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Dermabacter vaginalis sp. nov., isolated from human vaginal fluid.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2016 Apr; Vol. 66 (4), pp. 1881-1886. Date of Electronic Publication: 2016 Feb 10. - Publication Year :
- 2016
-
Abstract
- A novel actinobacterial strain, AD1-86T, was isolated from the vaginal fluid of a Korean female and was characterized by a polyphasic approach. The strain was a facultatively anaerobic, Gram-stain-positive, non-spore-forming, non-motile, catalase-positive and oxidase-negative short rod. Colonies were creamy white, of low convexity and 1-2 mm in diameter after growth on DSM 92 agar plates at 37 °C for 2 days. The most closely related strains were Dermabacter hominis DSM 7083T and Helcobacillus massiliensis 6401990T (98.3 and 96.3 % 16S rRNA gene sequence similarity, respectively). The isolate grew optimally at 37 °C and pH 7 in the presence of 0.5% (w/v) NaCl. The cell-wall peptidoglycan contained meso-diaminopimelic acid and the cell-wall hydrolysates contained ribose, galactose and glucose. The DNA G+C content was 62.6 mol% and the mean DNA-DNA relatedness value of the isolate to D. hominis DSM 7083T was 31.1±3.0% (reciprocal: 48.2±5.3%). The major cellular fatty acids (>10%) were anteiso-C17:0, anteiso-C15:0 and iso-C16:0, and the menaquinones were MK-9, MK-8 and MK-7. The polar lipid profile of strain AD1-86T consisted of diphosphatidylglycerol, phosphatidylglycerol, two aminolipids and a glycolipid. Data from this polyphasic study indicate that strain AD1-86T represents a novel species of the genus Dermabacter, for which the name Dermabacter vaginalis sp. nov. is proposed; the type strain is AD1-86T (=KCTC 39585T=DSM 100050T).
- Subjects :
- Actinomycetales genetics
Actinomycetales isolation & purification
Asian People
Bacterial Typing Techniques
Base Composition
DNA, Bacterial genetics
Diaminopimelic Acid chemistry
Fatty Acids chemistry
Female
Glycolipids chemistry
Humans
Molecular Sequence Data
Nucleic Acid Hybridization
Peptidoglycan chemistry
Phospholipids chemistry
RNA, Ribosomal, 16S genetics
Republic of Korea
Sequence Analysis, DNA
Vitamin K 2 chemistry
Actinomycetales classification
Phylogeny
Vagina microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 66
- Issue :
- 4
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 26867728
- Full Text :
- https://doi.org/10.1099/ijsem.0.000960