1,236 results on '"Siika, A"'
Search Results
152. The Worldwide End-of-Life Practice for Patients in Intensive Care Units Study: Adding Africa
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Beesley, Sarah J., Siika, Wangari, Nyale, George, Kituyi, Protus, and Kussin, Peter
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- 2015
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153. Liquid chromatography combined with mass spectrometry for the investigation of endoglucanase selectivity on carboxymethyl cellulose
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Enebro, Jonas, Momcilovic, Dane, Siika-aho, Matti, and Karlsson, Sigbritt
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- 2009
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154. Dolutegravir or Darunavir in Combination with Zidovudine or Tenofovir to Treat HIV
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Henry Mugerwa, Abraham Siika, Agnes Kiragga, Anne Hoppe, Arvind Kaimal, Grace Mirembe, Jesca Asienzo, Stephen Walimbwa, Nadia Trial Team, James Hakim, Andrew Kambugu, Apolo Balyegisawa, Cissy Kityo, Joseph Musaazi, Nicholas I. Paton, Gilbert Ategeka, Barbara Castelnuovo, and Phionah Tukamushabe
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Adult ,Male ,Tenofovir ,Adolescent ,Anti-HIV Agents ,Pyridones ,Human immunodeficiency virus (HIV) ,Drug Resistance ,HIV Infections ,medicine.disease_cause ,World health ,Piperazines ,chemistry.chemical_compound ,Zidovudine ,Young Adult ,Oxazines ,medicine ,Humans ,Child ,Darunavir ,business.industry ,General Medicine ,Middle Aged ,Viral Load ,Virology ,chemistry ,Dolutegravir ,HIV-1 ,Reverse Transcriptase Inhibitors ,Drug Therapy, Combination ,Female ,business ,Viral load ,Heterocyclic Compounds, 3-Ring ,medicine.drug - Abstract
The World Health Organization recommends dolutegravir with two nucleoside reverse-transcriptase inhibitors (NRTIs) for second-line treatment of human immunodeficiency virus type 1 (HIV-1) infection. Evidence is limited for the efficacy of this regimen when NRTIs are predicted to lack activity because of drug resistance, as well as for the recommended switch of an NRTI from tenofovir to zidovudine.In a two-by-two factorial, open-label, noninferiority trial, we randomly assigned patients for whom first-line therapy was failing (HIV-1 viral load, ≥1000 copies per milliliter) to receive dolutegravir or ritonavir-boosted darunavir and to receive tenofovir or zidovudine; all patients received lamivudine. The primary outcome was a week 48 viral load of less than 400 copies per milliliter, assessed with the Food and Drug Administration snapshot algorithm (noninferiority margin for the between-group difference in the percentage of patients with the primary outcome, 12 percentage points).We enrolled 464 patients at seven sub-Saharan African sites. A week 48 viral load of less than 400 copies per milliliter was observed in 90.2% of the patients in the dolutegravir group (212 of 235) and in 91.7% of those in the darunavir group (210 of 229) (difference, -1.5 percentage points; 95% confidence interval [CI], -6.7 to 3.7; P = 0.58; indicating noninferiority of dolutegravir, without superiority) and in 92.3% of the patients in the tenofovir group (215 of 233) and in 89.6% of those in the zidovudine group (207 of 231) (difference, 2.7 percentage points; 95% CI, -2.6 to 7.9; P = 0.32; indicating noninferiority of tenofovir, without superiority). In the subgroup of patients with no NRTIs that were predicted to have activity, a viral load of less than 400 copies per milliliter was observed in more than 90% of the patients in the dolutegravir group and the darunavir group. The incidence of adverse events did not differ substantially between the groups in either factorial comparison.Dolutegravir in combination with NRTIs was effective in treating patients with HIV-1 infection, including those with extensive NRTI resistance in whom no NRTIs were predicted to have activity. Tenofovir was noninferior to zidovudine as second-line therapy. (Funded by Janssen; NADIA ClinicalTrials.gov number, NCT03988452.).
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- 2021
155. Downin oireyhtymä ja tukiviittomat kielenkehityksen tukena varhaiskasvatuksessa
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Siika-aho, E. (Ella)
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Tiivistelmä. Kandidaatin tutkielmani tavoitteena on selvittää, miten tukiviittomat tukevat lapsen kielenkehitystä varhaiskasvatuksessa. Tutkielma on rajattu koskemaan lapsia, joilla on Downin oireyhtymä. Varhaiskasvatuksella tarkoitetaan päiväkodissa tapahtuvaa tavoitteellista toimintaa, johon sisältyy hoito, opetus ja kasvatus. Tutkielmassa tutkitaan varhaiskasvatusikäisen lapsen, jolla on Downin oireyhtymä, kielenkehitystä. Varhaiskasvatusikäisillä lapsilla tarkoitetaan alle kouluikäisiä lapsia. Tutkielma toteutetaan kirjallisuuskatsauksena ja aineistoa on kerätty laajasti eri tieteenaloilta, kuten logopedian, varhaiskasvatuksen, erityiskasvatuksen ja lääketieteen alojen julkaisuista. Tutkielma toteutetaan narratiivisena kirjallisuuskatsauksena, jossa vastausta tutkimuskysymykseen etsitään jo olemassa olevasta tutkimuskirjallisuudesta ja tieteellisistä artikkeleista. Kirjallisuuskatsauksen tarkoituksena on luoda kattava yleiskuva tutkittavasta aiheesta, jossa tavoitteena on kuvata tutkittava aihe mahdollisimman laajasti. Tarvittaessa kirjallisuuskatsauksessa voidaan myös eritellä tutkittavan aiheen ilmiöitä sekä huomioida mahdolliset epäkohdat. Narratiivisen kirjallisuuskatsauksen tarkoituksena on tiivistää laaja aihekokonaisuus helppolukuiseksi ja tiiviiksi kokonaisuudeksi. Narratiivinen kirjallisuuskatsaus nähdään kirjallisuuskatsauksen eri muodoista kevyimpänä ja se auttaa ajantasaistamaan tutkimustietoa. Tutkielmassa esitellään puhetta tukevia ja korvaavia kommunikointimenetelmiä (AAC-menetelmät), joista tarkemmin syvennytään tukiviittomiin. Tukiviittomat ovat viittomakielen viittomia ja niitä käytetään aina rinnakkain puheen kanssa, viittoen vain lauseen ymmärtämisen kannalta tärkein sana. Tukiviittomia käytetään erityisesti lasten, joilla on kielenkehityksen häiriöitä sekä lasten, joilla on autismikirjon häiriöitä tai Downin oireyhtymä. Tukiviittomien merkitystä tarkastellaan spesifisti lapsen, jolla on Downin oireyhtymä, kielen kehittymisen kannalta. Useat tutkimukset osoittavat tukiviittomien käyttämisen myönteisen vaikutuksen puheenkehitykseen. Erityisesti niiden lasten, joilla on Downin oireyhtymä, puheyritykset lisääntyivät tukiviittomien käyttöönoton myötä. Tukiviittoman mallihenkilö hidastaa puhetta viittoessa, jolloin myös puheen ymmärtäminen helpottuu. Kommunikoinnin helpottumisen myötä myös sosiaaliset paineet, stressi, turhautumisen ja aggressiivisuuden tunteet väistyvät ja lapselle avautuu yhdenvertainen dialogi keskustelukumppanin kanssa. Tukiviittomat ovat usein avun tuoma keino lapsille, joilla on Downin oireyhtymä. Downin oireyhtymässä havaitaan lievää tai keskivaikeaa kehitysvammaa. Tyypillisiä puheeseen vaikuttavia piirteitä ovat muun muassa suun ja nielun tavallista pienempi koko ja kielen velttous, jotka vaikuttavat artikulaatioon ja puheeseen. Lapsilla, joilla on Downin oireyhtymä, on havaittu enemmän haasteita puheen tuottamisessa ja sen lisäksi 60 prosentilla heistä todetaan lapsuusiässä kuulovamma, joka lievänäkin vaikeuttaa kielellistä kommunikaatiota.
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- 2021
156. “These are Good Problems to Have…”: Establishing a Collaborative Research Partnership in East Africa
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Tierney, William M., Nyandiko, Winstone N., Siika, Abraham M., Wools-Kaloustian, Kara, Sidle, John E., Kiplagat, Jepchirchir, Bell, April, and Inui, Thomas S.
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- 2013
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157. Small-angle scattering study of structural changes in the microfibril network of nanocellulose during enzymatic hydrolysis
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Penttilä, Paavo A., Várnai, Anikó, Fernández, Manuel, Kontro, Inkeri, Liljeström, Ville, Lindner, Peter, Siika-aho, Matti, Viikari, Liisa, and Serimaa, Ritva
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- 2013
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158. Abdominal Aortic Aneurysm Rupture Risk Assessment Using Machine Learning to Integrate Biomechanical, Geometrical, and Patient Characteristics
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Marta Alloisio, Joy Roy, Antti Siika, Moritz Lindquist Liljeqvist, and T. Christian Gasser
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Surgery ,Cardiology and Cardiovascular Medicine - Published
- 2022
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159. Geometric and biomechanical modeling aided by machine learning improves the prediction of growth and rupture of small abdominal aortic aneurysms
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Lindquist Liljeqvist, Moritz, primary, Bogdanovic, Marko, additional, Siika, Antti, additional, Gasser, T. Christian, additional, Hultgren, Rebecka, additional, and Roy, Joy, additional
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- 2021
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160. Location of cellulose and callose in pollen tubes and grains of Nicotiana tabacum
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Ferguson, C., Teeri, T.T., Siika-aho, M., Read, S.M., and Bacic, A.
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- 1998
161. Implementing enhanced patient care to promote patient engagement in HIV care in a rural setting in Kenya
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Becky L. Genberg, Ann Mwangi, Omar Galárraga, Ira B. Wilson, Siika Abraham, Juddy Wachira, and Diana Chemutai
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Rural Population ,Patient engagement ,Qualitative property ,Context (language use) ,HIV Infections ,Health informatics ,Health administration ,03 medical and health sciences ,0302 clinical medicine ,Health facility ,Nursing ,Intervention (counseling) ,Health care ,Medicine ,Humans ,030212 general & internal medicine ,Adaptation ,Qualitative Research ,business.industry ,030503 health policy & services ,Health Policy ,Nursing research ,Kenya ,Implementation ,Patient Care ,Public aspects of medicine ,RA1-1270 ,HIV care ,Patient Participation ,0305 other medical science ,business ,Research Article - Abstract
Background Patient engagement is effective in promoting adherence to HIV care. In an effort to promote patient-centered care, we implemented an enhanced patient care (EPC) intervention that addresses a combination of system-level barriers including provider training, continuity of clinician-patient relationship, enhanced treatment dialogue and better clinic scheduling. We describe the initial implementation of the EPC intervention in a rural HIV clinic in Kenya, and the factors that facilitated its implementation. Methods The intervention occurred in one of the rural Academic Model Providing Healthcare (AMPATHplus) health facilities in Busia County in the western region of Kenya. Both qualitative and quantitative data were collected through training and meeting proceedings/minutes, a patient tracking tool, treatment dialogue and a peer confirmation tool. Qualitative data were coded and emerging themes on the implementation and adaptation of the intervention were developed. Descriptive analysis including percentages and means were performed on the quantitative data. Results Our analysis identified four key factors that facilitated the implementation of this intervention. (1) The smooth integration of the intervention as part of care that was facilitated by provider training, biweekly meetings between the research and clinical team and having an intervention that promotes the health facility agenda. (2) Commitment of stakeholders including providers and patients to the intervention. (3) The adaptability of the intervention to the existing context while still maintaining fidelity to the intervention. (4) Embedding the intervention in a facility with adequate infrastructure to support its implementation. Conclusions This analysis demonstrates the value of using mixed methods approaches to study the implementation of an intervention. Our findings emphasize how critical local support, local infrastructure, and effective communication are to adapting a new intervention in a clinical care program.
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- 2021
162. A clinician-nurse model to reduce early mortality and increase clinic retention among high-risk HIV-infected patients initiating combination antiretroviral treatment
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Braitstein, Paula, Siika, Abraham, Hogan, Joseph, Kosgei, Rose, Sang, Edwin, Sidle, John, Wools?Kaloustian, Kara, Keter, Alfred, Mamlin, Joseph, and Kimaiyo, Sylvester
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Antiviral agents -- Dosage and administration -- Patient outcomes ,Nursing care -- Influence ,HIV patients -- Drug therapy ,Health - Abstract
Background: In resource‐poor settings, mortality is at its highest during the first 3 months after combination antiretroviral treatment (cART) initiation. A clear predictor of mortality during this period is having a low CD4 count at the time of treatment initiation. The objective of this study was to evaluate the effect on survival and clinic retention of a nurse‐based rapid assessment clinic for high‐risk individuals initiating cART in a resource‐constrained setting. Methods: The USAID‐AMPATH Partnership has enrolled more than 140,000 patients at 25 clinics throughout western Kenya. High Risk Express Care (HREC) provides weekly or bi‐weekly rapid contacts with nurses for individuals initiating cART with CD4 counts of ≤100 cells/mm[sup.3]. All HIV‐infected individuals aged 14 years or older initiating cART with CD4 counts of ≤100 cells/mm[sup.3] were eligible for enrolment into HREC and for analysis. Adjusted hazard ratios (AHRs) control for potential confounding using propensity score methods. Results: Between March 2007 and March 2009, 4,958 patients initiated cART with CD4 counts of ≤100 cells/mm[sup.3]. After adjusting for age, sex, CD4 count, use of cotrimoxazole, treatment for tuberculosis, travel time to clinic and type of clinic, individuals in HREC had reduced mortality (AHR: 0.59; 95% confidence interval: 0.45‐0.77), and reduced loss to follow up (AHR: 0.62; 95% CI: 0.55‐0.70) compared with individuals in routine care. Overall, patients in HREC were much more likely to be alive and in care after a median of nearly 11 months of follow up (AHR: 0.62; 95% CI: 0.57‐0.67). Conclusions: Frequent monitoring by dedicated nurses in the early months of cART can significantly reduce mortality and loss to follow up among high‐risk patients initiating treatment in resource‐constrained settings., Background Combination antiretroviral treatment (cART) has proven itself to be an effective therapeutic mechanism for suppressing viral replication and enabling reconstitution of the immune system, thus allowing patients to recover [...]
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- 2012
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163. Susceptibility of pretreated wood sections of Norway spruce (Picea abies) clones to enzymatic hydrolysis
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Rodriguez, Yohama Puentes, Puhakka-Tarvainen, Helena, Pastinen, Ossi, Siika-aho, Matti, Alvila, Leila, Turunen, Ossi, Morales, Luis, and Pappinen, Ari
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Spruce -- Physiological aspects -- Health aspects ,Biodegradation -- Health aspects ,Hydrolysis -- Health aspects ,Earth sciences - Abstract
The structure of softwoods, which confers resistance to degradation through hydrolysis and decay, currently limits their use for the production of biofuels. However, since wood is very heterogeneous, it is possible that differences in wood properties within and between trees could differentially affect its process ability. In this research, heartwood (inner) and sapwood (outer) from Norway spruce (Picea abies (L.) Karst.) clones were enzymatically hydrolyzed by Trichoderma viride cellulases after concentrated acid pretreatment. Wood sections with two particle sizes were compared based on their susceptibility to enzymatic hydrolysis, evaluated by assaying the formation of hydrolysis products and measured as reducing sugar yield (RSY). We also studied the relationship between RSY and the susceptibility to Heterobasidion parviporum wood decay and whether these traits are reflected in wood density and yield. Wood from the outer section produced more RSY with higher glucan but lower lignin content than wood from the inner section. Furthermore, susceptibility to enzymatic hydrolysis was positively correlated with H. parviporum wood decay, while both processes were negatively correlated with wood density. Our results revealed the importance of clonal trials for identifying suitable lignocellulosic biomass when considering wood properties and indicate that potential genotypes for the production of biofuels are not necessarily the most productive. Resume: La structure du bois des resineux qui leur confere une resistance a la degradation par hydrolyse et par la carie limite presentement leur utilisation pour la production de biocarburants. Cependant, etant donne que le bois est tres heterogne, il est possible que les differences de proprietes du bois a l'interieur du meme arbre ou entre differents arbres puissent avoir des effets differents sur sa transformabilite. Dans cette recherche, du bois de coeur (interne) et du bois d'aubier (externe) de clones d'epicea commun (Picea abies (L.) Karst.) ont ete hydrolyses enzymatiquement a l'aide de cellulases de Trichoderma viride apres un pretraitement avec un acide concentre. Les sections de bois avec deux dimensions de particules ont ete comparees sur la base de leur susceptibilite a l'hydrolyse enzymatique qui a ete evaluee en dosant la formation des produits de l'hydrolyse et mesuree sous forme de rendement en sucres reducteurs (RSR). Nous avons egalement etudie la relation entre le RSR et la susceptibilite a la carie du bois causee par Heterobasidion parviporum et verifie si ces caracteristiques sont refletees dans le rendement et la densite du bois. Le bois d'aubier a eu un meilleur RSR, avec une teneur en glucane plus elevee mais une teneur en lignine plus faible que le bois de coeur. De plus, la susceptibilite a l'hydrolyse enzymatique etait positivement correlee avec la carie du bois causee par H. parviporum tandis que les deux processus etaient negativement correles avec la densite du bois. Nos resultats ont fait ressortir l'importance des tests clonaux pour identifier la biomasse lignocellulosique convenable lorsqu'on considere les proprietes du bois et montrent que les genotypes potentiels pour la production de biocarburants ne sont pas necessairement les plus productifs. [Traduit par la Redaction], Introduction Combating climate change through renewable energy and ensuring energy security are major drivers of the increasing utilization of lignocellulosic biomass for the production of second-generation transport fuels. In general, [...]
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- 2012
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164. Hydrolysis of amorphous and crystalline cellulose by heterologously produced cellulases of Melanocarpus albomyces
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Szijártó, Nóra, Siika-aho, Matti, Tenkanen, Maija, Alapuranen, Marika, Vehmaanperä, Jari, Réczey, Kati, and Viikari, Liisa
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- 2008
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165. Evaluation of the role of xyloglucanase in the enzymatic hydrolysis of lignocellulosic substrates
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Benkő, Zsuzsa, Siika-aho, Matti, Viikari, Liisa, and Réczey, Kati
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- 2008
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166. Characterisation of Specific Activities and Hydrolytic Properties of Cell-Wall-Degrading Enzymes Produced by Trichoderma reesei Rut C30 on Different Carbon Sources
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Sipos, Bálint, Benkő, Zsuzsa, Dienes, Dóra, Réczey, Kati, Viikari, Liisa, and Siika-aho, Matti
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- 2010
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167. Antiretroviral therapies in women after single-dose nevirapine exposure
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Lockman, S., McIntyre, Hughes J., Zheng, Y., Chipato, T., Conradie, F., Sawe, F., Asmelash, A., Hosseinipour, M.C., Mohapi, L., Stringer, E., Mngqibisa, R., Siika, A., Atwine, D., Hakim, J., Shaffer, D., Kanyama, C., Wools-Kaloustian, K., Salata, R.A., Hogg, E., Alston-Smith, B., Walawander, A., Purcelle-Smith, E., Eshelman, S., Rooney, J., Rahim, S., Mellors, J.W., Schooley, R.T., Currier, Jurcelle-Smith, E., and Currier, J
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HIV seropositivity -- Drug therapy ,Nevirapine -- Usage ,Nevirapine -- Health aspects ,Tenofovir -- Usage ,Tenofovir -- Health aspects ,Drug therapy, Combination - Abstract
A study was conducted to evaluate the efficacy of different antiretroviral therapies in women who were given peripartum single-dose nevirapine. Results indicated that in the case of women with such peripartum exposure, ritonavir-boosted lopinavir plus tenofovir-emtricitabine was found to be far superior as a form of initial antiretroviral therapy.
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- 2010
168. Influence of gender on loss to follow-up in a large HIV treatment programme in western Kenya/Influence du sexe de la personne sur la perte du suivi dans un vaste programme de traitement du VIH dans l'ouest du Kenya/Influencia del genero en las bajas en el seguimiento de un amplio programa terapeutico contra el VIH en el oeste de Kenya
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Ochieng-Ooko, Vincent, Ochieng, Daniel, Sidle, John E., Holdsworth, Margaret, Wools-Kaloustian, Kara, Siika, Abraham M., Yiannoutsos, Constantin T., Owiti, Michael, Kimaiyoc, Sylvester, and Braitstein, Paula
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Influence ,Care and treatment ,Research ,Demographic aspects ,HIV infections -- Care and treatment -- Demographic aspects -- Research ,Patient compliance -- Demographic aspects -- Research ,Disease sex factors -- Influence -- Research ,Sex factors in disease -- Influence -- Research ,HIV infection -- Care and treatment -- Demographic aspects -- Research - Abstract
Introduction Approximately 33 million people worldwide are living with human immunodeficiency virus (HIV) infection or acquired immunodeficiency syndrome (AIDS), and the majority are in sub-Saharan Africa. (1) The use of [...], Objective To determine the incidence of loss to follow-up in a treatment programme for people living with human immunodeficiency virus (HIV) infection in Kenya and to investigate how loss to follow-up is affected by gender. Methods Between November 2001 and November 2007, 50 275 HIV-positive individuals aged > 14 years (69% female; median age: 36.2 years) were enrolled in the study. An individual was lost to follow-up when absent from the HIV treatment clinic for > 3 months if on combination antiretroviral therapy (cART) or for > 6 months if not. The incidence of loss to follow-up was calculated using Kaplan-Meier methods anal factors associated with loss to follow-up were identified by logistic and Cox multivariate regression analysis. Findings Overall, 8% of individuals attended no follow-up visits, and 54% of them were lost to follow-up. The overall incidence of loss to follow-up was 25.1 per. 100 person-years. Among the 92% who attended at least one follow-up visit, the incidence of loss to follow-up before and after starting CART was 27.2 and 14.0 per 100 person- years, respectively. Baseline factors associated with loss to follow-up included younger age, a long travel time to the clinic, patient disclosure of positive HIV status, high CD4+ lymphocyte count, advanced-stage HIV disease, and rural clinic location. Men were at an increased risk overall and before and after starting cART. Conclusion The risk of being lost to follow-up was high, particularly before starting cART. Men were more likely to become lost to follow-up, even after adjusting for baseline sociodemographic and clinical characteristics. Interventions designed for men and women separately could improve retention. Objectif Determiner l'incidence de perte de suivi dans un programme de traitement pour les personnes vivant avec l'infection par le virus de l'immunodeficience humaine (VIH) au Kenya, et investiguer comment la perte de suivi est influencee par le sexe. Methodes Entre novembre 2001 et novembre 2007, 50 275 individus seropositifs d'age [is greater than or equal to] 14 ans (69% de sexe feminin; age median: 36,2 ans) ont participe a l'etude. Le suivi a ete perdu lorsque les individus ont ete absents de la clinique de traitement du VIH pendant > 3 mois lorsqu'ils etaient sous combinaison therapeutique antiretrovirale (TARV), et pendant > 6 mois dans le cas contraire. L'incidence de perte du suivi a ete calculee au moyen des methodes Kaplan-Meier, et les facteurs associes a la perte du suivi ont ete identifies par la regression logistique et l'analyse multivariable par regression du modele de Cox. Resultats Globalement, 8% des individus ne se sont jamais presentes a unevisite de suivi, et 54% d'entre eux ont perdu le suivi. L'incidence totale de perte du suivi etait de 25,1 par 100 personnes-annees. Parmi les 92% qui ont assiste a une visite de suivi au moins, l'incidence de perte du suivi avant et apres le debut du TARV a ete de 27,2 et 14,0 par 100 personnes-annees, respectivement. Parmi les facteurs de la ligne de base associes a la perte du suivi, ont ete constates le jeune age, la longueur du temps de trajet pour se rendre a la clinique, la revelation de l'etat VIH positif du patient, un nombre eleve de lymphocytes CD4+, un stade avance de la maladie a VIH et la ruralite de la clinique. Les hommes ont presente un risque plus eleve en general et ce, avant et apres le debut du TARV. Conclusion Le risque de perte du suivi a ete eleve, particulierement avant le debut du TARV. Les hommes ont ete plus enclins a perdre le suivi, meme apres ajustement pour base sociodemographique et caracteristiques cliniques. Des interventions concues separement pour les hommes et les femmes pourraient ameliorer la retention. Objetivo Determinar la incidencia de bajas en el seguimiento de un programa terapeutico de personas portadoras del virus de la inmunodeficiencia humana (VIH) en Kenya, e investigar si el sexo de dichas personas influye en las bajas en el seguimiento. Metodos Entre noviembre de 2001 y noviembre de 2007 se inscribieron en el estudio 50 275 personas VIH-positivas de mas de 14 anos de edad (69% mujeres; edad media: 36,2 anos). Se considero Una baja en el seguimiento cuando la persona se ausento de la clinica de tratamiento del VIH durante mas de tres meses si estaba en tratamiento antirretroviral combinado (TARC) o, en el caso contrario, durante mas de seis meses. La incidencia de bajas en el seguimiento se ha calculado utilizando los metodos de Kaplan-Meier, y los factores asociados con las bajas en el seguimiento se han identificado mediante un analisis de regresion logistica y de regresion multifactorial de Cox. Resultados En terminos generales, el 8% de las personas no acudieron a las visitas de seguimiento, de las que el 54% se consideraron como bajas en el seguimiento. La incidencia total de bajas en el seguimiento fue de 25,1 por 100 anos-persona. Dei 92% que acudio al menos a una visita de seguimiento, la incidencia de baja en el seguimiento, antes y despues de comenzar el TARC fue de 27,2 y 14,0 por 100 anos persona, respectivamente. Los factores iniciales asociados a la baja en el seguimiento incluyeron: la juventud, la lejania de la clinica, la revelacion dei paciente de su estado de VIH-positivo, el recuento linfocitico CD4+ elevado, enfermedades debidas al VIH en fase avanzada y la ubicacion de la clinica rural. El riesgo general en hombres fue elevado, antes y despues de iniciar el TARC. Conclusion El riesgo de baja en el seguimiento dei paciente fue elevado, sobre todo antes de iniciar el TARC. Hubo una tendencia de mas bajas en el seguimiento entre los hombres, aun despues dei ajuste de las caracteristicas sociodemograficas y clinicas iniciales. Las intervenciones especificas e individuales para hombres y mujeres podrian mejorar la permanencia en el programa.
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- 2010
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169. Assessment of Second-Line Antiretroviral Regimens for HIV Therapy in Africa
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Paton, Nicholas I., Kityo, Cissy, Hoppe, Anne, Reid, Andrew, Kambugu, Andrew, Lugemwa, Abbas, van Oosterhout, Joep J., Kiconco, Mary, Siika, Abraham, Mwebaze, Raymond, Abwola, Mary, Abongomera, George, Mweemba, Aggrey, Alima, Hillary, Atwongyeire, Dickens, Nyirenda, Rose, Boles, Justine, Thompson, Jennifer, Tumukunde, Dinah, Chidziva, Ennie, Mambule, Ivan, Arribas, Jose R., Easterbrook, Philippa J., Hakim, James, Walker, Sarah A., and Mugyenyi, Peter
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- 2014
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170. The role of endoglucanase and endoxylanase in liquefaction of hydrothermally pretreated wheat straw
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Skovgaard, Pernille Anastasia, Thygesen, Lisbeth Garbrecht, Jrgensen, Henning, Cardona, Maria, Tozzi, Emilio, McCarthy, Michael, Siika-Aho, Matti, and Jeoh, Tina
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- 2014
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171. Investigation of endoglucanase selectivity on carboxymethyl cellulose by mass spectrometric techniques
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Enebro, Jonas, Momcilovic, Dane, Siika-aho, Matti, and Karlsson, Sigbritt
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- 2009
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172. Effect of wet spinning parameters on the properties of novel cellulosic fibres
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Vehviläinen, Marianna, Kamppuri, Taina, Rom, Monika, Janicki, Jaroslaw, Ciechańska, Danuta, Grönqvist, Stina, Siika-Aho, Matti, Elg Christoffersson, Kristina, and Nousiainen, Pertti
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- 2008
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173. Additional file 1 of Implementing enhanced patient care to promote patient engagement in HIV care in a rural setting in Kenya
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Wachira, Juddy, Genberg, Becky, Chemutai, Diana, Mwangi, Ann, Galarraga, Omar, Abraham, Siika, and Wilson, Ira
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Data_FILES - Abstract
Additional file 1
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- 2021
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174. Limb Graft Occlusion Following Endovascular Aneurysm Repair for Infrarenal Abdominal Aortic Aneurysm with the Zenith Alpha, Excluder, and Endurant Devices : a Multicentre Cohort Study
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Otto Stackelberg, Magnus Jonsson, Antti Siika, Joy Roy, Manne Andersson, Håkan Roos, Marko Bogdanovic, Samuel Ersryd, and David Lindström
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Male ,medicine.medical_specialty ,Time Factors ,medicine.medical_treatment ,Prosthesis Design ,Endovascular aneurysm repair ,Risk Assessment ,Post-operative complication ,Blood Vessel Prosthesis Implantation ,Risk Factors ,Occlusion ,medicine ,Humans ,Cardiac and Cardiovascular Systems ,Risk factor ,Aged ,Retrospective Studies ,Aged, 80 and over ,Sweden ,Kardiologi ,Graft thrombosis ,business.industry ,Incidence ,Kirurgi ,Endovascular Procedures ,Graft Occlusion, Vascular ,Postoperative complication ,Limb occlusion ,Retrospective cohort study ,medicine.disease ,Abdominal aortic aneurysm ,Surgery ,Blood Vessel Prosthesis ,Stenosis ,Treatment Outcome ,Nested case-control study ,Female ,Cardiology and Cardiovascular Medicine ,business ,Aortic Aneurysm, Abdominal - Abstract
Objective: Limb graft occlusion (LGO) is a serious complication after endovascular aneurysm repair (EVAR) and while device development enables treatment of increasingly complex aortic anatomy, little is known about how endograft type affects the risk of occlusion. This observational study aimed to explore the incidence of LGO after EVAR for three major endograft systems. Methods: All patients with standard EVAR as the primary intervention for infrarenal abdominal aortic aneurysm (AAA), between January 2012 and December 2018, at five Swedish vascular surgery centres, were included in this multicentre retrospective cohort study. LGO was defined as a total limb occlusion regardless of symptoms, or a treated significant stenosis. A nested case control (NCC) design with incidence density sampling of 1:3 was used for analysis of potential per-operative and morphological risk factors. Conditional logistic regression was used to estimate multivariable odds ratios (OR) with 95% confidence intervals (CI) Results: A total of 924 patients were included. The majority were male (84%), the mean age was 76 years (+/- 7.5 SD), and median AAA diameter was 59 mm (IQR 55, 67). Patients were treated with Zenith Alpha (n = 315, ZISL limbs), Excluder (n = 152, PLC/PXC limbs), and Endurant (n = 457, ETLW/ ETEW limbs). During median follow up of 37 months (IQR 21, 62), 55 occlusions occurred (5.9%); 39 with Zenith Alpha (12.4%), one with Excluder (0.7%), and 15 with Endurant (3.3%). In the NCC analysis, the Zenith Alpha device (OR 5.31, 95% CI 1.97 - 14.3), external iliac artery (EIA) landing (OR 5.91, 95% CI 1.30 - 26.7), and EIA diameter < 10 mm (OR 4.99, 95% CI 1.46 - 16.9) were associated with an increased risk of LGO. Conclusion: Endograft device type is an independent risk factor for LGO after EVAR. Specifically, the Zenith Alpha demonstrated an increased risk of LGO compared with the Endurant and Excluder devices. In addition, a narrow EIA and landing zone in EIA are also risk factors for LGO. Funding Agencies|Swedish Heart-Lung FoundationSwedish Heart-Lung Foundation [20180596]; Swedish Society of Medicine [SLS-174151]; Futurum Jonkoping county; Swedish Research CouncilSwedish Research CouncilEuropean Commission [12660, 20180867, 20180072]
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- 2021
175. Critically ill COVID-19 patients in Africa: it is time for quality registry data
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Pisani, Luigi, primary, Waweru-Siika, Wangari, additional, Sendagire, Cornelius, additional, Beane, Abi, additional, and Haniffa, Rashan, additional
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- 2021
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176. Dolutegravir or Darunavir in Combination with Zidovudine or Tenofovir to Treat HIV
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Paton, Nicholas I., primary, Musaazi, Joseph, additional, Kityo, Cissy, additional, Walimbwa, Stephen, additional, Hoppe, Anne, additional, Balyegisawa, Apolo, additional, Kaimal, Arvind, additional, Mirembe, Grace, additional, Tukamushabe, Phionah, additional, Ategeka, Gilbert, additional, Hakim, James, additional, Mugerwa, Henry, additional, Siika, Abraham, additional, Asienzo, Jesca, additional, Castelnuovo, Barbara, additional, Kiragga, Agnes, additional, and Kambugu, Andrew, additional
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- 2021
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177. Development of a quality indicator set to measure and improve quality of ICU care in low- and middle-income countries.
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Pari, Vrindha, Collaboration for Research Implementation, Training in Critical Care, Asia Africa 'CCAA', Sluijs, Eva Fleur, del Pilar Arias López, Maria, Thomson, David Alexander, Tripathy, Swagata, Vengadasalam, Sutharshan, Vijayaraghavan, Bharath Kumar Tirupakuzhi, Pisani, Luigi, de Keizer, Nicolette, Adhikari, Neill K. J., Pilcher, David, Inglis, Rebecca, Bulamba, Fred, Dondorp, Arjen M., Kooloth, Rohit Aravindakshan, Phua, Jason, Sendagire, Cornelius, Waweru-Siika, Wangari, and Mazlan, Mohd Zulfakar
- Abstract
Purpose: To develop a set of actionable quality indicators for critical care suitable for use in low- or middle-income countries (LMICs).Methods: A list of 84 candidate indicators compiled from a previous literature review and stakeholder recommendations were categorised into three domains (foundation, process, and quality impact). An expert panel (EP) representing stakeholders from critical care and allied specialties in multiple low-, middle-, and high-income countries was convened. In rounds one and two of the Delphi exercise, the EP appraised (Likert scale 1-5) each indicator for validity, feasibility; in round three sensitivity to change, and reliability were additionally appraised. Potential barriers and facilitators to implementation of the quality indicators were also reported in this round. Median score and interquartile range (IQR) were used to determine consensus; indicators with consensus disagreement (median < 4, IQR ≤ 1) were removed, and indicators with consensus agreement (median ≥ 4, IQR ≤ 1) or no consensus were retained. In round four, indicators were prioritised based on their ability to impact cost of care to the provider and recipient, staff well-being, patient safety, and patient-centred outcomes.Results: Seventy-one experts from 30 countries (n = 45, 63%, representing critical care) selected 57 indicators to assess quality of care in intensive care unit (ICU) in LMICs: 16 foundation, 27 process, and 14 quality impact indicators after round three. Round 4 resulted in 14 prioritised indicators. Fifty-seven respondents reported barriers and facilitators, of which electronic registry-embedded data collection was the biggest perceived facilitator to implementation (n = 54/57, 95%) Concerns over burden of data collection (n = 53/57, 93%) and variations in definition (n = 45/57, 79%) were perceived as the greatest barrier to implementation.Conclusion: This consensus exercise provides a common set of indicators to support benchmarking and quality improvement programs for critical care populations in LMICs. [ABSTRACT FROM AUTHOR]- Published
- 2022
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178. Hepatitis C virus (HCV) infection in Africa: a review
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Mercy Jelagat Karoney and Abraham Mosigisi Siika
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hepatitis c ,prevalence ,disease burden ,treatment ,prevention ,africa ,Medicine - Abstract
Hepatitis C virus (HCV) is a viral pandemic and a leading cause of chronic liver disease. This review highlights the epidemiology and management of Hepatitis C in Africa. We searched for articles on medline using the terms, "Hepatitis C", "Prevalence", "Epidemiology", "Africa" and "Treatment". The bibliographies of the articles found were used to find other references. We included articles published after 1995 only. The data was summarized and presented in tables and figures. Africa has the highest WHO estimated regional HCV prevalence (5.3%). Egypt has the highest prevalence (17.5%) of HCV in the world. Genotypes commonly found in Africa are 1, 4 and 5. Genotype 3 is found in Egypt and parts of Central Africa. Blood transfusion is a major means of acquisition of HCV infection. While treatment with peginterferon and ribavirin is recommended for patients with chronic HCV, no data were found on their use in Africa. Neither were there any data on definitive management (liver transplantation) for those with end stage disease. Data on HCV infection in Africa are scarce. This suggests that hepatitis C is still a neglected disease in many countries. Limited data exist in literature on HCV in Africa
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- 2013
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179. Active tuberculosis is associated with worse clinical outcomes in HIV-infected African patients on antiretroviral therapy.
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Abraham M Siika, Constantin T Yiannoutsos, Kara K Wools-Kaloustian, Beverly S Musick, Ann W Mwangi, Lameck O Diero, Sylvester N Kimaiyo, William M Tierney, and Jane E Carter
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Medicine ,Science - Abstract
This cohort study utilized data from a large HIV treatment program in western Kenya to describe the impact of active tuberculosis (TB) on clinical outcomes among African patients on antiretroviral therapy (ART).We included all patients initiating ART between March 2004 and November 2007. Clinical (signs and symptoms), radiological (chest radiographs) and laboratory (mycobacterial smears, culture and tissue histology) criteria were used to record the diagnosis of TB disease in the program's electronic medical record system.We assessed the impact of TB disease on mortality, loss to follow-up (LTFU) and incident AIDS-defining events (ADEs) through Cox models and CD4 cell and weight response to ART by non-linear mixed models.We studied 21,242 patients initiating ART-5,186 (24%) with TB; 62% female; median age 37 years. There were proportionately more men in the active TB (46%) than in the non-TB (35%) group. Adjusting for baseline HIV-disease severity, TB patients were more likely to die (hazard ratio--HR = 1.32, 95% CI 1.18-1.47) or have incident ADEs (HR = 1.31, 95% CI: 1.19-1.45). They had lower median CD4 cell counts (77 versus 109), weight (52.5 versus 55.0 kg) and higher ADE risk at baseline (CD4-adjusted odds ratio = 1.55, 95% CI: 1.31-1.85). ART adherence was similarly good in both groups. Adjusting for gender and baseline CD4 cell count, TB patients experienced virtually identical rise in CD4 counts after ART initiation as those without. However, the overall CD4 count at one year was lower among patients with TB (251 versus 269 cells/µl).Clinically detected TB disease is associated with greater mortality and morbidity despite salutary response to ART. Data suggest that identifying HIV patients co-infected with TB earlier in the HIV-disease trajectory may not fully address TB-related morbidity and mortality.
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- 2013
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180. Moisture-Responsive Polymer Films on Flexible Substrates for Optical Sensing of Humidity
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Katerina Lazarova, Darinka Christova, Siika Ivanova, Silvia Bozhilova, and Tsvetanka Babeva
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chemistry.chemical_classification ,Vinyl alcohol ,chemistry.chemical_compound ,Materials science ,chemistry ,Composite number ,Transmittance ,Relative humidity ,Polymer ,Substrate (electronics) ,Surface finish ,Composite material ,Layer (electronics) - Abstract
Rapid advances in material science and processing methods over the past decade accelerated the development of flexible and stretchable sensors for various innovative applications in healthcare, medicine, biology and environment. Such devices have the potential to be applied to soft surfaces of different shape like textile fabrics or human skin. Flexible substrates allow continuous roll processing, thus providing the potential for efficient and low cost mass production. In this paper a flexible humidity sensor is prepared by spin-coating of moisture-sensitive polymer on three types of substrates: poly(ethylene terephthalate) (PET), polylactide (PLA) and composite polysiloxane. The optical properties, surface morphology and roughness of the substrates are studied by transmittance measurements and surface profiling, respectively. Thin spin-coated polymer films of amphiphilic copolymer obtained by partial acetalization of poly(vinyl alcohol) are used as humidity sensitive media. In order to increase the sensitivity a thin metal layer of Au-Pd is incorporated between the polymer film and substrate. The thickness of metal layer is optimized in order the transmittance level of the sensor to be in the range 40-50%. The sensing properties are probed through transmittance measurements at different levels of relative humidity (RH). The influence of substrate type is studied by comparing hysteresis and sensitivity of flexible sensors with those deposited on glass substrate. The successful application of the designed flexible humidity sensors is demonstrated and discussed.
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- 2020
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181. Complete utilisation of biomass in alkaline oxidation (AlkOx) biorefinery
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Hörhammer, Hanna, Siika-aho, Matti, and Sirviö, Jari
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SDG 13 - Climate Action - Abstract
With climate change and material shortage, efficient usage of resources is very crucial in current and future biomass processing. Biorefineries generally aim at converting all parts of the biomass material into bioproducts, also efficiently utilising side and waste streams. Each biorefinery has specific characteristics depending on input material, processes and products. An AlkOx biorefinery is based on an alkaline oxidation process. Due to the usage of oxygen and the alkaline oxidation reaction, the AlkOx products have unique characteristics that have high potential for certain applications. VTT has developed a two-stage AlkOx process for efficient fractionation of lignocellulosic biomass. The method relies on two cooking stages. The first stage is to extract the main part of the hemicelluloses, and the second stage is to delignify the remaining fraction applying Na2CO3 and O2. The AlkOx process can be applied on different types of biomass i.e. hardwood, softwood, waste wood and agro residues. The process conditions can be adjusted based on the raw material and the desired characteristics of the fractions produced. The AlkOx process provides a cellulose rich fibre fraction and cooking liquors. The liquor from the 1st stage contains hemicellulose-derived compounds, whereas the 2nd stage liquor contains sulphur free lignin. The fibre fraction can be used either for sugar production and further to fermentation, or then through dissolving pulp to textile fibre production. Cellulose nanofibre (CNF) films could also be an alternative application for the fibre fraction. The hemicelluloses could be further processed for cosmetics or food applications, or converted to C5 sugars and further to platform chemicals. The oxidised sulphur free lignin has unique characteristics, and could be separated from the cooking liquor in order to be utilised e.g. as metal chelating agents, concrete plasticisers or dispersants for paints and coatings. The chemistry in the AlkOx biorefinery is simple and the process is sulphur free. The AlkOx biorefinery could be a large stand-alone production plant, a smaller plant integrated to a kraft pulp mill, or a small stand-alone plant with novel chemical recovery solution. The energy and recovery aspects of the AlkOx biorefinery still need to be evaluated in more detail. The AlkOx biorefinery shows high potential for complete utilization of biomass. High yields of multiple high-value products offer avenues for feasibility and profitability of the AlkOx biorefinery.
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- 2020
182. Production of syrup rich in arabinoxylan oligomers and antioxidants from wheat bran by alkaline pretreatment and enzymatic hydrolysis, and applicability in baking
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Emilia Nordlund, Lotta Sorsamäki, Ville Pihlajaniemi, Raija-Liisa Heiniö, Outi Mattila, Markus Nikinmaa, Taru Koitto, and Matti Siika-aho
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0106 biological sciences ,Flavour ,Added sugar ,01 natural sciences ,Biochemistry ,Lignocellulose hydrolysis ,Hydrolysis ,chemistry.chemical_compound ,0404 agricultural biotechnology ,Enzymatic hydrolysis ,Arabinoxylan ,parasitic diseases ,Food science ,Techno-economic analysis ,Sensory evaluation ,Potassium hydroxide ,Bran ,Chemistry ,digestive, oral, and skin physiology ,food and beverages ,04 agricultural and veterinary sciences ,Carbohydrate ,040401 food science ,Soluble dietary fibre ,010606 plant biology & botany ,Food Science - Abstract
The target of this work was to develop a novel, industrially applicable process for simultaneously releasing different valuable components from wheat bran, including carbohydrates, oligomeric arabinoxylan and antioxidants. The process was based on alkaline pretreatment with potassium hydroxide (KOH) and subsequent enzymatic hydrolysis. Increasing KOH-dosage and thermal severity in pretreatment promoted carbohydrate solubilisation in hydrolysis, reaching glucose and arabinoxylan yields up to 86% and 76%, respectively. Release of antioxidants was particularly promoted by increasing KOH-dosage, while both the pretreatment severity and KOH-dosage promoted the release of oligomeric arabinoxylan in enzymatic hydrolysis. Two bran syrups, with or without KOH-treatment, were tested in bread making by substituting added sugar in the dough with bran syrup. The KOH-derived KCl also substituted 30% of NaCl in the bread formulation. The addition of bran syrup did not affect the baking properties of wheat bread dough. However, a decrease in bread flavour balance was observed with addition of syrup from KOH-pretreated bran. Conceptual level techno-economic assessment indicated that production of bran syrup would be economically feasible at a minimum selling price of 770 €/t and 1030 €/t with KOH-pretreatment and without KOH, respectively.
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- 2020
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183. The cost-effectiveness of prophylaxis strategies for individuals with advanced HIV starting treatment in Africa
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Walker, SM, Cox, E, Revill, P, Musiime, V, Bwakura‐Dangarembizi, M, Mallewa, J, Cheruiyot, P, Maitland, K, Ford, N, Gibb, DM, Walker, AS, Soares, M, Mugyenyi, P, Kityo, C, Wavamunno, P, Nambi, E, Ocitti, P, Ndigendawani, M, Kabahenda, S, Kemigisa, M, Acen, J, Olebo, D, Mpamize, G, Amone, A, Okweny, D, Mbonye, A, Nambaziira, F, Rweyora, A, Kangah, M, Kabaswahili, V, Abach, J, Abongomera, G, Omongin, J, Aciro, I, Philliam, A, Arach, B, Ocung, E, Amone, G, Miles, P, Adong, C, Tumsuiime, C, Kidega, P, Otto, B, Apio, F, Baleeta, K, Mukuye, A, Abwola, M, Ssennono, F, Baliruno, D, Tuhirwe, S, Namisi, R, Kigongo, F, Kikyonkyo, D, Mushahara, F, Tusiime, J, Musiime, A, Nankya, A, Atwongyeire, D, Sirikye, S, Mula, S, Noowe, N, Lugemwa, A, Kasozi, M, Mwebe, S, Atwine, L, Senkindu, T, Natuhurira, T, Katemba, C, Ninsiima, E, Acaku, M, Kyomuhangi, J, Ankunda, R, Tukwasibwe, D, Ayesiga, L, Hakim, J, Nathoo, K, Reid, A, Chidziva, E, Mhute, T, Tinago, GC, Bhiri, J, Mudzingwa, S, Phiri, M, Steamer, J, Nhema, R, Warambwa, C, Musoro, G, Mutsai, S, Nemasango, B, Moyo, C, Chitongo, S, Rashirai, K, Vhembo, S, Mlambo, B, Nkomani, S, Ndemera, B, Willard, M, Berejena, C, Musodza, Y, Matiza, P, Mudenge, B, Guti, V, Etyang, A, Agutu, C, Berkley, J, Njuguna, P, Mwaringa, S, Etyang, T, Awuondo, K, Wale, S, Shangala, J, Kithunga, J, Mwarumba, S, Said Maitha, S, Mutai, R, Lozi Lewa, M, Mwambingu, G, Mwanzu, A, Kalama, C, Latham, H, Shikuku, J, Fondo, A, Njogu, A, Khadenge, C, Mwakisha, B, Siika, A, Wools‐Kaloustian, K, Nyandiko, W, Sudoi, A, Wachira, S, Meli, B, Karoney, M, Nzioka, A, Tanui, M, Mokaya, M, Ekiru, W, Mboya, C, Mwimali, D, Mengich, C, Choge, J, Injera, W, Njenga, K, Cherutich, S, Anyango Orido, M, Omondi Lwande, G, Rutto, P, Mudogo, A, Kutto, I, Shali, A, Jaika, L, Jerotich, H, Pierre, M, Kaunda, S, Van Oosterhout, J, O'Hare, B, Heydermann, R, Gonzalez, C, Dzabala, N, Kelly, C, Denis, B, Selemani, G, Nyondo Mipando, L, Chirwa, E, Banda, P, Mvula, L, Msuku, H, Ziwoya, M, Manda, Y, Nicholas, S, Masesa, C, Mwalukomo, T, Makhaza, L, Sheha, I, Bwanali, J, Limbuni, M, Gibb, D, Thomason, M, Pett, S, Szubert, A, Griffiths, A, Wilkes, H, Rajapakse, C, Spyer, M, Prendergast, A, Klein, N, Rauchenberger, M, Van Looy, N, Little, E, Fairbrother, K, Cowan, F, Seeley, J, Bernays, S, Kawuma, R, Mupambireyi, Z, Kyomuhendo, F, Nakalanzi, S, Peshu, J, Ndaa, S, Chabuka, J, Mkandawire, N, Matandika, L, Kapuya, C, Weller, I, Malianga, E, Mwansambo, C, Miiro, F, Elyanu, P, Bukusi, E, Katabira, E, Mugurungi, O, Peto, T, Musoke, P, Matenga, J, Phiri, S, Lyall, H, Johnston, V, Fitzgerald, F, Post, F, Ssali, F, Arenas‐Pinto, A, Turkova, A, Bamford, A, Academic Medical Center, and DiFDMRCWellcome Trust
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Male ,Antifungal Agents ,Cost effectiveness ,Cost-Benefit Analysis ,Human immunodeficiency virus (HIV) ,HIV Infections ,medicine.disease_cause ,Cohort Studies ,0302 clinical medicine ,late‐presenters ,fluconazole ,Advanced disease ,Global health ,030212 general & internal medicine ,Child ,Research Articles ,health care economics and organizations ,education.field_of_study ,cost‐effectiveness ,3. Good health ,Infectious Diseases ,Child, Preschool ,Female ,Quality-Adjusted Life Years ,prophylaxis ,0305 other medical science ,Post-Exposure Prophylaxis ,medicine.drug ,Research Article ,Adult ,medicine.medical_specialty ,Tuberculosis ,Antigens, Fungal ,Adolescent ,Cryptococcal antigen ,Anti-HIV Agents ,Population ,late-presenters ,1117 Public Health and Health Services ,03 medical and health sciences ,medicine ,Humans ,education ,cost-effectiveness ,030505 public health ,AIDS-Related Opportunistic Infections ,business.industry ,Public Health, Environmental and Occupational Health ,HIV ,1103 Clinical Sciences ,medicine.disease ,CD4 Lymphocyte Count ,Cryptococcus ,Emergency medicine ,Africa ,business ,Fluconazole ,1199 Other Medical and Health Sciences - Abstract
Introduction: Many HIV-positive individuals in Africa have advanced disease when initiating antiretroviral therapy (ART) so have high risks of opportunistic infections and death. The REALITY trial found that an enhanced-prophylaxis package including fluconazole reduced mortality by 27% in individuals starting ART with CD4
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- 2020
184. Geometric and biomechanical progression in abdominal aortic aneurysms over time
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Siika, A, Bogdanovic, M, Lindquist Liljeqvist, M, Hultgren, R, Gasser, C, Roy, J, Siika, A, Bogdanovic, M, Lindquist Liljeqvist, M, Hultgren, R, Gasser, C, and Roy, J
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- 2021
185. Endograft type is a risk factor for limb graft occlusion in patients treated with EVAR
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Bogdanovic, M, Huss, M, Stackelberg, O, Lindström, D, Ersryd, S, Andersson, M, Roos, H, Siika, A, Jonsson, M, Roy, J, Bogdanovic, M, Huss, M, Stackelberg, O, Lindström, D, Ersryd, S, Andersson, M, Roos, H, Siika, A, Jonsson, M, and Roy, J
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- 2021
186. Aortic biomechanics and early sac regression after Endovascular Aneurysm Repair
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Bogdanovic, M, Siika, A, Lindquist Liljekvist, M, Gasser, C, Hultgren, R, Roy, J, Bogdanovic, M, Siika, A, Lindquist Liljekvist, M, Gasser, C, Hultgren, R, and Roy, J
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- 2021
187. Geometric and biomechanical modeling aided by machine learning improves the prediction of growth and rupture of small abdominal aortic aneurysms
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Liljeqvist, Moritz Lindquist, Bogdanovic, Marko, Siika, Antti, Gasser, T. Christian, Hultgren, Rebecka, Roy, Joy, Liljeqvist, Moritz Lindquist, Bogdanovic, Marko, Siika, Antti, Gasser, T. Christian, Hultgren, Rebecka, and Roy, Joy
- Abstract
It remains difficult to predict when which patients with abdominal aortic aneurysm (AAA) will require surgery. The aim was to study the accuracy of geometric and biomechanical analysis of small AAAs to predict reaching the threshold for surgery, diameter growth rate and rupture or symptomatic aneurysm. 189 patients with AAAs of diameters 40-50 mm were included, 161 had undergone two CTAs. Geometric and biomechanical variables were used in prediction modelling. Classifications were evaluated with area under receiver operating characteristic curve (AUC) and regressions with correlation between observed and predicted growth rates. Compared with the baseline clinical diameter, geometric-biomechanical analysis improved prediction of reaching surgical threshold within four years (AUC 0.80 vs 0.85, p = 0.031) and prediction of diameter growth rate (r = 0.17 vs r = 0.38, p = 0.0031), mainly due to the addition of semiautomatic diameter measurements. There was a trend towards increased precision of volume growth rate prediction (r = 0.37 vs r = 0.45, p = 0.081). Lumen diameter and biomechanical indices were the only variables that could predict future rupture or symptomatic AAA (AUCs 0.65-0.67). Enhanced precision of diameter measurements improves the prediction of reaching the surgical threshold and diameter growth rate, while lumen diameter and biomechanical analysis predicts rupture or symptomatic AAA., QC 20211027
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- 2021
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188. The frequency of malaria is similar among women receiving either lopinavir/ritonavir or nevirapine-based antiretroviral treatment.
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Tina S Skinner-Adams, Alice S Butterworth, Kimberly A Porter, Ronald D'Amico, Fred Sawe, Doug Shaffer, Abraham Siika, Mina C Hosseinipour, Elizabeth Stringer, Judith S Currier, Tsungai Chipato, Robert Salata, Shahin Lockman, Joseph J Eron, Steven R Meshnick, and James S McCarthy
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Medicine ,Science - Abstract
HIV protease inhibitors (PIs) show antimalarial activity in vitro and in animals. Whether this translates into a clinical benefit in HIV-infected patients residing in malaria-endemic regions is unknown. We studied the incidence of malaria, as defined by blood smear positivity or a positive Plasmodium falciparum histidine-rich protein 2 antigen test, among 444 HIV-infected women initiating antiretroviral treatment (ART) in the OCTANE trial (A5208; ClinicalTrials.gov: NCT00089505). Participants were randomized to treatment with PI-containing vs. PI-sparing ART, and were followed prospectively for ≥48 weeks; 73% also received cotrimoxazole prophylaxis. PI-containing treatment was not associated with protection against malaria in this study population.
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- 2012
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189. Human Immunodeficiency Virus and Leprosy Coinfection: Challenges in Resource-Limited Setups
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Charles M. Kwobah, Kara K. Wools-Kaloustian, Jane N. Gitau, and Abraham M. Siika
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Medicine - Abstract
Mycobacteria leprae(leprosy) and HIV coinfection are rare in Kenya. This is likely related to the low prevalence (1 per 10,000 of population) of leprosy. Because leprosy is no longer a public health challenge there is generally a low index of suspicion amongst clinicians for its diagnosis. Management of a HIV-1-leprosy-coinfected individual in a resource-constrained setting is challenging. Some of these challenges include difficulties in establishing a diagnosis of leprosy; the high pill burden of cotreatment with both antileprosy and antiretroviral drugs (ARVs); medications’ side effects; drug interactions; scarcity of drug choices for both diseases. This challenge is more profound when managing a patient who requires second-line antiretroviral therapy (ART). We present an adult male patient coinfected with HIV and leprosy, who failed first-line antiretroviral therapy (ART) and required second-line treatment. Due to limited choices in antileprosy drugs available, the patient received monthly rifampicin and daily lopinavir-/ritonavir-based antileprosy and ART regimens, respectively. Six months into his cotreatment, he seemed to have adequate virological control. This case report highlights the challenges of managing such a patient.
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- 2012
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190. Short-Term Rationing of Combination Antiretroviral Therapy: Impact on Morbidity, Mortality, and Loss to Follow-Up in a Large HIV Treatment Program in Western Kenya
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April J. Bell, Kara Wools-Kaloustian, Sylvester Kimaiyo, Hai Liu, Adrian Katschke, Changyu Shen, Gilbert Simiyu, Beverly S. Musick, John E. Sidle, Abraham Siika, and Paula Braitstein
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Immunologic diseases. Allergy ,RC581-607 - Abstract
Background. There was a 6-month shortage of antiretrovirals (cART) in Kenya. Methods. We assessed morbidity, mortality, and loss to follow-up (LTFU) in this retrospective analysis of adults who were enrolled during the six-month period with restricted cART (cap) or the six months prior (pre-cap) and eligible for cART at enrollment by the pre-cap standard. Cox models were used to adjust for potential confounders. Results. 9009 adults were eligible for analysis: 4,714 pre-cap and 4,295 during the cap. Median number of days from enrollment to cART initiation was 42 pre-cap and 56 for the cap (P
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- 2012
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191. Method for characterization of the enzyme profile and the determination of CBH I (Cel 7a) core protein in Trichoderma reesei cellulase preparations
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Zandoná Filho, A., Siika-Aho, M., and Ramos, L.P.
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- 2006
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192. Colanic acid is an exopolysaccharide common to many enterobacteria isolated from paper-machine slimes
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Rättö, M., Verhoef, R., Suihko, M. -L., Blanco, A., Schols, H. A., Voragen, A. G. J., Wilting, R., Siika-aho, M., and Buchert, J.
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- 2006
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193. Irrelevant Updates of Nonmonotonic Knowledge Bases.
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Ján Sefránek and Jozef Siika
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- 2006
194. Deposition of xylan isolated from Pennisetum purpureum on fibres of Eucalyptus globulus and characterisation of the composition of the surface xylans by immunolabelling and enzymatic peeling
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Tarja Tamminen, Matti Siika-aho, Jaakko Pere, Fernando José Borges Gomes, Atte Mikkelson, Jorge Luiz Colodette, and Kristiina Kruus
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0106 biological sciences ,animal structures ,02 engineering and technology ,macromolecular substances ,Xylose ,01 natural sciences ,Biomaterials ,chemistry.chemical_compound ,Hydrolysis ,Eucalyptus globulus ,immunolabelling ,010608 biotechnology ,Enzymatic hydrolysis ,Botany ,Lignin ,Pennisetum purpureum ,elephant grass ,biology ,Chemistry ,technology, industry, and agriculture ,food and beverages ,enzymatic hydrolysis ,fibre surface composition ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Xylan ,carbohydrates (lipids) ,Composition (visual arts) ,0210 nano-technology - Abstract
Adsorption of xylan on pulp is a potential method to improve its properties, especially refinability for high quality printing and writing (P&W) paper grades. In this study, elephant grass [ Pennisetum purpureum (Schumach.)] xylan was used for this purpose. The xylan was extracted using cold caustic extraction (CCE) from P. purpureum brown pulp, produced by the Soda-AQ process (kappa 20). Xylan resorption was accomplished during the oxygen delignification phase of eucalypt [ Eucalyptus globulus (Labill.)] pulp to avoid problems induced by the colour of the lignin-contaminated deposited xylan. Immunolabelling and enzymatic peeling methodologies were compared for the analysis of the spatial distribution of xylan in the fibre wall. The labelling appeared unevenly as faint and brighter patches on fibre surfaces. Increased labelling of xylan was detected on the samples with precipitated P. purpureum xylan. The enzymatic peeling method using a total hydrolysis enzyme mixture yielded a composition gradient as a function of time, showing clear xylose (Xyl) enrichment in the very beginning of the reaction, reflecting hydrolysis of fibre surfaces. Pure xylanase and endoglucanase hydrolyses yielded different product patterns and kinetics compared to total hydrolysis, but interpretation of those results in terms of xylan localisation was not straightforward. Deposition of xylan isolated from Pennisetum purpureum on fibres of Eucalyptus globulus and characterisation of the composition of the surface xylans by immunolabelling and enzymatic peeling | Request PDF. Available from: https://www.researchgate.net/publication/327595575_Deposition_of_xylan_isolated_from_Pennisetum_purpureum_on_fibres_of_Eucalyptus_globulus_and_characterisation_of_the_composition_of_the_surface_xylans_by_immunolabelling_and_enzymatic_peeling [accessed Sep 18 2018].
- Published
- 2018
- Full Text
- View/download PDF
195. High temperature enzymatic prehydrolysis prior to simultaneous saccharification and fermentation of steam pretreated corn stover for ethanol production
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Öhgren, Karin, Vehmaanperä, Jari, Siika-Aho, Matti, Galbe, Mats, Viikari, Liisa, and Zacchi, Guido
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- 2007
- Full Text
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196. Polysaccharide-producing bacteria isolated from paper machine slime deposits
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Rättö, M., Suihko, M. -L., and Siika-aho, M.
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- 2005
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197. Implementing enhanced patient care to promote patient engagement in HIV care in a rural setting in Kenya
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Wachira, Juddy, primary, Genberg, Becky, additional, Chemutai, Diana, additional, Mwangi, Ann, additional, Galarraga, Omar, additional, Abraham, Siika, additional, and Wilson, Ira, additional
- Published
- 2021
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- View/download PDF
198. Proteoglycan 4 Modulates Osteogenic Smooth Muscle Cell Differentiation during Vascular Remodeling and Intimal Calcification
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Seime, Till, primary, Akbulut, Asim Cengiz, additional, Liljeqvist, Moritz Lindquist, additional, Siika, Antti, additional, Jin, Hong, additional, Winski, Greg, additional, van Gorp, Rick H., additional, Karlöf, Eva, additional, Lengquist, Mariette, additional, Buckler, Andrew J., additional, Kronqvist, Malin, additional, Waring, Olivia J., additional, Lindeman, Jan H. N., additional, Biessen, Erik A. L., additional, Maegdefessel, Lars, additional, Razuvaev, Anton, additional, Schurgers, Leon J., additional, Hedin, Ulf, additional, and Matic, Ljubica, additional
- Published
- 2021
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- View/download PDF
199. Implementation of Fingerprint Technology for Unique Patient Matching and Identification at an HIV Care and Treatment Facility in Western Kenya: Cross-sectional Study (Preprint)
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Jaafa, Noah Kasiiti, primary, Mokaya, Benard, additional, Savai, Simon Muhindi, additional, Yeung, Ada, additional, Siika, Abraham Mosigisi, additional, and Were, Martin, additional
- Published
- 2021
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200. Critically ill COVID-19 patients in Africa: it is time for quality registry data
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Cornelius Sendagire, Rashan Haniffa, Wangari Waweru-Siika, Abi Beane, and Luigi Pisani
- Subjects
medicine.medical_specialty ,2019-20 coronavirus outbreak ,Coronavirus disease 2019 (COVID-19) ,SARS-CoV-2 ,Critically ill ,business.industry ,Critical Illness ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,media_common.quotation_subject ,MEDLINE ,COVID-19 ,General Medicine ,Intensive Care Units ,Correspondence ,Critical illness ,medicine ,Humans ,Registry data ,Quality (business) ,Registries ,Intensive care medicine ,business ,media_common - Published
- 2021
- Full Text
- View/download PDF
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