881 results on '"Cyclobutanes chemistry"'
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152. Fluorescent Neuraminidase Assay Based on Supramolecular Dye Capture After Enzymatic Cleavage.
- Author
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Liu W, Gómez-Durán CFA, and Smith BD
- Subjects
- Animals, Macromolecular Substances chemistry, Macromolecular Substances metabolism, Orthomyxoviridae Infections diagnosis, Cyclobutanes chemistry, Cyclobutanes metabolism, Enzyme Assays methods, Fluorescence, Fluorescent Dyes chemistry, Fluorescent Dyes metabolism, Neuraminidase chemistry, Neuraminidase metabolism, Orthomyxoviridae Infections enzymology, Phenols chemistry, Phenols metabolism
- Abstract
A conceptually new type of enzymatic cleavage assay is reported that utilizes in situ supramolecular capture of the fluorescent product. A squaraine-derived substrate with large blocking groups at each end of its structure cannot be threaded by a tetralactam macrocycle until the blocking groups are removed by enzyme cleavage. A prototype design responds to viral neuraminidase, an indicator of influenza infection, and also measures susceptibility of the sample to neuraminidase inhibitor drugs. The substrate structure incorporates three key features: (a) a bis(4-amino-3-hydroxyphenyl)squaraine core with bright deep-red fluorescence and excellent photostability, (b) an N-methyl group at each end of the squaraine core that ensures fast macrocycle threading kinetics, and (c) sialic acid blocking groups that prevent macrocycle threading until they are removed by viral neuraminidase. The enzyme assay can be conducted in aqueous solution where dramatic colorimetric and fluorescence changes are easily observed by the naked eye. Alternatively, affinity capture beads coated with macrocycle can be used to immobilize the liberated squaraine and enable a range of heterogeneous analysis options. With further optimization, this new type of neuraminidase assay may be useful in a point of care clinic to rapidly diagnose influenza infection and also determine which of the approved antiviral inhibitor drugs is likely to be the most effective treatment for an individual patient. The assay design is generalizable and can be readily modified to monitor virtually any type of enzyme-catalyzed cleavage reaction.
- Published
- 2017
- Full Text
- View/download PDF
153. Conjugate Vaccines from Bacterial Antigens by Squaric Acid Chemistry: A Closer Look.
- Author
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Xu P, Kelly M, Vann WF, Qadri F, Ryan ET, and Kováč P
- Subjects
- Animals, Antigens, Bacterial chemistry, Cattle, Cholera immunology, Cholera Vaccines chemistry, Cyclobutanes chemical synthesis, Cyclobutanes chemistry, Glycoconjugates chemical synthesis, Glycoconjugates chemistry, Humans, Hydrogen-Ion Concentration, Mice, Peptide Fragments chemistry, Peptide Fragments immunology, Serum Albumin, Bovine chemistry, Serum Albumin, Bovine immunology, Tetanus Toxin chemistry, Tetanus Toxin immunology, Typhoid Fever immunology, Vaccines, Conjugate chemistry, Vaccines, Conjugate immunology, Vibrio cholerae, Antigens, Bacterial immunology, Cholera Vaccines immunology, Cyclobutanes immunology, Glycoconjugates immunology
- Abstract
By using O-SP-core (O-SPcNH
2 ) polysaccharide, isolated from Vibrio cholera O1 lipopolysaccharide (LPS) and related synthetic substances, a detailed study of factors that affect conjugation of bacterial polysaccharides to protein carriers through squaric acid chemistry to form conjugate vaccines has been carried out. Several previously unrecognized processes that take place during the squarate labeling of the O-SPcNH2 and subsequent conjugation of the formed squarate (O-SPcNH-SqOMe) have been identified. The efficiency of conjugation at pH 8.5, 9.0, and 9.5 to bovine serum albumin (BSA) and to the recombinant tetanus toxin fragment C (rTT-Hc) has been determined. The study led to a protocol for more efficient labeling of O-SPcNH2 antigen with the methyl squarate group, to yield a higher-quality, more potent squarate conjugation reagent. Its use resulted in about twofold increases in conjugation efficiency (from 23-26 % on BSA to 51 % on BSA and 55 % on rTT-Hc). The spent conjugation reagent could be recovered and regenerated by treatment with MeI in the absence of additional base. The immunological properties of the experimental vaccine made from the regenerated conjugation reagent were comparable with those of the immunogen made from the parent O-SPcNH-SqOMe., (© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)- Published
- 2017
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154. Total Synthesis and Structural Revision of Clavilactone D.
- Author
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Takao KI, Nemoto R, Mori K, Namba A, Yoshida K, and Ogura A
- Subjects
- 4-Butyrolactone analogs & derivatives, 4-Butyrolactone chemical synthesis, 4-Butyrolactone chemistry, Basidiomycota chemistry, Biological Products chemistry, Cyclobutanes chemical synthesis, Cyclobutanes chemistry, Lactones chemistry, Protein Kinase Inhibitors chemistry, Stereoisomerism, Biological Products chemical synthesis, Lactones chemical synthesis, Protein Kinase Inhibitors chemical synthesis, Protein-Tyrosine Kinases antagonists & inhibitors
- Abstract
A structural revision of clavilactone D, a potent inhibitor of protein tyrosine kinases, was achieved by total syntheses of two newly proposed structures. The syntheses relied on ring-opening/ring-closing metathesis, which transformed a cyclobutenecarboxylate into a γ-butenolide. The syntheses confirmed that the correct structure of clavilactone D has an amino group at C-3 instead of a hydroxy group at C-2 in the originally proposed structure., (© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2017
- Full Text
- View/download PDF
155. Real-time near-infrared bioimaging of a receptor-targeted cytotoxic dendritic theranostic agent.
- Author
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Wu J, Zhou Y, Li S, Qu D, Zhu WH, and Tian H
- Subjects
- A549 Cells, Animals, Antimetabolites, Antineoplastic administration & dosage, Cell Line, Tumor, Computer Systems, Dendrimers chemistry, Female, Fluorescent Dyes, Fluorouracil chemistry, Humans, Infrared Rays, Mice, Mice, Inbred BALB C, Mice, Nude, Molecular Targeted Therapy methods, Nanocapsules chemistry, Nanocapsules ultrastructure, Nanoconjugates administration & dosage, Nanoconjugates chemistry, Nanoconjugates ultrastructure, Neoplasms, Experimental metabolism, Substance P chemistry, Substance P pharmacokinetics, Theranostic Nanomedicine methods, Treatment Outcome, Cyclobutanes chemistry, Fluorouracil administration & dosage, Nanocapsules administration & dosage, Neoplasms, Experimental diagnostic imaging, Neoplasms, Experimental drug therapy, Phenols chemistry, Receptors, Neurokinin-1 metabolism, Substance P administration & dosage
- Abstract
Efficient and site-specific delivery of anticancer drugs to tumors is important in the development of effective cancer chemotherapy. As an undecapeptide of the tachykinin neuropeptide family, the substance P (SP)/neurokinin-1 receptor (NK1R) system has been identified as a promising ligand-receptor pair in tumor-specific drug delivery. However, the rational design of suitable theranostic agents with high drug loading capacity and tumor targeting for cancer patients remains a great challenge. Herein, we report a dendritic strategy that utilizes the two amine functionalities of lysine to create branch points that allow conjugation of the anticancer drug 5-fluorouracil (5-FU) to the tumor-targeting ligand substance P, along with an additional near-infrared (NIR) squaraine dye, to construct a theranostic dendritic agent, P-FU 4. This cytotoxic theranostic agent, containing four carboxyl-modified 5-FU molecules, has several desirable advantages: i) the ability to self-assemble into nanoparticles; ii) enhanced cytotoxicity with high drug loading capacity (16%) and a specific receptor-targeted interaction with NK1R through the SP moiety; and iii) a high NIR squaraine fluorescence efficiency due to the specific dendron isolation, avoiding aggregation-mediated quenching. As demonstrated in this report, the cytotoxic activity of P-FU 4 is dose-dependent against the tested cancer cells. The improved drug loading capacity with dendritic branching distinctly enhanced cytotoxicity to tumor cells but had little effect on the viability of normal cells. P-FU 4 was preferentially taken up by tumor cells through a receptor-mediated interaction, which was monitored by effective NIR fluorescence with high tissue penetration. Studies using a mouse model revealed that P-FU 4 can significantly inhibit tumor progression, with a tumor-inhibition rate of 60.2%. The receptor-targeted cytotoxic dendritic theranostic agent is highly preferable to standard chemotherapeutic treatments and decreases the negative side effects of medications on healthy cells, which establishes its utility in drug delivery and cancer chemotherapy., (Copyright © 2016 Elsevier Ltd. All rights reserved.)
- Published
- 2017
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156. Sensitive fluorescent detection of H 2 O 2 and glucose in human serum based on inner filter effect of squaric acid-iron(III) on the fluorescence of upconversion nanoparticle.
- Author
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Chen H, Fang A, He L, Zhang Y, and Yao S
- Subjects
- Filtration, Humans, Blood Glucose analysis, Cyclobutanes chemistry, Hydrogen Peroxide blood, Iron chemistry, Limit of Detection, Nanoparticles chemistry, Spectrometry, Fluorescence methods
- Abstract
Diabetes mellitus is an epidemic disease that it has became a worldwide public health problem. Thus, blood glucose monitoring has attracted extensive attention. Here, we report a nanosensor based on inner filter effect (IFE) between upconversion nanoparticles (UCNPs) and squaric acid (SQA)-iron(III) for the highly sensitive and selective detection of glucose levels in human serum. In this assay, GOx-catalyzed oxidization of glucose produces gluconic acid and hydrogen peroxide (H
2 O2 ). The latter can catalytically oxidize iron(II) to iron(III) which can rapidly (<1min) coordinate with the SQA to produce (SQA)-iron(III). The absorption band of (SQA)-iron(III) largely covered the emission band of UCNPs, resulting the fluorescence emission of UCNPs was effectively quenched. Therefore, the glucose can be monitored based on the formation of SQA-iron(III). Under the optimal condition, the fluorescence quenching efficiency shows a good linear response to glucose concentration in the ranges of 7-340μmol/L with a detection limit of 2.3μmol/L. The developed method has been further applied to monitor glucose levels in human serum with satisfactory results. Compared with other fluorescence methods, current method displayed high sensitivity and signal-to-noise ratio. Meanwhile, this nanosystem is also generalizable and can be easily expanded to the detection of various H2 O2 -involved analytes., (Copyright © 2016 Elsevier B.V. All rights reserved.)- Published
- 2017
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157. Hierarchical self-assembly of squaraine and silica nanoparticle functionalized with cationic coordination sites for near infrared detection of ATP.
- Author
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Feng R, Shi W, Wang D, Wen J, Li H, Sun S, and Xu Y
- Subjects
- Biosensing Techniques, Hydrogen-Ion Concentration, Infrared Rays, Ions, Microscopy, Confocal, Molecular Imaging, Solutions, Adenosine Triphosphate chemistry, Cations chemistry, Cyclobutanes chemistry, Nanoparticles chemistry, Nanoparticles ultrastructure, Phenols chemistry, Silicon Dioxide chemistry
- Abstract
Optical activity of hierarchical supramolecular assemblies based on organic dyes would create multiple functional architectures. In this work, three kinds of silica nanoparticles with or without functional groups were synthesized. For the first time, silica nanoparticles can induce positively charged squaraine (SQ) to aggregate to form supramolecular assemblies. Adenosine-5'-triphosphate (ATP) as building blocks was absorbed on the surface of silica nanoparticles through metal-anion coordination and electrostatic interactions, in which the aggregates of SQ was transferred to monomer. The thickness being composed of ATP and SQ on the outside of nanoparticles is about 5 nm. These supramolecular assemblies showed selective turn-on fluorescence response to ATP in near infrared (NIR) region over other ions through metal-anion coordination and electrostatic interactions. These functional silica nanoparticles possessing many advantages provide proof-of-principle "seed crystals" for construction of supramolecular assemblies and platforms for sensing with facile performance.
- Published
- 2017
- Full Text
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158. Squarate-based carbocyclic nucleosides: Syntheses, computational analyses and anticancer/antiviral evaluation.
- Author
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Lu M, Lu QB, and Honek JF
- Subjects
- Antineoplastic Agents chemical synthesis, Antineoplastic Agents chemistry, Antiviral Agents chemistry, Cell Line, Tumor, Cell Proliferation drug effects, Cyclobutanes chemical synthesis, Cyclobutanes chemistry, Dose-Response Relationship, Drug, Drug Screening Assays, Antitumor, Humans, Models, Molecular, Molecular Structure, Nucleosides chemical synthesis, Nucleosides chemistry, Structure-Activity Relationship, Antineoplastic Agents pharmacology, Antiviral Agents chemical synthesis, Cyclobutanes pharmacology, Nucleosides pharmacology
- Abstract
Squaric acid and its derivatives are versatile synthons and have demonstrated applications in medicinal chemistry, notably as non-classical bioisosteric replacements for functional groups such as carboxylic acids, alpha-amino acids, urea, guanidine, peptide bonds and phosphate/pyrophosphate linkages. Surprisingly, no reports have appeared concerning its possible application as a nucleobase substitute in nucleosides. A preliminary investigation of such an application is reported herein. 3-Amino-4-((1R,4S)-4-(hydroxymethyl)cyclopent-2-en-1-yl)amino-cyclobut-3-ene-1,2-dione, 3-((1R,4S)-4-(hydroxymethyl)cyclopent-2-en-1-yl)amino-4-methoxycyclobut-3-ene-1,2-dione, and 3-hydroxy-4-((1R,4S)-4-(hydroxymethyl)cyclopent-2-en-1-yl)amino-cyclobut-3-ene-1,2-dione sodium salt were synthesized. Computational analyses of their structures and preliminary antitumor and antiviral screening results are reported., (Copyright © 2016 Elsevier Ltd. All rights reserved.)
- Published
- 2017
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159. Effect of Sibutramine on Plasma C-Reactive Protein, Leptin and Adipon ectin Concentrations: A Systematic Review and Meta-Analysis of Randomized Contr olled Trials.
- Author
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De Vincentis A, Pedone C, Vespasiani-Gentilucci U, Picardi A, Derosa G, Maffioli P, and Sahebkar A
- Subjects
- Anti-Obesity Agents chemistry, Body Mass Index, Body Weight drug effects, Cyclobutanes chemistry, Humans, Randomized Controlled Trials as Topic, Adiponectin blood, Anti-Obesity Agents pharmacology, C-Reactive Protein metabolism, Cyclobutanes pharmacology, Leptin blood
- Abstract
Sibutramine is an anti-obesity medication whose effects on weight loss have been widely explored. Moreover, limited number of studies also evidenced its correlates on adipokines and proinflammatory markers; however, their results have not been conclusive. Hence, a systematic review and meta-analysis of available evidence was conducted in order to calculate the effect size of sibutramine therapy on C-reactive protein (CRP), leptin and adiponectin concentrations. Seven randomized clinical trials with a total of 601 subjects met the eligibility criteria. Random effect meta-analysis evidenced a significant decrease in plasma levels of CRP and leptin (weighted mean difference [WMD] -15.58%, 95% confidence interval [95%CI]: -28.84, -2.33, p=0.021 and WMD -9.25, 95%CI: -15.73, -2.78, p=0.005, respectively) and increase of adiponectin (WMD 9.86%, 95%CI: 1.76, 17.96, p=0.017) following sibutramine therapy. Subgroup analysis showed a greater CRP-lowering effect of sibutramine with doses <15 mg/day (WMD -17.26%, 95%CI: -31.02, -3.5, p=0.014) compared with doses .15 mg/day (WMD 6.01%, 95%CI: -43.38, 55.40, p=0.811). In meta-regression analysis, changes in CRP were found to be independent of baseline or percentage change in body mass index. These results suggest a significant improvement of plasma CRP, leptin and adiponectin levels following treatment with sibutramine. Possible impacts and relevance of these alterations on cardiovascular risk profile remain to be clarified, especially in post-hoc analyses of sibutramine outcome trials among people without pre-existing cardiovascular disease., (Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.)
- Published
- 2017
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160. A retrospective analysis of the efficacy of microparticle-mediated chemoembolization in liver metastases arising from gastrointestinal tumors.
- Author
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Li C, Liu Y, Zhou J, and Zhang YW
- Subjects
- Adult, Aged, Aged, 80 and over, Chemoembolization, Therapeutic adverse effects, Combined Modality Therapy, Cyclobutanes administration & dosage, Cyclobutanes chemistry, Female, Gastrointestinal Neoplasms pathology, Gastrointestinal Neoplasms surgery, Gelatin Sponge, Absorbable administration & dosage, Gelatin Sponge, Absorbable chemistry, Humans, Liver pathology, Liver Neoplasms pathology, Liver Neoplasms secondary, Liver Neoplasms surgery, Male, Middle Aged, Neoplasm Metastasis, Organoplatinum Compounds administration & dosage, Organoplatinum Compounds chemistry, Chemoembolization, Therapeutic methods, Gastrointestinal Neoplasms drug therapy, Liver drug effects, Liver Neoplasms drug therapy
- Abstract
Purpose: We evaluated the clinical efficacy of gelatin sponge microparticle (GSM) -mediated chemoembolization for the treatment of patients with liver metastases following surgery for gastrointestinal tumors., Materials and Methods: In a retrospective analysis of 37 patients who were treated at our hospital with GSM-mediated chemoembolization for liver metastases over 13 years, we evaluated outcomes using a modified response evaluation criteria in solid tumors system and also assessed liver function and adverse effects. All patients had previously undergone surgery for gastrointestinal tumors., Results: Treatment produced various degrees of necrosis and shrinkage of lesions among our patients. Two patients achieved a complete response (CR), 27 showed a partial response (PR), five had stable disease, and three had progressive disease. The overall response rate (CR + PR) was 78%, and no severe adverse effects were observed., Conclusion: GSM-mediated chemoembolization showed good clinical efficacy in the treatment of liver metastases after gastrointestinal tumor surgery. However, larger cohort and clinical controlled studies are warranted.
- Published
- 2017
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161. Nickel-Catalyzed Chemo- and Enantioselective Coupling between Cyclobutanones and Allenes: Rapid Synthesis of [3.2.2] Bicycles.
- Author
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Zhou X and Dong G
- Subjects
- Bridged Bicyclo Compounds chemistry, Catalysis, Molecular Structure, Stereoisomerism, Alkadienes chemistry, Bridged Bicyclo Compounds chemical synthesis, Cyclobutanes chemistry, Nickel chemistry, Organometallic Compounds chemistry
- Abstract
Herein an intramolecular nickel-catalyzed (4+2) coupling between cyclobutanones and allenes, by C-C cleavage, is reported. The reaction provides a distinct approach for accessing [3.2.2] bicyclic scaffolds which are challenging to prepare through conventional approaches. The reaction is efficient, chemoselective, and pH/redox neutral. Room temperature conditions and low catalyst loadings can be adopted. Excellent enantioselectivity is also achieved., (© 2016 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2016
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162. Cyclobutenes: At a Crossroad between Diastereoselective Syntheses of Dienes and Unique Palladium-Catalyzed Asymmetric Allylic Substitutions.
- Author
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Misale A, Niyomchon S, and Maulide N
- Subjects
- Alkylation, Bridged Bicyclo Compounds, Heterocyclic chemistry, Catalysis, Coordination Complexes chemistry, Lactones chemistry, Ligands, Stereoisomerism, Zinc chemistry, Alkadienes chemical synthesis, Cyclobutanes chemical synthesis, Cyclobutanes chemistry, Palladium chemistry
- Abstract
The rich chemistry of cyclobutanes is underpinned by a large body of synthetic literature devoted to their synthesis and decoration. This is motivated by the widespread representation of cyclobutane moieties in biologically active natural products and man-made molecules. Surprisingly, this vast array of knowledge finds no parallel in the chemistry of cyclobutenes, their unsaturated analogues. In particular, a dearth of methods to synthesize enantioenriched cyclobutenes is apparent upon cursory investigation of the literature. As a leading example, the photocycloaddition of maleic anhydride to acetylene or dichloroethylene, probably a benchmark of cyclobutene synthesis, delivers a meso cyclic anhydride which can be further converted to a cyclobutene product by enantioselective desymmetrization by ring opening. Nonetheless, such an approach delivers products with a rather inflexible substitution pattern around the four-membered ring. The lack of general approaches has motivated our group and others to develop novel routes to cyclobutene scaffolds, leading to the development of a strategy that combines photochemistry and catalysis. Indeed, we have coupled the simple and efficient photochemical isomerization of 2-pyrone into a strained bicyclo[2.2.0] lactone with palladium-catalyzed allylic alkylation as a simple and versatile access to functionalized cyclobutenes. Several nucleophiles can be added to the activated, strained intermediate, including malonate anions and azlactones. The products are mono- and bicyclic building blocks richly decorated with functional groups. Importantly, they are formed with high levels of diastereoselectivity as expected by the tenets of palladium-catalyzed allylic alkylation, which posit that the oxidative addition and nucleophilic capture steps proceed with inversion of configuration, resulting in overall retention (inversion + inversion). However, the transposition of the methodology to an asymmetric version subsequently led to the surprising discovery of a family of highly enantioselective, diastereodivergent catalytic processes. Indeed, we observed a ligand-dependent stereochemical outcome for a range of palladium-catalyzed allylic alkylations affording either overall retention or overall inversion of configuration, and that with very high levels of enantio- and diastereoselectivity. The new family of diastereodivergent reactions enables the conversion of the aforementioned racemic bicyclo[2.2.0] lactone into each of 4 stereoisomeric products, at will. Although the mechanistic details at the origin of this unusual stereodivergence are not yet fully elucidated, it became clear through our studies that unique Pd-allyl complexes, residing preferentially as their σ-(monohapto)-bound isomers, are at the heart of the process. The cyclobutenes prepared can also engage in electrocyclic ring-opening reactions (often spontaneous depending on the substitution pattern) that link this chemistry with that of diene and polyene frameworks. Using the strategies laid out above, our group was then able to harness the high stereospecificity of electrocyclic reactions and design modular syntheses of several natural products and natural product fragments. We believe that the methods presented herein shall soon pave the way for the streamlined synthesis of more complex polyenic natural products.
- Published
- 2016
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163. Quantum Mechanics/Molecular Mechanics Free Energy Maps and Nonadiabatic Simulations for a Photochemical Reaction in DNA: Cyclobutane Thymine Dimer.
- Author
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Mendieta-Moreno JI, Trabada DG, Mendieta J, Lewis JP, Gómez-Puertas P, and Ortega J
- Subjects
- Molecular Dynamics Simulation, Photochemical Processes, Cyclobutanes chemistry, Pyrimidine Dimers chemistry, Quantum Theory
- Abstract
The absorption of ultraviolet radiation by DNA may result in harmful genetic lesions that affect DNA replication and transcription, ultimately causing mutations, cancer, and/or cell death. We analyze the most abundant photochemical reaction in DNA, the cyclobutane thymine dimer, using hybrid quantum mechanics/molecular mechanics (QM/MM) techniques and QM/MM nonadiabatic molecular dynamics. We find that, due to its double helix structure, DNA presents a free energy barrier between nonreactive and reactive conformations leading to the photolesion. Moreover, our nonadiabatic simulations show that most of the photoexcited reactive conformations return to standard B-DNA conformations after an ultrafast nonradiative decay to the ground state. This work highlights the importance of dynamical effects (free energy, excited-state dynamics) for the study of photochemical reactions in biological systems.
- Published
- 2016
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164. Sex Pheromone of the Cotton Mealybug, Phenacoccus solenopsis, with an Unusual Cyclobutane Structure.
- Author
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Tabata J and Ichiki RT
- Subjects
- Animals, Cyclobutanes pharmacology, Female, Hemiptera drug effects, Male, Sex Attractants pharmacology, Stereoisomerism, Cyclobutanes chemistry, Hemiptera chemistry, Sex Attractants chemistry
- Abstract
The cotton mealybug, Phenacoccus solenopsis, the distribution of which was formerly limited to Nearctic and Neotropical regions, recently invaded many countries in various regions including Asia, Africa, and the Pacific. More recently, P. solenopsis was newly recorded in Japan and is currently an emerging pest of agricultural crops. In this study, we determined the structure of a sex pheromone of P. solenopsis in order to develop an effective lure for monitoring this pest. From volatiles emitted by virgin adult females, we isolated a compound attractive to males. By means of coupled gas chromatography-mass spectrometry and nuclear magnetic resonance spectroscopy, we identified this as (2,2-dimethyl-3-isopropylidenecyclobutyl)methyl 3-methylbut-2-enoate. This compound was synthesized and shown to be attractive to male P. solenopsis. Analysis by gas chromatography using an enantioselective stationary phase and polarimetry analyses of the natural pheromone and synthetic enantiomers showed the natural compound to be the (R)-(-)-enantiomer. This compound is an ester of maconelliol, which has an unusual cyclobutane structure found in sex pheromones of other mealybug species, and senecioic acid, also found in the pheromones of other mealybug species. However, this is the first example of the ester of maconelliol and senecioic acid as a natural product.
- Published
- 2016
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165. Synthesis of Bridged Cyclopentane Derivatives by Catalytic Decarbonylative Cycloaddition of Cyclobutanones and Olefins.
- Author
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Zhou X, Ko HM, and Dong G
- Subjects
- Bridged-Ring Compounds chemistry, Catalysis, Cycloaddition Reaction, Cyclopentanes chemistry, Molecular Structure, Alkenes chemistry, Bridged-Ring Compounds chemical synthesis, Cyclobutanes chemistry, Cyclopentanes chemical synthesis
- Abstract
Herein, we report an intramolecular rhodium-catalyzed decarbonylative coupling between cyclobutanones and alkenes that proceeds by C-C activation and provides a distinct approach to a diverse range of saturated bridged cyclopentane derivatives. In this reaction, cyclobutanones serve as cyclopropane surrogates, reacting in a formal (4+2-1) transformation. To demonstrate the efficacy of this method, it was applied in a concise synthesis of the antifungal drug Tolciclate., (© 2016 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2016
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166. An α-Helix-Mimicking 12,13-Helix: Designed α/β/γ-Foldamers as Selective Inhibitors of Protein-Protein Interactions.
- Author
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Grison CM, Miles JA, Robin S, Wilson AJ, and Aitken DJ
- Subjects
- Carboxylic Acids chemistry, Cyclobutanes chemistry, Humans, Protein Binding drug effects, Protein Conformation, alpha-Helical drug effects, RNA-Binding Proteins chemistry, Tumor Suppressor Protein p53 chemistry, Carboxylic Acids pharmacology, Cyclobutanes pharmacology, RNA-Binding Proteins metabolism, Tumor Suppressor Protein p53 metabolism
- Abstract
A major current challenge in bioorganic chemistry is the identification of effective mimics of protein secondary structures that act as inhibitors of protein-protein interactions (PPIs). In this work, trans-2-aminocyclobutanecarboxylic acid (tACBC) was used as the key β-amino acid component in the design of α/β/γ-peptides to structurally mimic a native α-helix. Suitably functionalized α/β/γ-peptides assume an α-helix-mimicking 12,13-helix conformation in solution, exhibit enhanced proteolytic stability in comparison to the wild-type α-peptide parent sequence from which they are derived, and act as selective inhibitors of the p53/hDM2 interaction., (© 2016 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA.)
- Published
- 2016
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167. Photoelectrical Stimulation of Neuronal Cells by an Organic Semiconductor-Electrolyte Interface.
- Author
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Abdullaeva OS, Schulz M, Balzer F, Parisi J, Lützen A, Dedek K, and Schiek M
- Subjects
- Aniline Compounds chemistry, Animals, Cell Line, Tumor, Cell Survival, Cyclobutanes chemistry, Electric Stimulation, Fullerenes chemistry, Mice, Neurons cytology, Phenols chemistry, Electrolytes chemistry, Light, Membrane Potentials, Neurons metabolism, Semiconductors
- Abstract
As a step toward the realization of neuroprosthetics for vision restoration, we follow an electrophysiological patch-clamp approach to study the fundamental photoelectrical stimulation mechanism of neuronal model cells by an organic semiconductor-electrolyte interface. Our photoactive layer consisting of an anilino-squaraine donor blended with a fullerene acceptor is supporting the growth of the neuronal model cell line (N2A cells) without an adhesion layer on it and is not impairing cell viability. The transient photocurrent signal upon illumination from the semiconductor-electrolyte layer is able to trigger a passive response of the neuronal cells under physiological conditions via a capacitive coupling mechanism. We study the dynamics of the capacitive transmembrane currents by patch-clamp recordings and compare them to the dynamics of the photocurrent signal and its spectral responsivity. Furthermore, we characterize the morphology of the semiconductor-electrolyte interface by atomic force microscopy and study the stability of the interface in dark and under illuminated conditions.
- Published
- 2016
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168. Enantioselective Total Synthesis of (+)-Psiguadial B.
- Author
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Chapman LM, Beck JC, Wu L, and Reisman SE
- Subjects
- Alkanes chemistry, Biological Products, Catalysis, Chemistry, Pharmaceutical, Cyclization, Cyclobutanes chemistry, Medicine, Chinese Traditional, Molecular Structure, Psidium, Stereoisomerism, Terpenes chemistry, Drug Design, Terpenes chemical synthesis
- Abstract
The first enantioselective total synthesis of the cytotoxic natural product (+)-psiguadial B is reported. Key features of the synthesis include (1) the enantioselective preparation of a key cyclobutane intermediate by a tandem Wolff rearrangement/asymmetric ketene addition, (2) a directed C(sp(3))-H alkenylation reaction to strategically forge the C1-C2 bond, and (3) a ring-closing metathesis to build the bridging bicyclo[4.3.1]decane terpene framework.
- Published
- 2016
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169. Ultra-low fouling and high antibody loading zwitterionic hydrogel coatings for sensing and detection in complex media.
- Author
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Chou YN, Sun F, Hung HC, Jain P, Sinclair A, Zhang P, Bai T, Chang Y, Wen TC, Yu Q, and Jiang S
- Subjects
- Humans, Amino Acids, Cyclic chemistry, Antibodies chemistry, Biosensing Techniques methods, Coated Materials, Biocompatible chemistry, Cyclobutanes chemistry, Hydrogels chemistry, Membranes, Artificial
- Abstract
Unlabelled: For surface-based diagnostic devices to achieve reliable biomarker detection in complex media such as blood, preventing nonspecific protein adsorption and incorporating high loading of biorecognition elements are paramount. In this work, a novel method to produce nonfouling zwitterionic hydrogel coatings was developed to achieve these goals. Poly(carboxybetaine acrylamide) (pCBAA) hydrogel thin films (CBHTFs) prepared with a carboxybetaine diacrylamide crosslinker (CBAAX) were coated on gold and silicon dioxide surfaces via a simple spin coating process. The thickness of CBHTFs could be precisely controlled between 15 and 150nm by varying the crosslinker concentration, and the films demonstrated excellent long-term stability. Protein adsorption from undiluted human blood serum onto the CBHTFs was measured with surface plasmon resonance (SPR). Hydrogel thin films greater than 20nm exhibited ultra-low fouling (<5ng/cm(2)). In addition, the CBHTFs were capable of high antibody functionalization for specific biomarker detection without compromising their nonfouling performance. This strategy provides a facile method to modify SPR biosensor chips with an advanced nonfouling material, and can be potentially expanded to a variety of implantable medical devices and diagnostic biosensors., Statement of Significance: In this work, we developed an approach to realize ultra-low fouling and high ligand loading with a highly-crosslinked, purely zwitterionic, carboxybetaine thin film hydrogel (CBHTF) coating platform. The CBHTF on a hydrophilic surface demonstrated long-term stability. By varying the crosslinker content in the spin-coated hydrogel solution, the thickness of CBHTFs could be precisely controlled. Optimized CBHTFs exhibited ultra-low nonspecific protein adsorption below 5ng/cm(2) measured by a surface plasmon resonance (SPR) sensor, and their 3D architecture allowed antibody loading to reach 693ng/cm(2). This strategy provides a facile method to modify SPR biosensor chips with an advanced nonfouling material, and can be potentially expanded to a variety of implantable medical devices and diagnostic biosensors., (Copyright © 2016 Acta Materialia Inc. Published by Elsevier Ltd. All rights reserved.)
- Published
- 2016
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170. Emergence of diversity and stereochemical outcomes in the biosynthetic pathways of cyclobutane-centered marine alkaloid dimers.
- Author
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Beniddir MA, Evanno L, Joseph D, Skiredj A, and Poupon E
- Subjects
- Biosynthetic Pathways, Molecular Structure, Biological Products chemistry, Cyclobutanes chemistry, Indole Alkaloids chemistry, Marine Biology, Pyrroles chemistry
- Abstract
Covering: up to 2016Dictazoles and sceptrins are singular metabolites of marine origin. The present dichotomic case study provides a comprehensive perspective on these cyclobutane-centered alkaloids and their respective families. Indeed, their upstream and downstream chemistry are both treated herein. Relevant isolation reports and bio-inspired total syntheses are used to decipher the currently admitted biosynthetic hypotheses as well as the emergence of diversity in the two series. This review proposes a transversal vision of the topic, where most aspects of natural product chemistry have a critical importance.
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- 2016
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171. Recent Development of Chemosensors Based on Cyanine Platforms.
- Author
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Sun W, Guo S, Hu C, Fan J, and Peng X
- Subjects
- Animals, Biosensing Techniques methods, Humans, Carbocyanines chemistry, Cyclobutanes chemistry, Fluorescent Dyes chemistry, Indoles chemistry, Phenols chemistry
- Abstract
The cyanine platforms including cyanine, hemicyanine, and squaraine are good candidates for developing chemosensors because of their excellent photophysical properties, outstanding biocompatibility, and low toxicity to living systems. A huge amount of research work involving chemosensors based on the cyanine platforms has emerged in recent years. This review focuses on the development from 2000 to 2015, in which cyanine, hemicyanine, and squaraine sensors will be separately summarized. In each section, a systematization according to the type of detection mechanism is established. The basic principles about the design of the chemosensors and their applications as bioimaging agents are clearly discussed. In addition, we emphasize the advances that have been made in improving the detection performance through incorporation of the chemosensors into nanoparticles.
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- 2016
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172. Chiral Cyclobutane β-Amino Acid-Based Amphiphiles: Influence of Cis/Trans Stereochemistry on Condensed Phase and Monolayer Structure.
- Author
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Sorrenti A, Illa O, Ortuño RM, and Pons R
- Subjects
- Molecular Structure, Stereoisomerism, Amino Acids chemistry, Cyclobutanes chemistry, Models, Molecular, Surface-Active Agents chemistry
- Abstract
New diastereomeric nonionic amphiphiles, cis- and trans-1, based on an optically pure cyclobutane β-amino ester moiety have been investigated to gain insight into the influence exerted by cis/trans stereochemistry and stereochemical constraints on the physicochemical behavior, molecular organization, and morphology of their Langmuir monolayers and dry solid states. All these features are relevant to the rational design of functional materials. trans-1 showed a higher thermal stability than cis-1. For the latter, a higher fluidity of its monolayers was observed when compared with the films formed by trans-1 whose BAM images revealed the formation of condensed phase domains with a dendritic shape, which are chiral, and all of them feature the same chiral sign. Although the formation of LC phase domains was not observed by BAM for cis-1, compact dendritic crystals floating on a fluid subphase were observed beyond the collapse, which are attributable to multilayered 3D structures. These differences can be explained by the formation of hydrogen bonds between the amide groups of consecutive molecules allowing the formation of extended chains for trans-1 giving ordered arrangements. However, for cis-1, this alignment coexists with another one that allows the simultaneous formation of two hydrogen bonds between the amide and the ester groups of adjacent molecules. In addition, the propensity to form intramolecular hydrogen bonds must be considered to justify the formation of different patterns of hydrogen bonding and, consequently, the formation of less ordered phases. Those characteristics are congruent also with the results obtained from SAXS-WAXS experiments which suggest a more bent configuration for cis-1 than for trans-1.
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- 2016
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173. Production of the Fusarium Mycotoxin Moniliformin by Penicillium melanoconidium.
- Author
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Hallas-Møller M, Nielsen KF, and Frisvad JC
- Subjects
- Chromatography, High Pressure Liquid, Cyclobutanes chemistry, Edible Grain microbiology, Food Contamination analysis, Mycotoxins chemistry, Penicillium chemistry, Tandem Mass Spectrometry, Cyclobutanes metabolism, Fusarium metabolism, Mycotoxins metabolism, Penicillium metabolism
- Abstract
Moniliformin is a mycotoxin produced by several cereal associated Fusaria. Here, we show for the first time that moniliformin can be produced by the cereal fungus, Penicillium melanoconidium (4 out of 4 strains), but not in the related species in the Viridicata series. Moniliformin was detected in 10 out of 11 media: two agars and several cereal and bean types. Moniliformin was identified by a novel mixed-mode anionic exchange reversed phase chromatographic method which was coupled to both tandem mass spectrometry (MS) and high resolution MS. Mixed-mode chromatography showed superior peak shape compared to that of HILIC and less matrix interference compared to that of reversed phase chromatography, but during a large series of analyses, the column was fouled by matrix interferences. Wheat and beans were artificially infected by P. melanoconidium containing up to 64 and 11 mg/kg moniliformin, respectively, while penicillic acid, roquefortine C, and penitrem A levels in wheat were up to 1095, 38, and 119 mg/kg, respectively.
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- 2016
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174. Synthesis and Pharmacology of (Pyridin-2-yl)methanol Derivatives as Novel and Selective Transient Receptor Potential Vanilloid 3 Antagonists.
- Author
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Gomtsyan A, Schmidt RG, Bayburt EK, Gfesser GA, Voight EA, Daanen JF, Schmidt DL, Cowart MD, Liu H, Altenbach RJ, Kort ME, Clapham B, Cox PB, Shrestha A, Henry R, Whittern DN, Reilly RM, Puttfarcken PS, Brederson JD, Song P, Li B, Huang SM, McDonald HA, Neelands TR, McGaraughty SP, Gauvin DM, Joshi SK, Banfor PN, Segreti JA, Shebley M, Faltynek CR, Dart MJ, and Kym PR
- Subjects
- Calcium metabolism, Cyclobutanes chemistry, Dose-Response Relationship, Drug, HEK293 Cells, Humans, Molecular Conformation, Pyridines chemistry, Structure-Activity Relationship, TRPV Cation Channels metabolism, Cyclobutanes chemical synthesis, Cyclobutanes pharmacology, Pyridines chemical synthesis, Pyridines pharmacology, TRPV Cation Channels antagonists & inhibitors
- Abstract
Transient receptor potential vanilloid 3 (TRPV3) is a Ca(2+)- and Na(+)-permeable channel with a unique expression pattern. TRPV3 is found in both neuronal and non-neuronal tissues, including dorsal root ganglia, spinal cord, and keratinocytes. Recent studies suggest that TRPV3 may play a role in inflammation, pain sensation, and skin disorders. TRPV3 studies have been challenging, in part due to a lack of research tools such as selective antagonists. Herein, we provide the first detailed report on the development of potent and selective TRPV3 antagonists featuring a pyridinyl methanol moiety. Systematic optimization of pharmacological, physicochemical, and ADME properties of original lead 5a resulted in identification of a novel and selective TRPV3 antagonist 74a, which demonstrated a favorable preclinical profile in two different models of neuropathic pain as well as in a reserpine model of central pain.
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- 2016
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175. Design, Synthesis, and Biological Evaluations of Hydroxypyridonecarboxylic Acids as Inhibitors of HIV Reverse Transcriptase Associated RNase H.
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Kankanala J, Kirby KA, Liu F, Miller L, Nagy E, Wilson DJ, Parniak MA, Sarafianos SG, and Wang Z
- Subjects
- Cyclobutanes chemical synthesis, Cyclobutanes chemistry, Dose-Response Relationship, Drug, Humans, Molecular Docking Simulation, Molecular Structure, Pyridines chemical synthesis, Pyridines chemistry, Reverse Transcriptase Inhibitors chemical synthesis, Reverse Transcriptase Inhibitors chemistry, Structure-Activity Relationship, Cyclobutanes pharmacology, Drug Design, HIV Reverse Transcriptase antagonists & inhibitors, Pyridines pharmacology, Reverse Transcriptase Inhibitors pharmacology, Ribonuclease H, Human Immunodeficiency Virus antagonists & inhibitors
- Abstract
Targeting the clinically unvalidated reverse transcriptase (RT) associated ribonuclease H (RNase H) for human immunodeficiency virus (HIV) drug discovery generally entails chemotypes capable of chelating two divalent metal ions in the RNase H active site. The hydroxypyridonecarboxylic acid scaffold has been implicated in inhibiting homologous HIV integrase (IN) and influenza endonuclease via metal chelation. We report herein the design, synthesis, and biological evaluations of a novel variant of the hydroxypyridonecarboxylic acid scaffold featuring a crucial N-1 benzyl or biarylmethyl moiety. Biochemical studies show that most analogues consistently inhibited HIV RT-associated RNase H in the low micromolar range in the absence of significant inhibition of RT polymerase or IN. One compound showed reasonable cell-based antiviral activity (EC50 = 10 μM). Docking and crystallographic studies corroborate favorable binding to the active site of HIV RNase H, providing a basis for the design of more potent analogues.
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- 2016
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176. A novel platform self-assembled from squaraine-embedded Zn(ii) complexes for selective monitoring of ATP and its level fluctuation in mitotic cells.
- Author
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Feng R, Xu Y, Zhao H, Duan X, and Sun S
- Subjects
- Cell Line, Tumor, Humans, Adenosine Triphosphate analysis, Cyclobutanes chemistry, Mitosis, Phenols chemistry, Zinc chemistry
- Abstract
Using multiple interactions, a simple self-assembly based on a Zn(ii) coordination compound and squaraine () demonstrated a selective turn-on fluorescence response to ATP in the near infrared (NIR) region. More importantly, the self-assembly has been successfully applied to ATP imaging in the mitochondria of the gastric cancer cell line SGC-7901 and monitoring of level fluctuation of ATP during the mitotic period.
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- 2016
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177. Self-Assembled ROS-Sensitive Polymer-Peptide Therapeutics Incorporating Built-in Reporters for Evaluation of Treatment Efficacy.
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Qiao ZY, Zhao WJ, Cong Y, Zhang D, Hu Z, Duan ZY, and Wang H
- Subjects
- Apoptosis drug effects, Drug Carriers chemistry, Drug Delivery Systems, Humans, Micelles, Nanoparticles administration & dosage, Nanoparticles chemistry, Oxidative Stress drug effects, Peptide Fragments chemistry, Polyethylene Glycols chemistry, Polymers chemistry, Treatment Outcome, Cyclobutanes chemistry, Neoplasms drug therapy, Peptide Fragments therapeutic use, Phenols chemistry, Polymers therapeutic use, Reactive Oxygen Species metabolism
- Abstract
One of the major challenges in current cancer therapy is to maximize therapeutic effect and evaluate tumor progression under the scheduled treatment protocol. To address these challenges, we synthesized the cytotoxic peptide (KLAKLAK)2 (named KLAK) conjugated amphiphilic poly(β-thioester)s copolymers (H-P-K) composed of reactive oxygen species (ROS) sensitive backbones and hydrophilic polyethylene glycol (PEG) side chains. H-P-K could self-assemble into micelle-like nanoparticles by hydrophobic interaction with copolymer backbones as cores and PEG and KLAK as shells. The assembled polymer-peptide nanoparticles remarkably improved cellular internalization and accumulation of therapeutic KLAK in cells. Compared to free KLAK peptide, the antitumor activity of H-P-K was significantly enhanced up to ∼400 times, suggesting the effectiveness of the nanoscaled polymer-peptide conjugation as biopharmaceuticals. The higher antitumor activity of nanoparticles was attributed to the efficient disruption of mitochondrial membranes and subsequent excessive ROS production in cells. To realize the ROS monitoring and treatment evaluation, we encapsulated squaraine (SQ) dyes as built-in reporters in ROS-sensitive H-P-K micelles. The overgenerated ROS around mitochondria stimulated the swelling of nanoparticles and subsequent release of SQ, which formed H-aggregates and significantly increased the photoacoustic (PA) signal. We believed that this self-assembled polymer-peptide nanotherapeutics incorporating built-in reporters has great potential for high antitumor performance and in situ treatment evaluation.
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- 2016
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178. Squaraines bearing halogenated moieties as anticancer photosensitizers: Synthesis, characterization and biological evaluation.
- Author
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Serpe L, Ellena S, Barbero N, Foglietta F, Prandini F, Gallo MP, Levi R, Barolo C, Canaparo R, and Visentin S
- Subjects
- Antineoplastic Agents chemical synthesis, Antineoplastic Agents chemistry, Cell Death drug effects, Cell Proliferation drug effects, Cyclobutanes chemical synthesis, Cyclobutanes chemistry, Dose-Response Relationship, Drug, Drug Screening Assays, Antitumor, Humans, Models, Molecular, Molecular Structure, Phenols chemical synthesis, Phenols chemistry, Photosensitizing Agents chemical synthesis, Photosensitizing Agents chemistry, Reactive Oxygen Species metabolism, Structure-Activity Relationship, Tumor Cells, Cultured, Antineoplastic Agents pharmacology, Cyclobutanes pharmacology, Halogens chemistry, Phenols pharmacology, Photosensitizing Agents pharmacology
- Abstract
We report the synthesis and characterization of a series of symmetrical indolenine-based squaraine dyes along with the evaluation of their singlet oxygen generation efficiency. The photodynamic activity of these new photosensitizers has been evaluated on a human tumor fibrosarcoma (HT-1080) cell line. The cytotoxicity increased over time and is induced by the photoactivation of bromo (Br-C4) and iodio (I-C4) long carbon chain squaraine dyes and the consequent increase in reactive oxygen species (ROS) production (p < 0.001), which leads to necrosis 6 h after treatment. Induction of cytochrome c release, DNA damage and up-regulation of GPX1, NQO1 and SOD2 mRNA gene expression after PDT were investigated., (Copyright © 2016 Elsevier Masson SAS. All rights reserved.)
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- 2016
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179. Blocking cyclobutane pyrimidine dimer formation by steric hindrance.
- Author
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Vendrell-Criado V, Lhiaubet-Vallet V, Yamaji M, Cuquerella MC, and Miranda MA
- Subjects
- Acetone chemistry, Benzophenones chemistry, Dimerization, Lasers, Molecular Structure, Photolysis, Photosensitizing Agents chemistry, Pyrimidine Dimers chemical synthesis, Ultraviolet Rays, Uracil analogs & derivatives, Uracil chemistry, Cyclobutanes chemistry, Pyrimidine Dimers chemistry
- Abstract
The efficiency of thymine (Thy) and uracil (Ura) to form cyclobutane pyrimidine dimers (CPDs) in solution, upon UV irradiation differs by one order of magnitude. This could to be partially related to the steric hindrance induced by the methyl at C5 in thymine. The aim of the present work is to establish the influence of a bulky moiety at this position on the photoreactivity of pyrimidines. With this purpose, photosensitization with benzophenone and acetone of a 5-tert-butyl uracil derivative () and the equivalent Thy () has been compared. Introduction of the tert-butyl group completely blocks CPD formation. Moreover, the mechanistic insight obtained by laser flash photolysis is in accordance with the observed photoreactivity.
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- 2016
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180. Optical Absorption Spectra and Electronic Properties of Symmetric and Asymmetric Squaraine Dyes for Use in DSSC Solar Cells: DFT and TD-DFT Studies.
- Author
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El-Shishtawy RM, Elroby SA, Asiri AM, and Müllen K
- Subjects
- Electric Power Supplies, Electrons, Models, Molecular, Quantum Theory, Solar Energy, Spectrophotometry, Ultraviolet, Coloring Agents chemistry, Cyclobutanes chemistry, Phenols chemistry
- Abstract
The electronic absorption spectra, ground-state geometries and electronic structures of symmetric and asymmetric squaraine dyes (SQD1-SQD4) were investigated using density functional theory (DFT) and time-dependent (TD-DFT) density functional theory at the B3LYP/6-311++G** level. The calculated ground-state geometries reveal pronounced conjugation in these dyes. Long-range corrected time dependent density functionals Perdew, Burke and Ernzerhof (PBE, PBE1PBE (PBE0)), and the exchange functional of Tao, Perdew, Staroverov, and Scuseria (TPSSh) with 6-311++G** basis set were employed to examine optical absorption properties. In an extensive comparison between the optical data and DFT benchmark calculations, the BEP functional with 6-311++G** basis set was found to be the most appropriate in describing the electronic absorption spectra. The calculated energy values of lowest unoccupied molecular orbitals (LUMO) were 3.41, 3.19, 3.38 and 3.23 eV for SQD1, SQD2, SQD3, and SQD4, respectively. These values lie above the LUMO energy (-4.26 eV) of the conduction band of TiO₂ nanoparticles indicating possible electron injection from the excited dyes to the conduction band of the TiO₂ in dye-sensitized solar cells (DSSCs). Also, aromaticity computation for these dyes are in good agreement with the data obtained optically and geometrically with SQD4 as the highest aromatic structure. Based on the optimized molecular geometries, relative positions of the frontier orbitals, and the absorption maxima, we propose that these dyes are suitable components of photovoltaic DSSC devices.
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- 2016
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181. Solid-state polymerisation via [2+2] cycloaddition reaction involving coordination polymers.
- Author
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Medishetty R, Park IH, Lee SS, and Vittal JJ
- Subjects
- Coordination Complexes chemical synthesis, Crystallography, X-Ray, Cycloaddition Reaction, Ligands, Molecular Structure, Polymerization, Solid-Phase Synthesis Techniques, Coordination Complexes chemistry, Cyclobutanes chemistry, Polymers chemistry
- Abstract
Highly crystalline metal ions containing organic polymers are potentially useful to manipulate the magnetic and optical properties to make advanced multifunctional materials. However, it is challenging to synthesise monocrystalline metal complexes of organic polymers and single-phase hybrid materials made up of both coordination and organic polymers by traditional solution crystallisation. This requires an entirely different approach in the solid-state by thermal or photo polymerisation of the ligands. Among the photochemical methods available, [2+2] cycloaddition reaction has been recently employed to generate cyclobutane based coordination polymers from the metal complexes. Cyclobutane polymers have also been integrated into coordination polymers in this way. Recent advancements in the construction of polymeric chains of cyclobutane rings through photo-dimerisation reaction in the monocrystalline solids containing metal complexes, coordination polymers and metal-organic framework structures are discussed here.
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- 2016
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182. Pushing the limits of catalytic C-H amination in polyoxygenated cyclobutanes.
- Author
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Nocquet PA, Hensienne R, Wencel-Delord J, Laigre E, Sidelarbi K, Becq F, Norez C, Hazelard D, and Compain P
- Subjects
- Amination, Catalysis, Molecular Structure, Spiro Compounds chemistry, Cyclobutanes chemistry, Rhodium chemistry, Spiro Compounds chemical synthesis
- Abstract
A synthetic route to a new class of conformationally constrained iminosugars based on a 5-azaspiro[3.4]octane skeleton has been developed by way of Rh(ii)-catalyzed C(sp(3))-H amination. The pivotal stereocontrolled formation of the quaternary C-N bond by insertion into the C-H bonds of the cyclobutane ring was explored with a series of polyoxygenated substrates. In addition to anticipated regioselective issues induced by the high density of activated α-ethereal C-H bonds, this systematic study showed that cyclobutane C-H bonds were, in general, poorly reactive towards catalytic C-H amination. This was demonstrated inter alia by the unexpected formation of a oxathiazonane derivative, which constitutes a very rare example of the formation of a 9-membered ring by way of catalyzed C(sp(3))-H amination. A complete stereocontrol could be however achieved by activating the key insertion position as an allylic C-H bond in combination with reducing the electron density at the undesired C-H insertion sites by using electron-withdrawing protecting groups. Preliminary biological evaluations of the synthesized spiro-iminosugars were performed, which led to the identification of a new class of correctors of the defective F508del-CFTR gating involved in cystic fibrosis.
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- 2016
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183. Collagen/elastin hydrogels cross-linked by squaric acid.
- Author
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Skopinska-Wisniewska J, Kuderko J, Bajek A, Maj M, Sionkowska A, and Ziegler-Borowska M
- Subjects
- Cross-Linking Reagents chemistry, Biocompatible Materials chemistry, Collagen chemistry, Cyclobutanes chemistry, Elastin chemistry, Hydrogels chemistry
- Abstract
Hydrogels based on collagen and elastin are very valuable materials for medicine and tissue engineering. They are biocompatible; however their mechanical properties and resistance for enzymatic degradation need to be improved by cross-linking. Up to this point many reagents have been tested but more secure reactants are still sought. Squaric acid (SqAc), 3,4-dihydroxy 3-cyclobutene 1,2-dione, is a strong, cyclic acid, which reacts easily with amine groups. The properties of hydrogels based on collagen/elastin mixtures (95/5, 90/10) containing 5%, 10% and 20% of SqAc and neutralized via dialysis against deionized water were tested. Cross-linked, 3-D, transparent hydrogels were created. The cross-linked materials are stiffer and more resistant to enzymatic degradation than those that are unmodified. The pore size, swelling ability and surface polarity are reduced due to 5% and 10% of SqAc addition. At the same time, the cellular response is not significantly affected by the cross-linking. Therefore, squaric acid would be regarded as a safe, effective cross-linking agent., (Copyright © 2015 Elsevier B.V. All rights reserved.)
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- 2016
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184. Characterization of a Squaraine/Chitosan System for Photodynamic Therapy of Cancer.
- Author
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Ferreira DP, Conceição DS, Fernandes F, Sousa T, Calhelha RC, Ferreira IC, Santos PF, and Vieira Ferreira LF
- Subjects
- Adsorption, Cell Survival drug effects, Cell Survival radiation effects, Cervix Uteri drug effects, Cervix Uteri radiation effects, Coloring Agents administration & dosage, Coloring Agents chemistry, Coloring Agents pharmacokinetics, Cyclobutanes administration & dosage, Cyclobutanes chemistry, Cyclobutanes pharmacokinetics, Female, Fluorescence, HeLa Cells, Humans, Light, Phenols administration & dosage, Phenols chemistry, Phenols pharmacokinetics, Photochemotherapy, Photolysis, Photosensitizing Agents administration & dosage, Photosensitizing Agents chemistry, Photosensitizing Agents pharmacokinetics, Ultraviolet Rays, Chitosan chemistry, Coloring Agents pharmacology, Cyclobutanes pharmacology, Drug Carriers chemistry, Phenols pharmacology, Photosensitizing Agents pharmacology, Uterine Cervical Neoplasms drug therapy
- Abstract
In this work, a squaraine dye CS5 was characterized and evaluated for its potential in photodynamic therapy. The studies were performed in ethanol and also in a powdered biopolymer, in this case chitosan. Ground state absorption, absolute fluorescence quantum yields, fluorescence lifetimes, and transient absorption were determined in order to evaluate the advantage of adsorbing the dye onto a biopolymer. Several concentrations of the dye, adsorbed onto chitosan, were prepared in order to evaluate the concentration effect on the photophysical parameters under study. A remarkable increase in the fluorescence quantum yield and lifetimes was detected when compared with the dye in solution. Also, a very clear dependence of the fluorescence quantum yield on the concentration range was found. A lifetime distribution analysis of these systems fluorescence evidenced the entrapment of the dye onto the chitosan environment with a monoexponential decay which corresponds to the monomer emission in slightly different environments. The transient absorption spectrum was obtained without sensitization indicating the existence of a triplet state which takes special importance in the generation of phototoxic species namely singlet oxygen. The subcellular localization of a photosensitizer is critical for efficient photoinduced cell death, in this way, colocalization studies were performed within HeLa cell line (human cervical carcinoma) through confocal microscopy. Toxicity in the dark and phototoxicity of CS5 were also evaluated for the same cellular model.
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- 2016
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185. Diverse Natural Products from Dichlorocyclobutanones: An Evolutionary Tale.
- Author
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Deprés JP, Delair P, Poisson JF, Kanazawa A, and Greene AE
- Subjects
- 4-Butyrolactone chemical synthesis, Cyclobutanes chemical synthesis, Cyclopentanes chemical synthesis, Diazomethane chemistry, Pyrrolidinones chemical synthesis, Pyrrolizidine Alkaloids chemical synthesis, Cyclobutanes chemistry
- Abstract
11-Nor PGE2 was prepared in our laboratory several years ago and used to obtain the corresponding ring-expanded γ-butyrolactam, γ-butyrolactone, and cyclopentanone derivatives. The conversion of a cyclobutanone into a cyclopentanone had relatively little precedent and merited further study. It was soon found that the presence of a single chlorine adjacent to the carbonyl not only greatly accelerated the reaction with ethereal diazomethane, but also substantially enhanced its regioselectivity; not surprisingly, a second chlorine further increased both. The confluence of this finding and the discovery by Krepski and Hassner that the presence of phosphorus oxychloride significantly improved the Zn-mediated dehalogenation procedure for the preparation of α,α-dichlorocyclobutanones from olefins provided the starting point for decades' worth of exciting adventures in natural product synthesis. A wide variety of naturally occurring 5-membered carbocycles (e.g., hirsutanes, cuparenones, bakkanes, guaianolides, azulenes) could thus be prepared by using dichloroketene-olefin cycloaddition, followed by regioselective one-carbon ring expansion with diazomethane. Importantly, it was also found that natural γ-butyrolactones (e.g., β-oxygenated γ-butyrolactones, lactone fatty acids) could be secured through regioselective Baeyer-Villiger oxidation of cycloadducts with m-CPBA and that naturally occurring γ-butyrolactam derivatives (e.g., amino acids, pyrrolidines, pyrrolizidines, indolizidines) could be efficiently obtained by regioselective Beckmann ring expansion of the adducts with O-(mesitylenesulfonyl)hydroxylamine (Tamura's reagent). These 5-membered carbocycles, γ-butyrolactones, and γ-butyrolactam derivatives were generally secured in enantiopure form through the use of either intrinsically chiral olefins or olefins bearing Stericol, a highly effective chiral auxiliary developed specifically for this "three-atom olefin annelation" approach. In addition, considerable useful chemistry has been developed in the context of this synthesis program. This includes new methods for olefin vicinal dicarboxylation, β-methylene-γ-butyrolactonization, γ-butyrolactone and δ-valerolactone α-methylenations, transesterification, angelic ester synthesis, chiral enol and ynol ether preparations, dichloroacetylene synthesis, and trans, trans hydroxy triad introduction. This versatile dichlorocyclobutanone-centered approach to natural product synthesis, together with the attendant new methods that have been developed, forms the basis of this Account, which is presented as an evolutionary tale. It is hoped that the Account will stimulate other research groups to seek to exploit the rich chemistry of dichlorocyclobutanones for possible solutions to problems in organic synthesis.
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- 2016
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186. Preparation of a squaraine-bounded cellulose derivative for photocurrent generation system.
- Author
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Saito Y, Kamitakahara H, and Takano T
- Subjects
- Cyclobutanes chemistry, Molecular Structure, Phenols chemistry, Photochemistry, Quantum Theory, Cellulose chemistry, Cyclobutanes chemical synthesis, Phenols chemical synthesis
- Abstract
A regio-selectively squaraine (SQ)-bounded cellulose derivative (4) with a degree of substitution of SQ (DSSQ) of 0.55 was prepared from 6-O-(4-methoxytrityl) cellulose (1) by three reaction steps in 77% total yield. Lauryl SQ carboxylate (8) was also prepared as a reference sample. The photostability of SQ moieties of compound 4 in CHCl3 was not improved when compared with SQ-COOH (7), but that of SQ moiety of compound 8 was improved unexpectedly. The Langmuir-Blodgett monolayer films 4B and 8B on an indium tin oxide (ITO) electrode were successfully prepared from compounds 4 and 8 by a vertical dipping method, respectively. The films 4B and 8B showed photocurrent generation performances in the region of 550-680 nm. The quantum yield at 650 nm of film 4B was higher than that of film 8B. These results showed that the cellulose backbone of compound 4 acts as an effective scaffold for the good photocurrent generation performances and that compound 4 was a promising complementary material of the porphyrin-bounded cellulose derivatives (for photocurrent generation at 400-420 nm) for effective utilization of solar light, as well as the phthalocyanine-bounded cellulose derivatives (for photocurrent generation at 650-720 nm)., (Copyright © 2015 Elsevier Ltd. All rights reserved.)
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- 2016
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187. Preparation of a β-Cyclodextrin-Based Open-Tubular Capillary Electrochromatography Column and Application for Enantioseparations of Ten Basic Drugs.
- Author
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Fang L, Yu J, Jiang Z, and Guo X
- Subjects
- Azabicyclo Compounds chemistry, Azabicyclo Compounds isolation & purification, Brompheniramine chemistry, Brompheniramine isolation & purification, Carbazoles chemistry, Carbazoles isolation & purification, Carvedilol, Cyclobutanes chemistry, Cyclobutanes isolation & purification, Cyclodextrins chemistry, Microscopy, Electron, Transmission, Piperazines chemistry, Piperazines isolation & purification, Propanolamines chemistry, Propanolamines isolation & purification, Stereoisomerism, Terbutaline chemistry, Terbutaline isolation & purification, Tropanes chemistry, Tropanes isolation & purification, Venlafaxine Hydrochloride chemistry, Venlafaxine Hydrochloride isolation & purification, Capillary Electrochromatography, Chemistry Techniques, Analytical methods, Metal Nanoparticles chemistry, beta-Cyclodextrins chemistry
- Abstract
An open-tubular capillary electrochromatography column was prepared by chemically immobilized β-cyclodextrin modified gold nanoparticles onto new surface with the prederivatization of (3-mercaptopropyl)-trimethoxysilane. The synthesized nanoparticles and the prepared column were characterized by transmission electron microscopy, scanning electron microscopy, infrared spectroscopy and ultraviolet visible spectroscopy. When the column was employed as the chiral stationary phase, no enantioselectivity was observed for ten model basic drugs. So β-cyclodextrin was added to the background electrolyte as chiral additive to expect a possible synergistic effect occurring and resulting in a better separation. Fortunately, significant improvement in enantioselectivity was obtained for ten pairs of drug enantiomers. Then, the effects of β-cyclodextrin concentration and background electrolyte pH on the chiral separation were investigated. With the developed separation mode, all the enantiomers (except for venlafaxine) were baseline separated in resolutions of 4.49, 1.68, 1.88, 1.57, 2.52, 2.33, 3.24, 1.63 and 3.90 for zopiclone, chlorphenamine maleate, brompheniramine maleate, dioxopromethazine hydrochloride, carvedilol, homatropine hydrobromide, homatropine methylbromide, venlafaxine, sibutramine hydrochloride and terbutaline sulfate, respectively. Further, the possible separation mechanism involved was discussed.
- Published
- 2016
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188. Enantioselective Rh-Catalyzed Carboacylation of C═N Bonds via C-C Activation of Benzocyclobutenones.
- Author
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Deng L, Xu T, Li H, and Dong G
- Subjects
- Catalysis, Cyclization, Stereoisomerism, Cyclobutanes chemistry, Rhodium chemistry
- Abstract
Herein we describe the first enantioselective Rh-catalyzed carboacylation of oximes (imines) via C-C activation. In this transformation, the benzocyclobutenone C1-C2 bond is selectively activated by a low valent rhodium catalyst and subsequently the resulting two Rh-C bonds add across a C═N bond, which provides a unique approach to access chiral lactams. A range of polycyclic nitrogen-containing scaffolds were obtained in good yields with excellent enantioselectivity. Further derivatization of the lactam products led to a rapid entry to various novel fused heterocycles.
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- 2016
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189. In Situ Raman Monitoring of Silver(I)-Aided Laser-Driven Cleavage Reaction of Cyclobutane.
- Author
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Chen D, Han X, Du Y, Wang HL, and Xu P
- Subjects
- Cyclobutanes radiation effects, Light, Organometallic Compounds chemistry, Spectrum Analysis, Raman, Trifluoroacetic Acid chemistry, Cyclobutanes chemistry, Silver chemistry
- Abstract
The cyclobutane cleavage reaction is an important process and has received continuous interest. Herein, we demonstrate the visible laser-driven cleavage reaction of cyclobutane in crystal form by using in situ Raman spectroscopy. Silver(I) coordination-induced strain and thermal effects from the laser irradiation are the two main driving forces for the cleavage of cyclobutane crystals. This work may open up a new avenue for studying cyclobutane cleavage reactions, as compared to the conventional routes using ex situ techniques., (© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2016
- Full Text
- View/download PDF
190. Electrostatic potentials and average electron densities of bioisosteres in methylsquarate and acetic acid.
- Author
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Arabi AA and Matta CF
- Subjects
- Quantum Theory, Stereoisomerism, Acetates chemistry, Cyclobutanes chemistry, Electrons, Static Electricity
- Abstract
Background: The bioisosterism in -CO2H and -C4HO3 is exploited using the quantum theory of atoms in molecules and molecular electrostatic potentials (ESP)., Results & Discussion: Bioisosteres in methylsquarate and acetic acid, in the neutral/anionic forms, have average electron densities that differ by less than 2% (i.e., ∼0.01 atomic units) while irrespective of the capping group. The topography of the ESP reveals similarities in the case of the neutral species but not in the anionic forms., Conclusion: The nonclassical bioisosteres in methylsquarate and acetic acid have average electron densities that are similar and relatively insensitive to the ionization state (neutral or anionic) or its studied capping group (H, CH3, Cl or phenyl). The ESP reveals similarities in the topography of neutral molecules.
- Published
- 2016
- Full Text
- View/download PDF
191. Reaction of 2a,8b-Dihydrobenzo[b]cyclobute[d]pyran-3-ones with Dimethylsulfoxonium Methylide.
- Author
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Tanaka T, Nagahama M, Yadav ND, Iwasaki H, Ozeki M, Kojima N, and Yamashita M
- Subjects
- Dibenzofurans chemistry, Molecular Structure, Phenols chemistry, Cyclobutanes chemistry, Dibenzofurans chemical synthesis, Phenols chemical synthesis, Sulfonium Compounds chemistry
- Abstract
Using dimethylsulfoxonium methylide as the methylene transfer reagent, 2a,8b-dihydrobenzo[b]cyclobute[d]pyran-3-ones were converted into 2,2'-biphenol derivatives as major products and dihydrodibenzofurans as minor products. The reaction mechanism was extrapolated from a deuteration experiment with CD2=S(O)(CD3)2.
- Published
- 2016
- Full Text
- View/download PDF
192. Scopariusicides, Novel Unsymmetrical Cyclobutanes: Structural Elucidation and Concise Synthesis by a Combination of Intermolecular [2 + 2] Cycloaddition and C-H Functionalization.
- Author
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Zhou M, Li XR, Tang JW, Liu Y, Li XN, Wu B, Qin HB, Du X, Li LM, Wang WG, Pu JX, and Sun HD
- Subjects
- Catalysis, Crystallography, X-Ray, Cycloaddition Reaction, Cyclobutanes chemistry, Cyclobutanes pharmacology, Drug Discovery, Humans, Immunosuppressive Agents chemistry, Immunosuppressive Agents pharmacology, Isodon chemistry, Molecular Conformation, Molecular Structure, Stereoisomerism, T-Lymphocytes drug effects, Cyclobutanes chemical synthesis, Immunosuppressive Agents chemical synthesis
- Abstract
Scopariusicides A (1) and B (2), two novel immunosuppressive unsymmetrical cyclobutane derivatives, were isolated from the aerial parts of Isodon scoparius. Moreover, based on the results of phytochemical investigation, a concise stereocontrolled synthesis of scopariusicide A and its analogues with enhanced biological activities was efficiently achieved using the main diterpenoid (3) isolated from this plant as a readily available starting material. A crossed intermolecular [2 + 2] photocycloaddition and a Pd-catalyzed sp(3) C-H bond β-arylation were used synergistically to access the highly congested unsymmetrical cyclobutane core with four contiguous stereocenters.
- Published
- 2015
- Full Text
- View/download PDF
193. Bright fluorogenic squaraines with tuned cell entry for selective imaging of plasma membrane vs. endoplasmic reticulum.
- Author
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Collot M, Kreder R, Tatarets AL, Patsenker LD, Mely Y, and Klymchenko AS
- Subjects
- Cyclobutanes chemical synthesis, Fluorescence, Fluorescent Dyes chemical synthesis, HeLa Cells, Humans, Molecular Structure, Phenols chemical synthesis, Cell Membrane chemistry, Cyclobutanes chemistry, Endoplasmic Reticulum chemistry, Fluorescent Dyes chemistry, Phenols chemistry
- Abstract
A rational design of squaraine dyes with lipophilic and zwitterionic groups tunes cell entry, allowing for selective far-red/near-infrared imaging of plasma membrane vs. endoplasmic reticulum. They exhibit up to 110-fold fluorescence enhancement in biomembranes and enable cellular imaging at 1 nM concentration, which make them the brightest membrane probes to date.
- Published
- 2015
- Full Text
- View/download PDF
194. Cyclobutane Synthesis and Fragmentation. A Cascade Route to the Lycopodium Alkaloid (-)-Huperzine A.
- Author
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White JD, Li Y, Kim J, and Terinek M
- Subjects
- Alkaloids chemical synthesis, Cyclization, Cyclobutanes chemistry, Cyclohexanones chemistry, Sesquiterpenes chemistry, Stereoisomerism, Alkaloids chemistry, Bridged Bicyclo Compounds chemical synthesis, Bridged Bicyclo Compounds chemistry, Lycopodium chemistry, Pyridines chemistry, Sesquiterpenes chemical synthesis
- Abstract
An asymmetric total synthesis of the nootropic alkaloid (-)-huperzine A was completed using a cascade sequence initiated by an intramolecular aza-Prins reaction and terminated by a stereoelectronically guided fragmentation of a cyclobutylcarbinyl cation as the key step in assembling the bicyclo[3.3.1]nonene core of the natural product. Intramolecular [2 + 2]-photocycloaddition of the crotyl ether of (S)-4-hydroxycyclohex-2-enone afforded a bicyclo[4.2.0]octanone containing an embedded tetrahydrofuran in which the cyclohexanone moiety was converted to a triisopropylsilyl enol ether and functionalized as an allylic azide. The derived primary amine was acylated with α-phenylselenylacrylic acid, and the resulting amide was reacted with trimethylaluminum to give a [2 + 2]-cycloadduct, which underwent retroaldol fission to produce a fused α-phenylselenyl δ-lactam. Periodate oxidation of this lactam led directly to an α-pyridone, which was converted to a fused 2-methoxypyridine. Reductive cleavage of the activated "pyridylic" C-O bond in this tetracycle and elaboration of the resultant hydroxy ketone to a diketone was followed by chemoselective conversion of the methyl ketone in this structure to an endo isopropenyl group. Condensation of the remaining ketone with methyl carbamate in the presence of acid initiated the programmed cascade sequence and furnished a known synthetic precursor to huperzine A. Subsequent demethylation of the carbamate and the methoxypyridine, accompanied by in situ decarboxylation of the intermediate carbamic acid, gave (-)-huperzine A.
- Published
- 2015
- Full Text
- View/download PDF
195. Effective Amyloid Defibrillation by Polyhydroxyl-Substituted Squaraine Dyes.
- Author
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Jayaram DT, Shankar BH, and Ramaiah D
- Subjects
- Amyloid chemistry, Circular Dichroism, Dynamic Light Scattering, Fluorescent Dyes chemistry, Kinetics, Microscopy, Atomic Force, Microscopy, Electron, Transmission, Muramidase metabolism, Amyloid metabolism, Cyclobutanes chemistry, Phenols chemistry
- Abstract
With an objective to develop β-amyloid destabilizing agents, we have investigated the interactions of a few water-soluble near-infrared (NIR)-absorbing squaraine dyes 1-3 with lysozyme and its amyloid aggregates through photophysical and biophysical techniques. These dyes exhibited strong interactions with lysozyme and β-amyloids in addition to serum albumins as evidenced by the absorption and emission changes. The interactions were found to be spontaneous with association constant values in the range of approximately 10(4)-10(5) m(-1), as confirmed through half-reciprocal analysis and isothermal calorimetric measurements. Uniquely, such effective interactions of the dyes have led to the complete disassembly of the β-amyloid fibrillar structures to form spherical particles approximately 350 nm in size, as confirmed through photophysical, thioflavin assay, circular dichroism (CD), atomic force microscopy (AFM), TEM, and selected-area electron diffraction (SAED) techniques. These results demonstrate that the squaraine dyes 1-3 under investigation act as effective protein-labelling and destabilizing agents of the protein amyloidogenesis., (© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2015
- Full Text
- View/download PDF
196. CF3-Substituted semisquarate: a pluripotent building block for the divergent synthesis of trifluoromethylated functional molecules.
- Author
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Yamamoto Y, Kurohara T, and Shibuya M
- Subjects
- Cyclobutanes chemical synthesis, Indicators and Reagents, Chemistry Techniques, Synthetic, Cyclobutanes chemistry, Fluorocarbons chemical synthesis, Quinones chemical synthesis
- Abstract
The first synthesis of a CF3-substituted semisquarate was accomplished via nucleophilic trifluoromethylation using CF3SiMe3 and subsequent rhenium-catalyzed allylic alcohol rearrangement. The short-step skeletal-divergent synthesis of trifluoromethylated functional molecules was successfully achieved using the CF3-substituted semisquarate as the platform.
- Published
- 2015
- Full Text
- View/download PDF
197. Diastereo- and enantioselective direct vinylogous Michael addition of γ-substituted butenolides to 2-enoylpyridines catalyzed by chiral bifunctional amine-squaramides.
- Author
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Wang ZH, Wu ZJ, Huang XQ, Yue DF, You Y, Xu XY, Zhang XM, and Yuan WC
- Subjects
- 4-Butyrolactone chemistry, Catalysis, Cyclobutanes chemistry, Molecular Structure, Pyridines chemistry, Stereoisomerism, 4-Butyrolactone analogs & derivatives, 4-Butyrolactone chemical synthesis, Cyclobutanes chemical synthesis, Pyridines chemical synthesis
- Abstract
The diastereo- and enantioselective direct vinylogous Michael addition reaction of γ-substituted butenolides to 2-enoylpyridines has been achieved. A range of γ,γ-disubstituted butenolide derivatives, bearing two consecutive tri- and tetrasubstituted stereogenic centers, were readily obtained in good yields with excellent stereoselectivities (up to >99 : 1 dr and >99% ee).
- Published
- 2015
- Full Text
- View/download PDF
198. Intrinsic Folding Proclivities in Cyclic β-Peptide Building Blocks: Configuration and Heteroatom Effects Analyzed by Conformer-Selective Spectroscopy and Quantum Chemistry.
- Author
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Alauddin M, Gloaguen E, Brenner V, Tardivel B, Mons M, Zehnacker-Rentien A, Declerck V, and Aitken DJ
- Subjects
- Hydrogen Bonding, Models, Molecular, Protein Conformation, Quantum Theory, Amides chemistry, Cyclobutanes chemistry, Peptides, Cyclic chemistry, Spectrophotometry, Infrared methods
- Abstract
This work describes the use of conformer-selective laser spectroscopy following supersonic expansion to probe the local folding proclivities of four-membered ring cyclic β-amino acid building blocks. Emphasis is placed on stereochemical effects as well as on the structural changes induced by the replacement of a carbon atom of the cycle by a nitrogen atom. The amide A IR spectra are obtained and interpreted with the help of quantum chemistry structure calculations. Results provide evidence that the building block with a trans-substituted cyclobutane ring has a predilection to form strong C8 hydrogen bonds. Nitrogen-atom substitution in the ring induces the formation of the hydrazino turn, with a related but distinct hydrogen-bonding network: the structure is best viewed as a bifurcated C8/C5 bond with the N heteroatom lone electron pair playing a significant acceptor role, which supports recent observations on the hydrazino turn structure in solution. Surprisingly, this study shows that the cis-substituted cyclobutane ring derivative also gives rise predominantly to a C8 hydrogen bond, although weaker than in the two former cases, a feature that is not often encountered for this building block., (© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2015
- Full Text
- View/download PDF
199. Sensitive Structural Control of Macrocycle Threading by a Fluorescent Squaraine Dye Flanked by Polymer Chains.
- Author
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Liu W, Peck EM, Hendzel KD, and Smith BD
- Subjects
- Kinetics, Models, Molecular, Molecular Structure, Polymers chemistry, Thermodynamics, Cyclobutanes chemistry, Fluorescent Dyes chemistry, Phenols chemistry
- Abstract
A macrocyclic tetralactam is threaded by a complementary squaraine dye that is flanked by two polyethylene glycol chains to produce a pseudorotaxane complex with favorable near-infrared fluorescence properties. The association thermodynamics and kinetics were measured for a homologous series of squaraines with different N-alkyl substituents at both ends of the dye. The results show that subtle changes in substituent steric size have profound effects on threading kinetics without greatly altering the very high association constant.
- Published
- 2015
- Full Text
- View/download PDF
200. In Vivo Spectrum of UVC-induced Mutation in Mouse Skin Epidermis May Reflect the Cytosine Deamination Propensity of Cyclobutane Pyrimidine Dimers.
- Author
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Ikehata H, Mori T, and Yamamoto M
- Subjects
- Animals, Cyclobutanes chemistry, Deamination, Dimerization, Mice, Mice, Transgenic, Mutation, Pyrimidines pharmacology, Cyclobutanes pharmacology, Cytosine chemistry, Epidermis drug effects, Epidermis radiation effects, Mutagenicity Tests, Pyrimidines chemistry, Ultraviolet Rays
- Abstract
Although ultraviolet radiation (UVR) has a genotoxicity for inducing skin cancers, the skin may tolerate UVC component because the epidermal layer prevents this short wavelength range from passing through. Here, UVC genotoxicity for mouse skin was evaluated in terms of DNA damage formation and mutagenicity. UVC induced UVR photolesions and mutations remarkably in the epidermis but poorly in the dermis, confirming the barrier ability of the epidermis against shorter UVR wavelengths. Moreover, the epidermis itself responded to UVC mutagenicity with mutation induction suppression, which suppressed the mutant frequencies to a remarkably low, constant level regardless of UVC dose. The mutation spectrum observed in UVC-exposed epidermis showed a predominance of UV-signature mutation, which occurred frequently in 5'-TCG-3', 5'-TCA-3' and 5'-CCA-3' contexts. Especially, for the former two contexts, the mutations recurred at several sites with more remarkable recurrences at the 5'-TCG-3' sites. Comparison of the UVC mutation spectrum with those observed in longer UVR wavelength ranges led us to a mechanism that explains why the sequence context preference of UV-signature mutation changes according to the wavelength, which is based on the difference in the mCpG preference of cyclobutane pyrimidine dimer (CPD) formation among UVR ranges and the sequence context-dependent cytosine deamination propensity of CPD., (© 2015 The American Society of Photobiology.)
- Published
- 2015
- Full Text
- View/download PDF
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