352 results on '"Chang DH"'
Search Results
202. Dermabacter vaginalis sp. nov., isolated from human vaginal fluid.
- Author
-
Chang DH, Rhee MS, and Kim BC
- Subjects
- Actinomycetales genetics, Actinomycetales isolation & purification, Asian People, Bacterial Typing Techniques, Base Composition, DNA, Bacterial genetics, Diaminopimelic Acid chemistry, Fatty Acids chemistry, Female, Glycolipids chemistry, Humans, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan chemistry, Phospholipids chemistry, RNA, Ribosomal, 16S genetics, Republic of Korea, Sequence Analysis, DNA, Vitamin K 2 chemistry, Actinomycetales classification, Phylogeny, Vagina microbiology
- Abstract
A novel actinobacterial strain, AD1-86T, was isolated from the vaginal fluid of a Korean female and was characterized by a polyphasic approach. The strain was a facultatively anaerobic, Gram-stain-positive, non-spore-forming, non-motile, catalase-positive and oxidase-negative short rod. Colonies were creamy white, of low convexity and 1-2 mm in diameter after growth on DSM 92 agar plates at 37 °C for 2 days. The most closely related strains were Dermabacter hominis DSM 7083T and Helcobacillus massiliensis 6401990T (98.3 and 96.3 % 16S rRNA gene sequence similarity, respectively). The isolate grew optimally at 37 °C and pH 7 in the presence of 0.5% (w/v) NaCl. The cell-wall peptidoglycan contained meso-diaminopimelic acid and the cell-wall hydrolysates contained ribose, galactose and glucose. The DNA G+C content was 62.6 mol% and the mean DNA-DNA relatedness value of the isolate to D. hominis DSM 7083T was 31.1±3.0% (reciprocal: 48.2±5.3%). The major cellular fatty acids (>10%) were anteiso-C17:0, anteiso-C15:0 and iso-C16:0, and the menaquinones were MK-9, MK-8 and MK-7. The polar lipid profile of strain AD1-86T consisted of diphosphatidylglycerol, phosphatidylglycerol, two aminolipids and a glycolipid. Data from this polyphasic study indicate that strain AD1-86T represents a novel species of the genus Dermabacter, for which the name Dermabacter vaginalis sp. nov. is proposed; the type strain is AD1-86T (=KCTC 39585T=DSM 100050T).
- Published
- 2016
- Full Text
- View/download PDF
203. The neck shaft angle: CT reference values of 800 adult hips.
- Author
-
Boese CK, Jostmeier J, Oppermann J, Dargel J, Chang DH, Eysel P, and Lechler P
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Female, Humans, Male, Middle Aged, Radiographic Image Interpretation, Computer-Assisted, Reference Values, Retrospective Studies, Hip Joint diagnostic imaging, Tomography, X-Ray Computed methods
- Abstract
Objective: A precise understanding of the radiological anatomy and biomechanics as well as reliable reference values of the hip are essential. The primary goal of this study was to provide reference values of the neck-shaft angle (NSA) for adult patients based on the analysis of rotation corrected computed tomography (CT) scans of 800 hips. The secondary aim was to compare these measurements with simulated anteroposterior roentgenograms of the pelvis., Materials and Methods: Pelvic CT scans of 400 patients (54.3 years, range 18-100 years; 200 female) were reconstructed in the derotated coronal plane of the proximal femur and as CT-based simulated anteroposterior roentgenograms of the pelvis in the anterior pelvic plane. Femora were categorized as coxa vara (<120°), physiologic (≥120° to <135°), and coxa valga (≥135°). Intra- and inter-rater reliability were analyzed., Results: Primary research question: Mean NSA for male adults was 129.6° (range 113.2°-148.2°; SD 5.9°) and 131.9° (range 107.1°-151.9°; SD 6.8°) for females in derotated coronal reconstructions. Age (p < 0.001 in both views) and sex influenced the NSA significantly (p = 0.002 and p < 0.001); no significant differences were found between sides (p = 0.722 and p = 0.955). Overall, an excellent reliability of repeated measurements of one or two observers was found (ICC 0.891-0.995). Secondary research question: NSA values measured in the simulated anteroposterior roentgenogram and the rotation corrected coronal reconstruction differed significantly (p < 0.001)., Conclusions: While anteroposterior pelvis radiographs are susceptible to rotational errors, the coronal reconstruction of the proximal femur in the femoral neck plane allows the correct measurement of the NSA.
- Published
- 2016
- Full Text
- View/download PDF
204. Atypical Lipomatous Tumors of the Extremities and Trunk Wall-The First Case Series of Chinese Population With 45 Cases.
- Author
-
Chang DH, Ma H, Liao WC, Huang MH, and Wu PS
- Subjects
- Adult, Aged, Aged, 80 and over, Female, Follow-Up Studies, Humans, Liposarcoma diagnosis, Liposarcoma mortality, Liposarcoma radiotherapy, Male, Middle Aged, Neoplasm Recurrence, Local, Postoperative Complications, Radiotherapy, Adjuvant, Retrospective Studies, Soft Tissue Neoplasms diagnosis, Soft Tissue Neoplasms mortality, Soft Tissue Neoplasms radiotherapy, Survival Analysis, Treatment Outcome, Extremities surgery, Liposarcoma surgery, Soft Tissue Neoplasms surgery, Thoracic Wall surgery
- Abstract
Background: Atypical lipomatous tumor (ALT) is a low-grade, slow-growing, locally aggressive malignant mesenchymal neoplasm. ALT of the extremities and trunk wall is associated with a relatively favorable outcome. However, these tumors can still recur locally and secondary dedifferentiation after recurrence has been reported. There is currently no consensus about the optimal surgical treatment of ALT. Therefore, we aimed to clarify the clinical behavior, appropriate treatment, and outcomes of ALT of the extremities and trunk wall., Methods: We retrospectively reviewed the files of 45 patients treated between 2000 and 2014 with the diagnosis of atypical lipomatous tumors of the extremities and trunk wall at our institution. The median follow-up period was 84.5 months (range, 24-183 months). The patient demographics, clinical presentation, surgical methods, margin status, and administration of radiation therapy were recorded. Patients were evaluated for their local recurrence, dedifferentiation, and postoperative complications., Results: Wide resection was performed on 11 patients, and marginal resection was performed on 34 patients. Seven patients underwent adjuvant radiotherapy. The overall recurrence rate was 17.8% (8/45), and dedifferentiation rates was 0% (0/8). The mean time to local recurrence was 5.25 years (range, 2.6-10.6 years). No ALT-related deaths occurred during the follow-up period. There were no differences in recurrence-free survival for the different surgical methods (P = 0.337) and radiotherapy (P = 0.228), whereas the R0 resection had better recurrence-free survival (P = 0.031). The postoperative complication rates were higher in wide resection group than in marginal resection group. (45.5% vs 14.7%, P = 0.048)., Conclusions: Atypical lipomatous tumors of the extremities and trunk wall are associated with a favorable overall survival and do not metastasis. Although they have a tendency to recur, the risk of secondary dedifferentiation is small. Wide resection had similar recurrence rates to marginal resection, but it might lead to more complications. Therefore, marginal resection is considered appropriate for the treatment of ALTs.
- Published
- 2016
- Full Text
- View/download PDF
205. Erratum to: Faecalibaculum rodentium gen. nov., sp. nov., isolated from the faeces of a laboratory mouse.
- Author
-
Chang DH, Rhee MS, Ahn S, Bang BH, Oh JE, Lee HK, and Kim BC
- Published
- 2016
- Full Text
- View/download PDF
206. Whole genome sequencing of "Faecalibaculum rodentium" ALO17, isolated from C57BL/6J laboratory mouse feces.
- Author
-
Lim S, Chang DH, Ahn S, and Kim BC
- Abstract
Background: Intestinal microorganisms affect host physiology, including ageing. Given the difficulty in controlling for human studies of the gut microbiome, mouse models provide an alternative avenue to study such relationships. In this study, we report on the complete genome of "Faecalibaculum rodentium" ALO17, a bacterium that was isolated from the faeces of a 9-month-old female C57BL/6J mouse. This strain will be utilized in future in vivo studies detailing the relationships between the gut microbiome and ageing., Results: The whole genome sequence of "F. rodentium" ALO17 was obtained using single-molecule, real-time (SMRT) technique on a PacBio instrument. The assembled genome consisted of 2,542,486 base pairs of double-stranded DNA with a GC content of 54.0 % and no plasmids. The genome was predicted to contain 2794 open reading frames, 55 tRNA genes, and 38 rRNA genes. The 16S rRNA gene of ALO17 was 86.9 % similar to that of Allobaculum stercoricanis DSM 13633(T), and the average overall nucleotide identity between strains ALO17 and DSM 13633(T) was 66.8 %. After confirming the phylogenetic relationship between "F. rodentium" ALO17 and A. stercoricanis DSM 13633(T), their whole genome sequences were compared, revealing that "F. rodentium" ALO17 contains more fermentation-related genes than A. stercoricanis DSM 13633(T). Furthermore, "F. rodentium" ALO17 produces higher levels of lactic acid than A. stercoricanis DSM 13633(T) as determined by high-performance liquid chromatography., Conclusion: The availability of the "F. rodentium" ALO17 whole genome sequence will enhance studies concerning the gut microbiota and host physiology, especially when investigating the molecular relationships between gut microbiota and ageing.
- Published
- 2016
- Full Text
- View/download PDF
207. Dysbiosis-induced IL-33 contributes to impaired antiviral immunity in the genital mucosa.
- Author
-
Oh JE, Kim BC, Chang DH, Kwon M, Lee SY, Kang D, Kim JY, Hwang I, Yu JW, Nakae S, and Lee HK
- Subjects
- Animals, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Colony Count, Microbial, Eosinophils drug effects, Eosinophils metabolism, Female, Herpes Genitalis immunology, Herpes Genitalis pathology, Herpes Genitalis virology, Herpesvirus 2, Human drug effects, Interferon-gamma biosynthesis, Mice, Inbred C57BL, Microbiota drug effects, Mucous Membrane immunology, Mucous Membrane virology, Peptide Hydrolases metabolism, T-Lymphocytes drug effects, Vagina drug effects, Vagina pathology, Vagina virology, Antiviral Agents immunology, Dysbiosis complications, Immunity, Innate drug effects, Interleukin-33 metabolism, Mucous Membrane pathology, Vagina immunology
- Abstract
Commensal microbiota are well known to play an important role in antiviral immunity by providing immune inductive signals; however, the consequence of dysbiosis on antiviral immunity remains unclear. We demonstrate that dysbiosis caused by oral antibiotic treatment directly impairs antiviral immunity following viral infection of the vaginal mucosa. Antibiotic-treated mice succumbed to mucosal herpes simplex virus type 2 infection more rapidly than water-fed mice, and also showed delayed viral clearance at the site of infection. However, innate immune responses, including type I IFN and proinflammatory cytokine production at infection sites, as well as induction of virus-specific CD4 and CD8 T-cell responses in draining lymph nodes, were not impaired in antibiotic-treated mice. By screening the factors controlling antiviral immunity, we found that IL-33, an alarmin released in response to tissue damage, was secreted from vaginal epithelium after the depletion of commensal microbiota. This cytokine suppresses local antiviral immunity by blocking the migration of effector T cells to the vaginal tissue, thereby inhibiting the production of IFN-γ, a critical cytokine for antiviral defense, at local infection sites. These findings provide insight into the mechanisms of homeostasis maintained by commensal bacteria, and reveal a deleterious consequence of dysbiosis in antiviral immune defense.
- Published
- 2016
- Full Text
- View/download PDF
208. Whole-genome sequence of Clostridium lituseburense L74, isolated from the larval gut of the rhinoceros beetle, Trypoxylus dichotomus.
- Author
-
Lee Y, Lim S, Rhee MS, Chang DH, and Kim BC
- Abstract
Clostridium lituseburense L74 was isolated from the larval gut of the rhinoceros beetle, Trypoxylus dichotomus collected in Yeong-dong, Chuncheongbuk-do, South Korea and subjected to whole genome sequencing on HiSeq platform and annotated on RAST. The nucleotide sequence of this genome was deposited into DDBJ/EMBL/GenBank under the accession NZ_LITJ00000000.
- Published
- 2016
- Full Text
- View/download PDF
209. Modification to the accelerator of the NBI-1B ion source for improving the injection efficiency.
- Author
-
Kim TS, Jeong SH, Chang DH, In SR, Park M, Jung BK, Lee KW, Wang SJ, Bae YS, Park HT, Kim JS, Cho W, and Choi DJ
- Abstract
Minimizing power loss of a neutral beam imposes modification of the accelerator of the ion source for further improvement of the beam optics. The beam optics can be improved by focusing beamlets. The injection efficiencies by the steering of ion beamlets are investigated numerically to find the optimum modification of the accelerator design of the NBI-1B ion source. The beam power loss was reduced by aperture displacement of three edge beamlets arrays considering power loadings on the beamline components. Successful testing and operation of the ion source at 60 keV/84% of injection efficiency led to the possibility of enhancing the system capability to a 2.4 MW power level at 100 keV/1.9 μP.
- Published
- 2016
- Full Text
- View/download PDF
210. Trends in U.S. hospitalizations and inpatient deaths from pneumonia and influenza, 1996-2011.
- Author
-
Chang DH, Bednarczyk RA, Becker ER, Hockenberry JM, Weiss PS, Orenstein WA, and Omer SB
- Subjects
- Adolescent, Adult, Aged, Child, Child, Preschool, Epidemiological Monitoring, Female, Humans, Infant, Influenza Vaccines administration & dosage, Influenza, Human mortality, Inpatients, Male, Middle Aged, Pneumococcal Vaccines administration & dosage, Pneumonia mortality, United States epidemiology, Vaccination statistics & numerical data, Young Adult, Hospital Mortality trends, Hospitalization trends, Influenza, Human epidemiology, Pneumonia epidemiology
- Abstract
Background: To reduce excess morbidity and mortality of pneumonia and influenza (PI), the Advisory Committee on Immunization Practices has recommended the use of 7-valent pneumococcal conjugate vaccine (PCV7), and incrementally expanded the target group for annual influenza vaccination of healthy persons, to ultimately include all persons ≥6 months of age without contraindications as of the 2010-2011 influenza season. We aimed to capture broader epidemiologic changes by looking at PI collectively., Methods: Using interrupted time series, we evaluated the changes in the rates of PI hospitalization and inpatient death across three periods defined according to the changes in vaccination policy. We assessed linear trends adjusting for seasonality, sex, and age group, allowing for differential impact across age groups. PI hospitalizations were defined as a principal diagnosis of PI, or a principal diagnosis of sepsis or respiratory failure, accompanied by a secondary diagnosis of PI., Results: Overall annual rates of PI hospitalizations and inpatient deaths declined by 95 per 100,000 (95% CI: 45-145) and by 4.4 per 100,000 (95% CI: 0.9-7.8), respectively. This translates to 295,000 fewer PI hospitalizations and 13,600 fewer PI inpatient deaths than expected based on the average rates from 1996 through 1999. PI hospitalizations dropped the most among seniors aged 65+ by 487 per 100,000, followed by children aged <2, by 228 per 100,000. PI inpatient deaths declined most among seniors aged 65+, by 25.3 per 100,000., Conclusions: In this nationally representative study, PI hospitalizations and inpatient deaths decreased in U.S. between 1996 and 2011. There is a temporal association with the introduction and widespread use of pneumococcal conjugate vaccines, and the expansion of the target group for annual influenza vaccination to include all persons ≥6 months of age, while it is difficult to attribute these changes directly to specific vaccines used in this era., (Copyright © 2015 Elsevier Ltd. All rights reserved.)
- Published
- 2016
- Full Text
- View/download PDF
211. The effect of Sailuotong (SLT) on neurocognitive and cardiovascular function in healthy adults: a randomised, double-blind, placebo controlled crossover pilot trial.
- Author
-
Steiner GZ, Yeung A, Liu JX, Camfield DA, Blasio FM, Pipingas A, Scholey AB, Stough C, and Chang DH
- Subjects
- Adult, Cross-Over Studies, Double-Blind Method, Drug Combinations, Female, Humans, Male, Middle Aged, Pilot Projects, Plants, Medicinal, Blood Pressure drug effects, Cognition drug effects, Crocus, Ginkgo biloba, Heart Rate drug effects, Panax
- Abstract
Background: Sailuotong (SLT) is a standardised herbal medicine formula consisting of Panax ginseng, Ginkgo biloba, and Crocus sativus, and has been designed to enhance cognitive and cardiovascular function., Methods: Using a randomised, double-blind, placebo controlled crossover design, this pilot study assessed the effect of treatment for 1 week with SLT and placebo (1 week washout period) on neurocognitive and cardiovascular function in healthy adults. Sixteen adults completed a computerised neuropsychological test battery (Compass), and had their electroencephalographic (EEG) activity and cardiovascular system function assessed. Primary outcome measures were cognitive test scores and oddball task event-related potential (ERP) component amplitudes. Secondary outcome measures were resting EEG spectral band amplitudes, and cardiovascular parameters., Results: Treatment with SLT, compared to placebo, resulted in small improvements in working memory, a slight increase in auditory target (cf. nontarget) P3a amplitude, and a decrease in auditory N1 target (cf. nontarget) amplitude. There was no effect of SLT on EEG amplitude in delta, theta, alpha, or beta bands in both eyes open and eyes closed resting conditions, or on aortic and peripheral pulse pressure, and resting heartrate., Conclusions: Findings suggest that SLT has the potential to improve working memory performance in healthy adults; a larger sample size is needed to confirm this., Trial Registration: Australia New Zealand Clinical Trials Registry Trial Registration Id: ACTRN12610000947000 .
- Published
- 2016
- Full Text
- View/download PDF
212. Erratum to: Erysipelothrix larvae sp. nov., isolated from the larval gut of the rhinoceros beetle, Trypoxylus dichotomus (Coleoptera: Scarabaeidae).
- Author
-
Bang BH, Rhee MS, Chang DH, Park DS, and Kim BC
- Published
- 2016
- Full Text
- View/download PDF
213. Induction Therapy With Antithymocyte Globulin in Patients Undergoing Cardiac Transplantation Is Associated With Decreased Coronary Plaque Progression as Assessed by Intravascular Ultrasound.
- Author
-
Azarbal B, Cheng R, Vanichsarn C, Patel JK, Czer LS, Chang DH, Kittleson MM, and Kobashigawa JA
- Subjects
- Adult, Aged, Communicable Diseases epidemiology, Communicable Diseases immunology, Coronary Artery Disease diagnostic imaging, Coronary Artery Disease mortality, Coronary Stenosis diagnostic imaging, Coronary Stenosis mortality, Coronary Vessels diagnostic imaging, Disease Progression, Female, Graft Rejection epidemiology, Graft Rejection immunology, Heart Transplantation mortality, Humans, Incidence, Logistic Models, Male, Middle Aged, Multivariate Analysis, Odds Ratio, Predictive Value of Tests, Prevalence, Proportional Hazards Models, Retrospective Studies, Risk Factors, Time Factors, Treatment Outcome, Antilymphocyte Serum therapeutic use, Coronary Artery Disease prevention & control, Coronary Stenosis prevention & control, Coronary Vessels drug effects, Heart Transplantation adverse effects, Immunosuppressive Agents therapeutic use, Plaque, Atherosclerotic, Ultrasonography, Interventional
- Abstract
Background: Antithymocyte globulin (ATG) is used as induction therapy after cardiac transplant for enhancing immunosuppression and delaying the initiation of nephrotoxic drugs. It is unknown if ATG induction is associated with decreased coronary plaque progression by intravascular ultrasound (IVUS)., Methods and Results: Patients transplanted between March 2010 and December 2012 with baseline and 1-year IVUS were included. All patients transplanted were included in a secondary analysis. Change in plaque progression was measured in a blinded fashion on matched coronary segments and contrasted between patients induced with ATG and those who were not. One hundred and three patients were included in IVUS arms. Mean age at transplant was 55.8 ± 12.6 years, and 33.0% were female. Patients induced with ATG were more sensitized (54.3% versus 14.3%). Plaque progression was attenuated in patients who received ATG by changes in maximal intimal area (1.0 ± 1.2 versus 2.3 ± 2.6 mm(2); P = 0.001), maximal percent stenosis (6.3 ± 7.9 versus 12.8 ± 12.3%; = 0.003), maximal intimal thickness (0.2 ± 0.2 versus 0.3 ± 0.3 mm; P = 0.035), and plaque volume (0.5 ± 0.7 versus 1.0 ± 1.3 mm(3)/mm; P = 0.016). Rapid plaque progression by maximal percent stenosis (≥ 20%) occurred less frequently in the ATG arm (4.3% versus 26.3; P = 0.003). Survival (P = 0.242) and any treated rejection (P = 0.166) were not statistically different between groups. Patients receiving ATG had a higher rate of first-year infection (P = 0.003), perhaps related to increased intravenous antibiotic use immediately postoperatively, and a trend toward more biopsy-proven rejection (P = 0.073)., Conclusions: Induction therapy with ATG is associated with reduced first-year coronary plaque progression as assessed by IVUS, despite an increased prevalence of sensitized patients with a trend toward more rejection., (© 2016 American Heart Association, Inc.)
- Published
- 2016
- Full Text
- View/download PDF
214. Cooperativity and Site-Selectivity of Intramolecular Hydrogen Bonds on the Fluorescence Quenching of Modified GFP Chromophores.
- Author
-
Chang DH, Ou CL, Hsu HY, Huang GJ, Kao CY, Liu YH, Peng SM, Diau EW, and Yang JS
- Abstract
This paper provides the first example of experimentally characterized hydrogen-bond cooperativity on fluorescence quenching with a modified green fluorescence protein (GFP) chromophore that contains a 6-membered C═N···H-O and a 7-membered C═O···H-O intramolecular H-bonds. Variable-temperature (1)H NMR and electronic absorption and emission spectroscopies were used to elucidate the preference of intra- vs intermolecular H-bonding at different concentrations (1 mM and 10 μM), and X-ray crystal structures provide clues of possible intermolecular H-bonding modes. In the ground state, the 6-membered H-bond is significant but the 7-membered one is rather weak. However, fluorescence quenching is dominated by the 7-membered H-bond, indicating a strengthening of the H-bond in the excited state. The H-bonding effect is more pronounced in more polar solvents, and no intermediates were observed from femtosecond fluorescence decays. The fluorescence quenching is attributed to the occurrence of diabatic excited-state proton transfer. Cooperativity of the two intramolecular H-bonds on spectral shifts and fluorescence quenching is evidenced by comparing with both the single H-bonded and the non-H-bonded counterparts. The H-bond cooperativity does not belong to the conventional patterns of σ- and π-cooperativity but a new type of polarization interactions, which demonstrates the significant interplay of H-bonds for multiple H-bonding systems in the electronically excited states.
- Published
- 2015
- Full Text
- View/download PDF
215. Faecalibaculum rodentium gen. nov., sp. nov., isolated from the faeces of a laboratory mouse.
- Author
-
Chang DH, Rhee MS, Ahn S, Bang BH, Oh JE, Lee HK, and Kim BC
- Subjects
- Anaerobiosis, Animals, Base Composition, Carbohydrates analysis, Cluster Analysis, Cytosol chemistry, DNA, Bacterial chemistry, DNA, Bacterial genetics, DNA, Ribosomal chemistry, DNA, Ribosomal genetics, Fatty Acids analysis, Firmicutes genetics, Firmicutes physiology, Hydrogen-Ion Concentration, Lactic Acid metabolism, Mice, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S genetics, Sequence Analysis, DNA, Sodium Chloride metabolism, Temperature, Feces microbiology, Firmicutes classification, Firmicutes isolation & purification
- Abstract
A novel strictly anaerobic strain, ALO17(T), was isolated from mouse faeces and found to produce lactic acid as a major metabolic end product. The isolate was observed to be Gram-stain positive, non-motile, non-spore forming small rods, oxidase and catalase negative, and to form cream-coloured colonies on DSM 104 agar plates. The NaCl range for growth was determined to be 0-2 % (w/v). The isolate was found to grow optimally at 37 °C, with 0.5 % (w/v) NaCl and at pH 7. The cell wall hydrolysates were found to contain ribose as a major sugar. The genomic DNA G+C content was determined to be 52.3 mol%. A phylogenetic analysis of the 16S rRNA gene sequence revealed that Holdemanella biformis DSM 3989(T), Faecalicoccus pleomorphus ATCC 29734(T), Faecalitalea cylindroides ATCC 27803(T), and Allobaculum stercoricanis DSM 13633(T) are closely related to the isolate (87.4, 87.3, 86.9 and 86.9 % sequence similarity), respectively. The major cellular fatty acids (>10 %) of the isolate were identified as C18:1 cis 9 FAME (36.9 %), C16:0 FAME (33.7 %) and C18:0 FAME (13.2 %). In contrast to the tested reference strains, C20:0 FAME (4.0 %) was detected only in strain ALO17(T) whilst C16:0 DMA was absent. The isolate also differed in its substrate oxidation profiles from the reference strains by being positive for D-melibiose and stachyose but negative for N-acetyl-D-galactosamine and 3-methyl-D-glucose. On the basis of polyphasic taxonomic evidence from this study, the isolate is concluded to belong to a novel genus within the family Erysipelothricaceae. We propose the name Faecalibaculum rodentium gen. nov., sp. nov. to accommodate strain ALO17(T) (=KCTC 15484(T) = JCM 30274(T)) as the type strain.
- Published
- 2015
- Full Text
- View/download PDF
216. The selectivity of responses to red-green colour and achromatic contrast in the human visual cortex: an fMRI adaptation study.
- Author
-
Mullen KT, Chang DH, and Hess RF
- Subjects
- Brain Mapping, Color, Female, Humans, Magnetic Resonance Imaging, Male, Neuropsychological Tests, Photic Stimulation methods, Visual Pathways physiology, Adaptation, Physiological physiology, Color Perception physiology, Visual Cortex physiology
- Abstract
There is controversy as to how responses to colour in the human brain are organized within the visual pathways. A key issue is whether there are modular pathways that respond selectively to colour or whether there are common neural substrates for both colour and achromatic (Ach) contrast. We used functional magnetic resonance imaging (fMRI) adaptation to investigate the responses of early and extrastriate visual areas to colour and Ach contrast. High-contrast red-green (RG) and Ach sinewave rings (0.5 cycles/degree, 2 Hz) were used as both adapting stimuli and test stimuli in a block design. We found robust adaptation to RG or Ach contrast in all visual areas. Cross-adaptation between RG and Ach contrast occurred in all areas indicating the presence of integrated, colour and Ach responses. Notably, we revealed contrasting trends for the two test stimuli. For the RG test, unselective processing (robust adaptation to both RG and Ach contrast) was most evident in the early visual areas (V1 and V2), but selective responses, revealed as greater adaptation between the same stimuli than cross-adaptation between different stimuli, emerged in the ventral cortex, in V4 and VO in particular. For the Ach test, unselective responses were again most evident in early visual areas but Ach selectivity emerged in the dorsal cortex (V3a and hMT+). Our findings support a strong presence of integrated mechanisms for colour and Ach contrast across the visual hierarchy, with a progression towards selective processing in extrastriate visual areas., (© 2015 The Authors. European Journal of Neuroscience published by Federation of European Neuroscience Societies and John Wiley & Sons Ltd.)
- Published
- 2015
- Full Text
- View/download PDF
217. Web-Based Immersive Virtual Patient Simulators: Positive Effect on Clinical Reasoning in Medical Education.
- Author
-
Kleinert R, Heiermann N, Plum PS, Wahba R, Chang DH, Maus M, Chon SH, Hoelscher AH, and Stippel DL
- Subjects
- Humans, Education, Medical methods, Internet statistics & numerical data, Patient Simulation, Problem-Based Learning methods
- Abstract
Background: Clinical reasoning is based on the declarative and procedural knowledge of workflows in clinical medicine. Educational approaches such as problem-based learning or mannequin simulators support learning of procedural knowledge. Immersive patient simulators (IPSs) go one step further as they allow an illusionary immersion into a synthetic world. Students can freely navigate an avatar through a three-dimensional environment, interact with the virtual surroundings, and treat virtual patients. By playful learning with IPS, medical workflows can be repetitively trained and internalized. As there are only a few university-driven IPS with a profound amount of medical knowledge available, we developed a university-based IPS framework. Our simulator is free to use and combines a high degree of immersion with in-depth medical content. By adding disease-specific content modules, the simulator framework can be expanded depending on the curricular demands. However, these new educational tools compete with the traditional teaching, Objective: It was our aim to develop an educational content module that teaches clinical and therapeutic workflows in surgical oncology. Furthermore, we wanted to examine how the use of this module affects student performance., Methods: The new module was based on the declarative and procedural learning targets of the official German medical examination regulations. The module was added to our custom-made IPS named ALICE (Artificial Learning Interface for Clinical Education). ALICE was evaluated on 62 third-year students., Results: Students showed a high degree of motivation when using the simulator as most of them had fun using it. ALICE showed positive impact on clinical reasoning as there was a significant improvement in determining the correct therapy after using the simulator. ALICE positively impacted the rise in declarative knowledge as there was improvement in answering multiple-choice questions before and after simulator use., Conclusions: ALICE has a positive effect on knowledge gain and raises students' motivation. It is a suitable tool for supporting clinical education in the blended learning context.
- Published
- 2015
- Full Text
- View/download PDF
218. Design, Realization, and First Validation of an Immersive Web-Based Virtual Patient Simulator for Training Clinical Decisions in Surgery.
- Author
-
Kleinert R, Heiermann N, Wahba R, Chang DH, Hölscher AH, and Stippel DL
- Subjects
- Adult, Female, Humans, Male, Simulation Training organization & administration, Young Adult, Clinical Competence, Clinical Decision-Making, General Surgery education, Internet, Simulation Training methods, User-Computer Interface
- Abstract
Background: Immersive patient simulators (IPS) allow an illusionary immersion into a synthetic world where the user can freely navigate through a 3-dimensional environment similar to computer games. Playful learning with IPS allows internalization of medical workflows without harming real patients. Ideally, IPS show high student acceptance and can have positive effect on knowledge gain. Development of IPS with high technical quality is resource intensive. Therefore most of the "high-fidelity" IPS are commercially driven. Usage of IPS in the daily curriculum is still rare. There is no academic-driven simulator that is freely accessible to every student and combines high immersion grade with a profound amount of medical content., Aim: Therefore it was our aim to develop an academic-driven IPS prototype that is free to use and combines a high immersion grade with profound medical content. In addition, a first validation of the prototype was conducted., Methods: The conceptual design included definition of the following parameters: amount of curricular content, grade of technical quality, availability, and level of validation. A preliminary validation was done with 25 students. Students' opinion about acceptance was evaluated by a Likert-scale questionnaire. Effect on knowledge gain was determined by testing concordance and predictive validity., Results: A custom-made simulator prototype (Artificial learning interface for clinical education [ALICE]) displays a virtual clinic environment that can be explored from a first-person view similar to a video game. By controlling an avatar, the user navigates through the environment, is able to treat virtual patients, and faces the consequence of different decisions. ALICE showed high students' acceptance. There was positive correlation for concordance validity and predictive validity. Simulator usage had positive effect on reproduction of trained content and declarative knowledge., Conclusions: We successfully developed a university-based, IPS prototype (ALICE) with profound medical content. ALICE is a nonprofit simulator, easy to use, and showed high students' acceptance; thus it potentially provides an additional tool for supporting student teaching in the daily clinical curriculum., (Copyright © 2015 Association of Program Directors in Surgery. Published by Elsevier Inc. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
219. Prostate-Specific Membrane Antigen PET/CT in Splenic Sarcoidosis.
- Author
-
Kobe C, Maintz D, Fischer T, Drzezga A, and Chang DH
- Subjects
- Aged, Choline, Gallium Isotopes, Gallium Radioisotopes, Humans, Magnetic Resonance Imaging, Male, Multimodal Imaging, Prostatic Neoplasms diagnostic imaging, Spleen pathology, Edetic Acid analogs & derivatives, Oligopeptides, Positron-Emission Tomography, Prostatic Neoplasms pathology, Radiopharmaceuticals, Sarcoidosis diagnostic imaging, Spleen diagnostic imaging, Tomography, X-Ray Computed
- Abstract
A 65-year-old man who had prostate cancer presented with slightly progressive prostate-specific antigen values. In this situation of biochemical relapse, prostate-specific membrane antigen (PSMA) PET/CT has proven to be superior to choline PET. The Ga-PSMA PET/CT of our patient revealed PSMA-positive tissue in the spleen. Although the localization was not typical for metastases, metastasis could not be excluded because of the intense focal tracer uptake. A supplementary MRI was performed but also failed to rule out a malignant origin. Finally, biopsy confirmed benign disease in the spleen in the form of granulomatous disease.
- Published
- 2015
- Full Text
- View/download PDF
220. Current diagnostic and treatment strategies for cardiac allograft vasculopathy.
- Author
-
Chang DH and Kobashigawa JA
- Subjects
- Allografts, Heart Diseases etiology, Humans, Reoperation, Heart Diseases therapy, Heart Transplantation methods, Quality of Life
- Abstract
Heart transplantation remains the most durable treatment for end-stage heart disease that is not amenable to coronary revascularization or anti-arrhythmic therapies. Cardiac allograft vasculopathy (CAV) remains one of the main contributors to morbidity and mortality post heart transplant. Nonimmune and immune factors that influence CAV can be modified after a heart transplant. Given the potential silent nature of CAV in the denervated heart, early diagnosis of CAV is critical. Diagnosis and treatment of CAV remain key areas of investigation to improve patient care and quality of life post heart transplant. While repeat heart transplantation is an option in the treatment of significant CAV, outcomes following retransplantation are inferior to outcomes following first heart transplant. Repeat heart transplantation is limited to a select group of patients after index heart transplant.
- Published
- 2015
- Full Text
- View/download PDF
221. Inhibitory mechanism of Korean Red Ginseng on GM-CSF expression in UVB-irradiated keratinocytes.
- Author
-
Chung I, Lee J, Park YS, Lim Y, Chang DH, Park J, and Hwang JS
- Abstract
Background: UV-irradiated keratinocytes secrete various proinflammatory cytokines. UV-induced skin damage is mediated by growth factors and proinflammatory cytokines such as granulocyte macrophage colony stimulating factor (GM-CSF). In a previous study, we found that the saponin of Korean Red Ginseng (SKRG) decreased the expression of GM-CSF in UVB-irradiated SP-1 keratinocytes. In this study, we attempted to find the inhibitory mechanism of SKRG on UVB-induced GM-CSF expression in SP-1 keratinocytes., Methods: We investigated the inhibitory mechanism of SKRG and ginsenosides from Panax ginseng on UVB-induced GM-CSF expression in SP-1 keratinocytes., Results: Treatment with SKRG decreased the expression of GM-CSF mRNA and protein induced by irradiation of UVB in SP-1 keratinocytes. The phosphorylation of ERK was induced by UVB at 10 min, and decreased with SKRG treatment in SP-1 keratinocytes. In addition, treatment with SKRG inhibited the UVB-induced phosphorylation of epidermal growth factor receptor (EGFR), which is known to be an upstream signal of ERK. From these results, we found that the inhibition of GM-CSF expression by SKRG was derived from the decreased phosphorylation of EGFR. To identify the specific compound composing SKRG, we tested fifteen kinds of ginsenosides. Among these compounds, ginsenoside-Rh3 decreased the expression of GM-CSF protein and mRNA in SP-1 keratinocytes., Conclusion: Taken together, we found that treatment with SKRG decreased the phosphorylation of EGFR and ERK in UVB-irradiated SP-1 keratinocytes and subsequently inhibited the expression of GM-CSF. Furthermore, we identified ginsenoside-Rh3 as the active saponin in Korean Red Ginseng.
- Published
- 2015
- Full Text
- View/download PDF
222. Epidemiology of digital amputation and replantation in Taiwan: A population-based study.
- Author
-
Chang DH, Ye SY, Chien LC, and Ma H
- Subjects
- Adult, Aged, Female, Humans, Male, Middle Aged, Taiwan epidemiology, Treatment Failure, Amputation, Surgical statistics & numerical data, Replantation statistics & numerical data, Thumb surgery
- Abstract
Background: Publications on digital amputation and replantation have been mostly derived from case series in high-volume hand surgery practices, and epidemiological studies are few. This study used a population-based dataset to illustrate the incidence of digital amputation, patient and hospital characteristics, and their relationships with replantation., Methods: A claim for reimbursement dataset (2008) was provided as a research database by the Bureau of National Health Insurance, Taiwan. Patients with ICD-9-CM coded as digital amputation (885 and 886) were included. These were cross-referenced with procedure codes for replantation procedures (84.21 and 84.22). We defined the patients who underwent thumb replantation (84.21) and thumb amputation (84.01) during a single hospitalization as replantation failure. Patient and hospital characteristics were studied with statistical analysis., Results: In total, 2358 patients with digital amputation were admitted (1859 male, 499 female), mean age 39.2 ± 15.5 years. The incidence was 10.2/100,000 person-years. The highest incidence was 14.7/100,000 person-years in the age group 45-54 years. Machinery and powered hand tools caused 68.8% of digital amputations. Thumb amputation [odds ratio (OR): 1.35, p = 0.01], private hospital (OR: 1.40, p = 0.01), medical center (OR: 2.38, p < 0.001), regional hospital (OR: 2.41, p < 0.001) and hospitals with an annual volume >20 digital amputations (OR: 4.23, p < 0.001) were associated with higher attempt rates for replantation. Elderly patients (age >65 years) had higher risk of thumb replantation failure (OR: 32.30, p = 0.045), while hospitals with >20 annual replantations had lower risk (OR: 0.11, p = 0.02)., Conclusion: Our study of the National Health Insurance database characterized the epidemiology of digital amputation patients undergoing replantation and the facilities in Taiwan where these procedures are performed. The hospitals treating more digital amputation patients had higher attempt rates and lower thumb failure rates., (Copyright © 2015. Published by Elsevier Taiwan.)
- Published
- 2015
- Full Text
- View/download PDF
223. Radiation Dose Reduction in Computed Tomography-Guided Lung Interventions using an Iterative Reconstruction Technique.
- Author
-
Chang DH, Hiss S, Mueller D, Hellmich M, Borggrefe J, Bunck AC, Maintz D, and Hackenbroch M
- Subjects
- Adult, Aged, Aged, 80 and over, Artifacts, Feasibility Studies, Female, Fiducial Markers, Humans, Image Processing, Computer-Assisted, Lung Diseases pathology, Lung Neoplasms pathology, Male, Middle Aged, Radiology, Interventional, Image-Guided Biopsy methods, Lung Diseases diagnostic imaging, Lung Diseases radiotherapy, Lung Neoplasms diagnostic imaging, Lung Neoplasms radiotherapy, Radiation Dosage, Radiotherapy, Image-Guided methods, Tomography, X-Ray Computed adverse effects
- Abstract
Purpose: To compare the radiation doses and image qualities of computed tomography (CT)-guided interventions using a standard-dose CT (SDCT) protocol with filtered back projection and a low-dose CT (LDCT) protocol with both filtered back projection and iterative reconstruction., Materials and Methods: Image quality and radiation doses (dose-length product and CT dose index) were retrospectively reviewed for 130 patients who underwent CT-guided lung interventions. SDCT at 120 kVp and automatic mA modulation and LDCT at 100 kVp and a fixed exposure were each performed for 65 patients. Image quality was objectively evaluated as the contrast-to-noise ratio and subjectively by two radiologists for noise impression, sharpness, artifacts and diagnostic acceptability on a four-point scale., Results: The groups did not significantly differ in terms of diagnostic acceptability and complication rate. LDCT yielded a median 68.6% reduction in the radiation dose relative to SDCT. In the LDCT group, iterative reconstruction was superior to filtered back projection in terms of noise reduction and subjective image quality. The groups did not differ in terms of beam hardening artifacts., Conclusion: LDCT was feasible for all procedures and yielded a more than two-thirds reduction in radiation exposure while maintaining overall diagnostic acceptability, safety and precision. The iterative reconstruction algorithm is preferable according to the objective and subjective image quality analyses., Key Points: Implementation of a low-dose computed tomography (LDCT) protocol for lung interventions is feasible and safe. LDCT protocols yield a significant reduction (more than 2/3) in radiation exposure. Iterative reconstruction algorithms considerably improve the image quality in LDCT protocols., (© Georg Thieme Verlag KG Stuttgart · New York.)
- Published
- 2015
- Full Text
- View/download PDF
224. CXCR4 attenuates cardiomyocytes mitochondrial dysfunction to resist ischaemia-reperfusion injury.
- Author
-
Cai WF, Kang K, Huang W, Liang JL, Feng YL, Liu GS, Chang DH, Wen ZL, Paul C, Xu M, Millard RW, and Wang Y
- Subjects
- Adenoviridae metabolism, Animals, Calcium pharmacology, Cardiotonic Agents pharmacology, Cell Death drug effects, Cell Hypoxia drug effects, Cytosol drug effects, Cytosol metabolism, Mitochondria, Heart drug effects, Mitochondria, Heart pathology, Myocardial Reperfusion Injury pathology, Myocytes, Cardiac drug effects, Myocytes, Cardiac pathology, Oxidative Stress drug effects, Rats, Sprague-Dawley, STAT3 Transcription Factor metabolism, Mitochondria, Heart metabolism, Myocardial Reperfusion Injury metabolism, Myocytes, Cardiac metabolism, Receptors, CXCR4 metabolism
- Abstract
The chemokine (C-X-C motif) receptor 4 (CXCR4) is expressed on native cardiomyocytes and can modulate isolated cardiomyocyte contractility. This study examines the role of CXCR4 in cardiomyocyte response to ischaemia-reperfusion (I/R) injury. Isolated adult rat ventricular cardiomyocytes were subjected to hypoxia/reoxygenation (H/R) to simulate I/R injury. In response to H/R injury, the decrease in CXCR4 expression was associated with dysfunctional energy metabolism indicated by an increased adenosine diphosphate/adenosine triphosphate (ADP/ATP) ratio. CXCR4-overexpressing cardiomyocytes were used to determine whether such overexpression (OE) can prevent bio-energetic disruption-associated cell death. CXCR4 OE was performed with adenoviral infection with CXCR4 encoding-gene or non-translated nucleotide sequence (Control). The increased CXCR4 expression was observed in cardiomyocytes post CXCR4-adenovirus transduction and this OE significantly reduced the cardiomyocyte contractility under basal conditions. Although the same extent of H/R-provoked cytosolic calcium overload was measured, the hydrogen peroxide-induced decay of mitochondrial membrane potential was suppressed in CXCR4 OE group compared with control group, and the mitochondrial swelling was significantly attenuated in CXCR4 group, implicating that CXCR4 OE prevents permeability transition pore opening exposure to overload calcium. Interestingly, this CXCR4-induced mitochondrial protective effect is associated with the enhanced signal transducer and activator of transcription 3 (expression in mitochondria. Consequently, in the presence of H/R, mitochondrial dysfunction was mitigated and cardiomyocyte death was decreased to 65% in the CXCR4 OE group as compared with the control group. I/R injury leads to the reduction in CXCR4 in cardiomyocytes associated with the dysfunctional energy metabolism, and CXCR4 OE can alleviate mitochondrial dysfunction to improve cardiomyocyte survival., (© 2015 The Authors. Journal of Cellular and Molecular Medicine published by John Wiley & Sons Ltd and Foundation for Cellular and Molecular Medicine.)
- Published
- 2015
- Full Text
- View/download PDF
225. Reply: To PMID 26169004.
- Author
-
Franke M, Winand S, Chang DH, Wille S, Maintz D, and Bangard C
- Subjects
- Female, Humans, Male, Urinary Fistula surgery
- Published
- 2015
- Full Text
- View/download PDF
226. Urinary Tract Fistulas: Transrenal Reversible Ureteral Occlusion With Detachable Semicompliant Balloons.
- Author
-
Franke M, Winand S, Chang DH, Wille S, Maintz D, and Bangard C
- Subjects
- Adult, Aged, Equipment Design, Feasibility Studies, Female, Humans, Male, Middle Aged, Retrospective Studies, Ureter, Urologic Surgical Procedures instrumentation, Urologic Surgical Procedures methods, Urinary Fistula surgery
- Abstract
Objective: To evaluate transrenal reversible ureteral occlusion with detachable balloons in patients with treatment-refractory urinary tract fistulas., Methods: From September 2009 to September 2013, reversible occlusion of 18 ureters (7 men, 3 women; 27-74 years) with treatment-refractory urinary leakage mostly because of tumor disease or iatrogenic surgical injury was performed. Nephrostomy was exchanged fluoroscopically into an 8F or 9F sheath, which was introduced into the ureter to the point of intended balloon inflation. The prepared semicompliant balloon on a special microcatheter was introduced into the sheath, inflated, and detached. A nephrostomy tube was placed in the pelvicalyceal system. After healing of the fistulas, urinary flow was restored by transureteral removal or computed tomography-guided percutaneous puncture of the balloons., Results: Hundred percent successful placement of the balloons and initial urinary fistula occlusion was achieved (18 of 18 ureters). One patient was lost during follow-up. Six of the remaining 9 patients needed reocclusion because of balloon dislocation or deflation (secondary technical success 83%; 5 of 6 ureters). A z-shaped ureter made reocclusion unsuccessful. Mean duration of ureteral occlusion was 74 days (5-250 days). After healing of the fistulas, intentional ureteral recanalization by percutaneous puncture or transureteral balloon removal was feasible. Anterograde urination was achieved in 5 of 9 patients (clinical success rate 55%). Four fistulas did not heal. Two patients died from their underlying disease., Conclusion: Transrenal reversible off-label ureteral occlusion with semicompliant detachable balloons is feasible with a high technical success rate. Long-term ureteral occlusion can be achieved in nearly all patients with a moderate clinical success rate in heavily diseased patients., (Copyright © 2015 Elsevier Inc. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
227. AKAP4 is a circulating biomarker for non-small cell lung cancer.
- Author
-
Gumireddy K, Li A, Chang DH, Liu Q, Kossenkov AV, Yan J, Korst RJ, Nam BT, Xu H, Zhang L, Ganepola GA, Showe LC, and Huang Q
- Subjects
- Adult, Aged, Aged, 80 and over, Area Under Curve, Female, Humans, Male, Middle Aged, Polymerase Chain Reaction, ROC Curve, Sensitivity and Specificity, A Kinase Anchor Proteins blood, Biomarkers, Tumor blood, Carcinoma, Non-Small-Cell Lung blood, Lung Neoplasms blood
- Abstract
Cancer testis antigens (CTAs) are widely expressed in tumor tissues, circulating tumor cells (CTCs) and in cancer derived exosomes that are frequently engulfed by lymphoid cells. To determine whether tumor derived CTA mRNAs could be detected in RNA from purified peripheral blood mononuclear cells (PBMC) of non-small cell lung cancer (NSCLC) patients, we assayed for the expression of 116 CTAs in PBMC RNA in a discovery set and identified AKAP4 as a potential NSCLC biomarker. We validated AKAP4 as a highly accurate biomarker in a cohort of 264 NSCLCs and 135 controls from 2 different sites including a subset of controls with high risk lung nodules. When all (264) lung cancers were compared with all (135) controls the area under the ROC curve (AUC) was 0.9714. When 136 stage I NSCLC lung cancers are compared with all controls the AUC is 0.9795 and when all lung cancer patients were compared to 27 controls with histologically confirmed benign lung nodules, a comparison of significant clinical importance, the AUC was 0.9825. AKAP4 expression increases significantly with tumor stage, but independent of age, gender, smoking history or cancer subtype. Follow-up studies in a small number of resected NSCLC patients revealed a decrease of AKAP4 expression post-surgical resection that remained low in patients in remission and increased with tumor recurrence. AKAP4 is a highly accurate biomarker for the detection of early stage lung cancer.
- Published
- 2015
- Full Text
- View/download PDF
228. [A rare complication: acute ischemic stomach necrosis in non-occlusive mesenteric ischemia].
- Author
-
Franke M and Chang DH
- Subjects
- Acute Disease, Fatal Outcome, Female, Humans, Intestines pathology, Liver injuries, Middle Aged, Myocardial Infarction complications, Myocardial Infarction therapy, Necrosis, Postoperative Complications diagnostic imaging, Rupture, Spontaneous, Shock, Hemorrhagic complications, Shock, Hemorrhagic therapy, Splenectomy, Splenic Rupture complications, Splenic Rupture therapy, Subphrenic Abscess diagnostic imaging, Extravasation of Diagnostic and Therapeutic Materials diagnostic imaging, Gastric Fistula diagnostic imaging, Ischemia diagnostic imaging, Mesenteric Ischemia complications, Mesenteric Ischemia diagnostic imaging, Stomach blood supply, Stomach pathology, Stomach Rupture diagnostic imaging, Tomography, X-Ray Computed
- Published
- 2015
- Full Text
- View/download PDF
229. 3D immersive patient simulators and their impact on learning success: a thematic review.
- Author
-
Kleinert R, Wahba R, Chang DH, Plum P, Hölscher AH, and Stippel DL
- Subjects
- Adult, Computer Simulation, Feasibility Studies, Humans, Learning, Students, Medical, User-Computer Interface, Education, Medical, Undergraduate methods, Patient Simulation
- Abstract
Background: Immersive patient simulators (IPSs) combine the simulation of virtual patients with a three-dimensional (3D) environment and, thus, allow an illusionary immersion into a synthetic world, similar to computer games. Playful learning in a 3D environment is motivating and allows repetitive training and internalization of medical workflows (ie, procedural knowledge) without compromising real patients. The impact of this innovative educational concept on learning success requires review of feasibility and validity., Objective: It was the aim of this paper to conduct a survey of all immersive patient simulators currently available. In addition, we address the question of whether the use of these simulators has an impact on knowledge gain by summarizing the existing validation studies., Methods: A systematic literature search via PubMed was performed using predefined inclusion criteria (ie, virtual worlds, focus on education of medical students, validation testing) to identify all available simulators. Validation testing was defined as the primary end point., Results: There are currently 13 immersive patient simulators available. Of these, 9 are Web-based simulators and represent feasibility studies. None of these simulators are used routinely for student education. The workstation-based simulators are commercially driven and show a higher quality in terms of graphical quality and/or data content. Out of the studies, 1 showed a positive correlation between simulated content and real content (ie, content validity). There was a positive correlation between the outcome of simulator training and alternative training methods (ie, concordance validity), and a positive coherence between measured outcome and future professional attitude and performance (ie, predictive validity)., Conclusions: IPSs can promote learning and consolidation of procedural knowledge. The use of immersive patient simulators is still marginal, and technical and educational approaches are heterogeneous. Academic-driven IPSs could possibly enhance the content quality, improve the validity level, and make this educational concept accessible to all medical students.
- Published
- 2015
- Full Text
- View/download PDF
230. Reply: To PMID 25127696.
- Author
-
Chang DH and Waring GO 4th
- Subjects
- Humans, Anatomic Landmarks, Cornea anatomy & histology, Light, Reflex physiology, Refraction, Ocular, Refractive Errors physiopathology, Refractive Surgical Procedures instrumentation
- Published
- 2015
- Full Text
- View/download PDF
231. Elevated immune monitoring early after cardiac transplantation is associated with increased plaque progression by intravascular ultrasound.
- Author
-
Cheng R, Azarbal B, Yung A, Chang DH, Patel JK, and Kobashigawa JA
- Subjects
- Disease Progression, Female, Follow-Up Studies, Graft Rejection immunology, Humans, Male, Middle Aged, Plaque, Atherosclerotic etiology, Plaque, Atherosclerotic immunology, Retrospective Studies, Coronary Vessels diagnostic imaging, Graft Rejection diagnostic imaging, Heart Transplantation, Immunity, Innate, Monitoring, Immunologic methods, Plaque, Atherosclerotic diagnostic imaging, Ultrasonography, Interventional methods
- Abstract
Background: Immune monitoring (IM) has not been shown to be associated with cardiac allograft vasculopathy (CAV)., Methods: Maximal intimal area, average percent stenosis, plaque volume, and maximal intimal thickness (MIT) were measured for matched baseline and one-yr IVUS segments in a blinded fashion. Patients were divided into quartiles by IM scores and outcomes compared. Optimal IM cutoff was determined., Results: IM assays were measured at 63.7 ± 16.4 d after transplantation in fifty patients. Progression of maximal intimal area (p = 0.005), average percent stenosis (p < 0.001), plaque volume (p = 0.005), and MIT (p = 0.001) were increased across the quartiles. An optimal IM assay cutoff of 406.0 ng ATP/mL demonstrated a sensitivity of 66.7% and specificity of 94.3% for predicting rapid progression of MIT ≥ 0.5 mm. Mean IM scores for Group 1 vs. Group 2 were 176.4 ± 102.2 and 616.3 ± 239.5 ngATP/mL, respectively. Rapid progression of MIT ≥ 0.5 mm occurred in 5/38 patients (13.2%) in Group 1 vs. 10/12 patients (83.3%) in Group 2 (p < 0.001). The risk ratio for rapid progression with elevated IM was 11.7 (p < 0.001)., Conclusion: Elevated early IM scores are associated with progression of CAV by IVUS. These findings suggest the potential of IM for tailoring of immunosuppressive regimens to minimize the progression of CAV in high-risk patients., (© 2014 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.)
- Published
- 2015
- Full Text
- View/download PDF
232. Erysipelothrix larvae sp. nov., isolated from the larval gut of the rhinoceros beetle, Trypoxylus dichotomus (Coleoptera: Scarabaeidae).
- Author
-
Bang BH, Rhee MS, Chang DH, Park DS, and Kim BC
- Subjects
- Anaerobiosis, Animals, Bacterial Typing Techniques, Base Composition, Carbohydrates analysis, Cluster Analysis, Coleoptera microbiology, Cytosol chemistry, DNA, Bacterial chemistry, DNA, Bacterial genetics, DNA, Ribosomal chemistry, DNA, Ribosomal genetics, Fatty Acids analysis, Gastrointestinal Tract microbiology, Glycolipids analysis, Hydrogen-Ion Concentration, Korea, Larva microbiology, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids analysis, Phylogeny, Quinones analysis, RNA, Ribosomal, 16S genetics, Sequence Analysis, DNA, Sodium Chloride metabolism, Temperature, Erysipelothrix classification, Erysipelothrix isolation & purification
- Abstract
A novel, Gram-stain positive, facultative anaerobic, non-motile and straight to curve rod shaped bacterium, strain LV19(T) was isolated from the larval gut of the rhinoceros beetle, Trypoxylus dichotomus, which was collected from Yeong-dong, Chuncheongbuk-do, South Korea. The colonies of the new isolate were convex, circular, cream white in color and 1-2 mm in diameter after 3 days incubation on Tryptic Soy Agar at 37 °C. Based on the 16S rRNA gene sequence similarity, the new isolate was most closely related to Erysipelothrix inopinata MF-EP02(T), E. rhusiopathiae ATCC 19414 (T) and E. tonsillarum T-305(T) (94.8, 93.8 and 93.7 % similarity, respectively). Strain LV19(T) grew optimally at 37 °C, at pH 8.0 and in the presence of 0.5 % (w/v) NaCl. Oxidase activity and catalase activity were negative. The major cellular fatty acids (>10 %) were C18:2 cis-9,12 (28.9 %), C18:1 cis-9 (22.3 %), C16:0 (22.2 %) and C18:0 (18.5 %). The cell-wall hydrolysates contained ribose as a major sugar. Major polar lipids were phosphatidylglycerol and three unidentified glycolipids. No quinone was detected. The G+C content of the genomic DNA was 36.3 mol%. The levels of DNA-DNA relatedness between strain LV19(T) and all the reference strains were less than 20 %. On the basis of polyphasic evidence from this study, the isolate is considered to represent a novel species of the genus Erysipelothrix, for which the name Erysipelothrix larvae sp. nov. is proposed; the type strain is LV19(T) (=KCTC 33523(T) = DSM 28480(T)).
- Published
- 2015
- Full Text
- View/download PDF
233. Draft Genome Sequence of Acinetobacter sp. HR7, Isolated from Hanwoo, Korean Native Cattle.
- Author
-
Chang DH, Rhee MS, Jeong H, Kim S, and Kim BC
- Abstract
Acinetobacter species have been reported as opportunistic pathogens. Here, we report the draft genome sequence of Acinetobacter sp. HR7 isolated from the rumen of cannulated Korean native cattle (Hanwoo; Bos taurus coreanae)., (Copyright © 2015 Chang et al.)
- Published
- 2015
- Full Text
- View/download PDF
234. Draft Genome Sequence of Bordetella trematum Strain HR18.
- Author
-
Chang DH, Jin TE, Rhee MS, Jeong H, Kim S, and Kim BC
- Abstract
The genus Bordetella is reportedly a human or animal pathogen and environmental microbe. We report the draft genome sequence of Bordetella trematum strain HR18, which was isolated from the rumen of Korean native cattle (Hanwoo; Bos taurus coreanae). It is the first genome sequence of a Bordetella sp. isolated from the rumen of cattle., (Copyright © 2015 Chang et al.)
- Published
- 2015
- Full Text
- View/download PDF
235. VHL gene mutation analysis of a Chinese family with non- syndromic pheochromocytomas and patients with apparently sporadic pheochromocytoma.
- Author
-
Zhang B, Qian J, Chang DH, Wang YM, Zhou DH, and Qiao GM
- Subjects
- Adolescent, Adult, Child, Cytoskeletal Proteins, DNA Mutational Analysis methods, Female, Genetic Testing methods, Humans, Male, Middle Aged, Molecular Chaperones, Pedigree, Young Adult, von Hippel-Lindau Disease genetics, Adrenal Gland Neoplasms genetics, Asian People genetics, Carrier Proteins genetics, Genetic Predisposition to Disease genetics, Mutation genetics, Pheochromocytoma genetics
- Abstract
Objective: The Von Hippel-Lindau syndrome (VHLD), an inherited neoplastic syndrome predisposing to central nervous system hemangioblastoma (CNS), pheochromocytoma (PCC), renal cell carcinoma(RCC), retinal hemangioma (RA) and renal cysts, is caused by mutations or deletions of the VHL tumor-suppressor gene. To assess VHL genotype-phenotype correlations with function of pVHL a gene mutation analysis of members in a Chinese family with non-syndromic PCCs and individuals with apparently sporadic pheochromocytoma (ASP) was performed., Materials and Methods: DNA samples of 20 members from the Chinese family with non-syndromic PCCs and 41 patients with ASP were analyzed by polymerase chain reaction and direct sequencing, confirmed by Taqman probe., Results: Three novel mutations (H125P, 623(?TTTGTtG) and R120T) were identified in the Chinese family and in 3 among 41 ASP patients. The mutations were all located in exon 2 of VHL gene encoding β-domain of pVHL. The tumor type in H125P carriers and R120T carriers was VHL type 2C. And 623(?TTTGTtG) carriers presented VHL type 2B or type 2C., Conclusions: VHL gene abnormalities were identified in the Chinese family with non-syndromic PCCs and patients with APS, resulting in dysfunction of pVHL. H125P and R120T could be associated with VHL type 2C, while 623(?TTTGTtG) might be linked with VHL type 2B or type 2C. Not only is the genetic analysis helpful for early diagnosis and treatment of patients with VHLD, it is also benefitial for research into VHLD pathogenesis.
- Published
- 2015
- Full Text
- View/download PDF
236. The subject-fixated coaxially sighted corneal light reflex: a clinical marker for centration of refractive treatments and devices.
- Author
-
Chang DH and Waring GO 4th
- Subjects
- Cornea physiology, Cornea surgery, Corneal Topography, Equipment Design, Humans, Anatomic Landmarks, Cornea anatomy & histology, Light, Reflex physiology, Refraction, Ocular, Refractive Errors physiopathology, Refractive Surgical Procedures instrumentation
- Abstract
Purpose: To describe the inconsistencies in definition, application, and usage of the ocular reference axes (optical axis, visual axis, line of sight, pupillary axis, and topographic axis) and angles (angle kappa, lambda, and alpha) and to propose a precise, reproducible, clinically defined reference marker and axis for centration of refractive treatments and devices., Design: Perspective., Methods: Literature review of papers dealing with ocular reference axes, angles, and centration., Results: The inconsistent definitions and usage of the current ocular axes, as derived from eye models, limit their clinical utility. With a clear understanding of Purkinje images and a defined alignment of the observer, light source/fixation target, and subject eye, the subject-fixated coaxially sighted corneal light reflex can be a clinically useful reference marker. The axis formed by connecting the subject-fixated coaxially sighted corneal light reflex and the fixation point, the subject-fixated coaxially sighted corneal light reflex axis, is independent of pupillary dilation and phakic status of the eye. The relationship of the subject-fixated coaxially sighted corneal light reflex axis to a refined definition of the visual axis without reference to nodal points, the foveal-fixation axis, is discussed. The displacement between the subject-fixated coaxially sighted corneal light reflex and pupil center is described not by an angle, but by a chord, here termed chord mu. The application of the subject-fixated coaxially sighted corneal light reflex to the surgical centration of refractive treatments and devices is discussed., Conclusion: As a clinically defined reference marker, the subject-fixated coaxially sighted corneal light reflex avoids the shortcomings of current ocular axes for clinical application and may contribute to better consensus in the literature and improved patient outcomes., (Copyright © 2014 Elsevier Inc. All rights reserved.)
- Published
- 2014
- Full Text
- View/download PDF
237. Training transfers the limits on perception from parietal to ventral cortex.
- Author
-
Chang DH, Mevorach C, Kourtzi Z, and Welchman AE
- Subjects
- Electrophysiological Phenomena, Humans, Neuroimaging, Transcranial Magnetic Stimulation, Cerebral Cortex physiology, Learning, Psychomotor Performance physiology, Visual Perception physiology
- Abstract
Visually guided behavior depends on (1) extracting and (2) discriminating signals from complex retinal inputs, and these perceptual skills improve with practice. For instance, training on aerial reconnaissance facilitated World War II Allied military operations; analysts pored over stereoscopic photographs, becoming expert at (1) segmenting pictures into meaningful items to break camouflage from (noisy) backgrounds, and (2) discriminating fine details to distinguish V-weapons from innocuous pylons. Training is understood to optimize neural circuits that process scene features (e.g., orientation) for particular purposes (e.g., judging position). Yet learning is most beneficial when it generalizes to other settings and is critical in recovery after adversity, challenging understanding of the circuitry involved. Here we used repetitive transcranial magnetic stimulation (rTMS) to infer the functional organization supporting learning generalization in the human brain. First, we show dissociable contributions of the posterior parietal cortex (PPC) versus lateral occipital (LO) circuits: extracting targets from noise is disrupted by PPC stimulation, in contrast to judging feature differences, which is affected by LO rTMS. Then, we demonstrate that training causes striking changes in this circuit: after feature training, identifying a target in noise is not disrupted by PPC stimulation but instead by LO stimulation. This indicates that training shifts the limits on perception from parietal to ventral brain regions and identifies a critical neural circuit for visual learning. We suggest that generalization is implemented by supplanting dynamic processing conducted in the PPC with specific feature templates stored in the ventral cortex., (Copyright © 2014 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2014
- Full Text
- View/download PDF
238. True lumen reentry with the OUTBACK catheter in chronic occlusions of the subclavian artery.
- Author
-
Bangard C, Franke M, Maintz D, and Chang DH
- Subjects
- Arterial Occlusive Diseases diagnosis, Arterial Occlusive Diseases physiopathology, Chronic Disease, Constriction, Pathologic, Equipment Design, Humans, Ischemia diagnosis, Ischemia physiopathology, Male, Middle Aged, Radiography, Stents, Treatment Outcome, Vascular Patency, Arterial Occlusive Diseases therapy, Endovascular Procedures instrumentation, Ischemia therapy, Subclavian Artery diagnostic imaging, Subclavian Artery physiopathology, Upper Extremity blood supply, Vascular Access Devices
- Published
- 2014
- Full Text
- View/download PDF
239. August consultation #4.
- Author
-
Chang DH
- Subjects
- Female, Humans, Artificial Lens Implant Migration surgery, Lenses, Intraocular, Phacoemulsification, Postoperative Complications, Vision Disorders surgery
- Published
- 2014
- Full Text
- View/download PDF
240. Thoracic type Ia endoleak: direct percutaneous coil embolization of the aortic arch at the blood entry site after TEVAR and double-chimney stent-grafts.
- Author
-
Bangard C, Franke M, Pfister R, Deppe AC, Matoussevitch V, Maintz D, and Chang DH
- Subjects
- Aneurysm, False etiology, Aneurysm, False therapy, Aorta, Thoracic diagnostic imaging, Blood Vessel Prosthesis Implantation methods, Endoleak etiology, Humans, Male, Marfan Syndrome complications, Middle Aged, Tomography, X-Ray Computed, Aorta, Thoracic surgery, Blood Vessel Prosthesis adverse effects, Blood Vessel Prosthesis Implantation adverse effects, Embolization, Therapeutic methods, Endoleak therapy, Stents
- Abstract
Objectives: To introduce a novel percutaneous technique to stop blood entry at the lesser aortic arch curvature by coil embolisation in type Ia endoleak after TEVAR., Methods: A 61-year-old Marfan patient presented with type Ia endoleak of the aortic arch and a growing aortic arch pseudoaneurysm after TEVAR. Multiple preceding operations and interventions made an endovascular approach unsuccessful. Direct percutaneous puncture of the aneurysmal sac would have cured the sign, but not the cause of blood entry at the lesser curvature of the aortic arch. Direct CT-guided percutaneous puncture of the blood entry site in the aortic arch with fluoroscopically guided coil embolisation using detachable extra-long coils was successfully performed., Results: Three weeks after the intervention, the patient developed fever because of superinfection of the pseudoaneurysm. The blood cultures and CT-guided mediastinal aspirate were sterile. After intravenous administration of antibiotics, the fever disappeared and the patient recovered. Six-month follow-up showed permanent closure of the endoleak and a shrinking aneurysmal sac., Conclusions: Direct percutaneous puncture of the aortic arch at the blood entry site of a thoracic type Ia endoleak after TEVAR and double-chimney stent-grafts with coil embolisation of the wedge-shaped space between the lesser aortic curvature and the stent-graft is possible., Key Points: Endoleaks after thoracic endovascular aortic repair are common in 15-30 %. Most endoleaks can be treated by endovascular means. Direct percutaneous endoleak repair is described as a bail-out option. Direct percutaneous aortic arch coil embolisation of type 1a endoleak is possible. Antibiotic prophylaxis should be administered case by case, considering individual risk factors.
- Published
- 2014
- Full Text
- View/download PDF
241. Bacillus solimangrovi sp. nov., isolated from mangrove soil.
- Author
-
Lee GH, Rhee MS, Chang DH, Kwon KK, Bae KS, Yang SH, and Kim BC
- Subjects
- Bacillus genetics, Bacillus isolation & purification, Bacterial Typing Techniques, Base Composition, Chaperonin 60 genetics, DNA, Bacterial genetics, Diaminopimelic Acid chemistry, Fatty Acids chemistry, Genes, Bacterial, Micronesia, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan chemistry, RNA, Ribosomal, 16S genetics, Sequence Analysis, DNA, Vitamin K 2 analogs & derivatives, Vitamin K 2 chemistry, Avicennia microbiology, Bacillus classification, Phylogeny, Soil Microbiology
- Abstract
Two novel bacterial strains, GH2-4T and GH2-5, were isolated from mangrove soil near the seashore of Weno island in Chuuk state, Micronesia, and were characterized by a polyphasic approach. The two strains were strictly aerobic, Gram-staining-positive, motile, endospore-forming rods that were catalase- and oxidase-positive. Colonies were circular, convex, stringy and transparent yellowish (GH2-4T) or opaque whitish (GH2-5). The 16S rRNA gene sequences of the two isolates were identical. The most closely related strains in terms of 16S rRNA gene sequence similarity were Bacillus kochii WCC 4582T, B. horneckiae DSM 23495T, B. azotoformans LMG 9581T, B. cohnii DSM 6307T and B. halmapalus DSM 8723T (95.6, 95.4, 95.4, 95.2 and 95.2% similarity, respectively). The partial groEL sequence of strain GH2-4T was identical to that of strain GH2-5 and showed <85% similarity to those of the most closely related strains. The isolates grew at pH 5-12 (optimal growth at pH 9), at 10-40 °C (optimum 30-35 °C) and at 0-9% (w/v) NaCl (optimum 1-3% NaCl). The cell-wall peptidoglycan of strains GH2-4T and GH2-5 contained meso-diaminopimelic acid and cell-wall hydrolysates contained ribose as a major sugar. The DNA G+C content was 36 mol%, and DNA-DNA relatedness between the isolates and five related reference strains was 20-24%. Strain GH2-4T exhibited 81% DNA-DNA relatedness with strain GH2-5. The major cellular fatty acids of both strains were iso-C15:0, iso-C16:0, iso-C14:0 and anteiso-C15:0 and the predominant menaquinone was MK-7. On the basis of the evidence from this polyphasic study, strains GH2-4T and GH2-5 (=KCTC 33143=JCM 18995=DSM 27084) represent a novel species of the genus Bacillus, for which the name Bacillus solimangrovi sp. nov. is proposed; the type strain is GH2-4T (=KCTC 33142T=JCM 18994T=DSM 27083T).
- Published
- 2014
- Full Text
- View/download PDF
242. Use of blood-based biomarkers for early diagnosis and surveillance of colorectal cancer.
- Author
-
Ganepola GA, Nizin J, Rutledge JR, and Chang DH
- Abstract
Early screening for colorectal cancer (CRC) holds the key to combat and control the increasing global burden of CRC morbidity and mortality. However, the current available screening modalities are severely inadequate because of their high cost and cumbersome preparatory procedures that ultimately lead to a low participation rate. People simply do not like to have colonoscopies. It would be ideal, therefore, to develop an alternative modality based on blood biomarkers as the first line screening test. This will allow for the differentiation of the general population from high risk individuals. Colonoscopy would then become the secondary test, to further screen the high risk segment of the population. This will encourage participation and therefore help to reach the goal of early detection and thereby reduce the anticipated increasing global CRC incidence rate. A blood-based screening test is an appealing alternative as it is non-invasive and poses minimal risk to patients. It is easy to perform, can be repeated at shorter intervals, and therefore would likely lead to a much higher participation rate. This review surveys various blood-based test strategies currently under investigation, discusses the potency of what is available, and assesses how new technology may contribute to future test design.
- Published
- 2014
- Full Text
- View/download PDF
243. Operating characteristics of a new ion source for KSTAR neutral beam injection system.
- Author
-
Kim TS, Jeong SH, Chang DH, Lee KW, and In SR
- Abstract
A new positive ion source for the Korea Superconducting Tokamak Advanced Research neutral beam injection (KSTAR NBI-1) system was designed, fabricated, and assembled in 2011. The characteristics of the arc discharge and beam extraction were investigated using hydrogen and helium gas to find the optimum operating parameters of the arc power, filament voltage, gas pressure, extracting voltage, accelerating voltage, and decelerating voltage at the neutral beam test stand at the Korea Atomic Energy Research Institute in 2012. Based on the optimum operating condition, the new ion source was then conditioned, and performance tests were primarily finished. The accelerator system with enlarged apertures can extract a maximum 65 A ion beam with a beam energy of 100 keV. The arc efficiency and optimum beam perveance, at which the beam divergence is at a minimum, are estimated to be 1.0 A/kW and 2.5 uP, respectively. The beam extraction tests show that the design goal of delivering a 2 MW deuterium neutral beam into the KSTAR Tokamak plasma is achievable.
- Published
- 2014
- Full Text
- View/download PDF
244. Development progresses of radio frequency ion source for neutral beam injector in fusion devices.
- Author
-
Chang DH, Jeong SH, Kim TS, Park M, Lee KW, and In SR
- Abstract
A large-area RF (radio frequency)-driven ion source is being developed in Germany for the heating and current drive of an ITER device. Negative hydrogen ion sources are the major components of neutral beam injection systems in future large-scale fusion experiments such as ITER and DEMO. RF ion sources for the production of positive hydrogen (deuterium) ions have been successfully developed for the neutral beam heating systems at IPP (Max-Planck-Institute for Plasma Physics) in Germany. The first long-pulse ion source has been developed successfully with a magnetic bucket plasma generator including a filament heating structure for the first NBI system of the KSTAR tokamak. There is a development plan for an RF ion source at KAERI to extract the positive ions, which can be applied for the KSTAR NBI system and to extract the negative ions for future fusion devices such as the Fusion Neutron Source and Korea-DEMO. The characteristics of RF-driven plasmas and the uniformity of the plasma parameters in the test-RF ion source were investigated initially using an electrostatic probe.
- Published
- 2014
- Full Text
- View/download PDF
245. Improvement of a plasma uniformity of the 2nd ion source of KSTAR neutral beam injector.
- Author
-
Jeong SH, Kim TS, Lee KW, Chang DH, In SR, and Bae YS
- Abstract
The 2nd ion source of KSTAR (Korea Superconducting Tokamak Advanced Research) NBI (Neutral Beam Injector) had been developed and operated since last year. A calorimetric analysis revealed that the heat load of the back plate of the ion source is relatively higher than that of the 1st ion source of KSTAR NBI. The spatial plasma uniformity of the ion source is not good. Therefore, we intended to identify factors affecting the uniformity of a plasma density and improve it. We estimated the effects of a direction of filament current and a magnetic field configuration of the plasma generator on the plasma uniformity. We also verified that the operation conditions of an ion source could change a uniformity of the plasma density of an ion source.
- Published
- 2014
- Full Text
- View/download PDF
246. Novel blood-based microRNA biomarker panel for early diagnosis of pancreatic cancer.
- Author
-
Ganepola GA, Rutledge JR, Suman P, Yiengpruksawan A, and Chang DH
- Abstract
Aim: To develop a panel of blood-based diagnostic biomarkers consisting of circulating microRNAs for the detection of pancreatic cancer at an early stage., Methods: Blood-based circulating microRNAs were profiled by high throughput screening using microarray analysis, comparing differential expression between early stage pancreatic cancer patients (n = 8) and healthy controls (n = 11). A panel of candidate microRNAs was generated based on the microarray signature profiling, including unsupervised clustering and statistical analysis of differential expression levels, and findings from the published literature. The selected candidate microRNAs were then confirmed using TaqMan real-time quantitative reverse transcription polymerase chain reaction (RT-qPCR) to further narrow down to a three-microRNA diagnostic panel. The three-microRNA diagnostic panel was validated with independent experimental procedures and instrumentation of RT-qPCR at an independent venue with a new cohort of cancer patients (n = 11), healthy controls (n = 11), and a group of high risk controls (n = 11). Receiver operating characteristic curve analysis was performed to assess the diagnostic capability of the three-microRNA panel., Results: In the initial high throughput screening, 1220 known human microRNAs were screened for differential expression in pancreatic cancer patients versus controls. A subset of 42 microRNAs was then generated based on this data analysis and current published literature. Eight microRNAs were selected from the list of 42 targets for confirmation study, and three-microRNAs, miR-642b, miR-885-5p, and miR-22, were confirmed to show consistent expression between microarray and RT-qPCR. These three microRNAs were then validated and evaluated as a diagnostic panel with a new cohort of patients and controls and found to yield high sensitivity (91%) and specificity (91%) with an area under the curve of 0.97 (P < 0.001). Compared to the CA19-9 marker at 73%, the three-microRNA panel has higher sensitivity although CA19-9 has higher specificity of 100%., Conclusion: The identified panel of three microRNA biomarkers can potentially be used as a diagnostic tool for early stage pancreatic cancer.
- Published
- 2014
- Full Text
- View/download PDF
247. Immunosuppression following heart transplantation: prospects and challenges.
- Author
-
Chang DH, Kittleson MM, and Kobashigawa JA
- Subjects
- Animals, Calcineurin Inhibitors, Graft Rejection etiology, Heart-Assist Devices statistics & numerical data, Humans, Immunization, Antimetabolites therapeutic use, Graft Rejection prevention & control, Growth Inhibitors therapeutic use, Heart Transplantation, Immunosuppression Therapy methods, Immunosuppression Therapy trends
- Abstract
Immunosuppression after heart transplantation has significantly reduced the incidence of cellular rejection and improved patient outcomes with the routine use of calcineurin inhibitors. Antimetabolites and proliferation signal inhibitors add to the improvement in patient outcomes, particularly with respect to the reduced burden of cardiac allograft vasculopathy. Patients with antibody sensitization are potentially at higher risk of postoperative complications. Sensitized patients are undergoing heart transplantation with increased frequency, in part due to the emergence of ventricular assist device use as a bridge to heart transplantation. Despite improvements in immunosuppressive therapies, many challenges face physicians and patients, which will further refine and improve care of the post-heart transplant patient.
- Published
- 2014
- Full Text
- View/download PDF
248. Sunxiuqinia dokdonensis sp. nov., isolated from deep sub-seafloor sediment.
- Author
-
Chang DH, Lee JB, Lee GH, Rhee MS, Lee H, Bae KS, Park DS, and Kim BC
- Subjects
- Bacteroidetes classification, Bacteroidetes genetics, Bacteroidetes metabolism, Base Composition, DNA, Bacterial genetics, Fatty Acids metabolism, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S genetics, Bacteroidetes isolation & purification, Geologic Sediments microbiology, Seawater microbiology
- Abstract
A novel facultatively anaerobic strain DH1(T) was isolated from deep sub-seafloor sediment at a depth of 900 m below the seafloor off Seo-do (the west part of Dokdo Island) in the East Sea of the Republic of Korea. The new strain was characterized using polyphasic approaches. The isolate was Gram-stain-negative, motile by gliding, non-spore-forming rods, oxidase-negative, and catalase-positive; and formed colonies of orange-red color. The NaCl range for growth was 0.5-7.0% (w/v) and no growth was observed in the absence of NaCl. The isolate grew optimally at 30°C, with 2% (w/v) NaCl and at pH 7. The cell-wall hydrolysates contained ribose as a major sugar. The DNA G+C content was 40.8 mol%. The closest related strains are Sunxiuqinia faeciviva JAM-BA0302(T) and Sunxiuqinia elliptica DQHS-4(T) (97.9 and 96.3% sequence similarity, respectively). The level of DNA-DNA relatedness between strain DH1(T) and S. faeciviva JAM-BA0302(T) was around 41% (but only 6% between DH1T and S. elliptica DQHS-4(T)). The major cellular fatty acids of the isolate were contained iso-C15:0 (25.9%), anteiso-C15:0 (16.7%), and summed feature 9 (comprising C16:0 3-OH and/or unknown fatty acid of dimethylacetal ECL 17.157; 13.2%). The predominant menaquinone was MK-7. On the basis of polyphasic evidence from this study, the isolate was considered to represent a novel species of the genus Sunxiuqinia, for which the name Sunxiuqinia dokdonensis sp. nov. is proposed; the type strain is DH1(T) (=KCTC 32503(T) =CGMCC 1.12676(T) =JCM 19380(T)).
- Published
- 2013
- Full Text
- View/download PDF
249. Methanobrevibacter boviskoreani sp. nov., isolated from the rumen of Korean native cattle.
- Author
-
Lee JH, Kumar S, Lee GH, Chang DH, Rhee MS, Yoon MH, and Kim BC
- Subjects
- Animals, Bacterial Typing Techniques, Base Composition, Cell Wall chemistry, Methanobrevibacter genetics, Methanobrevibacter isolation & purification, Molecular Sequence Data, Nucleic Acid Hybridization, Oxidoreductases genetics, RNA, Ribosomal, 16S genetics, Republic of Korea, Sequence Analysis, DNA, Cattle microbiology, Methanobrevibacter classification, Phylogeny, Rumen microbiology
- Abstract
Three strictly anaerobic, methanogenic strains JH1(T), JH4 and JH8 were isolated from rumen of the Korean native cattle (HanWoo; Bos taurus coreanae) in South Korea. The colonies were circular, opaque, and slightly yellowish. Phylogenetic analyses of 16S rRNA gene and mcrA (encoding α subunit of methyl-coenzyme M reductase) sequences confirmed the affiliation of the novel strains with the Methanobacteriales, and Methanobrevibacter wolinii SH(T) was the most closely related species. The 16S rRNA gene and mcrA sequence similarities between strains JH1(T), JH4 and JH8 and M. wolinii SH(T) were 96.2 and 89.0 % respectively, and DNA-DNA hybridization of the isolates and M. wolinii DSM 11976(T) showed a 20 % reassociation. Strain JH1(T) exhibited 92 % DNA-DNA relatedness with strains JH4 and JH8, and their 16S rRNA gene and mcrA sequences were identical. Cells stained Gram-positive and were non-motile rods, 1.5-1.8 µm long and 0.6 µm wide. The strains were able to use H2/CO2 and formate. The optimum temperature and pH ranges for growth were 37-40 °C and pH 6.5-7.0. The DNA G+C content of strain JH1(T) was 28 mol%. Based on data from this study using a polyphasic approach, the three strains represent a novel species of genus Methanobrevibacter, for which the name Methanobrevibacter boviskoreani sp. nov. is proposed. The type strain is JH1(T) ( = KCTC 4102(T) = JCM 18376(T)).
- Published
- 2013
- Full Text
- View/download PDF
250. [Surface-enhanced raman spectroscopy study of vitamin B12 on copper electrode].
- Author
-
Wang B, Chang DH, Lu G, Wang TH, Zhang ZL, and Mo YJ
- Subjects
- Adsorption, Copper, Electrodes, Oxidation-Reduction, Surface Properties, Spectrum Analysis, Raman, Vitamin B 12 analysis
- Abstract
The vitamin B12 molecule has long fascinated chemists because of its exclusive complex structure and unusual reactivities in biological systems. In order to achieve a better understanding of the structural attribute of the Vitamin B12 molecule when it interacted with metal, in the present paper, the vitamin B12 molecules adsorbed on variation of copper electrode potential from 0 to -1.0 V was studied by surface-enhanced Raman spectroscopy (SERS). An excellent SERS substrate was obtained with insitu electrochemical oxidation-reduction cycle (ORC), and its surface roughness was characterized by atomic force microscope (AFM). Assignments of Raman peaks observed by normal Raman spectrum (NRS) and SERS spectra of vitamin B12 molecule were given based on previous literatures. It was found that the potential-dependent relative intensity changed in SERS spectra which depended on the vitamin B12 molecular orientation with respect to the copper surface according to the surface selection rule (SSR). It was concluded that the corrin ring was adsorbed in tilt form on copper surface and the Co-CN group was farther away from the copper surface at higher potentials. With the decrease in potential, the tilt angle between the corrin ring and copper surface became smaller, then the Co-N group and 5,6 dimethylbenzimidazole group got close to the copper surface. The results offered an important structural attribute of vitamin B12 molecule when it interacted with copper electrode for the first time, and supplied a meaningful reference for the electrochemical bioactivity of the vitamin B12 molecule.
- Published
- 2013
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.