141,501 results on '"Bowman, A"'
Search Results
2. Faithful covers of Khovanov arc algebras
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Bowman, Chris, De Visscher, Maud, Dell'Arciprete, Alice, Hazi, Amit, Muth, Rob, and Stroppel, Catharina
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Mathematics - Representation Theory ,Mathematics - Quantum Algebra - Abstract
We show that the extended Khovanov algebra $K^m_n$ is an $(|n-m|-1)$-faithful cover of the Khovanov arc algebra $H^m_n$.
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- 2024
3. Quiver presentations and Schur--Weyl duality for Khovanov arc algebras
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Bowman, Chris, De Visscher, Maud, Dell'Arciprete, Alice, Hazi, Amit, Muth, Rob, and Stroppel, Catharina
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Mathematics - Representation Theory ,Mathematics - Combinatorics ,Mathematics - Quantum Algebra - Abstract
We provide an ${\rm Ext}$-quiver and relations presentation of the Khovanov arc algebras and prove a precise analogue of the Kleshchev--Martin conjecture in this setting.
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- 2024
4. Quantum mechanical deconstruction of vibrational energy transfer rate and pathways modified by collective vibrational strong coupling
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Yu, Qi, Zhang, Dong H., and Bowman, Joel M.
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Physics - Chemical Physics ,Physics - Atomic and Molecular Clusters ,Physics - Optics - Abstract
Recent experiments have demonstrated that vibrational strong coupling (VSC) between molecular vibrations and the optical cavity field can modify vibrational energy transfer (VET) processes in molecular systems. However, the underlying mechanisms and the behavior of individual molecules under collective VSC remain largely incomplete. In this work, we combine state-of-the-art quantum vibrational spectral calculation, quantum wavepacket dynamics simulations, and ab initio machine-learning potential to elucidate how the vibrational dynamics of water OH stretches can be altered by VSC. Taking the (H$_2$O)$_{21}$-cavity system as an example, we show that the collective VSC breaks the localization picture, promotes the delocalization of OH stretches, and opens new intermolecular vibrational energy pathways involving both neighboring and remote water molecules. The manipulation of the VET process relies on the alignment of the transition dipole moment orientations of the corresponding vibrational states. The emergence of new energy transfer pathways is found to be attributed to cavity-induced vibrational resonance involving OH stretches across different water molecules, along with alterations in mode coupling patterns. Our fully quantum theoretical calculations not only confirm and extend previous findings on cavity-modified energy transfer processes but also provide new insights in energy transfer processes under collective VSC.
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- 2024
5. Quantum Mini-Apps for Engineering Applications: A Case Study
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Mărgărit, Horia, Bowman, Amanda, Karuppasamy, Krishnageetha, Maldonado-Romo, Alberto, Sahgal, Vardaan, and McDermott, Brian J.
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Quantum Physics ,Computer Science - Emerging Technologies - Abstract
In this work, we present a case study in implementing a variational quantum algorithm for solving the Poisson equation, which is a commonly encountered partial differential equation in science and engineering. We highlight the practical challenges encountered in mapping the algorithm to physical hardware, and the software engineering considerations needed to achieve realistic results on today's non-fault-tolerant systems., Comment: 8 pages, 6 figures, submitted on 2024-10-10 to IEEE Quantum Software and its Engineering
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- 2024
6. Structure learning with Temporal Gaussian Mixture for model-based Reinforcement Learning
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Champion, Théophile, Grześ, Marek, and Bowman, Howard
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Computer Science - Machine Learning ,Computer Science - Artificial Intelligence ,Statistics - Machine Learning - Abstract
Model-based reinforcement learning refers to a set of approaches capable of sample-efficient decision making, which create an explicit model of the environment. This model can subsequently be used for learning optimal policies. In this paper, we propose a temporal Gaussian Mixture Model composed of a perception model and a transition model. The perception model extracts discrete (latent) states from continuous observations using a variational Gaussian mixture likelihood. Importantly, our model constantly monitors the collected data searching for new Gaussian components, i.e., the perception model performs a form of structure learning (Smith et al., 2020; Friston et al., 2018; Neacsu et al., 2022) as it learns the number of Gaussian components in the mixture. Additionally, the transition model learns the temporal transition between consecutive time steps by taking advantage of the Dirichlet-categorical conjugacy. Both the perception and transition models are able to forget part of the data points, while integrating the information they provide within the prior, which ensure fast variational inference. Finally, decision making is performed with a variant of Q-learning which is able to learn Q-values from beliefs over states. Empirically, we have demonstrated the model's ability to learn the structure of several mazes: the model discovered the number of states and the transition probabilities between these states. Moreover, using its learned Q-values, the agent was able to successfully navigate from the starting position to the maze's exit.
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- 2024
7. Impacts and Statistical Mitigation of Missing Data on the 21cm Power Spectrum: A Case Study with the Hydrogen Epoch of Reionization Array
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Chen, Kai-Feng, Wilensky, Michael J., Liu, Adrian, Dillon, Joshua S., Hewitt, Jacqueline N., Adams, Tyrone, Aguirre, James E., Baartman, Rushelle, Beardsley, Adam P., Berkhout, Lindsay M., Bernardi, Gianni, Billings, Tashalee S., Bowman, Judd D., Bull, Philip, Burba, Jacob, Byrne, Ruby, Carey, Steven, Choudhuri, Samir, Cox, Tyler, DeBoer, David R., Dexter, Matt, Eksteen, Nico, Ely, John, Ewall-Wice, Aaron, Furlanetto, Steven R., Gale-Sides, Kingsley, Garsden, Hugh, Gehlot, Bharat Kumar, Gorce, Adélie, Gorthi, Deepthi, Halday, Ziyaad, Hazelton, Bryna J., Hickish, Jack, Jacobs, Daniel C., Josaitis, Alec, Kern, Nicholas S., Kerrigan, Joshua, Kittiwisit, Piyanat, Kolopanis, Matthew, La Plante, Paul, Lanman, Adam, Ma, Yin-Zhe, MacMahon, David H. E., Malan, Lourence, Malgas, Cresshim, Malgas, Keith, Marero, Bradley, Martinot, Zachary E., McBride, Lisa, Mesinger, Andrei, Mohamed-Hinds, Nicel, Molewa, Mathakane, Morales, Miguel F., Murray, Steven G., Nuwegeld, Hans, Parsons, Aaron R., Pascua, Robert, Qin, Yuxiang, Rath, Eleanor, Razavi-Ghods, Nima, Robnett, James, Santos, Mario G., Sims, Peter, Singh, Saurabh, Storer, Dara, Swarts, Hilton, Tan, Jianrong, van Wyngaarden, Pieter, and Zheng, Haoxuan
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Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
The precise characterization and mitigation of systematic effects is one of the biggest roadblocks impeding the detection of the fluctuations of cosmological 21cm signals. Missing data in radio cosmological experiments, often due to radio frequency interference (RFI), poses a particular challenge to power spectrum analysis as it could lead to the ringing of bright foreground modes in Fourier space, heavily contaminating the cosmological signals. Here we show that the problem of missing data becomes even more arduous in the presence of systematic effects. Using a realistic numerical simulation, we demonstrate that partially flagged data combined with systematic effects can introduce significant foreground ringing. We show that such an effect can be mitigated through inpainting the missing data. We present a rigorous statistical framework that incorporates the process of inpainting missing data into a quadratic estimator of the 21cm power spectrum. Under this framework, the uncertainties associated with our inpainting method and its impact on power spectrum statistics can be understood. These results are applied to the latest Phase II observations taken by the Hydrogen Epoch of Reionization Array, forming a crucial component in power spectrum analyses as we move toward detecting 21cm signals in the ever more noisy RFI environment., Comment: 25 pages, 11 figures, submitted to ApJ
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- 2024
8. Differentiable Land Model Reveals Global Environmental Controls on Ecological Parameters
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Fang, Jianing, Bowman, Kevin, Zhao, Wenli, Lian, Xu, and Gentine, Pierre
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Physics - Geophysics - Abstract
Accurate modeling of terrestrial carbon and water exchange requires robust ecological parameters that capture vegetation responses and adaptations to the local environment. The current generation of land models use Plant Functional Types (PFTs) to discretize vegetation functional diversity, but these coarse categorizations often overlook fine-scale variations shaped by local climate, soil, and forest age factors. The lack of governing equations for plant adaptation demands a paradigm shift in how we integrate diverse Earth observations to uncover ecological functional dependence on changing environments. To address this challenge, we developed DifferLand, a differentiable, hybrid physics and machine learning model that infers the spatial distributions of ecological parameters and their relationships with environmental factors constrained by satellite and in-situ observations. Our model unifies top-down and bottom-up observational constraints with process-based knowledge to generate a global analysis of ecological functions and their adaptation to environmental gradients. We found PFTs account for less than half of the explainable spatial parameter variations controlling carbon fluxes and vegetation states. The remaining parameter variability is largely driven by local climate and forest demography factors, and the learned environment-parameter relationships lead to enhanced spatial generalization at unseen locations. DifferLand identified growing season length, leaf economics, and agricultural intensity as the three orthogonal spatial gradients underlying parameter variations. Our novel framework can lead to new insights on global carbon cycling by learning directly from data and expanding our understanding of local responses of ecosystems to environmental drivers.
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- 2024
9. Inelastic Triatom-Atom Quantum Close-Coupling Dynamics in Full Dimensionality: all rovibrational mode quenching of water due to H impact on a six-dimensional potential energy surface
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Yang, Benhui, Qu, Chen, Bowman, J. M., Yang, Dongzheng, Guo, Hua, Balakrishnan, N., Forrey, R. C., and Stancil, P. C.
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Astrophysics - Astrophysics of Galaxies - Abstract
The rovibrational level populations, and subsequent emission in various astrophysical environments, is driven by inelastic collision processes. The available rovibrational rate coefficients for water have been calculated using a number of approximations. We present a numerically exact calculation for the rovibrational quenching for all water vibrational modes due to collisions with atomic hydrogen. The scattering theory implements a quantum close-coupling (CC) method on a high level ab initio six-dimensional (6D) potential energy surface (PES). Total rovibrational quenching cross sections for excited bending levels were compared with earlier results on a 4D PES with the rigid-bender close-coupling (RBCC) approximation. General agreement between 6D-CC and 4D-RBCC calculations are found, but differences are evident including the energy and amplitude of low-energy orbiting resonances. Quenching cross sections from the symmetric and asymmetric stretch modes are provided for the first time. The current 6D-CC calculation provides accurate inelastic data needed for astrophysical modeling., Comment: 20 pages, 5 figures
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- 2024
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10. Towards Context-Aware Adaptation in Extended Reality: A Design Space for XR Interfaces and an Adaptive Placement Strategy
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Davari, Shakiba and Bowman, Doug A.
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Computer Science - Human-Computer Interaction ,Computer Science - Computers and Society ,Computer Science - Graphics ,Computer Science - Information Retrieval ,Computer Science - Multimedia - Abstract
By converting the entire 3D space around the user into a screen, Extended Reality (XR) can ameliorate traditional displays' space limitations and facilitate the consumption of multiple pieces of information at a time. However, if designed inappropriately, these XR interfaces can overwhelm the user and complicate information access. In this work, we explored the design dimensions that can be adapted to enable suitable presentation and interaction within an XR interface. To investigate a specific use case of context-aware adaptations within our proposed design space, we concentrated on the spatial layout of the XR content and investigated non-adaptive and adaptive placement strategies. In this paper, we (1) present a comprehensive design space for XR interfaces, (2) propose Environment-referenced, an adaptive placement strategy that uses a relevant intermediary from the environment within a Hybrid Frame of Reference (FoR) for each XR object, and (3) evaluate the effectiveness of this adaptive placement strategy and a non-adaptive Body-Fixed placement strategy in four contextual scenarios varying in terms of social setting and user mobility in the environment. The performance of these placement strategies from our within-subjects user study emphasized the importance of intermediaries' relevance to the user's focus. These findings underscore the importance of context-aware interfaces, indicating that the appropriate use of an adaptive content placement strategy in a context can significantly improve task efficiency, accuracy, and usability.
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- 2024
11. Towards Intelligent Augmented Reality (iAR): A Taxonomy of Context, an Architecture for iAR, and an Empirical Study
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Davari, Shakiba, Stover, Daniel, Giovannelli, Alexander, Ilo, Cory, and Bowman, Doug A.
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Computer Science - Human-Computer Interaction ,Computer Science - Artificial Intelligence ,Computer Science - Computers and Society ,Computer Science - Emerging Technologies ,Computer Science - Machine Learning - Abstract
Recent advancements in Augmented Reality (AR) research have highlighted the critical role of context awareness in enhancing interface effectiveness and user experience. This underscores the need for intelligent AR (iAR) interfaces that dynamically adapt across various contexts to provide optimal experiences. In this paper, we (a) propose a comprehensive framework for context-aware inference and adaptation in iAR, (b) introduce a taxonomy that describes context through quantifiable input data, and (c) present an architecture that outlines the implementation of our proposed framework and taxonomy within iAR. Additionally, we present an empirical AR experiment to observe user behavior and record user performance, context, and user-specified adaptations to the AR interfaces within a context-switching scenario. We (d) explore the nuanced relationships between context and user adaptations in this scenario and discuss the significance of our framework in identifying these patterns. This experiment emphasizes the significance of context-awareness in iAR and provides a preliminary training dataset for this specific Scenario.
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- 2024
12. Sabotage Evaluations for Frontier Models
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Benton, Joe, Wagner, Misha, Christiansen, Eric, Anil, Cem, Perez, Ethan, Srivastav, Jai, Durmus, Esin, Ganguli, Deep, Kravec, Shauna, Shlegeris, Buck, Kaplan, Jared, Karnofsky, Holden, Hubinger, Evan, Grosse, Roger, Bowman, Samuel R., and Duvenaud, David
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Computer Science - Machine Learning ,Computer Science - Artificial Intelligence ,Computer Science - Computers and Society - Abstract
Sufficiently capable models could subvert human oversight and decision-making in important contexts. For example, in the context of AI development, models could covertly sabotage efforts to evaluate their own dangerous capabilities, to monitor their behavior, or to make decisions about their deployment. We refer to this family of abilities as sabotage capabilities. We develop a set of related threat models and evaluations. These evaluations are designed to provide evidence that a given model, operating under a given set of mitigations, could not successfully sabotage a frontier model developer or other large organization's activities in any of these ways. We demonstrate these evaluations on Anthropic's Claude 3 Opus and Claude 3.5 Sonnet models. Our results suggest that for these models, minimal mitigations are currently sufficient to address sabotage risks, but that more realistic evaluations and stronger mitigations seem likely to be necessary soon as capabilities improve. We also survey related evaluations we tried and abandoned. Finally, we discuss the advantages of mitigation-aware capability evaluations, and of simulating large-scale deployments using small-scale statistics.
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- 2024
13. OReole-FM: successes and challenges toward billion-parameter foundation models for high-resolution satellite imagery
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Dias, Philipe, Tsaris, Aristeidis, Bowman, Jordan, Potnis, Abhishek, Arndt, Jacob, Yang, H. Lexie, and Lunga, Dalton
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Computer Science - Computer Vision and Pattern Recognition ,Computer Science - Artificial Intelligence ,Computer Science - Distributed, Parallel, and Cluster Computing - Abstract
While the pretraining of Foundation Models (FMs) for remote sensing (RS) imagery is on the rise, models remain restricted to a few hundred million parameters. Scaling models to billions of parameters has been shown to yield unprecedented benefits including emergent abilities, but requires data scaling and computing resources typically not available outside industry R&D labs. In this work, we pair high-performance computing resources including Frontier supercomputer, America's first exascale system, and high-resolution optical RS data to pretrain billion-scale FMs. Our study assesses performance of different pretrained variants of vision Transformers across image classification, semantic segmentation and object detection benchmarks, which highlight the importance of data scaling for effective model scaling. Moreover, we discuss construction of a novel TIU pretraining dataset, model initialization, with data and pretrained models intended for public release. By discussing technical challenges and details often lacking in the related literature, this work is intended to offer best practices to the geospatial community toward efficient training and benchmarking of larger FMs.
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- 2024
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14. Considerations and recommendations from the ISMRM Diffusion Study Group for preclinical diffusion MRI: Part 3 -- Ex vivo imaging: data processing, comparisons with microscopy, and tractography
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Schilling, Kurt G, Howard, Amy FD, Grussu, Francesco, Ianus, Andrada, Hansen, Brian, Barrett, Rachel L C, Aggarwal, Manisha, Michielse, Stijn, Nasrallah, Fatima, Syeda, Warda, Wang, Nian, Veraart, Jelle, Roebroeck, Alard, Bagdasarian, Andrew F, Eichner, Cornelius, Sepehrband, Farshid, Zimmermann, Jan, Soustelle, Lucas, Bowman, Christien, Tendler, Benjamin C, Hertanu, Andreea, Jeurissen, Ben, Verhoye, Marleen, Frydman, Lucio, van de Looij, Yohan, Hike, David, Dunn, Jeff F, Miller, Karla, Landman, Bennett A, Shemesh, Noam, Anderson, Adam, McKinnon, Emilie, Farquharson, Shawna, Acqua, Flavio Dell', Pierpaoli, Carlo, Drobnjak, Ivana, Leemans, Alexander, Harkins, Kevin D, Descoteaux, Maxime, Xu, Duan, Huang, Hao, Santin, Mathieu D, Grant, Samuel C., Obenaus, Andre, Kim, Gene S, Wu, Dan, Bihan, Denis Le, Blackband, Stephen J, Ciobanu, Luisa, Fieremans, Els, Bai, Ruiliang, Leergaard, Trygve B, Zhang, Jiangyang, Dyrby, Tim B, Johnson, G Allan, Cohen-Adad, Julien, Budde, Matthew D, and Jelescu, Ileana O
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Physics - Medical Physics - Abstract
Preclinical diffusion MRI (dMRI) has proven value in methods development and validation, characterizing the biological basis of diffusion phenomena, and comparative anatomy. While dMRI enables in vivo non-invasive characterization of tissue, ex vivo dMRI is increasingly being used to probe tissue microstructure and brain connectivity. Ex vivo dMRI has several experimental advantages that facilitate high spatial resolution and high signal-to-noise ratio (SNR) images, cutting-edge diffusion contrasts, and direct comparison with histological data as a methodological validation. However, there are a number of considerations that must be made when performing ex vivo experiments. The steps from tissue preparation, image acquisition and processing, and interpretation of results are complex, with many decisions that not only differ dramatically from in vivo imaging of small animals, but ultimately affect what questions can be answered using the data. This work concludes a 3-part series of recommendations and considerations for preclinical dMRI. Herein, we describe best practices for dMRI of ex vivo tissue, with a focus on image pre-processing, data processing and model fitting, and tractography. In each section, we attempt to provide guidelines and recommendations, but also highlight areas for which no guidelines exist (and why), and where future work should lie. We end by providing guidelines on code sharing and data sharing, and point towards open-source software and databases specific to small animal and ex vivo imaging., Comment: Part 3 of 3 in "Considerations and recommendations for preclinical diffusion MRI"
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- 2024
15. Voice-Enabled AI Agents can Perform Common Scams
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Fang, Richard, Bowman, Dylan, and Kang, Daniel
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Computer Science - Artificial Intelligence - Abstract
Recent advances in multi-modal, highly capable LLMs have enabled voice-enabled AI agents. These agents are enabling new applications, such as voice-enabled autonomous customer service. However, with all AI capabilities, these new capabilities have the potential for dual use. In this work, we show that voice-enabled AI agents can perform the actions necessary to perform common scams. To do so, we select a list of common scams collected by the government and construct voice-enabled agents with directions to perform these scams. We conduct experiments on our voice-enabled agents and show that they can indeed perform the actions necessary to autonomously perform such scams. Our results raise questions around the widespread deployment of voice-enabled AI agents.
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- 2024
16. Photometric detection of internal gravity waves in upper main-sequence stars. IV. Comparable stochastic low-frequency variability in SMC, LMC, and Galactic massive stars
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Bowman, Dominic M., Van Daele, Pieterjan, Michielsen, Mathias, and Van Reeth, Timothy
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
Massive main-sequence stars have convective cores and radiative envelopes, but also sub-surface convection zones caused by partial ionisation. However, the convective properties depend on opacity and a star's metallicity. Non-rotating 1D evolution models of main-sequence stars with the metallicity of the SMC suggest tenuous sub-surface convection zones using the Rayleigh number as a criterion for convection owing to their lower metallicity. We test whether massive stars of different metallicities both inside and outside of asteroseismically calibrated stability windows for sub-surface convection exhibit different properties in stochastic low-frequency (SLF) variability. We extracted customised light curves from the TESS mission for a sample of massive stars using an effective point spread function (ePSF) method, and compared their morphologies in terms of characteristic frequency and amplitude using a Gaussian process (GP) regression methodology. We demonstrate that the properties of SLF variability are generally consistent across the metallicity range from the Milky Way down to the SMC, for stars both inside and outside of the sub-surface stability windows. We conclude that non-rotating 1D stellar structure models cannot alone be used to explain SLF variability in light curves of massive stars. The similar properties of SLF variability across a range of metallicity values, which follow the same trends in mass and age in the HR diagram at both high and low metallicity, support a transition in the dominant mechanism causing SLF variability from younger to more evolved stars. Specifically, core-excited internal gravity waves (IGWs) are favoured for younger stars lacking sub-surface convection zones, especially at low metallicity, and sub-surface convection zones are favoured for more evolved massive stars. (abstract abridged for arXiv), Comment: Accepted and in press, A&A (https://doi.org/10.1051/0004-6361/202451419)
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- 2024
17. Phase-Space Propagator for Partially Coherent Wave Fields in the Spatial Domain
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Rogers, Jake J., Tran, Chanh Q., Kirk, Tony, Di Pasquale, Paul, Dao, Hong Minh, and Bowman, Pierce
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Physics - Optics ,Physics - Computational Physics - Abstract
The propagation of wave fields and their interactions with matter are important for established and emerging fields in optical sciences. Efficient methods for predicting such behaviour have been employed routinely for coherent sources. However, most real world optical systems exhibit partial coherence, for which the present mathematical description involves high dimensional complex functions and hence poses challenges for numerical implementations. This demands significant computational resources to determine the properties of partially coherent wavefields. Here, we describe the novel Phase-Space (PS) propagator, an efficient and self-consistent technique for free space propagation of wave fields which are partially coherent in the spatial domain. The PS propagator makes use of the fact that the propagation of a wave field in free space is equivalent to a shearing of the corresponding PSD function. Computationally, this approach is simpler and the need for using different propagation methods for near and far-field regions is removed., Comment: 17 pages, 4 figures, to be submitted to Optics Communications For the associated Python package, see https://github.com/jakerogers-1/Phase-Space-Propagator
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- 2024
18. Asteroseismology
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Bowman, Dominic M. and Bugnet, Lisa
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Astrophysics - Solar and Stellar Astrophysics - Abstract
Asteroseismology is the study of the interior physics and structure of stars using their pulsations. It is applicable to stars across the Hertzsprung-Russell (HR) diagram and a powerful technique to measure masses, radii and ages, but also directly constrain interior rotation, chemical mixing, and magnetism. This is because a star's self-excited pulsation modes are sensitive to its structure. Asteroseismology generally requires long-duration and high-precision time series data. The method of forward asteroseismic modelling, which is the statistical comparison of observed pulsation mode frequencies to theoretically predicted pulsation frequencies calculated from a grid of models, provides precise constraints for calibrating various transport phenomena. In this introduction to asteroseismology, we provide an overview of its principles, and the typical data sets and methodologies used to constrain stellar interiors. Finally, we present key highlights of asteroseismic results from across the HR diagram, and conclude with ongoing challenges and future prospects for this ever-expanding field within stellar astrophysics., Comment: 21 pages; This is a pre-print of an invited chapter for the Encyclopedia of Astrophysics (edited by I. Mandel, section editor F.R.N. Schneider) to be published by Elsevier as a Reference Module
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- 2024
19. 2D electron density profile evolution during detachment in Super-X divertor L-mode discharges on MAST-U
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Lonigro, N., Doyle, R. S., Verhaegh, K., Lipschultz, B., Moulton, D., Ryan, P., Allcock, J. S., Bowman, C., Harrison, J., Silburn, S., Theiler, C., Wijkamp, T. A., Team, the WPTE, and Team, MAST-U
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Physics - Plasma Physics - Abstract
2D electron density profiles obtained from coherence imaging spectroscopy in different MAST-U divertor conditions are compared. The data includes variations of strike point position, core electron density, and heating power. The improved performance of the long-legged divertors results in a lower electron density and particle flux at the target compared to configurations with smaller strike point major radius, while also being characterized by lower temperatures and deeper detachment. Comparisons against SOLPS simulations generally show good agreement in profile shape along and across the separatrix. The peaking of the electron density downstream of the detachment front is associated with significant neutral drag acting on the plasma flow.
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- 2024
20. Design and Implementation of the ESSA Resource Allocation Review: Lessons Learned in Utah
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Region 15 Comprehensive Center, WestEd, Tia Taylor, and Alicia Bowman
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The provisions in the Every Student Succeeds Act (ESSA) reauthorization of the Elementary and Secondary Education Act (ESEA) include (1) the requirement for states to periodically review resource allocation in local education agencies (LEAs) serving a significant number of schools identified for comprehensive support and improvement (CSI), targeted support and improvement (TSI), and additional targeted support and improvement (ATSI) and (2) the requirement that CSI and ATSI plans both identify and address local resource inequities. ESSA requires states to periodically review resource allocation to support school improvement in schools that qualify for comprehensive and targeted support. In 2019, the Resource Allocation Review Community of Practice (RAR CoP) of the United States Department of Education (the Department) provided a useful foundation. The RAR CoP calls upon state agencies to connect the additional resource inequity provisions outlined in ESSA and align resource allocation reviews with the comprehensive school improvement. Building on the guidance offered by the RAR CoP, Utah, with the support of WestEd's Region 15 Comprehensive Center (R15CC), was among the first states to design and implement an RAR process. This report shares some discoveries and lessons learned during the design and implementation process.
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- 2024
21. Identifying Resource Inequities
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Region 15 Comprehensive Center, WestEd, Tia Taylor, and Alicia Bowman
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This document provides state education agency (SEA) leaders with a systematized approach to identifying and defining elements, major tasks, and deliverables for conducting a meaningful resource allocation review (RAR). Based on the findings of an intensive four-year design process, field research, and recommendations from the pilot audit of the RAR process conducted by the U.S. Department of Education, this document: (1) offers education leaders at the state and local level with concrete examples of resource inequities; (2) presents considerations for decision-making around resources, and (3) proposes ways to reduce the burden on LEAs and schools by streamlining the RAR completion process.
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- 2024
22. Universal Design and K-12 Academic Assessments: A Scoping Review of the Literature. NCEO Report 442
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National Center on Educational Outcomes (NCEO), Council of Chief State School Officers (CCSSO), Applied Engineering Management Corporation (AEM), Center for Parent Information & Resources (CPIR), National Association of State Directors of Special Education (NASDSE), WestEd, Kristin K. Liu, Martha L. Thurlow, Mari Quanbeck, Jessica A. Bowman, and Amy Riegelman
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This report summarizes an investigation of literature published in 1985-2023 on universal design (UD) of large-scale assessments. State education agencies, K-12 assessment vendors, teacher trainers, and classroom teachers are increasingly applying the principles of UD to the instruction and assessment of students from special populations. In theory, UD ensures that instruction and assessment are created from the beginning to be accessible to the widest population of students possible. Yet, it is unclear how these UD frameworks and their associated principles and elements are being applied, or even which UD framework is used. This obscurity and lack of defined UD principles in the research literature creates obstacles in research replication and in identification of evidence-based practices. This scoping review identifies how the concept of UD has been applied to the broad range of U.S. district and state large-scale academic assessments. We included literature on the application of UD to the broad range of K-12 district and state large-scale academic assessments in the U.S.
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- 2024
23. Neural Correlates of Preschoolers' Passive-Viewing False Belief: Insights into Continuity and Change and the Function of Right Temporoparietal Activity in Theory of Mind Development
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Lindsay C. Bowman and Amanda C. Brandone
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Behavioral research demonstrates a critical transition in preschooler's mental-state understanding (i.e., theory of mind; ToM), revealed most starkly in performance on tasks about a character's false belief (e.g., about an object's location). Questions remain regarding the neural and cognitive processes differentiating children who pass versus fail behavioral false-belief tasks and the extent to which there is continuity versus change in the ToM neural network. To address these questions, we analyzed event-related spectral power in the electroencephalogram (EEG) to investigate how preschoolers' neural activity during passive viewing of false-belief scenarios related to their explicit behavioral ToM performance. We found that neural activity during passive viewing of false-belief events (6-9 Hz EEG 'alpha' suppression in right temporoparietal [RTP] electrodes) strongly related to children's explicit ToM. However, children's RTP alpha suppression differed depending on their explicit behavioral ToM performance: Children who did better on a broad battery of standard ToM tasks and who passed explicit behavioral false-belief tasks showed greater RTP alpha suppression when the character's belief first became false (during the 'location-change' event); whereas children who did worse on the ToM battery and who failed explicit behavioral false-belief tasks showed greater RTP alpha suppression only later when they could evaluate the character's behavior in the context of prior events (during the 'active-search' event). Findings shed light on what differentiates preschoolers who pass versus fail explicit false-belief tasks and raise questions about how to interpret existing neuroscience data from ToM tasks across infancy to adulthood.
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- 2024
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24. Differences in code status practice patterns among emergency clinicians working in Japan and the United States
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Numata, Kenji, Fujitani, Shigeki, Funakoshi, Hiraku, Yoshida, Minoru, Nomura, Yu, Tanii, Rimi, Takemura, Narihide, Bowman, Jason, Lakin, Joshua R, Higuchi, Masaya, Liu, Shan W, Kennedy, Maura, Tulsky, James A, Neville, Thanh H, and Ouchi, Kei
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Health Services and Systems ,Health Sciences ,Lung ,Cancer ,Code status communication ,Emergency care ,End -of -life care ,Palliative care ,Nurse practitioner ,International ,End-of-life care ,Medical and Health Sciences ,Psychology and Cognitive Sciences ,Public Health ,Health services and systems - Abstract
ObjectiveThis study aimed to examine self-reported code-status practice patterns among emergency clinicians from Japan and the U.S.MethodsA cross-sectional questionnaire was distributed to emergency clinicians from one academic medical center and four general hospitals in Japan and two academic medical centers in the U.S. The questionnaire was based on a hypothetical case involving a critically ill patient with end-stage lung cancer. The questionnaire items assessed whether respondent clinicians would be likely to pose questions to patients about their preferences for medical procedures and their values and goals.ResultsA total of 176 emergency clinicians from Japan and the U.S participated. After adjusting for participants' backgrounds, emergency clinicians in Japan were less likely to pose procedure-based questions than those in the U.S. Conversely, emergency clinicians in Japan showed a statistically higher likelihood of asking 10 out of 12 value-based questions.ConclusionSignificant differences were found between emergency clinicians in Japan and the U.S. in their reported practices on posing procedure-based and patient value-based questions.Practice implicationsSerious illness communication training based in the U.S. must be adapted to the Japanese context, considering the cultural characteristics and practical responsibilities of Japanese emergency clinicians.
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- 2024
25. Use of Recycled Asphalt Pavement in Rubberized Hot Mix Asphalt—Gap Graded
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Mateos, Angel, Harvey, John, Wu, Rongzong, Buscheck, Jeff, Butt, Ali, Guada, Irwin, Bowman, Michael, Rahman, Mohammad, Brotschi, Julian, and Yu, Justin
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asphalt overlay ,rubberized hot mix asphalt–gap-graded (RHMA-G) ,crumb rubber modifier ,reclaimed asphalt pavement (RAP) - Abstract
Current Caltrans Standard Specifications for rubberized hot mix asphalt–gap-graded (RHMA-G) do not allow the inclusion of reclaimed asphalt pavement (RAP). This report summarizes the research conducted by the UCPRC in support of the Caltrans-industry initiative “10% RAP in RHMA-G,” whose goal is to evaluate the use of up to 10% RAP (by aggregate replacement) in RHMA-G mixes, provided that the research does not identify significant potential problems for durability. Five pilot projects were built by Caltrans as part the initiative. In each of the pilots, a control RHMA-G (without RAP) and an RHMA-G with 10% RAP were placed. The mixes were sampled during production and tested using performance-related tests at the UCPRC laboratory. The results of the testing of the mixes—including stiffness, four-point bending fatigue resistance, and rutting resistance—indicate that the addition of 10% RAP had minor effects on the mechanical properties of the RHMA-G. With just a few exceptions related to changes in the total binder content of the mix, the effect of the RAP addition was negligible compared with project-to-project differences. Modeling with CalME software based on four-point bending testing results indicated that the impact of the RAP addition on the cracking performance of the pavement was either negligible or comparable to project-to-project differences. From the constructability point of view, the addition of the RAP did not create any problems. The life cycle assessment presented in this report indicates that the addition of 10% RAP to the RHMA-G can reduce the greenhouse gasses emissions associated with the RHMA-G production (cradle-to-gate) by up to 5%.
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- 2024
26. Language Models Learn to Mislead Humans via RLHF
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Wen, Jiaxin, Zhong, Ruiqi, Khan, Akbir, Perez, Ethan, Steinhardt, Jacob, Huang, Minlie, Bowman, Samuel R., He, He, and Feng, Shi
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Computer Science - Computation and Language - Abstract
Language models (LMs) can produce errors that are hard to detect for humans, especially when the task is complex. RLHF, the most popular post-training method, may exacerbate this problem: to achieve higher rewards, LMs might get better at convincing humans that they are right even when they are wrong. We study this phenomenon under a standard RLHF pipeline, calling it "U-SOPHISTRY" since it is Unintended by model developers. Specifically, we ask time-constrained (e.g., 3-10 minutes) human subjects to evaluate the correctness of model outputs and calculate humans' accuracy against gold labels. On a question-answering task (QuALITY) and programming task (APPS), RLHF makes LMs better at convincing our subjects but not at completing the task correctly. RLHF also makes the model harder to evaluate: our subjects' false positive rate increases by 24.1% on QuALITY and 18.3% on APPS. Finally, we show that probing, a state-of-the-art approach for detecting Intended Sophistry (e.g. backdoored LMs), does not generalize to U-SOPHISTRY. Our results highlight an important failure mode of RLHF and call for more research in assisting humans to align them.
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- 2024
27. Working in Extended Reality in the Wild: Worker and Bystander Experiences of XR Virtual Displays in Real-World Settings
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Pavanatto, Leonardo, Biener, Verena, Chandran, Jennifer, Kalamkar, Snehanjali, Lu, Feiyu, Dudley, John J., Hu, Jinghui, Ramirez-Saffy, G. Nikki, Kristensson, Per Ola, Giovannelli, Alexander, Schlueter, Luke, Müller, Jörg, Grubert, Jens, and Bowman, Doug A.
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Computer Science - Human-Computer Interaction - Abstract
Although access to sufficient screen space is crucial to knowledge work, workers often find themselves with limited access to display infrastructure in remote or public settings. While virtual displays can be used to extend the available screen space through extended reality (XR) head-worn displays (HWD), we must better understand the implications of working with them in public settings from both users' and bystanders' viewpoints. To this end, we conducted two user studies. We first explored the usage of a hybrid AR display across real-world settings and tasks. We focused on how users take advantage of virtual displays and what social and environmental factors impact their usage of the system. A second study investigated the differences between working with a laptop, an AR system, or a VR system in public. We focused on a single location and participants performed a predefined task to enable direct comparisons between the conditions while also gathering data from bystanders. The combined results suggest a positive acceptance of XR technology in public settings and show that virtual displays can be used to accompany existing devices. We highlighted some environmental and social factors. We saw that previous XR experience and personality can influence how people perceive the use of XR in public. In addition, we confirmed that using XR in public still makes users stand out and that bystanders are curious about the devices, yet have no clear understanding of how they can be used., Comment: arXiv admin note: substantial text overlap with arXiv:2310.09786
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- 2024
28. Can We Learn the Energy of Sublimation of Ice from Water Clusters?
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Bowman, Joe, Yu, Qi, Qu, Chen, Houston, Paul, and Conte, Riccardo
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Physics - Chemical Physics - Abstract
This short paper reports a study of the electronic dissociation energies, De, of water clusters from direct ab initio (mostly CCSD(T)) calculations and the q-AQUA and MB-pol potentials. These clusters range in size from 6-25 monomers. These are all in very good agreement with each other, as shown in a recent Perspective by Herman and Xantheas. To the best of our knowledge, we present for the first time results for the De per monomer. To our surprise this quantity appears to be converging to a value close to 12 kcal/mol. An estimate of 1.5 - 2 kcal/mol for the {\Delta}ZPE for these clusters puts the value of D0 at 10 to 10.5 kcal/mol. This value is remarkably (and probably fortuitously) close to the reported sublimation enthalpy of 10.2 kcal/mol at 10 K. However, given that these De energies correspond to dissociation of the cluster to N isolated monomers the interpretation of ``vaporization" of these ``solid" clusters is qualitatively reasonable., Comment: 7 pages 2 figures. Working draft
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- 2024
29. In situ Etching of \b{eta}-Ga2O3 using tert-Butyl Chloride in an MOCVD System
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Gorsak, Cameron A., Bowman, Henry J., Gann, Katie R., Smith, Kathleen T., Steele, Jacob, Jena, Debdeep, Schlom, Darrell G., Huili, Xing, Thompson, Michael O., and Nair, Hari P.
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Condensed Matter - Materials Science - Abstract
In this study, we investigate in situ etching of \b{eta}-Ga2O3 in a metal-organic chemical vapor deposition (MOCVD) system using tert-Butyl chloride (TBCl). We report the successful etching of both heteroepitaxial (-201)-oriented and homoepitaxial (010)-oriented \b{eta}-Ga2O3 films over a wide range of substrate temperature, TBCl molar flows, and reactor pressures. We identify that the likely etchant is HCl (g) formed by the pyrolysis of TBCl in the hydrodynamic boundary layer above the substrate. The temperature dependence of the etch rate reveals two distinct regimes characterized by markedly different apparent activation energies. The extracted apparent activation energies suggest that at temperatures below ~800 {\deg}C the etch rate is likely limited by desorption of etch products, while at higher substrate temperatures chemisorption of HCl limits the etch rate. The relative etch rates of heteroepitaxial (-201) and homoepitaxial (010) \b{eta}-Ga2O3 were observed to scale by the ratio of the surface energies indicating an anisotropic etch. For (010) homoepitaxial films, relatively smooth post-etch surface morphology was achieved by tuning the etching parameters., Comment: 12 pages, 8 figures
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- 2024
30. Real-time Dexterous Telemanipulation with an End-Effect-Oriented Learning-based Approach
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Wang, Haoyang, Bai, He, Zhang, Xiaoli, Jung, Yunsik, Bowman, Michel, and Tao, Lingfeng
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Computer Science - Robotics - Abstract
Dexterous telemanipulation is crucial in advancing human-robot systems, especially in tasks requiring precise and safe manipulation. However, it faces significant challenges due to the physical differences between human and robotic hands, the dynamic interaction with objects, and the indirect control and perception of the remote environment. Current approaches predominantly focus on mapping the human hand onto robotic counterparts to replicate motions, which exhibits a critical oversight: it often neglects the physical interaction with objects and relegates the interaction burden to the human to adapt and make laborious adjustments in response to the indirect and counter-intuitive observation of the remote environment. This work develops an End-Effects-Oriented Learning-based Dexterous Telemanipulation (EFOLD) framework to address telemanipulation tasks. EFOLD models telemanipulation as a Markov Game, introducing multiple end-effect features to interpret the human operator's commands during interaction with objects. These features are used by a Deep Reinforcement Learning policy to control the robot and reproduce such end effects. EFOLD was evaluated with real human subjects and two end-effect extraction methods for controlling a virtual Shadow Robot Hand in telemanipulation tasks. EFOLD achieved real-time control capability with low command following latency (delay<0.11s) and highly accurate tracking (MSE<0.084 rad)., Comment: Accepted by IROS 2024
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- 2024
31. Mitigating calibration errors from mutual coupling with time-domain filtering of 21 cm cosmological radio observations
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Charles, N., Kern, N. S., Pascua, R., Bernardi, G., Bester, L., Smirnov, O., Acedo, E. d. L., Abdurashidova, Z., Adams, T., Aguirre, J. E., Baartman, R., Beardsley, A. P., Berkhout, L. M., Billings, T. S., Bowman, J. D., Bull, P., Burba, J., Byrne, R., Carey, S., Chen, K., Choudhuri, S., Cox, T., DeBoer, D. R., Dexter, M., Dillon, J. S., Dynes, S., Eksteen, N., Ely, J., Ewall-Wice, A., Fritz, R., Furlanetto, S. R., Gale-Sides, K., Garsden, H., Gehlot, B. K., Ghosh, A., Gorce, A., Gorthi, D., Halday, Z., Hazelton, B. J., Hewitt, J. N., Hickish, J., Huang, T., Jacobs, D. C., Josaitis, A., Kerrigan, J., Kittiwisit, P., Kolopanis, M., Lanman, A., Liu, A., Ma, Y. -Z., MacMahon, D. H. E., Malan, L., Malgas, K., Malgas, C., Marero, B., Martinot, Z. E., McBride, L., Mesinger, A., Mohamed-Hinds, N., Molewa, M., Morales, M. F., Murray, S., Nikolic, B., Nuwegeld, H., Parsons, A. R., Patra, N., Plante, P. L., Qin, Y., Rath, E., Razavi-Ghods, N., Riley, D., Robnett, J., Rosie, K., Santos, M. G., Sims, P., Singh, S., Storer, D., Swarts, H., Tan, J., Wilensky, M. J., Williams, P. K. G., Wyngaarden, P. v., and Zheng, H.
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Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
The 21 cm transition from neutral Hydrogen promises to be the best observational probe of the Epoch of Reionisation (EoR). This has led to the construction of low-frequency radio interferometric arrays, such as the Hydrogen Epoch of Reionization Array (HERA), aimed at systematically mapping this emission for the first time. Precision calibration, however, is a requirement in 21 cm radio observations. Due to the spatial compactness of HERA, the array is prone to the effects of mutual coupling, which inevitably lead to non-smooth calibration errors that contaminate the data. When unsmooth gains are used in calibration, intrinsically spectrally-smooth foreground emission begins to contaminate the data in a way that can prohibit a clean detection of the cosmological EoR signal. In this paper, we show that the effects of mutual coupling on calibration quality can be reduced by applying custom time-domain filters to the data prior to calibration. We find that more robust calibration solutions are derived when filtering in this way, which reduces the observed foreground power leakage. Specifically, we find a reduction of foreground power leakage by 2 orders of magnitude at k=0.5.
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- 2024
32. $\Delta$-Machine Learning to Elevate DFT-based Potentials and a Force Field to the CCSD(T) Level Illustrated for Ethanol
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Nandi, Apurba, Pandey, Priyanka, Houston, Paul L., Qu, Chen, Yu, Qi, Conte, Riccardo, Tkatchenko, Alexandre, and Bowman, Joel M.
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Physics - Chemical Physics - Abstract
Progress in machine learning has facilitated the development of potentials that offer both the accuracy of first-principles techniques and vast increases in the speed of evaluation. Recently,"$\Delta$-machine learning" has been used to elevate the quality of a potential energy surface (PES) based on low-level, e.g., density functional theory (DFT) energies and gradients to close to the gold-standard coupled cluster level of accuracy. We have demonstrated the success of this approach for molecules, ranging in size from H$_3$O$^+$ to 15-atom acetyl-acetone and tropolone. These were all done using the B3LYP functional. Here we investigate the generality of this approach for the PBE, M06, M06-2X, and PBE0+MBD functionals, using ethanol as the example molecule. Linear regression with permutationally invariant polynomials is used to fit both low-level and correction PESs. These PESs are employed for standard RMSE analysis for training and test datasets, and then general fidelity tests such as energetics of stationary points, normal mode frequencies, and torsional potentials are examined. We achieve similar improvements in all cases. Interestingly, we obtained significant improvement over DFT gradients where coupled cluster gradients were not used to correct the low-level PES. Finally, we present some results for correcting a recent molecular mechanics force field for ethanol and comment on the possible generality of this approach.
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- 2024
33. The need to implement FAIR principles in biomolecular simulations
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Amaro, Rommie, Åqvist, Johan, Bahar, Ivet, Battistini, Federica, Bellaiche, Adam, Beltran, Daniel, Biggin, Philip C., Bonomi, Massimiliano, Bowman, Gregory R., Bryce, Richard, Bussi, Giovanni, Carloni, Paolo, Case, David, Cavalli, Andrea, Chang, Chie-En A., Cheatham III, Thomas E., Cheung, Margaret S., Chipot, Cris, Chong, Lillian T., Choudhary, Preeti, Cisneros, Gerardo Andres, Clementi, Cecilia, Collepardo-Guevara, Rosana, Coveney, Peter, Covino, Roberto, Crawford, T. Daniel, Peraro, Matteo Dal, de Groot, Bert, Delemotte, Lucie, De Vivo, Marco, Essex, Jonathan, Fraternali, Franca, Gao, Jiali, Gelpí, Josep Lluís, Gervasio, Francesco Luigi, Gonzalez-Nilo, Fernando Danilo, Grubmüller, Helmut, Guenza, Marina, Guzman, Horacio V., Harris, Sarah, Head-Gordon, Teresa, Hernandez, Rigoberto, Hospital, Adam, Huang, Niu, Huang, Xuhui, Hummer, Gerhard, Iglesias-Fernández, Javier, Jensen, Jan H., Jha, Shantenu, Jiao, Wanting, Jorgensen, William L., Kamerlin, Shina Caroline Lynn, Khalid, Syma, Laughton, Charles, Levitt, Michael, Limongelli, Vittorio, Lindahl, Erik, Lindorff-Larsen, Kresten, Loverde, Sharon, Lundborg, Magnus, Luo, Yun Lyna, Luque, Francisco Javier, Lynch, Charlotte I., MacKerell, Alexander, Magistrato, Alessandra, Marrink, Siewert J., Martin, Hugh, McCammon, J. Andrew, Merz, Kenneth, Moliner, Vicent, Mulholland, Adrian, Murad, Sohail, Naganathan, Athi N., Nangia, Shikha, Noe, Frank, Noy, Agnes, Oláh, Julianna, O'Mara, Megan, Ondrechen, Mary Jo, Onuchic, José N., Onufriev, Alexey, Osuna, Silvia, Panchenko, Anna R., Pantano, Sergio, Parish, Carol, Parrinello, Michele, Perez, Alberto, Perez-Acle, Tomas, Perilla, Juan R., Pettitt, B. Montgomery, Pietropalo, Adriana, Piquemal, Jean-Philip, Poma, Adolfo, Praprotnik, Matej, Ramos, Maria J., Ren, Pengyu, Reuter, Nathalie, Roitberg, Adrian, Rosta, Edina, Rovira, Carme, Roux, Benoit, Röthlisberger, Ursula, Sanbonmatsu, Karissa Y., Schlick, Tamar, Shaytan, Alexey K., Simmerling, Carlos, Smith, Jeremy C., Sugita, Yuji, Świderek, Katarzyna, Taiji, Makoto, Tao, Peng, Tikhonova, Irina G., Tirado-Rives, Julian, Tunón, Inaki, Van Der Kamp, Marc W., Van der Spoel, David, Velankar, Sameer, Voth, Gregory A., Wade, Rebecca, Warshel, Ariel, Welborn, Valerie Vaissier, Wetmore, Stacey, Wong, Chung F., Yang, Lee-Wei, Zacharias, Martin, and Orozco, Modesto
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Quantitative Biology - Biomolecules - Abstract
This letter illustrates the opinion of the molecular dynamics (MD) community on the need to adopt a new FAIR paradigm for the use of molecular simulations. It highlights the necessity of a collaborative effort to create, establish, and sustain a database that allows findability, accessibility, interoperability, and reusability of molecular dynamics simulation data. Such a development would democratize the field and significantly improve the impact of MD simulations on life science research. This will transform our working paradigm, pushing the field to a new frontier. We invite you to support our initiative at the MDDB community (https://mddbr.eu/community/)
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- 2024
34. Binarity at LOw Metallicity (BLOeM): a spectroscopic VLT monitoring survey of massive stars in the SMC
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Shenar, T., Bodensteiner, J., Sana, H., Crowther, P. A., Lennon, D. J., Abdul-Masih, M., Almeida, L. A., Backs, F., Berlanas, S. R., Bernini-Peron, M., Bestenlehner, J. M., Bowman, D. M., Bronner, V. A., Britavskiy, N., de Koter, A., de Mink, S. E., Deshmukh, K., Evans, C. J., Fabry, M., Gieles, M., Gilkis, A., González-Torà, G., Gräfener, G., Götberg, Y., Hawcroft, C., Hénault-Brunet, V., Herrero, A., Holgado, G., Janssens, S., Johnston, C., Josiek, J., Justham, S., Kalari, V. M., Katabi, Z. Z., Keszthelyi, Z., Klencki, J., Kubát, J., Kubátová, B., Langer, N., Lefever, R. R., Ludwig, B., Mackey, J., Mahy, L., Apellániz, J. Maíz, Mandel, I., Maravelias, G., Marchant, P., Menon, A., Najarro, F., Oskinova, L. M., Ovadia, A. J. G. O'Grady R., Patrick, L. R., Pauli, D., Pawlak, M., Ramachandran, V., Renzo, M., Rocha, D. F., Sander, A. A. C., Sayada, T., Schneider, F. R. N., Schootemeijer, A., Schösser, E. C., Schürmann, C., Sen, K., Shahaf, S., Simón-Díaz, S., Stoop, M., van Loon, J. Th., Toonen, S., Tramper, F., Valli, R., van Son, L. A. C., Vigna-Gómez, A., Villaseñor, J. I., Vink, J. S., Wang, C., and Willcox, R.
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
Surveys in the Milky Way and Large Magellanic Cloud revealed that the majority of massive stars will interact with companions during their lives. However, knowledge of the binary properties of massive stars at low metallicity, which approaches the conditions of the Early Universe, remains sparse. We present the Binarity at LOw Metallicity (BLOeM) campaign - an ESO large programme designed to obtain 25 epochs of spectroscopy for 929 massive stars in the SMC - the lowest metallicity conditions in which multiplicity is probed to date (Z = 0.2 Zsun). BLOeM will provide (i) the binary fraction, (ii) the orbital configurations of systems with periods P < 3 yr, (iii) dormant OB+BH binaries, and (iv) a legacy database of physical parameters of massive stars at low metallicity. The stars are observed with the LR02 setup of the giraffe instrument of the Very Large Telescope (3960-4570A, resolving power R=6200; typical signal-to-noise ratio S/N=70-100). This paper utilises the first 9 epochs obtained over a three-month time. We describe the survey and data reduction, perform a spectral classification of the stacked spectra, and construct a Hertzsprung-Russell diagram of the sample via spectral-type and photometric calibrations. The sample covers spectral types from O4 to F5, spanning the effective temperature and luminosity ranges 6.5
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- 2024
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35. Distinguishing Inner and Outer-Sphere Hot Electron Transfer in Au/p-GaN Photocathodes
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Kiani, Fatemeh, Bowman, Alan R., Sabzehparvar, Milad, Sundararaman, Ravishankar, and Tagliabue, Giulia
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Physics - Chemical Physics - Abstract
Exploring nonequilibrium hot carriers from plasmonic metal nanostructures is a dynamic field in optoelectronics, driving photochemical reactions such as solar fuel generation. The hot carrier injection mechanism and the reaction rate are highly impacted by the metal/molecule interaction. However, determining the primary type of the reaction and thus the injection mechanism of the hot carriers has remained elusive. In this work, we reveal an electron injection mechanism deviating from a purely outersphere process for the reduction of ferricyanide redox molecule in a gold/p-type gallium nitride (Au/p- GaN) photocathode system. Combining our experimental approach with ab initio simulations, we discover that the efficient inner-sphere transfer of low-energy electrons leads to a continuous enhancement in the photocathode device performance in the interband regime. These findings provide important mechanistic insights, showing our methodology as a powerful tool for analyzing and engineering hot-carrier-driven processes in plasmonic photocatalytic systems and optoelectronic devices.
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- 2024
36. Type Universes as Allocation Effects
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Koronkevich, Paulette and Bowman, William J.
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Computer Science - Programming Languages - Abstract
In this paper, we explore a connection between type universes and memory allocation. Type universe hierarchies are used in dependent type theories to ensure consistency, by forbidding a type from quantifying over all types. Instead, the types of types (universes) form a hierarchy, and a type can only quantify over types in other universes (with some exceptions), restricting cyclic reasoning in proofs. We present a perspective where universes also describe \emph{where} values are allocated in the heap, and the choice of universe algebra imposes a structure on the heap overall. The resulting type system provides a simple declarative system for reasoning about and restricting memory allocation, without reasoning about reads or writes. We present a theoretical framework for equipping a type system with higher-order references restricted by a universe hierarchy, and conjecture that many existing universe algebras give rise to interesting systems for reasoning about allocation. We present 3 instantiations of this approach to enable reasoning about allocation in the simply typed $\lambda$-calculus: (1) the standard ramified universe hierarchy, which we prove guarantees termination of the language extended with higher-order references by restricting cycles in the heap; (2) an extension with an \emph{impredicative} base universe, which we conjecture enables full-ground references (with terminating computation but cyclic ground data structures); (3) an extension with \emph{universe polymorphism}, which divides the heap into fine-grained regions., Comment: Submitted to ESOP 2025
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- 2024
37. B'MOJO: Hybrid State Space Realizations of Foundation Models with Eidetic and Fading Memory
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Zancato, Luca, Seshadri, Arjun, Dukler, Yonatan, Golatkar, Aditya, Shen, Yantao, Bowman, Benjamin, Trager, Matthew, Achille, Alessandro, and Soatto, Stefano
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Computer Science - Machine Learning ,Computer Science - Computation and Language ,Computer Science - Neural and Evolutionary Computing - Abstract
We describe a family of architectures to support transductive inference by allowing memory to grow to a finite but a-priori unknown bound while making efficient use of finite resources for inference. Current architectures use such resources to represent data either eidetically over a finite span ("context" in Transformers), or fading over an infinite span (in State Space Models, or SSMs). Recent hybrid architectures have combined eidetic and fading memory, but with limitations that do not allow the designer or the learning process to seamlessly modulate the two, nor to extend the eidetic memory span. We leverage ideas from Stochastic Realization Theory to develop a class of models called B'MOJO to seamlessly combine eidetic and fading memory within an elementary composable module. The overall architecture can be used to implement models that can access short-term eidetic memory "in-context," permanent structural memory "in-weights," fading memory "in-state," and long-term eidetic memory "in-storage" by natively incorporating retrieval from an asynchronously updated memory. We show that Transformers, existing SSMs such as Mamba, and hybrid architectures such as Jamba are special cases of B'MOJO and describe a basic implementation, to be open sourced, that can be stacked and scaled efficiently in hardware. We test B'MOJO on transductive inference tasks, such as associative recall, where it outperforms existing SSMs and Hybrid models; as a baseline, we test ordinary language modeling where B'MOJO achieves perplexity comparable to similarly-sized Transformers and SSMs up to 1.4B parameters, while being up to 10% faster to train. Finally, we show that B'MOJO's ability to modulate eidetic and fading memory results in better inference on longer sequences tested up to 32K tokens, four-fold the length of the longest sequences seen during training.
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- 2024
38. First Results from the Dragonfly Ultrawide Survey: the Largest Eleven Quenched Diffuse Dwarf Galaxies in 3100 deg$^2$ with Spectroscopic Confirmation
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Shen, Zili, Bowman, William P., van Dokkum, Pieter, Abraham, Roberto G., Pasha, Imad, Keim, Michael A., Liu, Qing, Lokhorst, Deborah M., Janssens, Steven R., and Chen, Seery
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Astrophysics - Astrophysics of Galaxies - Abstract
The Dragonfly Telephoto Array employs a unique design to detect very large and diffuse galaxies, which might be missed with conventional telescopes. The Dragonfly Ultrawide Survey (DFUWS) is a new wide-field survey which will cover 10,000 deg$^2$ of the northern sky, and it provides an ideal dataset to find these large diffuse galaxies. From 3100 deg$^2$ of DFUWS data, we identified eleven large, low surface brightness galaxies as a pilot sample for spectroscopic follow-up. These are the largest galaxies in the examined area that appear smooth and isolated, with effective radii of 12"-27". Eight are below 24 $\mathrm{mag\,arcsec^{-2}}$ in central $g$-band surface brightness. Keck Cosmic Web Imager (KCWI) spectra of the diffuse light show that all eleven galaxies in this sample are quiescent, and seven qualify as ultra-diffuse galaxies (UDGs). Eight galaxies have distances between 15 and 30 Mpc, while the other three are in the Pegasus cluster at 50 Mpc. Their spectra show evidence of a $\sim 1$Gyr old stellar population in addition to an even older stellar population. The intermediate-age component is present in group and satellite galaxies but not in the Pegasus cluster UDGs. All galaxies in this sample are detected in both Dragonfly and Legacy imaging, and the sample partially overlaps with existing UDG catalogs. This pilot sample provides an excellent training set for our analysis of the upcoming full 10,000 deg$^2$ DFUWS data, from which we may expect to discover even larger, previously-unknown galaxies., Comment: Submitted to ApJ
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- 2024
39. Spontaneous Reward Hacking in Iterative Self-Refinement
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Pan, Jane, He, He, Bowman, Samuel R., and Feng, Shi
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Computer Science - Computation and Language ,Computer Science - Artificial Intelligence - Abstract
Language models are capable of iteratively improving their outputs based on natural language feedback, thus enabling in-context optimization of user preference. In place of human users, a second language model can be used as an evaluator, providing feedback along with numerical ratings which the generator attempts to optimize. However, because the evaluator is an imperfect proxy of user preference, this optimization can lead to reward hacking, where the evaluator's ratings improve while the generation quality remains stagnant or even decreases as judged by actual user preference. The concern of reward hacking is heightened in iterative self-refinement where the generator and the evaluator use the same underlying language model, in which case the optimization pressure can drive them to exploit shared vulnerabilities. Using an essay editing task, we show that iterative self-refinement leads to deviation between the language model evaluator and human judgment, demonstrating that reward hacking can occur spontaneously in-context with the use of iterative self-refinement. In addition, we study conditions under which reward hacking occurs and observe two factors that affect reward hacking severity: model size and context sharing between the generator and the evaluator.
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- 2024
40. Future Events as Backdoor Triggers: Investigating Temporal Vulnerabilities in LLMs
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Price, Sara, Panickssery, Arjun, Bowman, Sam, and Stickland, Asa Cooper
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Computer Science - Cryptography and Security ,Computer Science - Computation and Language ,Computer Science - Machine Learning - Abstract
Backdoors are hidden behaviors that are only triggered once an AI system has been deployed. Bad actors looking to create successful backdoors must design them to avoid activation during training and evaluation. Since data used in these stages often only contains information about events that have already occurred, a component of a simple backdoor trigger could be a model recognizing data that is in the future relative to when it was trained. Through prompting experiments and by probing internal activations, we show that current large language models (LLMs) can distinguish past from future events, with probes on model activations achieving 90% accuracy. We train models with backdoors triggered by a temporal distributional shift; they activate when the model is exposed to news headlines beyond their training cut-off dates. Fine-tuning on helpful, harmless and honest (HHH) data does not work well for removing simpler backdoor triggers but is effective on our backdoored models, although this distinction is smaller for the larger-scale model we tested. We also find that an activation-steering vector representing a model's internal representation of the date influences the rate of backdoor activation. We take these results as initial evidence that, at least for models at the modest scale we test, standard safety measures are enough to remove these backdoors.
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- 2024
41. Geophysical Observations of the 24 September 2023 OSIRIS-REx Sample Return Capsule Re-Entry
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Silber, Elizabeth A., Bowman, Daniel C., Carr, Chris G., Eisenberg, David P., Elbing, Brian R., Fernando, Benjamin, Garcés, Milton A., Haaser, Robert, Krishnamoorthy, Siddharth, Langston, Charles A., Nishikawa, Yasuhiro, Webster, Jeremy, Anderson, Jacob F., Arrowsmith, Stephen, Bazargan, Sonia, Beardslee, Luke, Beck, Brant, Bishop, Jordan W., Blom, Philip, Bracht, Grant, Chichester, David L., Christe, Anthony, Clarke, Jacob, Cummins, Kenneth, Cutts, James, Danielson, Lisa, Donahue, Carly, Eack, Kenneth, Fleigle, Michael, Fox, Douglas, Goel, Ashish, Green, David, Hasumi, Yuta, Hayward, Chris, Hicks, Dan, Hix, Jay, Horton, Stephen, Hough, Emalee, Huber, David P., Hunt, Madeline A., Inman, Jennifer, Islam, S. M. Ariful, Izraelevitz, Jacob, Jacob, Jamey D., Johnson, James, KC, Real J., Komjathy, Attila, Lam, Eric, LaPierre, Justin, Lewis, Kevin, Lewis, Richard D., Liu, Patrick, Martire, Léo, McCleary, Meaghan, McGhee, Elisa A., Mitra, Ipsita, Nag, Amitabh, Giraldo, Luis Ocampo, Pearson, Karen, Plaisir, Mathieu, Popenhagen, Sarah K., Rassoul, Hamid, Giannone, Miro Ronac, Samnani, Mirza, Schmerr, Nicholas, Spillman, Kate, Srinivas, Girish, Takazawa, Samuel K., Tempert, Alex, Turley, Reagan, Van Beek, Cory, Viens, Loïc, Walsh, Owen A., Weinstein, Nathan, White, Robert, Williams, Brian, Wilson, Trevor C., Wyckoff, Shirin, Yamamoto, Masa-yuki, Yap, Zachary, Yoshiyama, Tyler, and Zeiler, Cleat
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Astrophysics - Earth and Planetary Astrophysics ,Astrophysics - Instrumentation and Methods for Astrophysics ,Physics - Geophysics - Abstract
Sample Return Capsules (SRCs) entering Earth's atmosphere at hypervelocity from interplanetary space are a valuable resource for studying meteor phenomena. The 24 September 2023 arrival of the OSIRIS-REx (Origins, Spectral Interpretation, Resource Identification, and Security-Regolith Explorer) SRC provided an unprecedented chance for geophysical observations of a well-characterized source with known parameters, including timing and trajectory. A collaborative effort involving researchers from 16 institutions executed a carefully planned geophysical observational campaign at strategically chosen locations, deploying over 400 ground-based sensors encompassing infrasound, seismic, distributed acoustic sensing (DAS), and GPS technologies. Additionally, balloons equipped with infrasound sensors were launched to capture signals at higher altitudes. This campaign (the largest of its kind so far) yielded a wealth of invaluable data anticipated to fuel scientific inquiry for years to come. The success of the observational campaign is evidenced by the near-universal detection of signals across instruments, both proximal and distal. This paper presents a comprehensive overview of the collective scientific effort, field deployment, and preliminary findings. The early findings have the potential to inform future space missions and terrestrial campaigns, contributing to our understanding of meteoroid interactions with planetary atmospheres. Furthermore, the dataset collected during this campaign will improve entry and propagation models as well as augment the study of atmospheric dynamics and shock phenomena generated by meteoroids and similar sources., Comment: 87 pages, 14 figures
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- 2024
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42. Suicide Risk in Transition-Aged Autistic Youth: The Link among Executive Function, Depression, and Autistic Traits
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Michal L. Cook, Brianne Tomaszewski, Elena Lamarche, Karrah Bowman, Claire B. Klein, Sara Stahl, and Laura G. Klinger
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Autistic individuals are at significantly higher risk of suicide than non-autistic individuals, with transition-aged youth at potentially the highest risk. While lower executive function (EF) skills have been significantly associated with suicide risk in other clinical samples, the link between EF and suicidality has not yet been examined for autistic individuals. In this study, 183 transition-aged autistic youths completed routine suicide risk assessments and self- and informant-reports of autistic traits, depression, and EF skills. On the P4 Suicide Screener, approximately one-third of the sample (33.3%) endorsed having thoughts of hurting themselves with the intent to end their lives (i.e., suicidal ideation) in their lifetime. In addition to depressive symptoms, EF impairment independently predicted endorsement of suicidal ideation, indicating that both are crucial intervention goals to target suicidal risk for transition-aged youth on the spectrum. Findings suggest that executive functioning, a prevalent area of difficulty and common intervention target for the autistic community, is an important indicator of suicide risk in this population.
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- 2024
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43. Strategically Diverse: An Intersectional Analysis of Enrollments at U.S. Law Schools
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Nicholas A. Bowman, Frank Fernandez, Solomon Fenton-Miller, and Nicholas R. Stroup
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Legal education scholars have argued that law schools strategically use Students of Color for enrollment management purposes; they can admit more to meet admission targets, but they should not enroll so many that they need to open new course sections. As law school applications decline, we analyze enrollment panel data reported to the American Bar Association. We find that examining the intersection of race and gender matters for understanding the ways that law schools are strategic about diversity in enrollment management. For each group (e.g., Black women, White men), law schools balance higher enrollment in one year with lower incoming enrollment of that same group in the subsequent year, thereby working against the racial diversification of legal education and the legal profession. In some instances, higher enrollment in one group (e.g., Hispanic women) also leads to higher enrollment in the subsequent year among incoming students with the same race but different gender (e.g., Hispanic men). This analytical approach -- informed by intersectionality -- reveals that differential race x gender patterns would be overlooked in analyses that solely focused on race while not considering gender. Moreover, the results are generally robust across models examining both the number and percentage representation of incoming students. Finally, we find evidence that these balancing dynamics are sometimes more pronounced at law schools with higher median LSAT scores, which are typically most selective. We discuss implications for equity in legal education and future research directions for graduate and professional education.
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- 2024
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44. Social Skills Interventions in Preschool Settings: A Meta-Analysis of SCR Studies
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Xin Dong, Mack D. Burke, Lisa Sanchez, and Lisa Bowman-Perrott
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Developing social competence for preschoolers is an important area for early intervention, especially for young children with emotional and behavioral issues. This single case meta-analysis focused on examining the literature base for social skills interventions for preschoolers. A systematic search of the literature yielded 33 single-case studies on social skills interventions for preschoolers. Results from the aggregated single case studies using a baseline corrected Tau-U indicated a moderate to large effect (Baseline Corrected Tau = 0.66). Moderator analysis results showed gender and intervention format were statistically significant moderators for the intervention effect. Limitations and directions for future research were discussed within the context of social-behavioral research and early intervention in preschool settings.
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- 2024
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45. Separate School Placement for Students with Extensive Support Needs and the Potential Impact of Locale and Charter School Enrollment
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Jessica A. Bowman, Yi-Chen Wu, Shawnee Wakeman, Gail Ghere, and Holly Johnson
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Separate school placements persist for students with extensive support needs (ESN) despite longstanding federal mandates for all students with disabilities to be educated in the least restrictive environment. This study extends research on separate school placement for students with ESN to explore the potential impact of locale and charter school policy by determining (1) the percentage of separate schools in states across locales, (2) whether there is a relationship between the percentages of separate schools in each locale and separate school placement rates, and (3) how the number and location of separate special education charter schools change by state over time. Results showed varying proportions of separate schools among each locale in states with different placement rates, a significant moderate difference between the percentage of separate schools in suburban locales and overall separate school placement rate, and few separate special education charter schools. Implications for research and practice are highlighted.
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- 2024
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46. Achievement Effects of Dual Language Immersion in One-Way and Two-Way Programs: Evidence from a Statewide Expansion
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Jennifer L. Steele, Johanna Watzinger-Tharp, Robert O. Slater, Gregg Roberts, and Karl Bowman
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The rising demand for dual-language immersion (DLI) programs, which offer core instruction in two languages from early grades onward, has raised questions about program design and access. We leverage the rapid expansion of DLI schools across the U.S. state of Utah to estimate effects of DLI program availability on the academic achievement of primary English speakers and English learners (ELs) in programs that serve mainly the former (one-way) or at least a third of the latter (two-way). Using within-school variation in first graders' access to DLI programs, we find no overall effects on English, math, or science scores from grades 3 to 6. However, ELs whose primary languages match the schools' partner languages in two-way schools show notable outperformance in math and higher English-language proficiency at grade 5. Benefits of DLI access are driven by schools with a larger share of primary speakers of the partner language. [This paper will be published in "The B.E. Journal of Economic Analysis and Policy."]
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- 2024
47. Advancements in APOE and dementia research: Highlights from the 2023 AAIC Advancements: APOE conference.
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Kloske, Courtney, Belloy, Michael, Blue, Elizabeth, Bowman, Gregory, Carrillo, Maria, Chen, Xiaoying, Chiba-Falek, Ornit, Davis, Albert, Paolo, Gilbert, Garretti, Francesca, Gate, David, Golden, Lesley, Heinecke, Jay, Herz, Joachim, Huang, Yadong, Iadecola, Costantino, Johnson, Lance, Kanekiyo, Takahisa, Karch, Celeste, Khvorova, Anastasia, Koppes-den Hertog, Sascha, Lamb, Bruce, Lawler, Paige, Guen, Yann, Litvinchuk, Alexandra, Liu, Chia-Chen, Mahinrad, Simin, Marcora, Edoardo, Marino, Claudia, Michaelson, Danny, Miller, Justin, Morganti, Josh, Narayan, Priyanka, Naslavsky, Michel, Oosthoek, Marlies, Ramachandran, Kapil, Ramakrishnan, Abhirami, Raulin, Ana-Caroline, Robert, Aiko, Saleh, Rasha, Sexton, Claire, Shah, Nilomi, Shue, Francis, Sible, Isabel, Soranno, Andrea, Strickland, Michael, Tcw, Julia, Thierry, Manon, Tsai, Li-Huei, Tuckey, Ryan, Ulrich, Jason, van der Kant, Rik, Wang, Na, Wellington, Cheryl, Weninger, Stacie, Yassine, Hussein, Zhao, Na, Bu, Guojun, Goate, Alison, and Holtzman, David
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APOE ,Alzheimers disease ,apolipoprotein E ,conference proceedings ,dementia ,lipids ,microglia ,neuroinflammation ,risk factor ,therapeutics ,vasculature ,Humans ,Apolipoproteins E ,Alzheimer Disease ,Congresses as Topic ,Animals ,Amyloid beta-Peptides ,Dementia ,Biomedical Research - Abstract
INTRODUCTION: The apolipoprotein E gene (APOE) is an established central player in the pathogenesis of Alzheimers disease (AD), with distinct apoE isoforms exerting diverse effects. apoE influences not only amyloid-beta and tau pathologies but also lipid and energy metabolism, neuroinflammation, cerebral vascular health, and sex-dependent disease manifestations. Furthermore, ancestral background may significantly impact the link between APOE and AD, underscoring the need for more inclusive research. METHODS: In 2023, the Alzheimers Association convened multidisciplinary researchers at the AAIC Advancements: APOE conference to discuss various topics, including apoE isoforms and their roles in AD pathogenesis, progress in apoE-targeted therapeutic strategies, updates on disease models and interventions that modulate apoE expression and function. RESULTS: This manuscript presents highlights from the conference and provides an overview of opportunities for further research in the field. DISCUSSION: Understanding apoEs multifaceted roles in AD pathogenesis will help develop targeted interventions for AD and advance the field of AD precision medicine. HIGHLIGHTS: APOE is a central player in the pathogenesis of Alzheimers disease. APOE exerts a numerous effects throughout the brain on amyloid-beta, tau, and other pathways. The AAIC Advancements: APOE conference encouraged discussions and collaborations on understanding the role of APOE.
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- 2024
48. Enhanced Carbon Flux Response to Atmospheric Aridity and Water Storage Deficit During the 2015–2016 El Niño Compromised Carbon Balance Recovery in Tropical South America
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Liu, Junjie, Bowman, Kevin, Palmer, Paul I, Joiner, Joanna, Levine, Paul, Bloom, A Anthony, Feng, Liang, Saatchi, Sassan, Keller, Michael, Longo, Marcos, Schimel, David, and Wennberg, Paul O
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Earth Sciences ,Atmospheric Sciences ,Climate Action ,aridity ,water storage deficit ,tropical South America ,recovery ,Climate change science ,Geology ,Physical geography and environmental geoscience - Abstract
During the 2015–2016 El Niño, the Amazon basin released almost one gigaton of carbon (GtC) into the atmosphere due to extreme temperatures and drought. The link between the drought impact and recovery of the total carbon pools and its biogeochemical drivers is still unknown. With satellite-constrained net carbon exchange and its component fluxes including gross primary production and fire emissions, we show that the total carbon loss caused by the 2015–2016 El Niño had not recovered by the end of 2018. Forest ecosystems over the Northeastern (NE) Amazon suffered a cumulative total carbon loss of ∼0.6 GtC through December 2018, driven primarily by a suppression of photosynthesis whereas southeastern savannah carbon loss was driven in part by fire. We attribute the slow recovery to the unexpected large carbon loss caused by the severe atmospheric aridity coupled with a water storage deficit during drought. We show the attenuation of carbon uptake is three times higher than expected from the pre-drought sensitivity to atmospheric aridity and ground water supply. Our study fills an important knowledge gap in our understanding of the unexpectedly enhanced response of carbon fluxes to atmospheric aridity and water storage deficit and its impact on regional post-drought recovery as a function of the vegetation types and climate perturbations. Our results suggest that the disproportionate impact of water supply and demand could compromise resiliency of the Amazonian carbon balance to future increases in extreme events.
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- 2024
49. Changes in microbial community structure of bio-fouled polyolefins over a year-long seawater incubation in Hawaii.
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Connors, Elizabeth, Lebreton, Laurent, Bowman, Jeff, and Royer, Sarah-Jeanne
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Seawater ,Hawaii ,Bacteria ,RNA ,Ribosomal ,16S ,RNA ,Ribosomal ,18S ,Microbiota ,Polyenes ,Biofilms ,Polyethylene ,Biofouling ,Diatoms ,Phylogeny - Abstract
Plastic waste, especially positively buoyant polymers known as polyolefins, are a major component of floating debris in the marine environment. While plastic colonisation by marine microbes is well documented from environmental samples, the succession of marine microbial community structure over longer time scales (> > 1 month) and across different types and shapes of plastic debris is less certain. We analysed 16S rRNA and 18S rRNA amplicon gene sequences from biofilms on polyolefin debris floating in a flow-through seawater tank in Hawaii to assess differences in microbial succession across the plastic types of polypropylene (PP) and both high-density polyethylene (HDPE) and low-density polyethylene (LDPE) made of different plastic shapes (rod, film and cube) under the same environmental conditions for 1 year. Regardless of type or shape, all plastic debris were dominated by the eukaryotic diatom Nitzschia, and only plastic type was significantly important for bacterial community structure over time (p = 0.005). PE plastics had higher differential abundance when compared to PP for 20 bacterial and eight eukaryotic taxa, including the known plastic degrading bacterial taxon Hyphomonas (p = 0.01). Results from our study provide empirical evidence that plastic type may be more important for bacterial than eukaryotic microbial community succession on polyolefin pollution under similar conditions.
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- 2024
50. Neurodevelopment in preschool children exposed and unexposed to Zika virus in utero in Nicaragua: a prospective cohort study.
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Max, Ryan, Toval-Ruiz, Christian, Becker-Dreps, Sylvia, Gajewski, Anna, Martinez, Evelin, Cross, Kaitlyn, Blette, Bryan, Ortega, Oscar, Collado, Damaris, Zepeda, Omar, Familiar, Itziar, Boivin, Michael, Chavarria, Meylin, Meléndez, María, Mercado, Juan, de Silva, Aravinda, Collins, Matthew, Westreich, Daniel, Bos, Sandra, Harris, Eva, Balmaseda, Angel, Gower, Emily, Bowman, Natalie, Stringer, Elizabeth, and Bucardo, Filemón
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Humans ,Nicaragua ,Zika Virus Infection ,Female ,Prospective Studies ,Child ,Preschool ,Pregnancy ,Male ,Prenatal Exposure Delayed Effects ,Infant ,Pregnancy Complications ,Infectious ,Child Development ,Zika Virus ,Adult ,Neurodevelopmental Disorders - Abstract
BACKGROUND: Data on long-term neurodevelopmental outcomes of normocephalic children (born with normal head circumference) exposed to Zika virus in utero are scarce. We aimed to compare neurodevelopmental outcomes in normocephalic children up to age 48 months with and without Zika virus exposure in utero. METHODS: In this prospective cohort study, we included infants from two cohorts of normocephalic children born in León and Managua, Nicaragua during the 2016 Zika epidemic. In León, all women pregnant during the two enrolment periods were eligible. In Managua, mother-child pairs were included from three districts in the municipality of Managua: all women who became pregnant before June 15, 2016, and had a due date of Sept 15, 2016 or later were eligible. Infants were serologically classified as Zika virus-exposed or Zika virus-unexposed in utero and were followed up prospectively until age 48 months. At 36 months and 48 months of age, the Mullen Scales of Early Learning (MSEL) assessment was administered. Primary outcomes were MSEL early learning composite (ELC) scores at 30-48 months in León and 36-48 months in Managua. We used an inverse probability weighting generalised estimating equations model to assess the effect of Zika virus exposure on individual MSEL cognitive domain scores and ELC scores, adjusted for maternal education and age, poverty status, and infant sex. FINDINGS: The initial enrolment period for the León cohort was between Jan 31 and April 5, 2017 and the second was between Aug 30, 2017, and Feb 22, 2018. The enrolment period for the Managua cohort was between Oct 24, 2019, and May 5, 2020. 478 mothers (482 infants) from the León cohort and 615 mothers (609 infants) from the Managua cohort were enrolled, of whom 622 children (303 from the León cohort; 319 from the Managua cohort) were included in the final analysis; four children had microcephaly at birth and thus were excluded from analyses, two from each cohort. 33 (11%) of 303 children enrolled in León and 219 (69%) of 319 children enrolled in Managua were exposed to Zika virus in utero. In both cohorts, no significant differences were identified in adjusted mean ELC scores between Zika virus-exposed and unexposed infants at 36 months (between-group difference 1·2 points [95% CI -4·2 to 6·5] in the León cohort; 2·8 [-2·4 to 8·1] in the Managua cohort) or at 48 months (-0·9 [-10·8 to 8·8] in the León cohort; 0·1 [-5·1 to 5·2] in the Managua cohort). No differences in ELC scores between Zika virus-exposed and unexposed infants exceeded 6 points at any time between 30 months and 48 months in León or between 36 months and 48 months in Managua, which was considered clinically significant in other settings. INTERPRETATION: We found no significant differences in neurodevelopmental scores between normocephalic children with in-utero Zika virus exposure and Zika virus-unexposed children at age 36 months or 48 months. These findings are promising, supporting typical neurodevelopment in Zika virus-exposed normocephalic children, although additional follow-up and research is warranted. FUNDING: National Institute of Child Health and Development, National Institute of Allergy and Infectious Diseases, and Fogarty International Center. TRANSLATION: For the Spanish translation of the abstract see Supplementary Materials section.
- Published
- 2024
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