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2. Outcomes after perioperative SARS-CoV-2 infection in patients with proximal femoral fractures: an international cohort study
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T Richards, S Shaikh, S Rehman, A Khan, J Shah, C Smith, A Brown, S Singh, A P Arnaud, A Young, D Bowen, P Patel, S Williams, J Dunn, J John, M Loubani, A Hainsworth, A Kolias, PJ Hutchinson, R Singh, S Sinha, S Shaw, J Edwards, S Mukherjee, AAB Jamjoom, A Singh, S Saeed, J Martin, S Smith, S Ross, M Mohan, P Hutchinson, G James, RDC Moon, P Brennan, A Williams, S Brown, A Ward, M Lee, K Thompson, S Ali, J Williams, S Reid, U Khan, J Lambert, A Smith, B Singh, M Hassan, N Sharma, J Reynolds, N Wright, T Williams, H Smith, M Ng, M Rahman, A Taylor, P Shah, D Saxena, J Evans, I Omar, M Ali, A Hanson, Z Li, R Andrade, P Cardoso, H Jeong, P Sharma, M Arrieta, J Clark, L Pearce, J McVeigh, V Sharma, B Kim, J Singh, S Newman, J Byrne, A Hassan, A Persad, A Gardner, H Liu, K Shah, I Hughes, S Davison, A Balakrishnan, K Patel, J Hall, S Mistry, J Parry, R Baumber, N McGrath, E Ross, R Mannion, S Murphy, FL Wright, A Rogers, B Rai, M Thomas, R Ribeiro, E Hamilton, J Teixeira, B Davidson, L 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Springford, C Sohrabi, J Bacarese-Hamilton, FG Taylor, P Patki, C Tanabalan, ME Alexander, CJ Smart, L Abdeh, M Zeiton, R Advani, S Nikolaou, T Oni, N Ilahi, K Ballantyne, Z Woodward, R Merh, B Robertson-Smith, P Ameerally, JG Finch, C Gnanachandran, I Pop, D Dass, G Thiruchandran, Toh SKC, A Allana, C Bellis, O Babawale, YC Phan, U Lokman, T Koc, L Duggleby, S Shamoon, H Clancy, A Mansuri, A Thakrar, L Wickramarachchi, S Sivayoganathan, E Karam, HV Colvin, A Badran, A Cadersa, A Cumpstey, R Aftab, F Wensley, V Morrison-Jones, GK Sekhon, H Shields, Z Shakoor, T Talbot, A Alzetani, J Rooney, M Rudic, A Aladeojebi, M Kitchen, R Lefroy, P Nanjaiah, AD Rajgor, RJ Scurrah, LJ Watson, T Royle, B Steel, Luk ACO, VG Thiruvasagam, W Marlow, C Konstantinou, D Yershov, A Denning, E Mangos, T Nambirajan, I Flindall, V Mahendran, J De Marchi, NF Davis, A Picciariello, V Papagni, DF Altomare, S Granieri, C Cotsoglou, A Cabeleira, P Serralheiro, T Teles, C Canhoto, J Simões, AC Almeida, O Nogueira, R Athayde Nemésio, MJ Amaral, A Valente da Costa, R Martins, P Guerreiro, A Ruivo, D Breda, JM Oliveira, AL De Oliveira Lopez, M Colino, J De Barros, AP Soares, H Morais, T Revez, MI Manso, JC Domingues, P Henriques, Cardoso N Ribeiro VI, G Martins dos Santos, M Peralta Ferreira, J Ascensão, B Costeira, L Rio Rodrigues, M Sousa Fernandes, P Azevedo, I Lourenço, G Mendinhos, A Nobre Pinto, H Taflin, H Abdou, L O'Meara, Z Cooper, SA Hirji, BU Okafor, V Roxo, CP Raut, JS Jolissaint, DA Mahvi, C Reinke, S Merola, A Ssentongo, P Ssentongo, Oh JS, J Hazelton, J Maines, N Gusani, RCG Martin, N Bhutiani, R Choron, F Soliman, MD E Dauer, E Renza-Stingone, E Gokcen, E Kropf, H Sufrin, J Sewards, J Poggio, K Sanserino, L Rae, M Philp, M Metro, P McNelis, R Petrov, T Pazionis, DB Lumenta, SP Nischwitz, E Richtig, M Pau, P Srekl-Filzmaier, N Eibinger, B Michelitsch, M Fediuk, A Papinutti, TU Cohnert, E Kantor, J Kahiu, S Hosny, A Sultana, M Taggarsi, L Vitone, OP Vaz, I Sarantitis, S Timbrell, A Shugaba, GP Jones, SS Tripathi, MS Greenhalgh, H Emerson, K Vejsbjerg, W McCormick, K Singisetti, Y Aawsaj, R Vanker, M Ghobrial, S Kanthasamy, H Fawi, M Awadallah, J Cheung, S Tingle, F Abbadessa, A Sachdeva, CD Chan, I McPherson, F Mahmoud Ali, S Pandanaboyana, T Grainger, S Nandhra, N Dawe, C McCaffer, J Riches, J Moir, H Elamin Ahmed, C Saleh, RM Koshy, LJ Rogers, PL Labib, N Hope, K Emslie, P Panahi, E Clough, I Enemosah, J Natale, N Raza, JI Webb, M Antar, J Noel, R Nunn, F Eriberto, R Tanna, S Lodhia, C Osório, J Antunes, P Balau, and M Godinho
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Medicine - Abstract
Objectives Studies have demonstrated high rates of mortality in people with proximal femoral fracture and SARS-CoV-2, but there is limited published data on the factors that influence mortality for clinicians to make informed treatment decisions. This study aims to report the 30-day mortality associated with perioperative infection of patients undergoing surgery for proximal femoral fractures and to examine the factors that influence mortality in a multivariate analysis.Setting Prospective, international, multicentre, observational cohort study.Participants Patients undergoing any operation for a proximal femoral fracture from 1 February to 30 April 2020 and with perioperative SARS-CoV-2 infection (either 7 days prior or 30-day postoperative).Primary outcome 30-day mortality. Multivariate modelling was performed to identify factors associated with 30-day mortality.Results This study reports included 1063 patients from 174 hospitals in 19 countries. Overall 30-day mortality was 29.4% (313/1063). In an adjusted model, 30-day mortality was associated with male gender (OR 2.29, 95% CI 1.68 to 3.13, p80 years (OR 1.60, 95% CI 1.1 to 2.31, p=0.013), preoperative diagnosis of dementia (OR 1.57, 95% CI 1.15 to 2.16, p=0.005), kidney disease (OR 1.73, 95% CI 1.18 to 2.55, p=0.005) and congestive heart failure (OR 1.62, 95% CI 1.06 to 2.48, p=0.025). Mortality at 30 days was lower in patients with a preoperative diagnosis of SARS-CoV-2 (OR 0.6, 95% CI 0.6 (0.42 to 0.85), p=0.004). There was no difference in mortality in patients with an increase to delay in surgery (p=0.220) or type of anaesthetic given (p=0.787).Conclusions Patients undergoing surgery for a proximal femoral fracture with a perioperative infection of SARS-CoV-2 have a high rate of mortality. This study would support the need for providing these patients with individualised medical and anaesthetic care, including medical optimisation before theatre. Careful preoperative counselling is needed for those with a proximal femoral fracture and SARS-CoV-2, especially those in the highest risk groups.Trial registration number NCT04323644
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- 2021
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3. Youth Science Learning as/for Community Participation: Examples from Youth Participatory Action Research
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Steven M. Worker, Sally Neas, Dorina M. Espinoza, Car Mun Kok, and Martin H. Smith
- Abstract
Youth development programs often provide young people with science learning experiences. We argue for reframing youth science learning from a focus on individual scientific literacy to an emphasis on collective scientific literacy--"community science"--to support young people in using science to address issues in their lives and communities. We provide examples from youth participatory action research (YPAR), one community science pedagogical approach. The YPAR model supports youth in deciding upon an environmental, economic, or social issue; designing and implementing research; and using their research findings to improve their community. We implemented YPAR with eight cohorts of youth over three years at five schools in Northern California. Using data generated from educator interviews and youth focus groups and analyzed with inductive thematic analysis, we explored what youth and educators reported about science engagement and learning. While YPAR projects offered opportunities for youth to strengthen scientific literacy, youth did not join a YPAR program because it was science education. Instead, as youth selected a personally meaningful topic, they began to see how they might affect community change. Engaging learners in relevant educational experiences situated in authentic community issues may improve motivation for deeper and sustained participation in science learning. Our YPAR example demonstrated an approach to learning STEM in youth development programs by ensuring relevancy and connection to community.
- Published
- 2023
4. The 'Space Between': Situated Professional Development to Enhance 4-H Educators' Pedagogical Design Capacity for Effective Curriculum Enactment
- Author
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Martin H. Smith, Gemma Miner, and Lynn Schmitt-McQuitty
- Abstract
Curricula are planned and written by curriculum developers; they serve as instructional guides for educators. Educators make adaptations to written curricula to meet learners' needs and achieve intended learning outcomes. The efficacy of curriculum adaptations is enhanced when educators have a high pedagogical design capacity, which can be improved through effective professional development. Lesson study is a model of situated professional development centered around ongoing improvement of curriculum enactment. Educators work collaboratively to make curriculum modifications and data-driven decisions to improve their teaching practices. Lesson study occurs at regular intervals over an extended duration.
- Published
- 2023
5. NCBench: providing an open, reproducible, transparent, adaptable, and continuous benchmark approach for DNA-sequencing-based variant calling [version 2; peer review: 2 approved with reservations]
- Author
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Friederike Hanssen, Gisela Gabernet, Famke Bäuerle, Bianca Stöcker, Felix Wiegand, Nicholas H. Smith, Christian Mertes, Avirup Guha Neogi, Leon Brandhoff, Anna Ossowski, Janine Altmueller, Kerstin Becker, Andreas Petzold, Marc Sturm, Tyll Stöcker, Sugirthan Sivalingam, Fabian Brand, Axel Schmidt, Andreas Buness, Alexander J. Probst, Susanne Motameny, and Johannes Köster
- Subjects
Research Article ,Articles ,continuous ,benchmarking ,NGS ,variant calling - Abstract
We present the results of the human genomic small variant calling benchmarking initiative of the German Research Foundation (DFG) funded Next Generation Sequencing Competence Network (NGS-CN) and the German Human Genome-Phenome Archive (GHGA). In this effort, we developed NCBench, a continuous benchmarking platform for the evaluation of small genomic variant callsets in terms of recall, precision, and false positive/negative error patterns. NCBench is implemented as a continuously re-evaluated open-source repository. We show that it is possible to entirely rely on public free infrastructure (Github, Github Actions, Zenodo) in combination with established open-source tools. NCBench is agnostic of the used dataset and can evaluate an arbitrary number of given callsets, while reporting the results in a visual and interactive way. We used NCBench to evaluate over 40 callsets generated by various variant calling pipelines available in the participating groups that were run on three exome datasets from different enrichment kits and at different coverages. While all pipelines achieve high overall quality, subtle systematic differences between callers and datasets exist and are made apparent by NCBench.These insights are useful to improve existing pipelines and develop new workflows. NCBench is meant to be open for the contribution of any given callset. Most importantly, for authors, it will enable the omission of repeated re-implementation of paper-specific variant calling benchmarks for the publication of new tools or pipelines, while readers will benefit from being able to (continuously) observe the performance of tools and pipelines at the time of reading instead of at the time of writing.
- Published
- 2024
- Full Text
- View/download PDF
6. Dipsticks and diagnostic algorithms in urinary tract infection: development and validation, randomised trial, economic analysis, observational cohort and qualitative study
- Author
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P Little, S Turner, K Rumsby, G Warner, M Moore, JA Lowes, H Smith, C Hawke, D Turner, GM Leydon, A Arscott, and M Mullee
- Subjects
urinary-tract-infection ,dipsticks ,natural-history ,antibiotics ,Medical technology ,R855-855.5 - Abstract
Objectives: To estimate clinical and dipstick predictors of infection and develop and test clinical scores; to compare management using clinical and dipstick scores with commonly used alternative strategies; to estimate the cost-effectiveness of each strategy; and to understand the natural history of urinary tract infection (UTI) and women’s concerns about its presentation and management. Design: There were six studies: (1) validation development for diagnostic clinical and dipstick scores; (2) validation of the scores developed; (3) observation of the natural history of UTI; (4) randomised controlled trial (RCT) of scores developed in study 1; (5) economic analysis of the RCT; (6) qualitative study of patients in the RCT. Setting: Primary care. Participants: Women aged 17–70 with suspected UTI. Interventions: Patients were randomised to five management approaches: empirical antibiotics; empirical delayed antibiotics; target antibiotics based on a higher symptom score; target antibiotics based on dipstick results; or target antibiotics based on a positive mid-stream specimen of urine (MSU). Main outcome measures: Antibiotic use, use of MSUs, rates of reconsultation and duration, and severity of symptoms. Results: (1) 62.5% of women had confirmed UTI. Only nitrite, leucocyte esterase and blood independently predicted diagnosis of UTI. A dipstick rule – based on having nitrite or both leucocytes and blood – was moderately sensitive (77%) and specific (70%) [positive predictive value (PPV) 81%, negative predictive value (NPV) 65%]. A clinical rule – based on having two of urine cloudiness, offensive smell, reported moderately severe dysuria, moderately severe nocturia – was less sensitive (65%) (specificity 69%, PPV 77%, NPV 54%). (2) 66% of women had confirmed UTI. The predictive values of nitrite, leucocyte esterase and blood were confirmed. The dipstick rule was moderately sensitive (75%) but less specific (66%) (PPV 81%, NPV 57%). (3) Symptoms rated as moderately bad or worse lasted 3.25 days on average for infections sensitive to antibiotics; resistant infections lasted 56% longer, infections not treated with antibiotics 62% longer and symptoms associated with urethral syndrome 33% longer. Symptom duration was shorter if the doctor was perceived to be positive about prognosis, and longer with frequent somatic symptoms, previous history of cystitis, urinary frequency and more severe symptoms at baseline. (4) 66% of the MSU group had laboratory-confirmed UTI. Women suffered 3.5 days of moderately bad symptoms if they took antibiotics immediately but 4.8 days if they delayed taking antibiotics for 48 hours. Taking bicarbonate or cranberry juice had no effect. (5) The MSU group was more costly over 1 month but not over 1 year. Cost-effectiveness acceptability curves showed that for a value per day of moderately bad symptoms of over £10, the dipstick strategy is most likely to be cost-effective. (6) Fear of spread to the kidneys, blood in the urine, and the impact of symptoms on vocational and leisure activities were important triggers for seeking help. When patients are asked to delay taking antibiotics the uncomfortable and worrying journey from ‘person to patient’ needs to be acknowledged and the rationale behind delaying the antibiotics made clear. Conclusions: To achieve good symptom control and reduce antibiotic use clinicians should either offer a 48-hour delayed antibiotic prescription to be used at the patient’s discretion or target antibiotic treatment by dipsticks (positive nitrite or positive leucocytes and blood) with the offer of a delayed prescription if dipstick results are negative.
- Published
- 2009
- Full Text
- View/download PDF
7. A prospective randomised comparison of minor surgery in primary and secondary care. The MiSTIC trial
- Author
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S George, P Pockney, J Primrose, H Smith, P Little, H Kinley, R Kneebone, A Lowy, B Leppard, N Jayatilleke, and C McCabe
- Subjects
Medical technology ,R855-855.5 - Published
- 2008
- Full Text
- View/download PDF
8. A randomised controlled trial to compare the cost-effectiveness of tricyclic antidepressants, selective serotonin reuptake inhibitors and lofepramine
- Author
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R Peveler, T Kendrick, M Buxton, L Longworth, D Baldwin, M Moore, J Chatwin, J Goddard, A Thornett, H Smith, M Campbell, and C Thompson
- Subjects
Medical technology ,R855-855.5 - Published
- 2005
- Full Text
- View/download PDF
9. NCBench: providing an open, reproducible, transparent, adaptable, and continuous benchmark approach for DNA-sequencing-based variant calling [version 1; peer review: 1 approved with reservations]
- Author
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Friederike Hanssen, Gisela Gabernet, Nicholas H. Smith, Christian Mertes, Avirup Guha Neogi, Leon Brandhoff, Anna Ossowski, Janine Altmueller, Kerstin Becker, Andreas Petzold, Marc Sturm, Tyll Stöcker, Sugirthan Sivalingam, Fabian Brand, Axel Schmid, Andreas Buness, Alexander J. Probst, Susanne Motameny, and Johannes Köster
- Subjects
Research Article ,Articles ,continuous ,benchmarking ,NGS ,variant calling - Abstract
We present the results of the human genomic small variant calling benchmarking initiative of the German Research Foundation (DFG) funded Next Generation Sequencing Competence Network (NGS-CN) and the German Human Genome-Phenome Archive (GHGA). In this effort, we developed NCBench, a continuous benchmarking platform for the evaluation of small genomic variant callsets in terms of recall, precision, and false positive/negative error patterns. NCBench is implemented as a continuously re-evaluated open-source repository. We show that it is possible to entirely rely on public free infrastructure (Github, Github Actions, Zenodo) in combination with established open-source tools. NCBench is agnostic of the used dataset and can evaluate an arbitrary number of given callsets, while reporting the results in a visual and interactive way. We used NCBench to evaluate over 40 callsets generated by various variant calling pipelines available in the participating groups that were run on three exome datasets from different enrichment kits and at different coverages. While all pipelines achieve high overall quality, subtle systematic differences between callers and datasets exist and are made apparent by NCBench.These insights are useful to improve existing pipelines and develop new workflows. NCBench is meant to be open for the contribution of any given callset. Most importantly, for authors, it will enable the omission of repeated re-implementation of paper-specific variant calling benchmarks for the publication of new tools or pipelines, while readers will benefit from being able to (continuously) observe the performance of tools and pipelines at the time of reading instead of at the time of writing.
- Published
- 2023
- Full Text
- View/download PDF
10. Water-Based Dynamic Depsipeptide Chemistry: Building Block Recycling and Oligomer Distribution Control Using Hydration–Dehydration Cycles
- Author
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Martin C, Moran Frenkel-Pinter, Kelvin H. Smith, Victor F. Rivera-Santana, Alyssa B. Sargon, Kaitlin C. Jacobson, Aikomari Guzman-Martinez, Loren Dean Williams, Luke J. Leman, Charles L. Liotta, Martha A. Grover, and Nicholas V. Hud
- Published
- 2022
- Full Text
- View/download PDF
11. Serum concentrations of chlorinated dibenzo-p-dioxins, furans and PCBs, among former phenoxy herbicide production workers and firefighters in New Zealand
- Author
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‘t Mannetje, Andrea, Eng, Amanda, Walls, Chris, Dryson, Evan, McLean, Dave, Kogevinas, Manolis, Fowles, Jeff, Borman, Barry, O’Connor, Patrick, Cheng, Soo, Brooks, Collin, H. Smith, Allan, and Pearce, Neil
- Subjects
Agent Orange & Dioxin ,2 ,4 ,5-Trichlorophenoxyacetic Acid ,Adult ,Aged ,Aged ,80 and over ,Air Pollutants ,Occupational ,Benzofurans ,Chemical Industry ,Dibenzofurans ,Polychlorinated ,Female ,Firefighters ,Herbicides ,Humans ,Male ,Middle Aged ,New Zealand ,Occupational Exposure ,Occupations ,Polychlorinated Biphenyls ,Polychlorinated Dibenzodioxins ,Time Factors ,Occupational exposure ,2 ,3 ,7 ,8-Tetrachlorodibenzo-p-dioxin ,Biological monitoring ,Polychlorinated biphenyls ,1 ,2 ,3 ,4 ,7-Pentachlorodibenzo-p-dioxin ,Public Health and Health Services ,Environmental & Occupational Health - Abstract
PurposeTo quantify serum concentrations of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) and dioxin-like compounds in former phenoxy herbicide production plant workers and firefighters, 20 years after 2,4,5-T production ceased.MethodsOf 1025 workers employed any time during 1969-1984, 430 were randomly selected and invited to take part in a morbidity survey and provide a blood sample; 244 (57%) participated. Firefighters stationed in close proximity of the plant and/or engaged in call-outs to the plant between 1962 and 1987 also participated (39 of 70 invited). Reported here are the serum concentrations of TCDD and other chlorinated dibenzo-dioxins, dibenzofurans, and polychlorinated biphenyls (PCBs). Determinants of the serum concentrations were assessed using linear regression.ResultsThe 60 men who had worked in the phenoxy/TCP production area had a mean TCDD serum concentration of 19.1 pg/g lipid, three times the mean concentration of the 141 men and 43 women employed in other parts of the plant (6.3 and 6.0 pg/g respectively), and more than 10 times the mean for the firefighters (1.6 pg/g). Duration of employment in phenoxy herbicide synthesis, maintenance work, and work as a boilerman, chemist, and packer were associated with increased serum concentrations of TCDD and 1,2,3,4,7-pentachlorodibenzo-p-dioxin (PeCDD). Employment as a boilerman was also associated with elevated serum concentrations of PCBs.ConclusionsOccupations in the plant associated with phenoxy herbicide synthesis had elevated levels of TCDD and PeCDD. Most other people working within the plant, and the local firefighters, had serum concentrations of dioxin-like compounds comparable to those of the general population.
- Published
- 2016
12. Serum concentrations of chlorinated dibenzo-p-dioxins, furans and PCBs, among former phenoxy herbicide production workers and firefighters in New Zealand.
- Author
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't Mannetje, Andrea, Eng, Amanda, Walls, Chris, Dryson, Evan, McLean, Dave, Kogevinas, Manolis, Fowles, Jeff, Borman, Barry, O'Connor, Patrick, Cheng, Soo, Brooks, Collin, H Smith, Allan, and Pearce, Neil
- Subjects
Humans ,2 ,4 ,5-Trichlorophenoxyacetic Acid ,Polychlorinated Biphenyls ,Benzofurans ,Herbicides ,Air Pollutants ,Occupational ,Occupational Exposure ,Time Factors ,Chemical Industry ,Adult ,Aged ,Aged ,80 and over ,Middle Aged ,Occupations ,New Zealand ,Female ,Male ,Firefighters ,Polychlorinated Dibenzodioxins ,Dibenzofurans ,Polychlorinated ,1 ,2 ,3 ,4 ,7-Pentachlorodibenzo-p-dioxin ,2 ,3 ,7 ,8-Tetrachlorodibenzo-p-dioxin ,Biological monitoring ,Occupational exposure ,Polychlorinated biphenyls ,2 ,4 ,5-Trichlorophenoxyacetic Acid ,Air Pollutants ,Occupational ,and over ,Dibenzofurans ,Polychlorinated ,1 ,3 ,7-Pentachlorodibenzo-p-dioxin ,7 ,8-Tetrachlorodibenzo-p-dioxin ,Environmental & Occupational Health ,Public Health and Health Services - Abstract
PurposeTo quantify serum concentrations of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) and dioxin-like compounds in former phenoxy herbicide production plant workers and firefighters, 20 years after 2,4,5-T production ceased.MethodsOf 1025 workers employed any time during 1969-1984, 430 were randomly selected and invited to take part in a morbidity survey and provide a blood sample; 244 (57%) participated. Firefighters stationed in close proximity of the plant and/or engaged in call-outs to the plant between 1962 and 1987 also participated (39 of 70 invited). Reported here are the serum concentrations of TCDD and other chlorinated dibenzo-dioxins, dibenzofurans, and polychlorinated biphenyls (PCBs). Determinants of the serum concentrations were assessed using linear regression.ResultsThe 60 men who had worked in the phenoxy/TCP production area had a mean TCDD serum concentration of 19.1 pg/g lipid, three times the mean concentration of the 141 men and 43 women employed in other parts of the plant (6.3 and 6.0 pg/g respectively), and more than 10 times the mean for the firefighters (1.6 pg/g). Duration of employment in phenoxy herbicide synthesis, maintenance work, and work as a boilerman, chemist, and packer were associated with increased serum concentrations of TCDD and 1,2,3,4,7-pentachlorodibenzo-p-dioxin (PeCDD). Employment as a boilerman was also associated with elevated serum concentrations of PCBs.ConclusionsOccupations in the plant associated with phenoxy herbicide synthesis had elevated levels of TCDD and PeCDD. Most other people working within the plant, and the local firefighters, had serum concentrations of dioxin-like compounds comparable to those of the general population.
- Published
- 2016
13. Wasp aids oriental fruit moth control
- Author
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H Smith
- Subjects
Agriculture - Abstract
The infiltration of the Oriental fruit moth into California was discovered in the peach orchards of Orange County in 1942.
- Published
- 1948
14. FUSE Spectroscopy of Two Luminosity Class II Giants
- Author
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Graeme H. Smith and Laura E. Langland-Shula
- Published
- 2023
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15. Microwave Switch Architecture for Superconducting Integrated Circuits Using Magnetic Field-Tunable Josephson Junctions
- Author
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A. L. Graninger, J. M. Cochran, A. A. Pesetski, J. D. Strand, R. E. Zimmerman, N. L. Mungo, C. H. Smith, and M. Lilly
- Subjects
Electrical and Electronic Engineering ,Condensed Matter Physics ,Electronic, Optical and Magnetic Materials - Published
- 2023
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- View/download PDF
16. The perils of contact sport: pathologies of diffuse brain swelling and chronic traumatic encephalopathy neuropathologic change in a 23-year-old rugby union player
- Author
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Edward B. Lee, Claire Kennedy-Dietrich, Jennian F. Geddes, James A. R. Nicoll, Tamas Revesz, Douglas H. Smith, and William Stewart
- Subjects
Cellular and Molecular Neuroscience ,Neurology (clinical) ,Pathology and Forensic Medicine - Published
- 2023
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- View/download PDF
17. Endoscopic‐guided diagnosis of and interventional stent placement for nasolacrimal duct obstruction in a horse
- Author
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Levi H. Smith, Larry Adams, Maxime Derré, and Wendy M. Townsend
- Subjects
General Veterinary - Published
- 2023
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- View/download PDF
18. Energetic Oxygen and Sulfur Charge States in the Outer Jovian Magnetosphere: Insights From the Cassini Jupiter Flyby
- Author
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R. C. Allen, C. P. Paranicas, F. Bagenal, S. K. Vines, D. C. Hamilton, F. Allegrini, G. Clark, P. A. Delamere, T. K. Kim, S. M. Krimigis, D. G. Mitchell, T. H. Smith, and R. J. Wilson
- Published
- 2019
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19. OSIRIS‐REx Visible and Near‐Infrared Observations of the Moon
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A. A. Simon, K. L. Donaldson Hanna, C. Y. Drouet d'Aubigny, G. Poggiali, J. P. Emery, J. Brucato, R. G. Cosentino, D. C. Reuter, D. R. Golish, D. N. DellaGiustina, A. Lunsford, N. Gorius, P. H. Smith, and D. S. Lauretta
- Published
- 2019
- Full Text
- View/download PDF
20. The Grayness of the Origin of Life
- Author
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Hillary H. Smith, Andrew S. Hyde, Danielle Simkus, Eric Libby, Sarah E. Maurer, Heather V. Graham, Christopher P. Kempes, Barbara Sherwood Lollar, Luoth Chou, Andrew D. Ellington, G. Matthew Fricke, Peter R. Girguis, Natalie M. Grefenstette, Chad Ian Pozarycki, Christopher H. House, and Sarah Stewart Johnson
- Subjects
Life Sciences (General) - Abstract
In the search for life beyond Earth, distinguishing the living from the non-living is paramount. However, this distinction is often elusive, as the origin of life is likely a stepwise evolutionary process, not a singular event. Regardless of the favored origin of life model, an inherent “grayness” blurs the theorized threshold defining life. Here, we explore the ambiguities between the biotic and the abiotic at the origin of life. The role of grayness extends into later transitions as well. By recognizing the limitations posed by grayness, life detection researchers will be better able to develop methods sensitive to prebiotic chemical systems and life with alternative biochemistries.
- Published
- 2021
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21. Addressing the problem of scale that emerges with habitat fragmentation
- Author
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Robert J. Fletcher, Matthew G. Betts, Ellen I. Damschen, Trevor J. Hefley, Jessica Hightower, Thomas A. H. Smith, Marie‐Josée Fortin, and Nick M. Haddad
- Subjects
Global and Planetary Change ,Ecology ,Ecology, Evolution, Behavior and Systematics - Published
- 2023
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- View/download PDF
22. A tale of two paths: The evolution of mitochondrial recombination in bivalves with doubly uniparental inheritance
- Author
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Chase H Smith, Brendan J Pinto, Mark Kirkpatrick, David M Hillis, John M Pfeiffer, and Justin C Havird
- Subjects
Genetics ,Molecular Biology ,Genetics (clinical) ,Biotechnology - Abstract
In most animals, mitochondrial DNA is strictly maternally inherited and non-recombining. One exception to these assumptions is called doubly uniparental inheritance (DUI): a phenomenon involving the independent transmission of female and male mitochondrial genomes. DUI is known only from the molluscan class Bivalvia. The phylogenetic distribution of male mitochondrial DNA in bivalves is consistent with several evolutionary scenarios, including multiple independent gains, losses, and varying degrees of recombination with female mitochondrial DNA. In this study, we use phylogenetic methods to test male mitochondrial DNA origination hypotheses and infer the prevalence of mitochondrial recombination in bivalves with DUI. Phylogenetic modeling using site concordance factors supported a single origin of male mitochondrial DNA in bivalves coupled with recombination acting over long evolutionary timescales. Ongoing mitochondrial recombination is present in Mytilida and Venerida, which results in a pattern of concerted evolution of female and male mitochondrial DNA. Mitochondrial recombination could be favored to offset the deleterious effects of asexual inheritance and maintain mitonuclear compatibility across tissues. Cardiida and Unionida have gone without recent recombination, possibly due to an extension of theCOX2gene in male mitochondrial DNA. The loss of recombination may be neutral but could be connected to the role of M mtDNA in sex determination or sexual development. Our results support recombination events in DUI species may occur throughout their genomes. Future investigations may reveal more complex patterns of inheritance of recombinants, which could explain the retention of signal for a single origination of male mitochondrial DNA in protein coding genes.
- Published
- 2023
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23. Abstract P1-12-05: The Impact of Adjuvant Chemotherapy, Including Taxanes, on Breast Cancer-Related Lymphedema Risk
- Author
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Amanda W. Jung, Brooke Juhel, Louisa H. Smith, Cheryl L. Brunelle, Elizabeth K. Hausman, Loryn K. Bucci, George E. Naoum, and Alphonse G. Taghian
- Subjects
Cancer Research ,Oncology - Abstract
BACKGROUND: Adjuvant chemotherapy, particularly taxane-based chemotherapies, which are used to treat high-risk breast cancers, has been shown to be efficacious in prolonging overall survival. However, the impact of such therapies on risk of breast cancer-related lymphedema (BCRL) is yet to be fully understood. Available studies have contradictory findings as to whether or not taxanes increase BCRL risk. Unfortunately, methodological flaws, such as not incorporating a preoperative baseline arm volume measurement or utilizing flawed measurement techniques and diagnostic criteria, result in misdiagnosis of the primary outcome of BCRL and it is therefore difficult to draw conclusions from these studies. As such, a more comprehensive understanding of the potential risks associated with these treatment modalities can improve quality of care as patients are better prepared to face a potentially devastating sequela of breast cancer treatment. PURPOSE: The purpose of this study is to determine if chemotherapy administered in the adjuvant setting is an independent risk factor of BCRL, as well as to assess any specific risks of taxane-based chemotherapy on BCRL. METHODS: From 2005 to 2021, 2049 patients treated for breast cancer were enrolled in a prospective BCRL screening trial and screened from preoperative baseline through last follow-up. Screening included objective arm volume measurements via perometry. Chemotherapy data and clinicopathological and demographic characteristics were collected directly from the electronic medical record. Patients who had not received neoadjuvant chemotherapy were eligible for the current study; they were classified based on whether they had received taxane-based chemotherapy, non-taxane chemotherapy only, or no chemotherapy. Relative volume change (RVC) increase ≥10% from preoperative baseline >3 months postoperatively was used to define BCRL. Patients were censored at cancer recurrence or most recent clinic visit. We fit a Cox regression model to estimate adjusted hazard ratios (aHR) for BCRL. The model was adjusted for baseline BMI, axillary lymph node dissection (ALND), regional lymph node radiation (RLNR), age at diagnosis, and smoking history. RESULTS: The eligible cohort included 1759 patients, including 564 (32%) who received taxane-based chemotherapy and 104 (6%) who received non-taxane chemotherapy only. The median follow-up time for the entire cohort was 58 months. 141/1759 (8%) of patients developed BCRL. The median time to develop BCRL was 21 months post-operatively. Compared to no chemotherapy, the aHR associated with taxane-based chemotherapy was 1.04 (95% CI 0.37, 1.8; p = 0.62). Compared to no chemotherapy, the aHR for non-taxane chemotherapy was 0.82 (95% CI 0.67, 1.6; p = 0.86). There was no significant difference between taxane and non-taxane therapies in terms of BCRL risk (p = 0.55). ALND, RLNR, and high BMI remained independent risk factors for BCRL, consistent with the published literature. CONCLUSION: The receipt of adjuvant chemotherapy and specifically adjuvant taxane-based chemotherapy were not associated with increased risk of BCRL in this cohort of 1759 patients at risk of and prospectively screened for BCRL. Citation Format: Amanda W. Jung, Brooke Juhel, Louisa H. Smith, Cheryl L. Brunelle, Elizabeth K. Hausman, Loryn K. Bucci, George E. Naoum, Alphonse G. Taghian. The Impact of Adjuvant Chemotherapy, Including Taxanes, on Breast Cancer-Related Lymphedema Risk [abstract]. In: Proceedings of the 2022 San Antonio Breast Cancer Symposium; 2022 Dec 6-10; San Antonio, TX. Philadelphia (PA): AACR; Cancer Res 2023;83(5 Suppl):Abstract nr P1-12-05.
- Published
- 2023
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24. Evaluating a Project Extension for Community Health Outcomes Pediatric Behavioral Health Series in a Rural and Frontier State: An Exploratory Investigation
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Madeline P. Casanova, Ashley J. Reeves, Jonathan D. Moore, Seungho Ryu, Kathleen Palmer, Lachelle H. Smith, Jeffrey G. Seegmiller, and Russell T. Baker
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Medicine (miscellaneous) ,Health Informatics ,Computer Science Applications - Published
- 2023
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- View/download PDF
25. Abstract P1-12-04: Side Effects of the mRNA COVID-19 Vaccines in Women Treated for Breast Cancer
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Brooke Juhel, Cheryl L. Brunelle, Madison C. Bernstein, Louisa H. Smith, Amanda W. Jung, Elizabeth K. Hausman, Loryn K. Bucci, George E. Naoum, and Alphonse G. Taghian
- Subjects
Cancer Research ,Oncology - Abstract
Background: The introduction of the novel COVID-19 vaccination raised concerns regarding side effects from patients who had undergone breast cancer treatment. Lymph node swelling after the mRNA vaccines (Moderna, Pfizer) is a distressing side effect for women treated for breast cancer as it may indicate cancer progression or recurrence. Patients at risk of breast cancer-related lymphedema (BCRL) are fearful that lymph node swelling from the vaccine could incite or worsen BCRL. Data investigating associated side effects in this population is essential for patient education and future self-advocacy. Purpose: The purpose of this study was to elicit side effects associated with the COVID vaccine in women treated for breast cancer. Methods: 4,945 surveys were sent to women over the age of 18 who had received breast cancer treatment and had been prospectively screened for BCRL with perometry. 621 participants who received an mRNA vaccine and responded to the survey were included in analysis, 469 of whom completed booster dose surveys. Participants were asked about type and duration of side effects after each vaccine dose. Solicited side effects included injection site soreness, swelling, or redness; swelling, numbness, or heaviness of the arm; generalized muscle soreness (GMS); fatigue; headache; joint pain; chills; nausea; vomiting; fever; Bell’s palsy; axillary or supraclavicular lymph node swelling; other; or none of the above. We computed frequencies and the median duration of side effects for each dose. To investigate predictors of side effects, we fit multivariable logistic regression models separately for each side effect, with random effects for participants to account for clustered responses. We considered significant predictors those with p < 0.05. Results: Of the 621 participants, the median follow-up time between breast surgery and date of first vaccine dose was 69 months. The distribution of the top 5 side effects is presented in Table 1. Of note, the majority of participants who reported lymph node swelling (9.8% dose 1, 12.9% dose 2, 11.3% dose 3) reported it in the axilla ipsilateral to the vaccine (54.1% D1, 61.3% D2, 71.7% D3). Lymph node swelling was also reported in the axilla contralateral to the vaccine (45.9% D1, 45% D2, 24.5% D3), supraclavicular region ipsilateral (29.5% D1, 26.3% D2, 32.1% D3) and contralateral (18% D1, 18.8% D2, 9.4% D3) to the vaccine. Older patients reported each side effect significantly less frequently. Those who had received neoadjuvant chemotherapy reported significantly more GMS and headache than those who did not. Those who had received regional lymph node radiation were less likely to report GMS, as were patients who had sentinel lymph node biopsies (vs. no lymph node surgery). The median duration of side effects for all three doses was 48 hours or less, with the plurality (41.0% D1, 38.7% D2, 44.1% D3) of participants reporting side effects lasting 24 hours or less. While all side effects apart from injection site soreness were significantly more common in the second than the first doses, the duration of side effects only increased for 28.1% of participants. Conclusion: Over 86% of women treated for breast cancer may experience at least one side effect after any dose of the COVID-19 vaccine. This data, collected specifically for patients with breast cancer, will help enhance guidelines for structured and universal education regarding additional doses of the vaccine in the future. This will allow patients to better understand COVID vaccine side effect profiles after breast cancer treatment and self-advocate prior to future doses. Table 1. Top 5 Side Effects Reported Citation Format: Brooke Juhel, Cheryl L. Brunelle, Madison C. Bernstein, Louisa H. Smith, Amanda W. Jung, Elizabeth K. Hausman, Loryn K. Bucci, George E. Naoum, Alphonse G. Taghian. Side Effects of the mRNA COVID-19 Vaccines in Women Treated for Breast Cancer [abstract]. In: Proceedings of the 2022 San Antonio Breast Cancer Symposium; 2022 Dec 6-10; San Antonio, TX. Philadelphia (PA): AACR; Cancer Res 2023;83(5 Suppl):Abstract nr P1-12-04.
- Published
- 2023
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26. Human spinal cord tissue is an underutilised resource in degenerative cervical myelopathy: findings from a systematic review of human autopsies
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Esmee Dohle, Sophie Beardall, Aina Chang, Karla P. Corral Mena, Luka Jovanović, Upamanyu Nath, Keng Siang Lee, Alexandria H. Smith, Arun J. Thirunavukarasu, Alvaro Yanez Touzet, Emma Jane Norton, Oliver D. Mowforth, Mark R. N. Kotter, Benjamin M. Davies, Dohle, Esmee [0000-0002-5385-2026], and Apollo - University of Cambridge Repository
- Subjects
Male ,Histology ,Ossification posterior longitudinal ligament ,Pathophysiology ,Spinal Cord Diseases ,Systematic review ,Cervical Vertebrae ,Cadaver ,Animals ,Humans ,Female ,Surgery ,Autopsy ,Neurology (clinical) ,Degenerative cervical myelopathy ,Aged ,Demyelinating Diseases - Abstract
Study design Systematic review. Background Although degenerative cervical myelopathy (DCM) is the most prevalent spinal cord condition worldwide, the pathophysiology remains poorly understood. Our objective was to evaluate existing histological findings of DCM on cadaveric human spinal cord tissue and explore their consistency with animal models. Methods MEDLINE and Embase were systematically searched (CRD42021281462) for primary research reporting on histological findings of DCM in human cadaveric spinal cord tissue. Data was extracted using a piloted proforma. Risk of bias was assessed using Joanna Briggs Institute critical appraisal tools. Findings were compared to a systematic review of animal models (Ahkter et al. 2020 Front Neurosci 14). Results The search yielded 4127 unique records. After abstract and full-text screening, 19 were included in the final analysis, reporting on 150 autopsies (71% male) with an average age at death of 67.3 years. All findings were based on haematoxylin and eosin (H&E) staining. The most commonly reported grey matter findings included neuronal loss and cavity formation. The most commonly reported white matter finding was demyelination. Axon loss, gliosis, necrosis and Schwann cell proliferation were also reported. Findings were consistent amongst cervical spondylotic myelopathy and ossification of the posterior longitudinal ligament. Cavitation was notably more prevalent in human autopsies compared to animal models. Conclusion Few human spinal cord tissue studies have been performed. Neuronal loss, demyelination and cavitation were common findings. Investigating the biological basis of DCM is a critical research priority. Human spinal cord specimen may be an underutilised but complimentary approach.
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- 2023
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27. Linking soil health to human health: Arbuscular mycorrhizae play a key role in plant uptake of the antioxidant ergothioneine from soils
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Joseph E. Carrara, Steven J. Lehotay, Alan R. Lightfield, Dongxiao Sun, John P. Richie, Andrew H. Smith, and Wade P. Heller
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Forestry ,Plant Science ,Horticulture ,Ecology, Evolution, Behavior and Systematics - Published
- 2023
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28. Comparative Effectiveness and Safety of Seizure Prophylaxis Among Adults After Acute Ischemic Stroke
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Lidia M.V.R. Moura, Maria A. Donahue, Zhiyu Yan, Louisa H. Smith, John Hsu, Joseph P. Newhouse, Lee H. Schwamm, Sebastien Haneuse, Sonia Hernandez-Diaz, and Deborah Blacker
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Advanced and Specialized Nursing ,Neurology (clinical) ,Cardiology and Cardiovascular Medicine - Abstract
Background: Older adults occasionally receive seizure prophylaxis in an acute ischemic stroke (AIS) setting, despite safety concerns. There are no trial data available about the net impact of early seizure prophylaxis on post-AIS survival. Methods: Using a stroke registry (American Heart Association’s Get With The Guidelines) individually linked to electronic health records, we examined the effect of initiating seizure prophylaxis (ie, epilepsy-specific antiseizure drugs) within 7 days of an AIS admission versus not initiating in patients ≥65 years admitted for a new, nonsevere AIS (National Institutes of Health Stroke Severity score ≤20) between 2014 and 2021 with no recorded use of epilepsy-specific antiseizure drugs in the previous 3 months. We addressed confounding by using inverse-probability weights. We performed standardization accounting for pertinent clinical and health care factors (eg, National Institutes of Health Stroke Severity scale, prescription counts, seizure-like events). Results: The study sample included 151 patients who received antiseizure drugs and 3020 who did not. The crude 30-day mortality risks were 219 deaths per 1000 patients among epilepsy-specific antiseizure drugs initiators and 120 deaths per 1000 among noninitiators. After standardization, the estimated mortality was 251 (95% CI, 190–307) deaths per 1000 among initiators and 120 (95% CI, 86–144) deaths per 1000 among noninitiators, corresponding to a risk difference of 131 (95% CI, 65–200) excess deaths per 1000 patients. In the prespecified subgroup analyses, the risk difference was 52 (95% CI, 11–72) among patients with minor AIS and 138 (95% CI, 52–222) among moderate-to-severe AIS patients. Similarly, the risk differences were 86 (95% CI, 18–118) and 157 (95% CI, 57–219) among patients aged 65 to 74 years and ≥75 years, respectively. Conclusions: There was a higher risk of 30-day mortality associated with initiating versus not initiating seizure prophylaxis within 7 days post-AIS. This study does not support the role of seizure prophylaxis in reducing 30-day poststroke mortality.
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- 2023
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29. Co‐design development of a decision guide on eating and drinking for people with severe dementia during acute hospital admissions
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Kanthee Anantapong, Andrea Bruun, Anne Walford, Christina H. Smith, Jill Manthorpe, Elizabeth L. Sampson, and Nathan Davies
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Public Health, Environmental and Occupational Health - Published
- 2023
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30. Acculturation, Hispanic ethnicity, and trust: Verifying and explaining racial/ethnic differences in trust in health providers in North Carolina Medicaid
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Galen H. Smith, Cicily Hampton, Hollie L. Tripp, and William P. Brandon
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Public Administration ,Sociology and Political Science ,Social Sciences (miscellaneous) - Abstract
Three North Carolina Medicaid surveys conducted from 2000 to 2012 reported increasing numbers of Hispanic children enrolled in Medicaid and much lower trust in providers expressed by their adult caregiver respondents compared with responses for non-Hispanic Black and White children. To verify and explain this apparent trust chasm, we used bivariate and regression analyses. The variables employed included trust (dependent variable); child’s race/ethnicity, age, and sex; satisfaction and health status scales; two utilization measures; respondent’s age, sex, and education; geographical region; and population density of county of residence. Race/ethnicity was strongly associated with trust (p < .001), controlling for other independent variables. Access, satisfaction, and respondent’s age and education were also significant. Our results fit the Behavioral Model for Vulnerable Populations, which maps the role of significant variables in health-seeking behavior. After analyzing the concept of trust, we argue that lower acculturation explains lower Hispanic trust compared with non-Hispanic Blacks. We suggest policies to improve acculturation.
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- 2023
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31. Variations in color and reflectance on the surface of asteroid (101955) Bennu
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D. N. DellaGiustina, K. N. Burke, K. J. Walsh, P. H. Smith, D. R. Golish, E. B. Bierhaus, R.-L. Ballouz, T. L. Becker, H. Campins, E. Tatsumi, K. Yumoto, S. Sugita, J. D. Prasanna Deshapriya, E. A. Cloutis, B. E. Clark, A. R. Hendrix, A. Sen, M. M. Al Asad, M. G. Daly, D. M. Applin, C. Avdellidou, M. A. Barucci, K. J. Becker, C. A. Bennett, W. F. Bottke, J. I. Brodbeck, H. C. Connolly Jr, M. Delbo, J. de Leon, C.Y. Drouet d’Aubigny, K. L. Edmundson, S. Fornasier, V. E. Hamilton, P. H. Hasselmann, C. W. Hergenrother, E. S. Howell, E. R. Jawin, H. H. Kaplan, L. Le Corre, L. F. Lim, J.Y. Li, P. Michel, J. L. Molaro, M. C. Nolan, J. Nolau, M. Pajola, A. Parkinson, M. Popescu, N. A. Porter, B. Rizk, J. L. Rizos, A. J. Ryan, B. Rozitis, N. K. Shultz, A. A. Simon, D. Trang, R. B. Van Auken, C. W. V. Wolner, and D. S. Lauretta
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Astronomy ,Lunar And Planetary Science And Exploration - Abstract
Visible-wavelength color and reflectance provide information about the geologic history of planetary surfaces. Here we present multispectral images (0.44 to 0.89 micrometers) of near-Earth asteroid (101955) Bennu. The surface has variable colors overlain on a moderately blue global terrain. Two primary boulder types are distinguishable by their reflectance and texture. Space weathering of Bennu surface materials does not simply progress from red to blue (or vice versa). Instead, freshly exposed, redder surfaces initially brighten in the near-ultraviolet region (i.e., become bluer at shorter wavelengths), then brighten in the visible to near-infrared region, leading to Bennu’s moderately blue average color. Craters indicate that the time scale of these color changes is ~105 years. We attribute the reflectance and color variation to a combination of primordial heterogeneity and varying exposure ages.
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- 2020
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32. Overcoming the Challenges Associated with Image‐Based Mapping of Small Bodies in Preparation for the OSIRIS‐REx Mission to (101955) Bennu
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D. N. DellaGiustina, C. A. Bennett, K. Becker, D. R. Golish, L. Le Corre, D. A. Cook, K. L. Edmundson, M. Chojnacki, S. S. Sutton, M. P. Milazzo, B. Carcich, M. C. Nolan, N. Habib, K. N. Burke, T. Becker, P. H. Smith, K. J. Walsh, K. Getzandanner, D. R. Wibben, J. M. Leonard, M. M. Westermann, A. T. Polit, J. N. Kidd, C. W. Hergenrother, W. V. Boynton, J. Backer, S. Sides, J. Mapel, K. Berry, H. Roper, C. Drouet d'Aubigny, B. Rizk, M. K. Crombie, E. K. Kinney‐Spano, J. de León, J. L. Rizos, J. Licandro, H. C. Campins, B. E. Clark, H. L. Enos, and D. S. Lauretta
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- 2018
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33. Food and Beer Matching to Promote Destinations: A Central and Eastern European Perspective
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Elizabeth M. Ineson, Richard H. Smith, and Adrian T. Barsby
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Tourism, Leisure and Hospitality Management ,Geography, Planning and Development - Published
- 2022
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34. The impact of developmental dyslexia on workplace cognition: evidence from a virtual reality environment
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James H. Smith-Spark, Rebecca Gordon, and Ashok S. Jansari
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Human-Computer Interaction ,Arts and Humanities (miscellaneous) ,Developmental and Educational Psychology ,General Social Sciences - Published
- 2022
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35. Parents’ experiences of feeding children born with oesophageal atresia/tracheo-oesophageal fistula
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Alexandra Stewart, Christina H. Smith, Roganie Govender, Simon Eaton, Paolo De Coppi, and Jo Wray
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Parents ,Pediatrics, Perinatology and Child Health ,Humans ,Surgery ,General Medicine ,Child ,Esophageal Atresia ,Tracheoesophageal Fistula - Abstract
Feeding difficulties are widely acknowledged following oesophageal atresia/tracheo-oesophageal fistula repair. However, little is understood about the nature and severity of these difficulties. This study explored feeding in children with oesophageal atresia/tracheo-oesophageal fistula from the parent perspective.In collaboration with a patient support group, data were collected using a research-specific online discussion forum. Thematic analysis was used to code the data and identify themes.One hundred and twenty-seven parents registered for the online forum, of whom 83 (65%) provided demographic data. Seventy-four (89%) of responders were mothers, 75 (90%) were of white ethnicity, 65 (78%) were from the UK. Six key themes were identified: feeding is a traumatic experience, feeding my child is scary, feeding is isolating and filled with uncertainty, feeding outside of the home is difficult, feeding associated emotions, developing coping strategies. Parents described features of medical, nutritional, feeding skill and psychosocial dysfunction across all stages of eating/drinking development. They described how their child's feeding difficulties had an impacted their own well-being. An interactional model of feeding difficulties in OA/TOF is proposed.Exploring parent experiences provides rich data from which to expand understanding of the complex nature of feeding difficulties in OA/TOF. Feeding should be viewed as a dyadic process, occurring within a family system. Intervention for feeding difficulties should be family-centred, addressing parental anxiety, trauma and uncertainty, as well as the child's underlying medical/surgical needs to optimise outcome. Further study of clinical correlates with parental experience is required.IV (non-experimental, qualitative).
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- 2022
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36. Development and use of a high-throughput screen to identify novel modulators of the corticotropin releasing factor binding protein
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Carolina L. Haass-Koffler, T. Chase Francis, Pauravi Gandhi, Reesha Patel, Mohammad Naemuddin, Carsten K. Nielsen, Selena E. Bartlett, Antonello Bonci, Stefan Vasile, Becky L. Hood, Eigo Suyama, Michael P. Hedrick, Layton H. Smith, Allison S. Limpert, Marisa Roberto, Nicholas D.P. Cosford, and Douglas J. Sheffler
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Mice ,HEK293 Cells ,Corticotropin-Releasing Hormone ,Research Design ,Humans ,Animals ,Molecular Medicine ,Biochemistry ,Analytical Chemistry ,Biotechnology - Abstract
Stress responses are believed to involve corticotropin releasing factor (CRF), its two cognate receptors (CRFWe miniaturized a cell-based assay, where CRFBP(10kD) is fused as a chimera with CRFWe found that CRFBP(10kD) potentiates CRF-intracellular CaThese results provide the first evidence of specific roles for CRF
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- 2022
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37. A systematic review and meta‐analysis: Assessment of hospital walking programs among older patients
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Christine Loyd, Yue Zhang, Tara Weisberg, James Boyett, Elizabeth R. Huckaby, Jeri Grundhoefer, Steve Otero, Lisa Roberts, Samantha Giordano‐Mooga, Carmen Capo‐Lugo, Catherine H. Smith, Richard E. Kennedy, Barbara J. King, and Cynthia J. Brown
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General Nursing - Abstract
The aim of this study is to assess effect of hospital walking programs on outcomes for older inpatients and to characterize hospital walking dose reported across studies.A systematic review and meta-analysis examining impact of hospital walking and/or reported walking dose among medical-surgical inpatients. For inclusion, studies were observational or experimental, published in English, enrolled inpatients aged ≥ 65 yrs hospitalized for medical or surgical reasons.Searches of PubMed, CINAHL, Embase, Scopus, NICHSR, OneSearch, ClinicalTrials.gov, and PsycINFO were completed in December 2020. Two reviewers screened sources, extracted data, and performed quality bias appraisal.Hospital walking dose was reported in 6 studies and commonly as steps/24 hr. Length of stay (LOS) was a common outcome reported. Difference in combined mean LOS between walking and control groups was -5.89 days. Heterogeneity across studies was considerable (I
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- 2022
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38. Factors associated with never‐use of long‐acting reversible contraception among adult reproductive‐aged women in <scp>Ohio</scp>
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Payal Chakraborty, Shibani Chettri, Maria F. Gallo, Mikaela H. Smith, Robert B. Hood, Danielle Bessett, John B. Casterline, Alison H. Norris, and Abigail Norris Turner
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Sociology and Political Science ,Public Health, Environmental and Occupational Health ,Obstetrics and Gynecology - Abstract
The number of women using long-acting reversible contraception (LARC)-intrauterine devices (IUDs) and implants-is increasing and 14% of contraceptive users in the United States adopt LARC. We examined correlates of LARC never-use in a population-based survey of reproductive-aged women in Ohio.We analyzed data from the 2018-19 Ohio Survey of Women. We examined the prevalence of LARC never-use and reasons for never-use among ever users of contraception (N = 2388). Using Poisson regression to generate prevalence ratios (PRs), we examined associations between selected correlates (demographic factors, healthcare access/quality measures, and religious/political views) and LARC never-use.Most Ohio women (74%) had never used LARC. Commonly reported reasons for not using an IUD or an implant were preferring a different method (46% and 45%, respectively), not wanting an object inside their body (45% and 43%), side effect concerns (39% and 33%), insertion/removal concerns (31% and 25%), and unfamiliarity (13% and 20%). Conservative political views (PR: 1.12, 95% confidence interval [CI]: 1.04-1.22), pro-life affiliation (PR: 1.11, 95% CI: 1.02-1.20), placing high importance on religion in daily life (PR: 1.15, 95% CI: 1.06-1.26), and being non-Hispanic white as compared to non-Hispanic Black (PR: 1.20, 95% CI: 1.02-1.41) were significantly associated with LARC never-use. Findings were generally similar for models analyzing IUD and implant never-use separately.Among ever-users of contraception, LARC never-use was associated with having conservative political views, being religious, and having a pro-life affiliation. Except for race/ethnicity, demographic and healthcare measures were not associated with LARC never-use among women in Ohio.
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- 2022
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39. The Impact of Immune-Modifying Treatments for Skin Diseases on the Immune Response to COVID-19 Vaccines: a Narrative Review
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Su-Yi Liew, Timothy Tree, Catherine H. Smith, and Satveer K. Mahil
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Dermatology - Abstract
Purpose of Review SARS-CoV-2 has had a devastating global effect, with vaccinations being paramount in the public health strategy against COVID-19. Vaccinations have uncoupled infection from adverse COVID-19 outcomes worldwide. While immune-modifying therapies are effective for the management of skin diseases such as psoriasis and atopic dermatitis, these medications also impair protective immune responses. There has been longstanding uncertainty and concern over the impact of immune-modifying therapies on the effectiveness of vaccines; for example, it is well recognised that methotrexate impairs humoral responses to both influenza and pneumococcal vaccines. This narrative review aims to discuss the evidence to date on the impact of immune-modifying therapies on the immune response to COVID-19 vaccines, with a focus on the first two vaccine doses. Recent Findings Individuals receiving immune-modifying therapy are more likely to have attenuated humoral responses to a single dose of COVID-19 vaccine compared to healthy controls; however, this may be improved by a complete course of vaccination. B cell targeted biologics such as rituximab markedly impair the humoral response to both the first and second COVID-19 vaccination. There remains a paucity of data on cellular immune responses, with the few available studies indicating lower responses to two vaccine doses in individuals receiving immune-modifying therapies compared to healthy controls, which may impact the durability of immune responses. Summary Inadequate humoral immune responses to a single dose of vaccine in the context of immune-modifying therapy are improved by a complete course of vaccination. Individuals receiving immune-modifying treatments should be encouraged to take up a complete vaccine course to mitigate their risk against COVID-19. Research in large patient populations on the longevity/kinetics of the complex humoral and cellular response to subsequent vaccine doses, including against newer variants of concern, is warranted, in addition to data on immune correlates of vaccine clinical effectiveness.
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- 2022
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40. The Effect of Amniotic Tissue on Spinal Interventions: A Systematic Review
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M, Lane Moore, David G, Deckey, Jordan R, Pollock, John-Rudolph H, Smith, John M, Tokish, and Matthew T, Neal
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Orthopedics and Sports Medicine ,Surgery ,Biologics - Abstract
BACKGROUND: Amniotic membrane tissue has been thought to potentiate healing in many soft tissue conditions. Specifically, recent studies have shown its therapeutic potential for treatment in the setting of spinal pathologies. The purpose of this study is to thoroughly review the existing scientific literature and evidence concerning the clinical use of amniotic membrane–derived biologic agents on postoperative outcomes following spinal surgery. METHODS: A systematic review was conducted following preferred reporting items for systematic reviews and meta-analyses guidelines using PubMed, Embase, and Cochrane databases up to December 2020 to identify animal and clinical studies examining the therapeutic potential for amniotic membrane tissue in the setting of spinal pathologies (including disc herniation, prevention of epidural fibrosis, and spinal fusion). Studies were broken down into 2 categories: experimental model type and the type of amnion product being analyzed. RESULTS: A total of 12 studies (4 clinical studies and 8 studies utilizing animal models) met inclusion criteria. Additionally, the major types of amnion product were divided into cryopreserved/freeze-dried amniotic membrane, human amniotic fluid, human amniotic membrane, cross-linked amniotic membrane, and amnion-derived epithelial cells. While heterogeneity of study design precludes definitive specific results reporting, most studies showed positive benefits on healing/outcomes with amniotic augmentation. Specifically, amnion products have shown promising effects in reducing epidural adhesions and scar tissue after spine surgery, improving spinal fusion rate and postoperative pain scores, and promoting better functional outcomes after spine surgery. CONCLUSIONS: A review of the limited number of reported studies revealed a wide variety of amniotic membrane preparations, treatment regimens, and indications, which limit definitive conclusions. To date, while there is no definitive clinical proof that amniotic tissues enhance tissue repair or regeneration, the aggregate results demonstrate promising basic science and outcomes potential in spinal surgery. Further study is warranted to determine whether this application is appropriate in the clinical setting. CLINICAL RELEVANCE: This systematic review provides a summary of the existing literature regarding the use of amniotic membrane preparations, treatment regimens, and indications within spinal surgery. With the growing popularity and utilization of biologic agents such as amniotic membrane-derived products in orthopedic and neurologic surgery, this systematic review gives physicians a concise summary on the outcomes and indications associated with amniotic membrane products. LEVEL OF EVIDENCE: 4.
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- 2022
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41. Menthol Cigarette Use Among Adults Who Smoke Cigarettes, 2008–2020: Rapid Growth and Widening Inequities in the United States
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Renee D Goodwin, Ollie Ganz, Andrea H Weinberger, Philip H Smith, Katarzyna Wyka, and Cristine D Delnevo
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Public Health, Environmental and Occupational Health ,Original Investigations - Abstract
Introduction In April 2021, the U.S. Food and Drug Administration announced its intention to issue a product standard banning menthol as a characterizing flavor in cigarettes. Given the potential relevance of national estimates of menthol use to pending legislation, this study estimated the prevalence of menthol use among U.S. adults who smoke cigarettes in 2020 and investigated changes in menthol use from 2008 to 2019 by sociodemographics, mental health, and substance use. Aims and Methods Nationally representative annual, cross-sectional data from the National Survey on Drug Use and Health, which included participants ages 18 years and older residing in the United States from 2008 to 2019 and the 2020. Data were analyzed using logistic and linear regression models to estimate trends in menthol use among adults who smoke cigarettes by sociodemographic, mental health and substance use variables (total analytic sample 2008–2019 n = 128 327). Results In 2020, 43.4% of adults who smoked cigarettes in the past month used menthol. Menthol use was most common among black adults (80%) and over 50% of those Hispanic, female, young (ages 18–34 years), lesbian/gay, with serious psychological distress, and with cigar use used menthol. Menthol use increased among adults who used cigarettes from 2008 to 2019, overall, and grew more rapidly among adults ages 26–34 years, Hispanic, light cigarette use (1–5 per day), and those who smoked cigars. Conclusions Menthol use has increased among U.S. adults who smoke cigarettes over the past decade. Enacting menthol bans could have a widespread public health impact, especially among younger and minoritized groups. Implications Menthol cigarette use increased among individuals who smoke cigarettes from 2008 to 2019 in the United States. In 2020, over 40% of smokers used menthol, and menthol use was considerably higher among adult smokers from racial/ethnic minoritized groups, who were younger and who reported mental health problems. The U.S. Food and Drug Administration seeks to ban menthol as a characterizing flavor in cigarettes; our results suggest that such a ban is likely to have a wide-ranging impact on public health.
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- 2022
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42. Alternative Complement Pathway Inhibition With Iptacopan for the Treatment of C3 Glomerulopathy-Study Design of the APPEAR-C3G Trial
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Andrew S, Bomback, David, Kavanagh, Marina, Vivarelli, Matthias, Meier, Yaqin, Wang, Nicholas J A, Webb, Angelo J, Trapani, and Richard J H, Smith
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Nephrology - Abstract
Complement 3 glomerulopathy (C3G) is a rare kidney disease characterized by dysregulation of the alternative pathway (AP) of the complement system. About 50% of patients with C3G progress to kidney failure within 10 years of diagnosis. Currently, there are no approved therapeutic agents for C3G. Iptacopan is an oral, first-in-class, potent, and selective inhibitor of factor B, a key component of the AP. In a Phase II study, treatment with iptacopan was associated with a reduction in proteinuria and C3 deposit scores in C3G patients with native and transplanted kidneys, respectively.APPEAR-C3G (NCT04817618) is a randomized, double-blind, and placebo-controlled Phase III study to evaluate the efficacy and safety of iptacopan in C3G patients, enrolling 68 adults with biopsy-confirmed C3G, reduced C3 (77 mg/dl), proteinuria ≥1.0 g/g, and estimated glomerular filtration rate (eGFR) ≥30 ml/min per 1.73 mThis study aims to demonstrate the clinical benefits of AP inhibition with iptacopan in C3G.
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- 2022
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43. Healthy Beginnings in Greater High Point
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Mark H. Smith, Mark H. Smith, Mark H. Smith, and Mark H. Smith
- Abstract
This study was done by epidemiologist Mark H. Smith, Ph.D., as part of the Foundation for a Healthy Highpoint's Healthy Beginnings strategic initiative. The initiative, which has resulted in $3 million in funding to 12 local organizations, is focused on reducing unintended pregnancies and supporting healthy pregnancies and early child development. It uses data from the North Carolina State Center for Health Statistics and overall finds that more work remains to address maternal and child health disparities in Greater High Point.Trends were analyzed for the Greater High Point area, including zip codes 27260, 27262, 27263, 27265, 27282, and 27370. The study also summarizes and provides comparison data for all of Guilford County and North Carolina and trends between 2010 and 2020 for teen pregnancy rates, pre-term births, low birthweight, and infant mortality.
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- 2022
44. Methods of the 7 th National Audit Project ( <scp>NAP7</scp> ) of the Royal College of Anaesthetists: peri‐operative cardiac arrest
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A. D. Kane, R. A. Armstrong, E. Kursumovic, T. M. Cook, F. C. Oglesby, L. Cortes, I. K. Moppett, S. R. Moonesinghe, S. Agarwal, D. C. Bouch, J. Cordingley, M. T. Davies, J. Dorey, S. J. Finney, G. Kunst, D. N. Lucas, G. Nickols, R. Mouton, J. P. Nolan, B. Patel, V. J. Pappachan, F. Plaat, K. Samuel, B. R. Scholefield, J. H. Smith, L. Varney, C. Vindrola‐Padros, S. Martin, E. C. Wain, S. W. Kendall, S. Ward, S. Drake, J. Lourtie, C. Taylor, and J. Soar
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Anesthesiology and Pain Medicine - Abstract
Cardiac arrest in the peri-operative period is rare but associated with significant morbidity and mortality. Current reporting systems do not capture many such events, so there is an incomplete understanding of incidence and outcomes. As peri-operative cardiac arrest is rare, many hospitals may only see a small number of cases over long periods, and anaesthetists may not be involved in such cases for years. Therefore, a large-scale prospective cohort is needed to gain a deep understanding of events leading up to cardiac arrest, management of the arrest itself and patient outcomes. Consequently, the Royal College of Anaesthetists chose peri-operative cardiac arrest as the 7th National Audit Project topic. The study was open to all UK hospitals offering anaesthetic services and had a three-part design. First, baseline surveys of all anaesthetic departments and anaesthetists in the UK, examining respondents' prior peri-operative cardiac arrest experience, resuscitation training and local departmental preparedness. Second, an activity survey to record anonymised details of all anaesthetic activity in each site over 4 days, enabling national estimates of annual anaesthetic activity, complexity and complication rates. Third, a case registry of all instances of peri-operative cardiac arrest in the UK, reported confidentially and anonymously, over 1 year starting 16 June 2021, followed by expert review using a structured process to minimise bias. The definition of peri-operative cardiac arrest was the delivery of five or more chest compressions and/or defibrillation in a patient having a procedure under the care of an anaesthetist. The peri-operative period began with the World Health Organization 'sign-in' checklist or first hands-on contact with the patient and ended either 24 h after the patient handover (e.g. to the recovery room or intensive care unit) or at discharge if this occured earlier than 24 h. These components described the epidemiology of peri-operative cardiac arrest in the UK and provide a basis for developing guidelines and interventional studies.
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- 2022
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45. Costs and Cost-Effectiveness of Implementing a Digital Diabetes Prevention Program in a Large, Integrated Health System
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David H Smith, Maureen O’Keeffe-Rosetti, Stephanie L Fitzpatrick, Meghan Mayhew, Alison J Firemark, Inga Gruß, Denis B Nyongesa, Ning Smith, John F Dickerson, Victor J Stevens, William M Vollmer, and Stephen P Fortmann
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Glycated Hemoglobin ,Diabetes Mellitus, Type 2 ,Delivery of Health Care, Integrated ,Cost-Benefit Analysis ,Weight Loss ,Humans ,General Medicine ,Original Research - Abstract
BACKGROUND: The Diabetes Prevention Program (DPP) has been translated into digital formats. We report an economic evaluation of a digital DPP implemented in a large, integrated health care system. METHODS: Patients (n = 4148) were invited to participate in digital DPP based on clinical characteristics (HbA1c 5.7%–6.4% and body mass index ≥ 30 kg/m(2)) assessed using electronic medical record data. Using a propensity score we matched (1:1) enrolled and not enrolled patients for a total of 784. We identified high-risk patients (ie, above the 50th percentile of risk; n = 202) by calculating each patient’s 2-year of developing diabetes. We report the cost of the intervention and the costs of medical care over 12- and 24-month follow-up, and the incremental cost-effectiveness ratio as the cost per additional kilogram weight loss at 24 months. RESULTS: At 12 months, enrolled patients had lower total costs ($6,926, 95% CI $5,681–$8,171) than not enrolled patients ($7,538, 95% CI $6,293–$8,783). This pattern attenuated slightly at 24 months (enrolled = $16,255, 95% CI $14,097–$18,412; not enrolled = $16,688, 95% CI $14,531–$18,846). We found an incremental cost-effectiveness ratio of $81.92 per additional kilogram weight loss. For high-risk patients, the digital DPP group had, on average, lower costs and greater weight loss. We found a 55% chance of the digital DPP program being cost-effective at a willingness-to-pay of $150 per additional kilogram of weight loss; at the same willingness-to-pay, there is a 60% chance in the high-risk subgroup. Limitations include the nonrandomized design and potential volunteer bias. CONCLUSION: Digital DPP had a favorable cost-effectiveness profile compared to other lifestyle interventions.
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- 2022
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46. Novel and Structurally Diversified Bacterial DNA Gyrase Inhibitors Discovered through a Fluorescence-Based High-Throughput Screening Assay
- Author
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Eddy E. Alfonso, Zifang Deng, Daniel Boaretto, Becky L. Hood, Stefan Vasile, Layton H. Smith, Jeremy W. Chambers, Prem Chapagain, and Fenfei Leng
- Subjects
Pharmacology ,Pharmacology (medical) - Abstract
Bacterial DNA gyrase, a type IIA DNA topoisomerase that plays an essential role in bacterial DNA replication and transcription, is a clinically validated target for discovering and developing new antibiotics. In this article, based on a supercoiling-dependent fluorescence quenching (SDFQ) method, we developed a high-throughput screening (HTS) assay to identify inhibitors targeting bacterial DNA gyrase and screened the National Institutes of Health's Molecular Libraries Small Molecule Repository library containing 370,620 compounds in which 2891 potential gyrase inhibitors have been identified. According to these screening results, we acquired 235 compounds to analyze their inhibition activities against bacterial DNA gyrase using gel- and SDFQ-based DNA gyrase inhibition assays and discovered 155 new bacterial DNA gyrase inhibitors with a wide structural diversity. Several of them have potent antibacterial activities. These newly discovered gyrase inhibitors include several DNA gyrase poisons that stabilize the gyrase-DNA cleavage complexes and provide new chemical scaffolds for the design and synthesis of bacterial DNA gyrase inhibitors that may be used to combat multidrug-resistant bacterial pathogens. Additionally, this HTS assay can be applied to screen inhibitors against other DNA topoisomerases.
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- 2022
- Full Text
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47. Guiding Kidney Transplantation Candidates for Effective Weight Loss: A Clinical Cohort Study
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Aleksandra Kukla, Tayyab Diwan, Byron H. Smith, Maria L. Collazo-Clavell, Elizabeth C. Lorenz, Matthew Clark, Karen Grothe, Aleksandar Denic, Walter D. Park, Sukhdeep Sahi, Carrie A. Schinstock, Hatem Amer, Naim Issa, Andrew J. Bentall, Patrick G. Dean, Yogish C. Kudva, Manpreet Mundi, and Mark D. Stegall
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General Medicine - Published
- 2022
- Full Text
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48. Human Papillomavirus-Associated Oral Cavity Squamous Cell Carcinoma: An Entity with Distinct Morphologic and Clinical Features
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James S. Lewis, Molly H. Smith, Xiaowei Wang, Fangjia Tong, Mitra Mehrad, and Krystle A. Lang-Kuhs
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Oncology ,Otorhinolaryngology ,Pathology and Forensic Medicine - Abstract
HPV-associated oral cavity squamous cell carcinoma (SCC) is not well-characterized in the literature, and also has a clinical significance that is poorly understood.We gathered a cohort of oral cavity (OC) SCC with nonkeratinizing morphology, either in the invasive or in situ carcinoma (or both), tested for p16 by immunohistochemistry and high risk HPV E6/E7 mRNA by RTPCR (reference standard for transcriptionally-active high risk HPV) and gathered detailed morphologic and clinicopathologic data.Thirteen patients from two institutions were proven to be HPV-associated by combined p16 and high risk HPV mRNA positivity. All 13 patients (100%) were males, all were heavy smokers (average 57 pack/year), and most were active drinkers (9/11 or 81.8%). All 13 (100%) involved the tongue and/or floor of mouth. All had nonkeratinizing features, but maturing squamous differentiation varied widely (0-90%; mean 37.3%). Nonkeratinizing areas had high N:C ratios and larger nests, frequently with pushing borders, and minimal (or no) stromal desmoplasia. The carcinoma in situ, when present, was Bowenoid/nonkeratinizing with cells with high N:C ratios, full thickness loss of maturation, and abundant apoptosis and mitosis. HPV was type 16 in 11 patients (84.6%) and type 33 in two (15.4%). Nine patients had treatment data available. These underwent primary surgical resection with tumors ranging from 1.6 to 5.2 cm. Most had bone invasion (6/9-66.7% were T4a tumors), and most (6/9-66.7%) had extensive SCC in situ with all 6 of these patients having final margins positive for in situ carcinoma.HPV-associated OCSCC is an uncommon entity that shows certain distinct clinical and pathologic features. Recognition of these features may help pathologic diagnosis and could potentially help guide clinical management.
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- 2022
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49. Genomic landscape of Epstein–Barr virus-positive extranodal marginal zone lymphomas of mucosa-associated lymphoid tissue
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Bryan Rea, Yen-Chun Liu, Alanna Maguire, Lorinda A. Soma, Chris M. Bacon, Michael G. Bayerl, Molly H. Smith, Michael T. Barrett, Steven H. Swerdlow, and Sarah E. Gibson
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Pathology and Forensic Medicine - Published
- 2022
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50. Ground and In-Flight Calibration of the OSIRIS-REx Camera Suite
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D. R. Golish, C. Drouet d’Aubigny, B. Rizk, D. N. DellaGiustina, P. H. Smith, K. Becker, N. Shultz, T. Stone, M. K. Barker, E. Mazarico, E. Tatsumi, R. W. Gaskell, L. Harrison, C. Merrill, C. Fellows, B. Williams, S. O’Dougherty, M. Whiteley, J. Hancock, B. E. Clark, C. W. Hergenrother, and D. S. Lauretta
- Published
- 2020
- Full Text
- View/download PDF
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