7 results on '"Anne Böhmer"'
Search Results
2. Detection of head-to-tail DNA sequences of human bocavirus in clinical samples.
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Jessica Lüsebrink, Verena Schildgen, Ramona Liza Tillmann, Felix Wittleben, Anne Böhmer, Andreas Müller, and Oliver Schildgen
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Medicine ,Science - Abstract
Parvoviruses are single stranded DNA viruses that replicate in a so called "rolling-hairpin" mechanism, a variant of the rolling circle replication known for bacteriophages like φX174. The replication intermediates of parvoviruses thus are concatemers of head-to-head or tail-to-tail structure. Surprisingly, in case of the novel human bocavirus, neither head-to-head nor tail-to-tail DNA sequences were detected in clinical isolates; in contrast head-to-tail DNA sequences were identified by PCR and sequencing. Thereby, the head-to-tail sequences were linked by a novel sequence of 54 bp of which 20 bp also occur as conserved structures of the palindromic ends of parvovirus MVC which in turn is a close relative to human bocavirus.
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- 2011
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3. A comprehensive re-assessment of the association between vitamin D and cancer susceptibility using Mendelian randomization
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Upekha E Liyanage, Amanda B. Spurdle, K. E. Huber, Anna H. Wu, J. Fah Sathirapongsasuti, Douglas A. Corley, C. Tian, Anne Böhmer, David A. Hinds, A. Auton, Xikun Han, Matt Buas, M. Agee, Rebecca C. Fitzgerald, Puya Gharahkhani, Yvonne Romero, S. L. Elson, Ines Gockel, Johannes Schumacher, Leslie Bernstein, Nigel C. Bird, Thomas L. Vaughan, E. S. Noblin, P. Fontanillas, Laura J. Hardie, Brian J. Reid, V. Vacic, M. H. McIntyre, Jiyuan An, Andrew Berchuck, Claire Palles, Weimin Ye, K. Bryc, S. J. Pitts, Jue-Sheng Ong, Geoffrey Liu, R. K. Bell, Rachel E. Neale, Marilie D. Gammon, J. L. Mountain, C. A. M. Northover, Catherine M. Olsen, C. H. Wilson, Janusz Jankowski, Matthew Law, A. Kleinman, Suzanne C. Dixon-Suen, J. Y. Tung, Aaron P. Thrift, Wong-Ho Chow, Paul Pharoah, Jean-Cluade Dusingize, Suyash Shringarpure, Mark M. Iles, Wei Zheng, N. A. Furlotte, Penelope M. Webb, B. Alipanahi, O. V. Sazonova, Stuart MacGregor, David Whiteman, J. F. Shelton, Harvey A. Risch, N. K. Litterman, Tracy A. O'Mara, Nicholas J. Shaheen, Ong, Jue-Sheng [0000-0002-6062-710X], Dixon-Suen, Suzanne C [0000-0003-3714-8386], Han, Xikun [0000-0002-3823-7308], Gockel, Ines [0000-0001-7423-713X], Böhmer, Anne [0000-0002-5716-786X], O'Mara, Tracy [0000-0002-5436-3232], Spurdle, Amanda [0000-0003-1337-7897], Law, Matthew H [0000-0002-4303-8821], Iles, Mark M [0000-0002-2603-6509], Pharoah, Paul [0000-0001-8494-732X], Zheng, Wei [0000-0003-1226-070X], Thrift, Aaron P [0000-0002-0084-5308], Olsen, Catherine [0000-0003-4483-1888], Gharahkhani, Puya [0000-0002-4203-5952], Webb, Penelope M [0000-0003-0733-5930], MacGregor, Stuart [0000-0001-6731-8142], and Apollo - University of Cambridge Repository
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0301 basic medicine ,Oncology ,medicine.medical_specialty ,Science ,General Physics and Astronomy ,Sunburn ,Single-nucleotide polymorphism ,General Biochemistry, Genetics and Molecular Biology ,Article ,Cancer prevention ,03 medical and health sciences ,0302 clinical medicine ,Cancer epidemiology ,Risk Factors ,Internal medicine ,Neoplasms ,Mendelian randomization ,Vitamin D and neurology ,medicine ,Humans ,Genetic Predisposition to Disease ,030212 general & internal medicine ,Risk factor ,Vitamin D ,Child ,Cancer genetics ,Multidisciplinary ,business.industry ,Pigmentation ,Case-control study ,Cancer ,Mendelian Randomization Analysis ,General Chemistry ,medicine.disease ,Confidence interval ,030104 developmental biology ,Case-Control Studies ,Multivariate Analysis ,business - Abstract
Previous Mendelian randomization (MR) studies on 25-hydroxyvitamin D (25(OH)D) and cancer have typically adopted a handful of variants and found no relationship between 25(OH)D and cancer; however, issues of horizontal pleiotropy cannot be reliably addressed. Using a larger set of variants associated with 25(OH)D (74 SNPs, up from 6 previously), we perform a unified MR analysis to re-evaluate the relationship between 25(OH)D and ten cancers. Our findings are broadly consistent with previous MR studies indicating no relationship, apart from ovarian cancers (OR 0.89; 95% C.I: 0.82 to 0.96 per 1 SD change in 25(OH)D concentration) and basal cell carcinoma (OR 1.16; 95% C.I.: 1.04 to 1.28). However, after adjustment for pigmentation related variables in a multivariable MR framework, the BCC findings were attenuated. Here we report that lower 25(OH)D is unlikely to be a causal risk factor for most cancers, with our study providing more precise confidence intervals than previously possible., Studies of the genetic association between vitamin D and cancer risk have typically been underpowered. Here the authors analyse this using Mendelian Randomisation with more than 70 vitamin D variants obtained from the UK Biobank and large-scale data from various consortia, confirming null associations between vitamin D and most cancers.
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- 2020
4. Sex-Specific Genetic Associations for Barrett's Esophagus and Esophageal Adenocarcinoma
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Jing Dong, Carlo Maj, Spiridon Tsavachidis, Quinn T. Ostrom, Puya Gharahkhani, Lesley A. Anderson, Anna H. Wu, Weimin Ye, Leslie Bernstein, Oleg Borisov, Julia Schröder, Wong-Ho Chow, Marilie D. Gammon, Geoffrey Liu, Carlos Caldas, Paul D. Pharoah, Harvey A. Risch, Andrea May, Christian Gerges, Mario Anders, Marino Venerito, Thomas Schmidt, Jakob R. Izbicki, Arnulf H. Hölscher, Brigitte Schumacher, Yogesh Vashist, Horst Neuhaus, Thomas Rösch, Michael Knapp, Peter Krawitz, Anne Böhmer, Prasad G. Iyer, Brian J. Reid, Jesper Lagergren, Nicholas J. Shaheen, Douglas A. Corley, Ines Gockel, Rebecca C. Fitzgerald, Michael B. Cook, David C. Whiteman, Thomas L. Vaughan, Johannes Schumacher, and Aaron P. Thrift
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0301 basic medicine ,Oncology ,Male ,Linkage disequilibrium ,medicine.medical_specialty ,Esophageal Neoplasms ,Population ,Single-nucleotide polymorphism ,Genome-wide association study ,Adenocarcinoma ,Polymorphism, Single Nucleotide ,Risk Assessment ,Article ,03 medical and health sciences ,Barrett Esophagus ,0302 clinical medicine ,Sex Factors ,Risk Factors ,Internal medicine ,medicine ,Biomarkers, Tumor ,Humans ,Genetic Predisposition to Disease ,Obesity ,education ,Eye Proteins ,Genetic association ,education.field_of_study ,Hepatology ,business.industry ,Serine Endopeptidases ,Gastroenterology ,RNA-Binding Proteins ,medicine.disease ,Minor allele frequency ,030104 developmental biology ,Renal disorders Radboud Institute for Molecular Life Sciences [Radboudumc 11] ,Genetic Loci ,Barrett's esophagus ,Case-Control Studies ,GERD ,Gastroesophageal Reflux ,030211 gastroenterology & hepatology ,Female ,business ,Genome-Wide Association Study - Abstract
Contains fulltext : 229320.pdf (Publisher’s version ) (Closed access) BACKGROUND & AIMS: Esophageal adenocarcinoma (EA) and its premalignant lesion, Barrett's esophagus (BE), are characterized by a strong and yet unexplained male predominance (with a male-to-female ratio in EA incidence of up to 6:1). Genome-wide association studies (GWAS) have identified more than 20 susceptibility loci for these conditions. However, potential sex differences in genetic associations with BE/EA remain largely unexplored. METHODS: Given strong genetic overlap, BE and EA cases were combined into a single case group for analysis. These were compared with population-based controls. We performed sex-specific GWAS of BE/EA in 3 separate studies and then used fixed-effects meta-analysis to provide summary estimates for >9 million variants for male and female individuals. A series of downstream analyses were conducted separately in male and female individuals to identify genes associated with BE/EA and the genetic correlations between BE/EA and other traits. RESULTS: We included 6758 male BE/EA cases, 7489 male controls, 1670 female BE/EA cases, and 6174 female controls. After Bonferroni correction, our meta-analysis of sex-specific GWAS identified 1 variant at chromosome 6q11.1 (rs112894788, KHDRBS2-MTRNR2L9, P(BONF) = .039) that was statistically significantly associated with BE/EA risk in male individuals only, and 1 variant at chromosome 8p23.1 (rs13259457, PRSS55-RP1L1, P(BONF) = 0.057) associated, at borderline significance, with BE/EA risk in female individuals only. We also observed strong genetic correlations of BE/EA with gastroesophageal reflux disease in male individuals and obesity in female individuals. CONCLUSIONS: The identified novel sex-specific variants associated with BE/EA could improve the understanding of the genetic architecture of the disease and the reasons for the male predominance.
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- 2020
5. Identification of loci of functional relevance to Barrett's esophagus and esophageal adenocarcinoma: Cross-referencing of expression quantitative trait loci data from disease-relevant tissues with genetic association data
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Jessica Becker, Johannes Schumacher, Elisabeth Mangold, Christian Gerges, Michael Knapp, Claudia Fuchs, Stefan Niebisch, Kerstin U. Ludwig, Yusef Moulla, Tania Noder, Jakob R. Izbicki, Hauke Lang, René Thieme, Markus M. Nöthen, Ines Gockel, Matthias Mehdorn, Michael Vieth, Thomas Schmidt, Marino Venerito, Susanne Moebus, Rupert Mayershofer, Christian Ell, Orestis Lyros, Katja Ott, Andrea May, Boris Jansen-Winkeln, Josef Weismüller, Brigitte Schumacher, Timo Hess, Mario Anders, Dani Dakkak, Anne Böhmer, Nicole Kreuser, Dietmar Lorenz, Julia Schröder, Arnulf H. Hölscher, Lothar Veits, Horst Neuhaus, Vitalia Schüller, Yogesh K. Vashist, and Thomas Rösch
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0301 basic medicine ,Candidate gene ,Esophageal Mucosa ,Esophageal Neoplasms ,Medizin ,Gene Expression ,Genome-wide association study ,0302 clinical medicine ,Mathematical and Statistical Techniques ,Genetics ,Multidisciplinary ,Sodium-Hydrogen Exchanger 3 ,Statistics ,Genomics ,Metaanalysis ,Gene Expression Regulation, Neoplastic ,Research Design ,030220 oncology & carcinogenesis ,Physical Sciences ,Medicine ,Research Article ,medicine.medical_specialty ,Science ,Quantitative Trait Loci ,Replication Studies ,Context (language use) ,Biology ,Adenocarcinoma ,Research and Analysis Methods ,Polymorphism, Single Nucleotide ,Molecular Genetics ,03 medical and health sciences ,Barrett Esophagus ,Molecular genetics ,medicine ,Genome-Wide Association Studies ,Humans ,Genetic Predisposition to Disease ,Gene Regulation ,Statistical Methods ,Gene ,Molecular Biology ,Genetic association ,Proteins ,Biology and Life Sciences ,Computational Biology ,Human Genetics ,medicine.disease ,Genome Analysis ,Repressor Proteins ,030104 developmental biology ,Genetic Loci ,Barrett's esophagus ,Expression quantitative trait loci ,Genetics of Disease ,Mathematics ,Genome-Wide Association Study - Abstract
Esophageal adenocarcinoma (EA) and its precancerous condition Barrett's esophagus (BE) are multifactorial diseases with rising prevalence rates in Western populations. A recent meta-analysis of genome-wide association studies (GWAS) data identified 14 BE/EA risk loci located in non-coding genomic regions. Knowledge about the impact of non-coding variation on disease pathology is incomplete and needs further investigation. The aim of the present study was (i) to identify candidate genes of functional relevance to BE/EA at known risk loci and (ii) to find novel risk loci among the suggestively associated variants through the integration of expression quantitative trait loci (eQTL) and genetic association data. eQTL data from two BE/EA-relevant tissues (esophageal mucosa and gastroesophageal junction) generated within the context of the GTEx project were cross-referenced with the GWAS meta-analysis data. Variants representing an eQTL in at least one of the two tissues were categorized into genome-wide significant loci (P < 5?0⁻⁸) and novel candidate loci (5?0⁻⁸ ≤ P ≤ 5?0⁻⁵). To follow up these novel candidate loci, a genetic association study was performed in a replication cohort comprising 1,993 cases and 967 controls followed by a combined analysis with the GWAS meta-analysis data. The cross-referencing of eQTL and genetic data yielded 2,180 variants that represented 25 loci. Among the previously reported genome-wide significant loci, 22 eQTLs were identified in esophageal mucosa and/or gastroesophageal junction tissue. The regulated genes, most of which have not been linked to BE/EA etiology so far, included C2orf43/LDAH, ZFP57, and SLC9A3. Among the novel candidate loci, replication was achieved for two variants (rs7754014, Pcₒmbinₑd = 3.16?0⁻⁷ and rs1540, Pcₒmbinₑd = 4.16?0⁻⁶) which represent eQTLs for CFDP1 and SLC22A3, respectively. In summary, the present approach identified candidate genes whose expression was regulated by risk variants in disease-relevant tissues. These findings may facilitate the elucidation of BE/EA pathophysiology. CA extern
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- 2019
6. Aufklärung biologischer Pathomechanismen am Chromosom 5p15 beim Barrett-Ösophagus und ösophagealem Adenokarzinom
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Kerstin U. Ludwig, Ronja Hollstein, René Thieme, J Schumacher, Ines Gockel, Anne Böhmer, Vitalia Schüller, and Julia Schröder
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- 2019
7. Gekommen, um zu bleiben? Zum Zusammenhang des Institutionalisierungsprozesses der AfD und ihrer Erfolgschancen nach der Bundestagswahl 2017
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Anne Böhmer and Kristina Weissenbach
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Politikwissenschaft - Abstract
„Wir sind gekommen, um zu bleiben, weil Deutschland uns braucht“ erklarte Frauke Petry, die damalige Bundes- und sachsische Landes- und Fraktionsvorsitzende der AfD, in ihrer Rede anlasslich des Bundesparteitags 2015 (Petry 2015).
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- 2019
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