecular Biology ,Edetic Acid ,chemistry.chemical_classification ,Serine protease ,NS3 ,Dipeptide ,biology ,Organic Chemistry ,Protease inhibitor (biology) ,Zinc ,Enzyme ,chemistry ,biology.protein ,RNA, Viral ,Molecular Medicine ,Benzimidazoles ,Indicators and Reagents ,Peptides ,medicine.drug - Abstract
Screening of a diverse set of bisbenzimidazoles for inhibition of the hepatitis C virus (HCV) serine protease NS3/NS4A led to the identification of a potent Zn(2+)-dependent inhibitor (1). Optimization of this screening hit afforded a 10-fold more potent inhibitor (46) under Zn(2+) conditions (K(i)=27nM). This compound (46) binds also to NS3/NS4A in a Zn(2+) independent fashion (K(i)=1microM). The SAR of this class of compounds under Zn(2+) conditions is highly divergent compared to the SAR in the absence of Zn(2+), suggesting two distinct binding modes.
- Published
- 2002
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38. ChemInform Abstract: Five-Membered Ring Systems: Furans and Benzofurans
- Author
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Kap-Sun Yeung, Xiao-Shui Peng, Jie Wu, Renhua Fan, and Xue-Long Hou
- Subjects
General Medicine - Published
- 2014
- Full Text
- View/download PDF
39. The total synthesis of scytophycin C. Part 2: synthesis of scytophycin C from the protected seco acid
- Author
-
Paul Wallace, Richard A. Ward, Kap-Sun Yeung, Ian Paterson, and Christine Anne Louise Watson
- Subjects
Chemistry ,Stereochemistry ,Organic Chemistry ,Drug Discovery ,Scytophycin C ,Total synthesis ,Moiety ,Regioselectivity ,Biochemistry ,Isomerization - Abstract
Scytophycin C (1) was synthesised in 8 steps from the fully protected seco acid 2 . Key steps include: ( i ) a high yielding macrolactonisation reaction of 15 followed by regioselective isomerisation of the undesired, 24-membered macrolide, 18 → 16 ; ( ii ) the chemoselective oxidation steps, 16 → 6 and 7 → 8; ( iii ) the P 2 O 5 -promoted condensation of 8 with HN(Me)CHO to install the N -methyl vinylformamide moiety in 1 .
- Published
- 1998
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40. The total synthesis of scytophycin C. Part 1: stereocontrolled synthesis of the C1C32 protected seco acid
- Author
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Kap-Sun Yeung, Ian Paterson, Paul Wallace, Richard A. Ward, and Christine J. Watson
- Subjects
chemistry.chemical_classification ,Ketone ,Stereochemistry ,Organic Chemistry ,Diol ,Total synthesis ,Alcohol ,Silyl enol ether ,Biochemistry ,Aldehyde ,Adduct ,chemistry.chemical_compound ,chemistry ,Aldol reaction ,Drug Discovery - Abstract
A stereocontrolled synthesis of the C 1 C 32 seco acid derivative 9 for scytophycin C ( 1 ) was completed in 14 steps (18.2% yield, 85% ds) from aldehyde ( S )- 18 . Key steps include: ( i ) the asymmetric crotylboration of ( S )- 18 to give homoallylic alcohol 15 ; ( ii ) the boron-mediated aldol construction of aldehyde 14 from ( S )- 17 ; ( iii ) the Ba(OH) 2 -promoted HWE reaction, 13 + 14 → 31 ; ( iv ) the highly stereocontrolled Mukaiyama aldol coupling between silyl enol ether 33 and aldehyde 11 to give adduct 10 ; ( v ) the chemoselective reduction at C 17 of ketone 10 to produce 1,3- syn -diol 34 .
- Published
- 1998
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41. A synthesis of 4-thiomethylbenzisothiazolone-1,1-dioxide using HDPT
- Author
-
Nicholas A. Meanwell and Kap-Sun Yeung
- Subjects
Reaction conditions ,chemistry.chemical_classification ,chemistry.chemical_compound ,Chemistry ,Bromide ,Organic Chemistry ,Drug Discovery ,Thiol ,Organic chemistry ,Halogenation ,Moiety ,Regioselectivity ,Biochemistry - Abstract
4-Thiomethylbenzisothiazolone-1,1-dioxides were synthesized via the corresponding 4-methylbenzisothiazolone-1,1-dioxides by a regioselective benzylic bromination, followed by conversion of the bromide to the thiol moiety under mild and neutral reaction conditions using 1-(2-hydroxyethyl)-4,6-diphenylpyridine-2-thione (HDPT).
- Published
- 1998
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42. A facile construction of 4-hydroxymethylbenzisothiazolone-1,1-dioxide
- Author
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Yi Li, Kap-Sun Yeung, Qi Gao, and Nicholas A. Meanwell
- Subjects
Steric effects ,Chemistry ,Hydrogen bond ,Organic Chemistry ,Aromatization ,Regioselectivity ,Nanotechnology ,Biochemistry ,Medicinal chemistry ,Cycloaddition ,Adduct ,Furfuryl alcohol ,chemistry.chemical_compound ,Intramolecular force ,Drug Discovery - Abstract
4-Hydroxymethylbenzisothiazolone-1,1-dioxide could be facilely synthesised via a highly regioselective Diels-Alder cycloaddition between furfuryl alcohol and 2-( tert -butyl)-isothiazolone-1,1-dioxide, followed by aromatization of the adduct under basic conditions. A secondary effect from intramolecular hydrogen bonding is found also to influence the regioselectivity of the cycloaddition. Unequivocal proof of the regiochemistry of the Diels-Alder reaction is provided by X-ray crystallography and ab initio calculations showed electronic and steric effects on transition structure asynchronicity.
- Published
- 1998
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43. Antiviral Drug Discovery
- Author
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Kap-Sun Yeung, Ira B. Dicker, Christopher Cianci, Nicholas A. Meanwell, Stanley D'andrea, Makonen Belema, and Mark Krystal
- Subjects
medicine.drug_class ,Varicella zoster virus ,medicine ,Biology ,Antiviral drug ,medicine.disease_cause ,Virology - Published
- 2013
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44. Bioactivation of cyclopropyl rings by P450: an observation encountered during the optimisation of a series of hepatitis C virus NS5B inhibitors.
- Author
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Xiaoliang Zhuo, Ying-Zi Wang, Xiaohua Stella Huang, Yue-Zhong Shu, Johnson, Benjamin M., Kap-Sun Yeung, Juliang Zhu, Parcella, Kyle E., Eastman, Kyle J., Kadow, John F., and Meanwell, Nicholas A.
- Subjects
CYCLOPROPYL compounds ,BIOTRANSFORMATION (Metabolism) ,HEPATITIS C virus ,GLUTATHIONE ,PHARMACEUTICAL chemistry - Abstract
1. Due to its unique C-C and C-H bonding properties, conformational preferences and relative hydrophilicity, the cyclopropyl ring has been used as a synthetic building block in drug discovery to modulate potency and drug-like properties. During an effort to discover inhibitors of the hepatitis C virus non-structural protein 5B with improved potency and genotype-coverage profiles, the use of a pyrimidinylcyclopropylbenzamide moiety linked to a C6-substituted benzofuran or azabenzofuran core scaffold was explored in an effort to balance antiviral potency and metabolic stability. 2. In vitro metabolism studies of two compounds from this C6-substituted series revealed an NADPH-dependent bioactivation pathway leading to the formation of multiple glutathione (GSH) conjugates. Analysis of these conjugates by LC-MS and NMR demonstrated that the cyclopropyl group was the site of bioactivation. Based on the putative structures and molecular weights of the cyclopropyl-GSH conjugates, a multi-step mechanism was proposed to explain the formation of these metabolites by P450. This mechanism involves hydrogen atom abstraction to form a cyclopropyl radical, followed by a ring opening rearrangement and reaction with GSH. 3. These findings provided important information to the medicinal chemistry team which responded by replacing the cyclopropyl ring with a gem-dimethyl group. Subsequent compounds bearing this feature were shown to avert the bioactivation pathways in question. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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45. Five-Membered Ring Systems
- Author
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Xiao-Shui Peng, Jie Wu, Kap-Sun Yeung, Renhua Fan, and Xue-Long Hou
- Subjects
Chemistry ,Organic chemistry ,Ring (chemistry) - Abstract
This review covers work published in the calendar year 2012. References to new, naturally occurring furans, dihydrofurans, and tetrahydrofurans are given. New methods for the ring synthesis of furans, dihydrofurans, and tetrahydrofurans, and benzofurans are discussed. Novel reaction chemistry of furans, dihydrofurans, and tetrahydrofurans, and benzofurans is covered.
- Published
- 2013
- Full Text
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46. Inhibitors of hERG Channel Trafficking
- Author
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Nicholas A. Meanwell and Kap-Sun Yeung
- Subjects
congenital, hereditary, and neonatal diseases and abnormalities ,biology ,Chemistry ,Long QT syndrome ,Cell ,hERG ,Pharmacology ,medicine.disease ,QT interval ,Potassium channel ,Electrophysiology ,medicine.anatomical_structure ,Mechanism of action ,medicine ,biology.protein ,cardiovascular diseases ,medicine.symptom ,Biochemical Pharmacology - Abstract
Direct blockade of the cardiac potassium channel encoded by the KCNH2 gene, the human ether-a-go-go related gene (hERG) product, has been recognized for some time as a potential liability that is typically assessed by electrophysiological testing during preclinical profiling of drug candidates. However, inhibition of hERG protein trafficking has emerged as a potential mechanism of interfering with channel function that can only be detected by a very different screening paradigm that relies on extended incubation of hERG-expressing cells with candidate compounds. In this chapter, the background biochemical pharmacology underlying hERG protein trafficking is discussed and those compounds that have been shown to interfere with hERG channel expression on the cell surface together with insights into their mechanism of action are summarized. Assays that have recently been developed to detect hERG trafficking inhibitors are also described.
- Published
- 2013
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47. To exploit the exploitation of actin by HIV?
- Author
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Kap-Sun Yeung and Gregory Yamanaka
- Subjects
Pharmacology ,Viral Components ,Exploit ,biology ,Anti-HIV Agents ,Drug discovery ,Transmission (medicine) ,Human immunodeficiency virus (HIV) ,virus diseases ,HIV Infections ,biology.organism_classification ,medicine.disease_cause ,Actins ,Cell biology ,Retrovirus ,Drug Design ,Drug Discovery ,medicine ,Humans ,Cytoskeleton ,Actin - Abstract
Because HIV relies on host cell machinery for infection, replication and transmission, future anti-HIV therapeutic agents that target the interactions between viral components and host cell proteins, such as actin, are likely to emerge.
- Published
- 2004
- Full Text
- View/download PDF
48. The total synthesis of swinholide A. Part 4: Synthesis of swinholide A and isoswinholide A from the protected monomeric seco acid, pre-swinholide A
- Author
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Ian Paterson, Serge Lamboley, John G. Cuimming, Kap-Sun Yeung, J. D. Smith, and Richard A. Ward
- Subjects
chemistry.chemical_classification ,Stereochemistry ,Organic Chemistry ,Swinholide A ,Total synthesis ,Regioselectivity ,Biochemistry ,Acylation ,Ring size ,chemistry.chemical_compound ,Hydrolysis ,Monomer ,chemistry ,Drug Discovery ,Lactone - Abstract
Swinholide A and isoswinholide A were synthesised in 7 steps from the fully protected seco acid 4 . Key steps include: ( i) bimolecular acylation, 7 + 10 → 12 , ( ii ) selective hydrolysis of the methyl ester, 16 → 17 , and ( iii ) regioselective macrolactonisation. 17 → 18 . The monomeric lactone analogues 2 and 5 were prepared by regioselective macrolactonisation of the seco acid 6 , where the ring size was controlled by variation of the reaction conditions.
- Published
- 1995
- Full Text
- View/download PDF
49. The total synthesis of swinholide A. Part 3: A stereocontrolled synthesis of (−)-pre-swinholide A
- Author
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Richard A. Ward, Kap-Sun Yeung, Ian Paterson, John G. Cumming, and J. D. Smith
- Subjects
chemistry.chemical_classification ,Ketone ,Aldol reaction ,Chemistry ,Methyl Ketone ,Stereochemistry ,Organic Chemistry ,Drug Discovery ,Swinholide A ,Total synthesis ,Biochemistry ,Aldehyde - Abstract
Two coupling strategies for (−)-pre-swinholide A were devised based on the analysis in Scheme 1. In the first route, a boron-mediated aldol reaction between the ethyl ketone 19 and the aldehyde 3 was used to construct the C15-C16 bond with moderate diastereoselectivity. In the second route, a Mukaiyama aldol reaction between the methyl ketone 54 and the aldehyde 4 introduced the C18-C19 bond with complete stereocontrol.
- Published
- 1995
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50. Inhibitors of HIV-1 attachment. Part 9: an assessment of oral prodrug approaches to improve the plasma exposure of a tetrazole-containing derivative
- Author
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Zhilei Qiu, Keith Riccardi, Nicholas A. Meanwell, Betsy J. Eggers, Lisa Zadjura, Ping-Fang Lin, Steven Hansel, Kap-Sun Yeung, Xiaohua Stella Huang, Zheng Yang, John F. Kadow, Marc Browning, and Celia D’Arienzo
- Subjects
Anti-HIV Agents ,Clinical Biochemistry ,Pharmaceutical Science ,Administration, Oral ,Tetrazoles ,Virus Attachment ,Absorption (skin) ,Pharmacology ,Biochemistry ,chemistry.chemical_compound ,Structure-Activity Relationship ,In vivo ,Drug Discovery ,Structure–activity relationship ,Moiety ,Animals ,Humans ,Tetrazole ,Prodrugs ,Molecular Biology ,Organic Chemistry ,Prodrug ,Bioavailability ,Rats ,chemistry ,HIV-1 ,Molecular Medicine ,Derivative (chemistry) ,Half-Life - Abstract
7-(2H-Tetrazol-5-yl)-1H-indole 3 was found to be a potent inhibitor of HIV-1 attachment but the compound lacked oral bioavailability in rats. The cause of the low exposure was believed to be poor absorption attributed to the acidic nature of the tetrazole moiety and, in an effort to address this liability, three more lipohilic tetrazole analogs, N-acetoxymethyl 4, N-pivaloyloxymethyl 5, and N-methyl 6, were evaluated as potential oral prodrugs in rats. Prodrug 5 was ineffective in improving the plasma concentration of 3 in vivo but compound 4 provided a 15-fold enhancement of the plasma concentration of 3. Most interestingly, oral dosing of analog 6 afforded a substantial increase in the plasma concentration of the parent in rats when compared to dosing of parent. This represents a novel example of a methyl tetrazole that acts as a prodrug for a free NH tetrazole-containing compound.
- Published
- 2012
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