1. Tersicoccus mangrovi sp. nov., a novel actinobacterium from mangrove sediment in Semarang city, Indonesia.
- Author
-
Sibero MT, Zheng ZQ, Li FN, Liu SW, Xiang X, Tuo L, and Sun CH
- Subjects
- Indonesia, Phospholipids analysis, Phospholipids chemistry, Wetlands, Genome, Bacterial, RNA, Ribosomal, 16S genetics, Base Composition, Phylogeny, Geologic Sediments microbiology, Fatty Acids chemistry, DNA, Bacterial genetics, Sequence Analysis, DNA, Nucleic Acid Hybridization, Bacterial Typing Techniques, Vitamin K 2 analogs & derivatives, Vitamin K 2 analysis
- Abstract
A Gram-stain-positive, aerobic and non-motile actinobacterium, designated strain MR15.9
T , was isolated from sediment collected from a mangrove ecosystem in Semarang city, Indonesia. Strain MR15.9T grew at 4-37 °C (optimum 30 °C), pH 6.0-11.0 (optimum 7.0-8.0), with 0-10% (w/v) NaCl (optimum 0-3%). The genome of strain MR15.9T was 3.67 Mbp with 71.7 mol% G+C content. Phylogenetic analysis based on 16S rRNA gene sequence and genome sequence directed that strain MR15.9T formed a well-supported clade with Tersicoccus solisilvae CGMCC 1.15480T and Tersicoccus phoenicis 1P05MAT and shared the highest similarity to T. solisilvae CGMCC 1.15480T (98.9% sequence similarity) and T. phoenicis 1P05MAT (98.6% sequence similarity). However, the comparative genome analysis between strain MR15.9T and T. solisilvae CGMCC 1.15480T gave average nt identity value of 85.2% and digital DNA-DNA hybridization value of 29.0%, which were below the statistical threshold for the delineation of the species. Chemotaxonomic data showed that the major fatty acids were anteiso-C15:0 , anteiso-C17:0 and iso-C16:0 . The polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, two unidentified glycolipids and two unidentified phospholipids. MK-8(H2 ) and MK-9(H2 ) were noted as the predominant respiratory quinones in this strain. The results of polyphasic characterization indicated that strain MR15.9T represents a novel species of the genus Tersicoccus . The name Tersicoccus mangrovi sp. nov. is proposed, with the type strain MR15.9T (=MCCC 1K08875T =KCTC 59105T ).- Published
- 2025
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