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Friedmanniella endophytica sp. nov., an endophytic actinobacterium isolated from bark of Kandelia candel.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2016 Aug; Vol. 66 (8), pp. 3057-3062. Date of Electronic Publication: 2016 May 11. - Publication Year :
- 2016
-
Abstract
- A coccus-shaped, non-spore-forming actinobacterium, designated strain 4Q3S-3T, was isolated from surface-sterilized bark of the mangrove plant Kandelia candel collected from Cotai Ecological Zones in Macao, China, and tested by a polyphasic approach to clarify its taxonomic position. This actinobacterium was Gram-stain-positive and aerobic. Neither substrate nor aerial mycelia were formed, and no diffusible pigments were observed on the media tested. Strain 4Q3S-3T grew optimally without NaCl at 28-30 °C, pH 7.0-8.0. Phylogenetic analysis based on 16S rRNA gene sequence showed that strain 4Q3S-3T belonged to the genus Friedmanniella and shared the highest 16S rRNA gene sequence similarity with Friedmanniellaflava W6T (96.57 %). The DNA G+C content of strain 4Q3S-3T was 69.5 mol%. The cell-wall peptidoglycan contained ll-2,6-diaminopimelic acid, and MK-9(H4) was the predominant menaquinone. The polar lipids comprised phosphatidylglycerol, diphosphatidylglycerol, phosphatidylinositol, unidentified glycolipid, amino lipids and two unidentified phospholipids. The predominant fatty acids were anteiso-C15 : 0, iso-C16 : 0 and iso-C15 : 0. Based on phylogenetic, phenotypic and chemotaxonomic data, strain 4Q3S-3T represents a novel species of the genus Friedmanniella, for which the name Friedmanniella endophytica sp. nov. is proposed. The type strain is 4Q3S-3T (=DSM 100723T=CGMCC 4.7307T).
- Subjects :
- Actinomycetales genetics
Actinomycetales isolation & purification
Bacterial Typing Techniques
Base Composition
Cell Wall chemistry
China
DNA, Bacterial genetics
Diaminopimelic Acid chemistry
Fatty Acids chemistry
Glycolipids chemistry
Nucleic Acid Hybridization
Peptidoglycan chemistry
Phospholipids chemistry
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Vitamin K 2 analogs & derivatives
Vitamin K 2 chemistry
Actinomycetales classification
Phylogeny
Plant Bark microbiology
Rhizophoraceae microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 66
- Issue :
- 8
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 27169592
- Full Text :
- https://doi.org/10.1099/ijsem.0.001146