1,512 results on '"A. W. Tyler"'
Search Results
2. The organization of individually mapped structural and functional semantic networks in aging adults
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W. Tyler Ketchabaw, Andrew T. DeMarco, Sachi Paul, Elizabeth Dvorak, Candace van der Stelt, and Peter E. Turkeltaub
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Histology ,General Neuroscience ,Anatomy - Published
- 2022
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3. Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous
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Ava Ghezelayagh, Richard C. Harrington, Edward D. Burress, Matthew A. Campbell, Janet C. Buckner, Prosanta Chakrabarty, Jessica R. Glass, W. Tyler McCraney, Peter J. Unmack, Christine E. Thacker, Michael E. Alfaro, Sarah T. Friedman, William B. Ludt, Peter F. Cowman, Matt Friedman, Samantha A. Price, Alex Dornburg, Brant C. Faircloth, Peter C. Wainwright, and Thomas J. Near
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Ecology ,Ecology, Evolution, Behavior and Systematics - Published
- 2022
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4. Midwinter Dry Spells Amplify Post‐Fire Snowpack Decline
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Benjamin J. Hatchett, Arielle L. Koshkin, Kristen Guirguis, Karl Rittger, Anne W. Nolin, Anne Heggli, Alan M. Rhoades, Amy E. East, Erica R. Siirila‐Woodburn, W. Tyler Brandt, Alexander Gershunov, and Kayden Haleakala
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Geophysics ,General Earth and Planetary Sciences - Published
- 2023
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5. Spatial and Temporal Variation in Toxicity and Composition of Hydraulic Fracturing Flowback and Produced Water
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Connor B. Stewart, Hannah M. Lowes, W. Tyler Mehler, Katherine N. Snihur, Shannon L. Flynn, Daniel Alessi, and Tamzin A. Blewett
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- 2023
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6. Watershed memory amplified the Oroville rain-on-snow flood of February 2017
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Kayden Haleakala, W Tyler Brandt, Benjamin J Hatchett, Dongyue Li, Dennis P Lettenmaier, and Mekonnen Gebremichael
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Mountain snowpacks are transitioning to experience less snowfall and more rainfall as the climate warms, creating more persistent low- to no-snow conditions. This precipitation shift also invites more high-impact rain-on-snow (ROS) events, which have historically yielded many of the largest and most damaging floods in the western United States. One such sequence of events preceded the evacuation of 188,000 residents below the already-damaged Oroville Dam spillway in February 2017 in California’s Sierra Nevada. Prior studies have suggested that snowmelt during ROS dramatically amplified reservoir inflows. However, we present evidence that snowmelt may have played a smaller role than previously documented (augmenting terrestrial water inputs by 21%). A series of hydrologic model experiments and subdaily snow, soil, streamflow, and hydrometeorological measurements demonstrate that direct, “passive” routing of rainfall through snow, and increasingly efficient runoff driven by gradually wetter soils can alternatively explain the extreme runoff totals. Our analysis reveals a crucial link between frequent winter storms and a basin’s hydrologic response—emphasizing the role of soil moisture “memory” of within-season storms in priming impactful flood responses. Given the breadth in plausible ROS flood mechanisms, this case study underscores a need for more detailed measurements of soil moisture along with in-storm changes to snowpack structure, extent, energy balance, and precipitation phase to address ROS knowledge gaps associated with current observational limits. Sharpening our conceptual understanding of basin-scale ROS better equips water managers moving forward to appropriately classify threat levels, which are projected to increase throughout the mid-21st century.
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- 2022
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7. Impacts of Climate Change on Groundwater Availability and Spring Flows: Observations from the Highly Productive Medicine Lake Highlands/Fall River Springs Aquifer System
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Shawn J. Wheelock, Scott W. Tyler, Lauren K Mancewicz, L. Davisson, Erick R. Burns, and Simon R. Poulson
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Hydrology ,geography ,geography.geographical_feature_category ,Ecology ,Spring (hydrology) ,Environmental science ,Climate change ,Aquifer ,Groundwater recharge ,Groundwater ,Earth-Surface Processes ,Water Science and Technology - Published
- 2021
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8. Global emergency medicine: A scoping review of the literature from 2020
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Indi, Trehan, Sean M, Kivlehan, Kamna S, Balhara, Joseph, Bonney, Braden J, Hexom, Amelia Y, Pousson, Nana S A, Quao, Megan M, Rybarczyk, Anand, Selvam, Benjamin D, Nicholson, Nidhi, Bhaskar, Torben K, Becker, and W Tyler, Winders
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Emergency Medical Services ,medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,SARS-CoV-2 ,business.industry ,MEDLINE ,COVID-19 ,General Medicine ,Grey literature ,Global Health ,Original research ,Automatic summarization ,Quantitative research ,Emergency medicine ,Emergency Medicine ,medicine ,Humans ,Narrative ,business ,Qualitative research - Abstract
Objective To identify, screen, highlight, review, and summarize some of the most rigorously conducted and impactful original research and review articles in global emergency medicine (EM) published in 2020 in the peer-reviewed and gray literature. Methods A broad systematic search of peer-reviewed publications related to global EM indexed on PubMed and in the gray literature was conducted. The titles and abstracts of the articles on this list were screened by members of the Global Emergency Medicine Literature Review team to identify those that met our criteria of original research or review articles in the domains of Disaster and Humanitarian Response, Emergency Care in Resource-Limited Settings, and Emergency Medicine Development. Those articles that met these screening criteria were then scored using one of three scoring templates appropriate to the article type. Those articles that scored in the top 5% then underwent in-depth narrative summarization. Results The 2020 GEMLR search initially identified 35,970 articles, more than 50% more than last year's search. From these, 364 were scored based on their full text. Nearly three-fourths of the scored articles constituted original research, of which nearly three-fourths employed quantitative research methods. Nearly 10% of the articles identified this year were directly related to COVID-19. Research involving Emergency Care in Resource-Limited Settings again constituted most of the articles in this year's review, accounting for more than 60% of the literature scored. A total of 20 articles underwent in-depth narrative critiques. Conclusions The number of studies relevant to global EM identified by our search was very similar to last year. Revisions to our methodology to identify a broader range of research were successful in identifying more qualitative research and studies related to Disaster and Humanitarian Response. The number of COVID-19-related articles is likely to continue to increase in subsequent years.
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- 2021
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9. Midwinter dry spells amplify post-fire snowpack decline
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Benjamin J Hatchett, Arielle Koshkin, Kristen Guirguis, Karl Rittger, Anne Nolin, Anne Heggli, Alan M. Rhoades, Amy E East, Erica R. Siirila-Woodburn, W. Tyler Brandt, Alexander Gershunov, and Kayden Haleakala
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- 2022
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10. Phosphorylation‐dependent control of Activity‐regulated cytoskeleton‐associated protein (Arc) protein by TNIK
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Judith A. Steen, Jasmin Lalonde, Debasis Patnaik, Alicyia Walczyk-Mooradally, Jennifer Holborn, Hendrik Wesseling, Steffen P. Graether, Nicholas J. Brandon, Stephen J. Haggarty, Karamjeet K. Singh, and Marshall W. Tyler
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0301 basic medicine ,Arc (protein) ,Chemistry ,Mutant ,Mutagenesis (molecular biology technique) ,Biochemistry ,Cell biology ,Serine ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,030104 developmental biology ,0302 clinical medicine ,TNIK ,Phosphorylation ,Cytoskeleton ,Immediate early gene ,030217 neurology & neurosurgery - Abstract
Activity-regulated cytoskeleton-associated protein (Arc) is an immediate early gene product that support neuroplastic changes important for cognitive function and memory formation. As a protein with homology to the retroviral Gag protein, a particular characteristic of Arc is its capacity to self-assemble into virus-like capsids that can package mRNAs and transfer those transcripts to other cells. Although a lot has been uncovered about the contributions of Arc to neuron biology and behavior, very little is known about how different functions of Arc are coordinately regulated both temporally and spatially in neurons. The answer to this question we hypothesized must involve the occurrence of different protein post-translational modifications acting to confer specificity. In this study, we used mass spectrometry and sequence prediction strategies to map novel Arc phosphorylation sites. Our approach led us to recognize serine 67 (S67) and threonine 278 (T278) as residues that can be modified by TNIK, which is a kinase abundantly expressed in neurons that shares many functional overlaps with Arc and has, along with its interacting proteins such as the NMDA receptor, and been implicated as a risk factor for psychiatric disorders. Furthermore, characterization of each residue using site-directed mutagenesis to create S67 and T278 mutant variants revealed that TNIK action at those amino acids can strongly influence Arc's subcellular distribution and self-assembly as capsids. Together, our findings reveal an unsuspected connection between Arc and TNIK. Better understanding of the interplay between these two proteins in neuronal cells could lead to new insights about apparition and progression of psychiatric disorders. Cover Image for this issue: https://doi.org/10.1111/jnc.15077.
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- 2021
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11. Delayed Adaptive Radiation among New Zealand Stream Fishes: Joint Estimation of Divergence Time and Trait Evolution in a Newly Delineated Island Species Flock
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Matthew D. McGee, Peter J. Unmack, Christine E. Thacker, W. Tyler McCraney, and James J. Shelley
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0106 biological sciences ,0301 basic medicine ,Genetic Speciation ,Lineage (evolution) ,Gobiomorphus ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,Eleotridae ,Monophyly ,Rivers ,Adaptive radiation ,Genetic algorithm ,Genetics ,Animals ,Spotlight ,Clade ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Extinction ,biology ,AcademicSubjects/SCI01130 ,Fishes ,Bayes Theorem ,biology.organism_classification ,Biological Evolution ,030104 developmental biology ,Evolutionary biology ,New Zealand - Abstract
Adaptive radiations are generally thought to occur soon after a lineage invades a region offering high levels of ecological opportunity. However, few adaptive radiations beyond a handful of exceptional examples are known, so a comprehensive understanding of their dynamics is still lacking. Here, we present a novel case of an island species flock of freshwater fishes with a radically different tempo of adaptive history than that found in many popular evolutionary model systems. Using a phylogenomic data set combined with simultaneous Bayesian estimation of divergence times and trait-based speciation and extinction models, we show that the New Zealand Gobiomorphus gudgeons comprise a monophyletic assemblage, but surprisingly, the radiation did not fully occupy freshwater habitats and explosively speciate until more than 10 myr after the lineage invaded the islands. This shift in speciation rate was not accompanied by an acceleration in the rate of morphological evolution in the freshwater crown clade relative to the other species, but is correlated with a reduction in head pores and scales as well as an increase in egg size. Our results challenge the notion that clades always rapidly exploit ecological opportunities in the absence of competing lineages. Instead, we demonstrate that adaptive radiation can experience a slow start before undergoing accelerated diversification and that lineage and phenotypic diversification may be uncoupled in young radiations. [Adaptive radiation; Eleotridae; freshwater; Gobiomorphus; New Zealand.]
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- 2021
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12. Freshwater Sediment Toxicity Evaluation from Meso-Scale Spill Tests of Diluted Bitumen and Conventional Crude
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W. Tyler Mehler, Qin Xin, Marina Giacomin, Heather D. Dettman, and Greg G. Goss
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Health, Toxicology and Mutagenesis ,Environmental Chemistry ,Animals ,Oil and Gas Fields ,Fresh Water ,Polycyclic Aromatic Hydrocarbons ,Water Pollutants, Chemical ,Alberta - Abstract
Oil and gas development and transportation in many areas of the world, such as the oil sands region of Alberta, Canada, are heavily monitored to minimize the environmental impacts of development and the risk of oil spills. However, oil spills to aquatic environments still occur. Although the science of oil spills has received considerable attention of late, uncertainty still remains in evaluating the fate and transport of oil spills as well as the effects of those spills on aquatic biota. Experiments using meso-scale spill tanks were used to examine the physical and chemical behavior of two types of oil, conventional crude (CC) and diluted bitumen (DB), under similar environmentally relevant scenarios (i.e., volume of spill, temperature, duration, wave action, and presence of river sediment). In addition, biological impact assessments via sediment toxicity testing collected from the oil spill tests were conducted. Sediments were evaluated for acute toxicity using three standard sediment test species: Hyalella azteca, Lumbriculus variegatus, and Chironomus dilutus. Sediments collected from the CC simulated spill showed a higher level of acute toxicity than sediments collected from spills with DB. Higher toxicity in the CC-contaminated sediment was supported by higher concentrations of low molecular weight polycyclic aromatic hydrocarbons (PAHs) when compared with the DB-contaminated sediment, while the remaining PAH profile was similar between the contaminated sediments. The use of a meso-scale spill tank in combination with sediment bioassays allowed for the evaluation of oil spills under controlled and environmentally relevant conditions (e.g., nearshore high sediment loading river), and in turn provides assessors with additional information to identify the appropriate mitigation and remediation efforts needed in the event of future spills. Environ Toxicol Chem 2022;41:2797-2807. © 2022 SETAC.
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- 2022
13. A Live Experience of Four-Dimensional Structure
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Christopher W. Tyler
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media_common.quotation_subject ,Structure (category theory) ,Eye movement ,Experimental and Cognitive Psychology ,Sensory Systems ,Ophthalmology ,Artificial Intelligence ,Perception ,Humans ,Attention ,3d perception ,Selective attention ,Psychology ,Necker cube ,Cognitive psychology ,media_common - Abstract
Selective attention is well known for 2D patterns and perceptual alternations are well established for 3D structures projected into 2D, such as the Necker cube. Here, these concepts are extended to the spatial fourth dimension in the form of the mathematical structure of the 4D hypercube. In orthographic projection, its 2D outline figure has multiple and highly dynamic percepts of up to 28 different 3D interpretations, which correspond to local 3D views of the 4D hypercube. Thus, the spontaneous operations of perceptual processing can provide direct insight into conceptual structure in the fourth dimension.
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- 2021
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14. Thomas Hutchinson's Enemies List: Unmasking Conspiracy and Wickedness in the Patriot Cause
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John W. Tyler
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History ,Literature and Literary Theory ,media_common.quotation_subject ,Philosophy ,Law ,Wickedness ,Suspect ,Independence ,media_common - Abstract
Conspiracy theories in American politic are as American as apple pie. Bernard Bailyn first noted in 1965 the tendency of leading advocates of independence to suspect a design by of wicked ministers of the king. What has been less commented upon was the tendency of Thomas Hutchinson and other leading loyalists to charge their opponents with similar evil doing.
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- 2020
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15. The Intersection of Visual Science and Art in Renaissance Italy
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Christopher W. Tyler
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Science ,media_common.quotation_subject ,Experimental and Cognitive Psychology ,Virtual reality ,050105 experimental psychology ,Visual arts ,03 medical and health sciences ,0302 clinical medicine ,Artificial Intelligence ,Perception ,Humans ,0501 psychology and cognitive sciences ,3d perception ,Vision, Ocular ,History, 15th Century ,media_common ,05 social sciences ,Perspective (graphical) ,The Renaissance ,Art ,Sensory Systems ,Ophthalmology ,Vision science ,Italy ,History, 16th Century ,Cues ,Depth perception ,030217 neurology & neurosurgery - Abstract
In the time of the Renaissance, a major aspect of vision science was understanding how spatial information projected to the viewpoint of the observer, that is, visual perspective, which is one of the primary cues to depth perception. Perspective representation was thus an early form of virtual reality. Although accurate perspective representation was developed earlier in the 15th century, the first analytic perspective scheme was developed by Piero della Francesca, whose chef d’oeuvre is in the Church of San Francesco, Arezzo, in which the present lecture took place. The focus of the lecture was to evaluate some of the contributions of Piero della Francesca and his 15th-century contemporaries to the visual science, art and symbolism of his era, and its significance for the perception of depth structure from two-dimensional images.
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- 2020
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16. Ocean variability beneath Thwaites Eastern Ice Shelf driven by the Pine Island Bay Gyre strength
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Tiago S, Dotto, Karen J, Heywood, Rob A, Hall, Ted A, Scambos, Yixi, Zheng, Yoshihiro, Nakayama, Shuntaro, Hyogo, Tasha, Snow, Anna K, Wåhlin, Christian, Wild, Martin, Truffer, Atsuhiro, Muto, Karen E, Alley, Lars, Boehme, Guilherme A, Bortolotto, Scott W, Tyler, and Erin, Pettit
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West Antarctic ice-shelf thinning is primarily caused by ocean-driven basal melting. Here we assess ocean variability below Thwaites Eastern Ice Shelf (TEIS) and reveal the importance of local ocean circulation and sea-ice. Measurements obtained from two sub-ice-shelf moorings, spanning January 2020 to March 2021, show warming of the ice-shelf cavity and an increase in meltwater fraction of the upper sub-ice layer. Combined with ocean modelling results, our observations suggest that meltwater from Pine Island Ice Shelf feeds into the TEIS cavity, adding to horizontal heat transport there. We propose that a weakening of the Pine Island Bay gyre caused by prolonged sea-ice cover from April 2020 to March 2021 allowed meltwater-enriched waters to enter the TEIS cavity, which increased the temperature of the upper layer. Our study highlights the sensitivity of ocean circulation beneath ice shelves to local atmosphere-sea-ice-ocean forcing in neighbouring open oceans.
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- 2022
17. Patterns of Phenotypic Evolution Associated with Marine/Freshwater Transitions in Fishes
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Victor de Brito, Ricardo Betancur-R, Michael D Burns, Thaddaeus J Buser, Kevin W Conway, João Pedro Fontenelle, Matthew A Kolmann, W Tyler McCraney, Christine E Thacker, and Devin D Bloom
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Fishes ,Animals ,Animal Science and Zoology ,Fresh Water ,Plant Science ,Ecosystem ,Phylogeny - Abstract
Evolutionary transitions between marine and freshwater ecosystems have occurred repeatedly throughout the phylogenetic history of fishes. The theory of ecological opportunity predicts that lineages that colonize species-poor regions will have greater potential for phenotypic diversification than lineages invading species-rich regions. Thus, transitions between marine and freshwaters may promote phenotypic diversification in trans-marine/freshwater fish clades. We used phylogenetic comparative methods to analyze body size data in nine major fish clades that have crossed the marine/freshwater boundary. We explored how habitat transitions, ecological opportunity, and community interactions influenced patterns of phenotypic diversity. Our analyses indicated that transitions between marine and freshwater habitats did not drive body size evolution, and there are few differences in body size between marine and freshwater lineages. We found that body size disparity in freshwater lineages is not correlated with the number of independent transitions to freshwaters. We found a positive correlation between body size disparity and overall species richness of a given area, and a negative correlation between body size disparity and diversity of closely related species. Our results indicate that the diversity of incumbent freshwater species does not restrict phenotypic diversification, but the diversity of closely related taxa can limit body size diversification. Ecological opportunity arising from colonization of novel habitats does not seem to have a major effect in the trajectory of body size evolution in trans-marine/freshwater clades. Moreover, competition with closely related taxa in freshwaters has a greater effect than competition with distantly related incumbent species.
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- 2022
18. Comparison of intrafractional motion with two frameless immobilization systems in surface-guided intracranial stereotactic radiosurgery
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Chunhui Han, Arya Amini, Jeffrey Y.C. Wong, Jieming Liang, Kun Qing, W. Tyler Watkins, Sean Zhang, Terence M. Williams, and An Liu
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Immobilization ,Radiation ,Radiotherapy Planning, Computer-Assisted ,Humans ,Radiology, Nuclear Medicine and imaging ,Radiosurgery ,Instrumentation ,Patient Positioning ,Retrospective Studies - Abstract
The aim of this study is to compare intrafractional motion using two commercial non-invasive immobilization systems for linac-based intracranial stereotactic radiosurgery (SRS) under guidance with a surface-guided radiotherapy (SGRT) system.Twenty-one patients who received intracranial SRS were retrospectively selected. Ten patients were immobilized with a vacuum fixation biteplate system, while 11 patients were immobilized with an open-face mask system. A setup margin of 1 mm was used in treatment planning. Real-time surface motion data in 37 treatment fractions using the vacuum fixation system and 44 fractions using the open-face mask were recorded by an SGRT system. Variances of intrafractional motion along three translational directions and three rotational directions were compared between the two immobilization techniques with Levene's tests. Intrafractional motion variation over time during treatments was also evaluated.Using the vacuum fixation system, the average and standard deviations of the shifts were 0.01 ± 0.18 mm, -0.06 ± 0.30 mm, and 0.02 ± 0.26 mm in the anterior-posterior (AP), superior-inferior (SI), and left-right (LR) directions, and -0.02 ± 0.19°, -0.01 ± 0.13°, and 0.01 ± 0.13° for rotations in yaw, roll, and pitch, respectively; using the open-face mask system, the average and standard deviations of the shifts were -0.06 ± 0.20 mm, -0.02 ± 0.35 mm, and 0.01 ± 0.40 mm in the AP, SI, and LR directions, and were 0.05 ± 0.23°, 0.02 ± 0.21°, and 0.00 ± 0.16° for rotations in yaw, roll, and pitch, respectively. There was a significant increase in intrafractional motion variance over time during treatments.Patients with the vacuum fixation system had significantly smaller intrafractional motion variation compared to those with the open-face mask system. Using intrafractional motion techniques such as surface imaging system is recommended to minimize dose deviation due to intrafractional motion. The increase in intrafractional motion over time indicates clinical benefits with shorter treatment time.
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- 2022
19. Phylogeny, diversification, and biogeography of a hemiclonal hybrid system of native Australian freshwater fishes (Gobiiformes: Gobioidei: Eleotridae: Hypseleotris)
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Christine E. Thacker, James J. Shelley, W. Tyler McCraney, Mark Adams, Michael P. Hammer, and Peter J. Unmack
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Carps ,Australia ,Animals ,Bayes Theorem ,Fresh Water ,General Medicine ,Phylogeny ,Perciformes - Abstract
Background Carp gudgeons (genus Hypseleotris) are a prominent part of the Australian freshwater fish fauna, with species distributed around the western, northern, and eastern reaches of the continent. We infer a calibrated phylogeny of the genus based on nuclear ultraconserved element (UCE) sequences and using Bayesian estimation of divergence times, and use this phylogeny to investigate geographic patterns of diversification with GeoSSE. The southeastern species have hybridized to form hemiclonal lineages, and we also resolve relationships of hemiclones and compare their phylogenetic placement in the UCE phylogeny with a hypothesis based on complete mitochondrial genomes. We then use phased SNPs extracted from the UCE sequences for population structure analysis among the southeastern species and hemiclones. Results Hypseleotris cyprinoides, a widespread euryhaline species known from throughout the Indo-Pacific, is resolved outside the remainder of the species. Two Australian radiations comprise the bulk of Hypseleotris, one primarily in the northwestern coastal rivers and a second inhabiting the southeastern region including the Murray–Darling, Bulloo-Bancannia and Lake Eyre basins, plus coastal rivers east of the Great Dividing Range. Our phylogenetic results reveal cytonuclear discordance between the UCE and mitochondrial hypotheses, place hemiclone hybrids among their parental taxa, and indicate that the genus Kimberleyeleotris is nested within the northwestern Hypseleotris radiation along with three undescribed species. We infer a crown age for Hypseleotris of 17.3 Ma, date the radiation of Australian species at roughly 10.1 Ma, and recover the crown ages of the northwestern (excluding H. compressa) and southeastern radiations at 5.9 and 7.2 Ma, respectively. Range-dependent diversification analyses using GeoSSE indicate that speciation and extinction rates have been steady between the northwestern and southeastern Australian radiations and between smaller radiations of species in the Kimberley region and the Arnhem Plateau. Analysis of phased SNPs confirms inheritance patterns and reveals high levels of heterozygosity among the hemiclones. Conclusions The northwestern species have restricted ranges and likely speciated in allopatry, while the southeastern species are known from much larger areas, consistent with peripatric speciation or allopatric speciation followed by secondary contact. Species in the northwestern Kimberley region differ in shape from those in the southeast, with the Kimberley species notably more elongate and slender than the stocky southeastern species, likely due to the different topographies and flow regimes of the rivers they inhabit.
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- 2022
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20. Self-Regulation of Seat of Attention Into Various Attentional Stances Facilitates Access to Cognitive and Emotional Resources: An EEG Study
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Glenn, Hartelius, Lora T, Likova, and Christopher W, Tyler
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General Psychology - Abstract
This study provides evidence supporting the operation of a novel cognitive process of a somatic seat of attention, or ego-center, whose somatic location is under voluntary control and that provides access to differential emotional resources. Attention has typically been studied in terms of what it is directed toward, but it can also be associated with a localized representation in the body image that is experienced as the source or seat of attention—an aspect that has previously only been studied by subjective techniques. Published studies of this phenomenon under terms such as egocenter or self-location suggest that the seat of attention can be situated in various ways within the experienced body, resulting in what are here referred to as different attentional stances. These studies also provide evidence that changes in attentional stance are associated with differences in cognitive skill, emotional temperament, self-construal, and social and moral attitudes, as well as with access to certain states of consciousness. In the present study, EEG results from multiple trials of each of 11 specific attentional stances confirmed that patterns of neural activity associated with the voluntarily control of attentional stances can be reliably measured, providing evidence for a differential neural substrate underlying the subjective location of the seat of attention. Additionally, brain activation patterns for the attentional stances showed strong correlations with EEG signatures associated with specific positive emotional states and with arousal, confirming that differential locations of the seat of attention can be objectively associated with different emotion states, as implied in previous literature. The ability to directly manage the seat of attention into various attentional stances holds substantial potential for facilitating access to specific cognitive and emotional resources in a new way.
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- 2022
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21. Complementary observations aid identification of the mountain rain-snow transition elevation
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W. Tyler Brandt, Forest Cannon, Ava Cooper, Luca Delle Monache, Kayden Haleakala, Benjamin J Hatchett, Bruce McGurk, Ming Pan, and F. Martin Ralph
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- 2022
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22. The organization of individually mapped structural and functional semantic networks in aging adults
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W Tyler, Ketchabaw, Andrew T, DeMarco, Sachi, Paul, Elizabeth, Dvorak, Candace, van der Stelt, and Peter E, Turkeltaub
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Adult ,Aging ,Brain Mapping ,Brain ,Humans ,Magnetic Resonance Imaging ,Temporal Lobe ,Semantic Web ,Semantics - Abstract
Language function in the brain, once thought to be highly localized, is now appreciated as relying on a connected but distributed network. The semantic system is of particular interest in the language domain because of its hypothesized integration of information across multiple cortical regions. Previous work in healthy individuals has focused on group-level functional connectivity (FC) analyses of the semantic system, which may obscure interindividual differences driving variance in performance. These studies also overlook the contributions of white matter networks to semantic function. Here, we identified semantic network nodes at the individual level with a semantic decision fMRI task in 53 typically aging adults, characterized network organization using structural connectivity (SC), and quantified the segregation and integration of the network using FC. Hub regions were identified in left inferior frontal gyrus. The individualized semantic network was composed of three interacting modules: (1) default-mode module characterized by bilateral medial prefrontal and posterior cingulate regions and also including right-hemisphere homotopes of language regions; (2) left frontal module extending dorsally from inferior frontal gyrus to pre-motor area; and (3) left temporoparietal module extending from temporal pole to inferior parietal lobule. FC within Module3 and integration of the entire network related to a semantic verbal fluency task, but not a matched phonological task. These results support and extend the tri-network semantic model (Xu in Front Psychol 8: 1538 1538, 2017) and the controlled semantic cognition model (Chiou in Cortex 103: 100 116, 2018) of semantic function.
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- 2022
23. Plasticity of the language system in children and adults
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Kelly C. Martin, W. Tyler Ketchabaw, and Peter E. Turkeltaub
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Adult ,Stroke ,Language Disorders ,Neuronal Plasticity ,Aphasia ,Brain ,Humans ,Child ,Magnetic Resonance Imaging ,Article ,Language - Abstract
The language system is perhaps the most unique feature of the human brain's cognitive architecture. It has long been a quest of cognitive neuroscience to understand the neural components that contribute to the hierarchical pattern processing and advanced rule learning required for language. The most important goal of this research is to understand how language becomes impaired when these neural components malfunction or are lost to stroke, and ultimately how we might recover language abilities under these circumstances. Additionally, understanding how the language system develops and how it can reorganize in the face of brain injury or dysfunction could help us to understand brain plasticity in cognitive networks more broadly. In this chapter we will discuss the earliest features of language organization in infants, and how deviations in typical development can-but in some cases, do not-lead to disordered language. We will then survey findings from adult stroke and aphasia research on the potential for recovering language processing in both the remaining left hemisphere tissue and in the non-dominant right hemisphere. Altogether, we hope to present a clear picture of what is known about the capacity for plastic change in the neurobiology of the human language system.
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- 2022
24. Interrater agreement of the HEART score history component: A chart review study
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Alec J. Pawlukiewicz, Matthew R. Geringer, W. Tyler Davis, Daniel R. Nassery, Michael D. April, Matthew J. Streitz, Jessica M. Hyams, Alex W. Martin, Sadie A. Martin, and Joshua J. Oliver
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This study investigated the interrater reliability of the history component of the HEART (history, electrocardiogram, age, risk, troponin) score between physicians in emergency medicine (EM) and internal medicine (IM) at 1 tertiary-care center.We conducted a retrospective, secondary analysis of 60 encounters selected randomly from a database of 417 patients with chest pain presenting from January to June 2016 to an urban tertiary-care center. A total of 4 raters (1 EM attending, 1 EM resident, 1 IM attending, and 1 IM resident) scored the previously abstracted history data from these encounters.The primary outcome was the interrater agreement of HEART score history components, as measured by kappa coefficient, between EM and IM attending physicians. Secondary outcomes included the agreement between attending and resident physicians, overall agreement, pairwise percent agreement, and differences in scores assigned.The kappa value for the EM attending physician and IM attending physician was 0.33 with 55% agreement. Interrater agreement of the other pairs was substantial between EM attending and resident but was otherwise fair to moderate. Percent agreement between the other pairs ranged from 48.3% to 80%. There was a significant difference in scores assigned and the subgroup in which there was disagreement between the raters demonstrated significantly higher scores by the EM attending and resident when compared to the IM attending.This study demonstrates fair agreement between EM and IM attending physicians in the history component of the HEART score with significantly higher scores by the EM attending physician in cases of disagreement at 1 tertiary-care center.
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- 2022
25. The Canonical Deep Neural Network as a Model for Human Symmetry Processing
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Yoram S. Bonneh and Christopher W. Tyler
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History ,Polymers and Plastics ,Business and International Management ,Industrial and Manufacturing Engineering - Published
- 2022
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26. Combined center of rotation of angulation-based leveling osteotomy and tibial tuberosity transposition: An ex vivo mechanical study
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W. Tyler Clough, David L. Dycus, Matthew D. Barnhart, Don A. Hulse, and Alan S. Litsky
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General Veterinary ,Rotation ,Tibia ,Anterior Cruciate Ligament Injuries ,Animals ,Humans ,Anterior Cruciate Ligament ,Stifle ,Biomechanical Phenomena ,Osteotomy - Abstract
To describe the technique of combined center of rotation of angulation (CORA)-based leveling osteotomy (CBLO) with tibial tuberosity transposition (TTT) and to compare the load to failure between CBLO combined with TTT and CBLO or TTT alone.Ex vivo study.Twelve pairs of cadaveric pelvic limbs.Six pairs of cadaveric tibia were tested in each group (CBLO-TTT versus CBLO) and (CBLO-TTT versus TTT) with each limb randomly assigned to a treatment group. Construct stability was determined by applying a tensile force to each patellar tendon until failure occurred. Load at failure and mode of failure were recorded for each specimen.No difference in mean load to failure was identified between CBLO-TTT (897 N) and CBLO alone (943 N) (P = .81). There was also no difference in the mean load to failure between the CBLO-TTT (928 N) and TTT alone (1046 N) (P = .12).Performing a TTT in combination with a CBLO does not weaken the construct failure to load when compared with each procedure performed alone.A combined CBLO and TTT could be considered a viable option for concurrent management of a cranial cruciate ligament deficient stifle and medial patella luxation.
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- 2021
27. A more accurate model of dark-adapted ERG kinetics
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Christopher W. Tyler
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- 2023
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28. Self-regulation of attentional stance facilitates induction of meditative states
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Glenn Hartelius, Lora T. Likova, and Christopher W. Tyler
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- 2023
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29. Multi-level control of adaptive camouflage by European cuttlefish
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Daniel Osorio, François Ménager, Christopher W. Tyler, Anne-Sophie Darmaillacq, University of Sussex, Ethologie animale et humaine (EthoS), Université de Caen Normandie (UNICAEN), Normandie Université (NU)-Normandie Université (NU)-Université de Rennes (UR)-Centre National de la Recherche Scientifique (CNRS), City University London, Smith-Kettlewell Eye Research Institute (SKERI), The Smith-Kettlewell Eye Research Institute, and F.M. was supported by a Doctoral Scholarship of the University of Caen Normandy.
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cuttlefish ,model ,Sepia ,[SDV]Life Sciences [q-bio] ,Decapodiformes ,sensory ,Sepia officinalis ,General Biochemistry, Genetics and Molecular Biology ,[SCCO]Cognitive science ,camouflage ,motor control ,Visual Perception ,Animals ,Cues ,General Agricultural and Biological Sciences - Abstract
International audience; To camouflage themselves on the seafloor, European cuttlefish Sepia officinalis control the expression of about 30 pattern components to produce a range of body patterns.(1) If each component were under independent control, cuttlefish could produce at least 2(30) patterns. To examine how cuttlefish deploy this vast potential, we recorded cuttlefish on seven experimental backgrounds, each designed to resemble a pattern component, and then compared their responses to predictions of two models of sensory control of component expression. The body pattern model proposes that cuttlefish integrate low-level sensory cues to categorize the background and co-ordinate component expression to produce a small number of overall body patterns.(2-4) The feature matching model proposes that each component is expressed in response to one (or more) local visual features, and the overall pattern depends upon the combination of features in the background. Consistent with the feature matching model, six of the backgrounds elicited a specific set of one to four components, whereas the seventh elicited eleven components typical of a disruptive body pattern. This evidence suggests that both modes of control are important, and we suggest how they can be implemented by a recent hierarchical model of the cuttlefish motor system.(5)(,)(6).
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- 2021
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30. Brain trauma impacts retinal processing: photoreceptor pathway interactions in traumatic light sensitivity
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Christopher W. Tyler and Lora T. Likova
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Dark Adaptation ,Sensory Systems ,Ophthalmology ,Photophobia ,Physiology (medical) ,Case-Control Studies ,Brain Injuries, Traumatic ,RC0321 ,Electroretinography ,Retinal Cone Photoreceptor Cells ,Humans ,RE ,Brain Concussion ,Photic Stimulation - Abstract
Background Concussion-induced light sensitivity, or traumatic photalgia, is a lifelong debilitating problem for upwards of 50% of mild traumatic brain injury (mTBI) cases, though of unknown etiology. We employed spectral analysis of electroretinographic (ERG) responses to assess retinal changes in mTBI as a function of the degree of photalgia. Methods The design was a case–control study of the changes in the ERG waveform as a function of level of light sensitivity in individuals who had suffered incidents of mild traumatic brain injury. The mTBI participants were categorized into non-, mild-, and severe-photalgic groups based on their spectral nociophysical settings. Light-adapted ERG responses were recorded from each eye for 200 ms on–off stimulation of three spectral colors (R:red, G:green, and B:blue) and their sum (W:white) at the highest pain-free intensity level for each participant. The requirement of controls for testing hypersensitive individuals at lower light levels was addressed by recording a full light intensity series in the control group. Results Both the b-wave and the photopic negative response (PhNR) were significantly reduced in the non-photalgic mTBI group relative to controls. In the photalgic groups, the main b-wave peak shifted to the timing of the rod b-wave, with reduced amplitude at the timing of the cone response. Conclusion These results suggest the interpretation that the primary etiology of the painful light sensitivity in mTBI is release of the rod pathway from cone-mediated inhibition at high light levels, causing overactivation of the rod pathway.
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- 2021
31. Establishing the Effectiveness of Interventions Provided to First Responders to Prevent and/or Treat Mental Health Effects of Response to a Disaster: A Systematic Review
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W Tyler Winders, Nirma D. Bustamante, Stephanie C. Garbern, Gemlr, Adam C. Levine, Indi Trehan, Corey B. Bills, Maxwell Osei-Ampofo, and Amin Coker
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medicine.medical_specialty ,business.industry ,Mental Disorders ,Emergency Responders ,Public Health, Environmental and Occupational Health ,Psychological intervention ,MEDLINE ,030208 emergency & critical care medicine ,PsycINFO ,Mental health ,Checklist ,Disasters ,03 medical and health sciences ,Critical appraisal ,Mental Health ,0302 clinical medicine ,Family medicine ,Intervention (counseling) ,medicine ,Humans ,030212 general & internal medicine ,business ,Qualitative research - Abstract
Objectives:This review systematically explores the current available evidence on the effectiveness of interventions provided to first responders to prevent and/or treat the mental health effects of responding to a disaster.Methods:A systematic review of Medline, Scopus, PsycINFO, and gray literature was conducted. Studies describing the effectiveness of interventions provided to first responders to prevent and/or treat the mental health effects of responding to a disaster were included. Quality was assessed using the Grading of Recommendations Assessment, Development and Evaluation (GRADE) criteria, and the Critical Appraisal Skills Programme (CASP) checklist.Results:Manuscripts totaling 3869 met the initial search criteria; 25 studies met the criteria for in-depth analysis, including 22 quantitative and 3 qualitative studies; 6 were performed in low- and middle-income countries (LMICs); 18 studies evaluated a psychological intervention; of these, 13 found positive impact, 4 found no impact, and 1 demonstrated worsened symptoms after the intervention. Pre-event trainings decreased psychiatric symptoms in each of the 3 studies evaluating its effectiveness.Conclusions:This review demonstrates that there are likely effective interventions to both prevent and treat psychiatric symptoms in first responders in high-, medium-, and low-income countries.
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- 2020
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32. Hydration of α-UO3following storage under controlled conditions of temperature and relative humidity
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Justin R. Walensky, W. Tyler Mullen, Alison L. Pugmire, Sarah C. Hernandez, Alison L. Tamasi, Marianne P. Wilkerson, Brian L. Scott, Gregory L. Wagner, Andrew T. Nelson, and Elizabeth Sooby
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Materials science ,Analytical chemistry ,010402 general chemistry ,010403 inorganic & nuclear chemistry ,01 natural sciences ,0104 chemical sciences ,Inorganic Chemistry ,Thermogravimetry ,Bond length ,Lattice constant ,Desorption ,Molecule ,Orthorhombic crystal system ,Relative humidity ,Spectroscopy - Abstract
Changes in chemical speciation of uranium oxides following storage under varied conditions of temperature and relative humidity are valuable for characterizing material provenance. In this study, subsamples of high purity α-UO3 were stored under four sets of controlled conditions of temperature and relative humidity over several years, and then measured periodically for chemical speciation. Powder X-ray diffraction (XRD) analysis and extended X-ray absorption fine structure spectroscopy confirm hydration of α-UO3 to a schoepite-like end product following storage under each of the varied storage conditions, but the species formed during exposure to the lower relative humidity and lower temperature condition follows different trends from those formed under the other three storage conditions (high relative humidity with high or low temperatures, and low relative humidity with a high temperature). Thermogravimetry coupled with XRD analysis was carried out to distinguish desorption pathways of water from the hydrated end products. Density functional theory calculations discern changes in the structure of α-UO3 following incorporation of 1, 2 or 3 H2O molecules or 1, 2 or 3 OH groups into the orthorhombic lattice, revealing differences in lattice constants, U-O bond lengths, and U-U distances. The collective results from this analysis are in contrast to analogous studies that report that U3O8 is oxidized and hydrated in air during storage under high relative humidity conditions.
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- 2020
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33. Bias Correction of Airborne Thermal Infrared Observations Over Forests Using Melting Snow
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Steven Pestana, Jessica D. Lundquist, Clare Webster, Adrian A. Harpold, Henry Pai, C. Chris Chickadel, Tihomir S. Kostadinov, and Scott W. Tyler
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Thermal infrared ,Snowmelt ,Calibration ,Environmental science ,Bias correction ,Snow ,Water Science and Technology ,Remote sensing - Published
- 2019
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34. Toxicity in aquatic model species exposed to a temporal series of three different flowback and produced water samples collected from a horizontal hydraulically fractured well
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Daniel S. Alessi, Greg G. Goss, Chenxing Sun, Shannon L. Flynn, Yifeng Zhang, Perrine L. M. Delompré, Erik J. Folkerts, Tamzin A. Blewett, Jonathan W. Martin, and W. Tyler Mehler
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Lumbriculus variegatus ,Health, Toxicology and Mutagenesis ,Daphnia magna ,0211 other engineering and technologies ,02 engineering and technology ,Wastewater ,010501 environmental sciences ,Mass spectrometry ,Models, Biological ,01 natural sciences ,High-performance liquid chromatography ,Aquatic toxicology ,Tandem Mass Spectrometry ,Animals ,Oligochaeta ,Chromatography, High Pressure Liquid ,Zebrafish ,0105 earth and related environmental sciences ,021110 strategic, defence & security studies ,biology ,Hydraulic Fracking ,Chemistry ,Public Health, Environmental and Occupational Health ,General Medicine ,biology.organism_classification ,Total dissolved solids ,Pollution ,Produced water ,6. Clean water ,Daphnia ,13. Climate action ,Oncorhynchus mykiss ,Environmental chemistry ,Toxicity ,Water Pollutants, Chemical - Abstract
In the present study, we compared the toxicity and associated chemical characterizations of flowback and produced water (FPW) collected from a single horizontal hydraulically fractured well at different time points during FPW production. Since few studies on whole mixture toxicity related to FPW exist, our aims were to determine both overall toxicity of the FPW mixture in a suite of organisms (Daphnia magna, Lumbriculus variegatus, Danio rerio, and Oncorhynchus mykiss) and also determine if toxicity changes depending on variation in FPW chemical properties as a function of time sampled (1.33, 72, and 228 h FPW samples collected immediately post-well production onset were analyzed in current study). FPW chemical composition was determined via quadra-pole inductively coupled plasma – mass spectrometry/mass spectrometry (ICP-MS/MS), full-scan high performance liquid chromatography/Orbitrap mass spectrometry (HPLC/Orbitrap-MS), and gas chromatography-mass spectrometry (GC-MS). We observed that FPW sampled later in the production process contained higher ion and total dissolved solids concentrations, whereas the highest concentrations of dissolved organic compounds were observed in the earliest FPW sample analyzed. Toxicity associated with FPW exposure was deemed to be species-specific to a certain extent, but general trends revealed the earliest FPW sampled contained highest toxic potential. Accordingly, we theorize that although the saline conditions of FPW are the foremost toxicological drivers to freshwater organisms, dissolved organics associated with FPW significantly contribute to the overall toxicity of exposed organisms.
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- 2019
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35. Depth Cue Combination: A Quantitative Critique
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Christopher W. Tyler
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Depth Perception ,Computer science ,business.industry ,Bayes Theorem ,Experimental and Cognitive Psychology ,computer.software_genre ,Sensory Systems ,Ophthalmology ,Text mining ,Pattern Recognition, Visual ,Artificial Intelligence ,Visual Perception ,Humans ,Artificial intelligence ,Cues ,business ,computer ,Natural language processing - Published
- 2019
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36. The Discrete-Dual Minimal-Residual Method (DDMRes) for Weak Advection-Reaction Problems in Banach Spaces
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Kristoffer G. van der Zee, Ignacio Muga, and Matthew J. W. Tyler
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Mathematics::Functional Analysis ,Numerical Analysis ,Applied Mathematics ,Computation ,Banach space ,Numerical Analysis (math.NA) ,010103 numerical & computational mathematics ,Weak formulation ,16. Peace & justice ,Lebesgue integration ,01 natural sciences ,Stability (probability) ,Dual (category theory) ,41A65, 65J05, 46B20, 65N12, 65N15, 35L02, 35J25 ,010101 applied mathematics ,Gibbs phenomenon ,Computational Mathematics ,symbols.namesake ,FOS: Mathematics ,symbols ,Applied mathematics ,Mathematics - Numerical Analysis ,0101 mathematics ,Subspace topology ,Mathematics - Abstract
We propose and analyse a minimal-residual method in discrete dual norms for approximating the solution of the advection-reaction equation in a weak Banach-space setting. The weak formulation allows for the direct approximation of solutions in the Lebesgue $L^p$-space, $1, Comment: 31 pages, 9 figures
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- 2019
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37. The Development of an Emergency Medicine Resident Research Program in the United States Military
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Wells Weymouth, Patrick Ng, Justin M Ross, Shane M. Summers, Brit Long, Joshua J. Oliver, Michael D. April, and W. Tyler Davis
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medicine.medical_specialty ,media_common.quotation_subject ,Graduate medical education ,030204 cardiovascular system & hematology ,03 medical and health sciences ,0302 clinical medicine ,Promotion (rank) ,Political science ,medicine ,Humans ,Curriculum ,Accreditation ,media_common ,business.industry ,Research ,Public Health, Environmental and Occupational Health ,Internship and Residency ,030208 emergency & critical care medicine ,General Medicine ,United States ,Scholarship ,Military personnel ,Military Personnel ,Education, Medical, Graduate ,Publishing ,Emergency medicine ,Emergency Medicine ,business ,Graduation - Abstract
Introduction The Accreditation Council for Graduate Medical Education stipulates that residents should participate in scholarly activity. As of 2019 that verbiage will be changed to, “Residents must participate in scholarship.” However, scholarly activity is not clearly defined. We set out to define our graduation research requirement in a measurable way and structure a research curriculum that better prepared residents to conduct scholarly activity. Materials and Methods This study compares resident scholarly output in several categories before and after the initiation of a revised research curriculum and graduation requirement. Scholarly activity was measured by comparing the production of Pubmed Indexed (PMID) publications, online publications, and conference presentations of two Emergency Medicine Residency classes. The intervention class was represented by the class of 2018 which exposed 16 residents to the new curriculum and graduation requirement for the full three years of their residency. The comparison class was represented by the class of 2015 which exposed 16 residents to the old curriculum and old graduation requirement. The old graduation requirement and curriculum were undefined. The new requirement involved two options, participate in original research starting from the process of question formulation and carried through manuscript drafting or publishing at first author PMID of any kind. The new curriculum involved monthly journal clubs, two annual deep dives, and an 8-day Intern Research Course modeled after the Emergency Medicine Basic Research Skills workshop sponsored by the American College of Emergency Physicians. In addition to the new curriculum, several new leadership positions were created at both the staff and resident level that solely focused on the promotion of scholarly activity. In addition to creating a culture within the department that encouraged scholarship, these overlapping leadership positions also helped create continuity in a program that could easily be hampered by frequent staff turnover due to new military assignments and military deployments. Results Resident scholarly activity in the form of PMIDs increased from 4 to 22. The production of online publications was 0 and 12, respectively. There were 2 and 11 conference presentations, respectively. Conclusion Resident scholarly activity increased following the institution of a new research curriculum and graduation requirement.
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- 2019
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38. Watershed-scale mapping of fractional snow cover under conifer forest canopy using lidar
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Kenneth C. McGwire, Thomas H. Painter, Rina Schumer, Rowan Gaffney, Tihomir S. Kostadinov, Adrian A. Harpold, Kat J. Bormann, Mark B. Hausner, and Scott W. Tyler
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Canopy ,Tree canopy ,010504 meteorology & atmospheric sciences ,0208 environmental biotechnology ,Elevation ,Soil Science ,Geology ,02 engineering and technology ,Vegetation ,Snow ,01 natural sciences ,020801 environmental engineering ,Lidar ,Snowmelt ,Environmental science ,Satellite imagery ,Computers in Earth Sciences ,0105 earth and related environmental sciences ,Remote sensing - Abstract
The distribution of snow cover is critical for predicting ecohydrological processes and underpins mountain water supplies in ranges like the Sierra Nevada in the Western United States. Many key water supply areas are covered by montane forests, which have substantial effects on the amount and timing of snowmelt. In-situ observations of snow-forest interactions have limited spatial coverage and remote sensing using optical sensors (e.g. MODIS) cannot observe snow cover below the canopy. In this study, we developed and verified a lidar-based method to detect snow cover under canopy, investigated how fractional snow covered area (fSCA) varies with topography in open versus under canopy areas and developed a correction factor that could be used to improve satellite-derived fSCA products. We developed our new method using three snow-on lidar overflights and verified it with in-situ distributed temperature sensor (DTS) observations at Sagehen Creek watershed in the Sierra Nevada, California, USA. DTS validation of lidar classifications showed excellent agreement at 85–96%, including high agreement and large number of returns in under canopy locations. The lidar-derived fSCA observations generally showed earlier snow disappearance under the canopy than in open positions, which is consistent with relatively warm temperatures and greater longwave radiation. However, in contrast to expectations, areas with high solar exposure (i.e. high southwestness) exhibited higher fSCA under the canopy. Results indicated that the k factor (the ratio of under canopy fSCA to open fSCA) varied systematically with southwestness and elevation. Using this factor to correct the study domain fSCA indicated that the typical assumption that k = 1 could lead to an up to ~0.05 bias (in fSCA units) towards overestimation. However, within 10 and 100-m individual pixels the fSCA overprediction bias can be 25–30% for higher fSCA values. Although uncertainty would be reduced using higher snow-on lidar point densities, our method shows promise to improve the typical assumption that snow disappearance is identical in under the canopy and in the open (k = 1). Future applications of our lidar-based method at different sites with varying climate, topography and vegetation structure has the dual potential to expand understanding of snow-forest interactions in complex terrain and improve operational fSCA products.
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- 2019
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39. A multifaceted quality improvement intervention to improve management of alcohol withdrawal on a general medicine ward: impact on benzodiazepine use
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Jason Carr, Peter M. Yarbrough, W. Tyler Jenson, Richard S. Rose, David DeFrancisco, and Stacy A. Johnson
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medicine.medical_specialty ,Quality management ,medicine.drug_class ,Medicine (miscellaneous) ,Alcohol ,Alcohol Withdrawal Delirium ,chemistry.chemical_compound ,Benzodiazepines ,Seizures ,Intervention (counseling) ,medicine ,Humans ,Retrospective Studies ,Benzodiazepine ,business.industry ,Retrospective cohort study ,General Medicine ,Quality Improvement ,humanities ,Substance Withdrawal Syndrome ,Psychiatry and Mental health ,Clinical Psychology ,Alcoholism ,chemistry ,Emergency medicine ,business - Abstract
To measure the effects of a quality improvement intervention on length of stay and benzodiazepine use among patients admitted for alcohol use disorder.This retrospective cohort study was performed at the Salt Lake City Veterans Affairs Medical Center. Patients 18 years and older admitted to a general medical ward with a diagnosis of alcohol related disorders who were treated for alcohol withdrawal were included. The baseline cohort included patients admitted over 12 months. The post-intervention cohort included patients admitted over 12 months. Primary outcomes were total benzodiazepine dose and length of stay. Secondary outcomes included episodes of delirium tremens and seizures.Total benzodiazepine dose decreased significantly over the intervention period. Length of stay also decreased. No episodes of delirium tremens or seizures were observed.A quality improvement intervention directed at general medicine inpatients admitted for alcohol withdrawal was associated with reductions in total benzodiazepine administration and length of stay.
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- 2021
40. Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous
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Richard C. Harrington, William B. Ludt, Samantha A. Price, Alex Dornburg, Peter C. Wainwright, Peter J. Unmack, Edward D. Burress, Michael E. Alfaro, Thomas J. Near, Matthew A. Campbell, Ava Ghezelayagh, Peter F. Cowman, Sarah T. Friedman, Prosanta Chakrabarty, Janet C. Buckner, Brant C. Faircloth, Matt Friedman, Christine E. Thacker, W. Tyler McCraney, and Jessica R. Glass
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Flatfish ,Evolutionary biology ,Phylogenetics ,Lineage (evolution) ,Adaptive radiation ,biology.animal ,Dominance (ecology) ,Species diversity ,Vertebrate ,Acanthomorpha ,Biology ,biology.organism_classification - Abstract
Spiny-rayed fishes (Acanthomorpha) dominate modern marine habitats and comprise more than a quarter of all living vertebrate species1–3. It is believed that this dominance resulted from explosive lineage and phenotypic diversification coincident with the Cretaceous-Paleogene (K-Pg) mass-extinction event4. It remains unclear, however, if living acanthomorph diversity is the result of a punctuated burst or gradual accumulation of diversity following the K-Pg. We assess these hypotheses with a time-calibrated phylogeny inferred using ultraconserved elements from a sampling of species that represent over 91% of all acanthomorph families, as well as an extensive body shape dataset of extant species. Our results indicate that several million years after the end-Cretaceous, acanthomorphs underwent a prolonged and significant expansion of morphological disparity primarily driven by changes in body elongation, and that acanthomorph lineages containing the bulk of the living species diversity originated throughout the Cenozoic. These acanthomorph lineages radiated into distinct regions of morphospace and retained their iconic phenotypes, including a large group of laterally compressed reef fishes, fast-swimming open-ocean predators, bottom-dwelling flatfishes, seahorses, and pufferfishes. The evolutionary success of spiny-rayed fishes is the culmination of a post K-Pg adaptive radiation in which rates of lineage diversification were decoupled from periods of high phenotypic disparity.
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- 2021
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41. Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous
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Ava, Ghezelayagh, Richard C, Harrington, Edward D, Burress, Matthew A, Campbell, Janet C, Buckner, Prosanta, Chakrabarty, Jessica R, Glass, W Tyler, McCraney, Peter J, Unmack, Christine E, Thacker, Michael E, Alfaro, Sarah T, Friedman, William B, Ludt, Peter F, Cowman, Matt, Friedman, Samantha A, Price, Alex, Dornburg, Brant C, Faircloth, Peter C, Wainwright, and Thomas J, Near
- Subjects
Fossils ,Fishes ,Animals ,Biodiversity ,Extinction, Biological ,Biological Evolution - Abstract
Spiny-rayed fishes (Acanthomorpha) dominate modern marine habitats and account for more than a quarter of all living vertebrate species. Previous time-calibrated phylogenies and patterns from the fossil record explain this dominance by correlating the origin of major acanthomorph lineages with the Cretaceous-Palaeogene mass extinction. Here we infer a time-calibrated phylogeny using ultraconserved elements that samples 91.4% of all acanthomorph families and investigate patterns of body shape disparity. Our results show that acanthomorph lineages steadily accumulated throughout the Cenozoic and underwent a significant expansion of among-clade morphological disparity several million years after the end-Cretaceous. These acanthomorph lineages radiated into and diversified within distinct regions of morphospace that characterize iconic lineages, including fast-swimming open-ocean predators, laterally compressed reef fishes, bottom-dwelling flatfishes, seahorses and pufferfishes. The evolutionary success of spiny-rayed fishes is the culmination of multiple species-rich and phenotypically disparate lineages independently diversifying across the globe under a wide range of ecological conditions.
- Published
- 2021
42. Phosphorylation-dependent control of Arc protein by synaptic plasticity regulator TNIK
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Karun K. Singh, Stephen J. Haggarty, Marshall W. Tyler, Debasis Patnaik, Mooradally Aw, Jennifer Holborn, Steffen P. Graether, Hendrik Wesseling, Nicholas J. Brandon, Jasmin Lalonde, and Judith A. Steen
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Gene product ,Arc (protein) ,Chemistry ,TNIK ,Synaptic plasticity ,Mutant ,Regulator ,Mutagenesis (molecular biology technique) ,Phosphorylation ,Cell biology - Abstract
Activity-regulated cytoskeleton-associated protein (Arc) is an immediate-early gene product that support neuroplastic changes important for cognitive function and memory formation. As a protein with homology to the retroviral Gag protein, a particular characteristic of Arc is its capacity to self-assemble into virus-like capsids that can package mRNAs and transfer those transcripts to other cells. Although a lot has been uncovered about the contributions of Arc to neuron biology and behavior, very little is known about how different functions of Arc are coordinately regulated both temporally and spatially in neurons. The answer to this question we hypothesized must involve the occurrence of different protein post-translational modifications acting to confer specificity. In this study, we used mass spectrometry and sequence prediction strategies to map novel Arc phosphorylation sites. Our approach led us to recognize serine 67 (S67) and threonine 278 (T278) as residues that can be modified by TNIK, which is a kinase abundantly expressed in neurons that shares many functional overlaps with Arc and has, along with its interacting proteins such as the NMDA receptor, been implicated as a risk factor for psychiatric disorders. Furthermore, characterization of each residue using site-directed mutagenesis to create S67 and T278 mutant variants revealed that TNIK action at those amino acids can strongly influence Arc’s subcellular distribution and self-assembly as capsids. Together, our findings reveal an unsuspected connection between Arc and TNIK. Better understanding of the interplay between these two proteins in neuronal cells could lead to new insights about apparition and progression of psychiatric disorders.
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- 2021
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43. Compost utilization and the economic impact in crop production
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Rodney W. Tyler
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Agricultural science ,Agriculture ,business.industry ,Crop production ,Compost ,engineering ,Business ,Economic impact analysis ,engineering.material ,Soil contamination - Abstract
This chapter analyzes the economic impact of using compost in crop production and horticulture. For over 30 years, farmers have used more and more composted materials as inputs to their normal farming activity. Due to issues related to depleted soils from erosion and soil contamination with diseases, insects or chemicals, the use of compost has assisted them to become more productive. The cultural benefits of using compost are discussed throughout this chapter in detail with examples that provide a respectable background for any grower. Also, since there are over 4,000 composting facilities across the United States now, it seems more probable that farms can purchase compost for use, or even better, produce compost from organic residuals on their farm. The rule of farm economics is that farm outputs must pay for the inputs. This simple concept is a cornerstone of this chapter regardless of crops grown.
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- 2021
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44. Open Science: Open Data, Open Models, …and Open Publications?
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Shemin Ge, Wouter Berghuijs, Martyn P. Clark, Cédric H. David, Scott W. Tyler, Ilja van Meerveld, Qingyun Duan, Amir AghaKouchak, Chunmiao Zheng, Charles H. Luce, Marc B. Parlange, University of Zurich, Clark, Martyn P, and Earth and Climate
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Open science ,010504 meteorology & atmospheric sciences ,business.industry ,Computer science ,Financial feasibility ,0208 environmental biotechnology ,02 engineering and technology ,Open access ,01 natural sciences ,Data science ,020801 environmental engineering ,Open data ,10122 Institute of Geography ,2312 Water Science and Technology ,Publishing ,Open access publishing ,open science ,the future of scholarly publications ,910 Geography & travel ,business ,SDG 6 - Clean Water and Sanitation ,0105 earth and related environmental sciences ,PATH (variable) ,Water Science and Technology - Abstract
This commentary explores the challenges and opportunities associated with a possible transition of Water Resources Research to a publication model where all articles are freely available upon publication (“Gold” open access). It provides a review of the status of open access publishing models, a summary of community input, and a path forward for AGU leadership. The decision to convert to open access is framed by a mix of finances and values. On the one hand, the challenge is to define who pays, and how, and what we can do to improve the affordability of publishing. On the other hand, the challenge is to increase the extent to which science is open and accessible. The next steps for the community include an incisive analysis of the financial feasibility of different cost models, and weighing the financial burden for open access against the desire to further advance open science.
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- 2021
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45. The Myth of the Laboratories of Democracy
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Charles W. Tyler and Heather K. Gerken
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History ,Government ,Polymers and Plastics ,Legal doctrine ,media_common.quotation_subject ,Federal preemption ,Industrial and Manufacturing Engineering ,Democracy ,Politics ,Incentive ,State (polity) ,Political science ,Federalism ,Business and International Management ,media_common ,Law and economics - Abstract
A classic constitutional parable teaches that our federal system of government allows the American states to function as “laboratories of democracy.” This tale has been passed down from generation to generation, often to justify constitutional protections for state autonomy from the federal government. But scholars have failed to explain how state governments man-age to overcome numerous impediments to experimentation, including re-source scarcity, free-rider problems, and misaligned incentives. This Article maintains that the laboratories account is missing a proper appreciation for the coordinated networks of third-party organizations (such as interest groups, activists, and funders) that often fuel policy innovation. These groups are the real laboratories of democracy today, as they perform the lion’s share of tasks necessary to enact new policies; they create incentives that motivate elected officials to support their preferred policies; and they mobilize the power of the federal government to change the land-scape against which state experimentation occurs. If our federal system of government seeks to encourage policy experimentation, this insight has several implications for legal doctrine. At a high level of generality, courts should endeavor to create ground rules for regulating competition between political networks, rather than continuing futile efforts to protect state autonomy. The Article concludes by sketching the outlines of this approach in several areas of legal doctrine, including federal preemption of state law, conditional spending, and the anticommandeering principle.
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- 2021
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46. Muffler characterization with implementation of the finite element method and experimental techniques
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W Tyler and Le Roy
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Materials science ,business.industry ,Structural engineering ,Element (category theory) ,business ,Characterization (materials science) - Published
- 2020
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47. Interactions between snow cover and evaporation lead to higher sensitivity of streamflow to temperature
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Tirthankar Roy, Scott W. Tyler, Guo Yue Niu, Peter Troch, and Antonio Alves Meira Neto
- Subjects
010504 meteorology & atmospheric sciences ,Lead (sea ice) ,0207 environmental engineering ,Evaporation ,02 engineering and technology ,Snowpack ,Atmospheric sciences ,Snow ,01 natural sciences ,Arid ,Streamflow ,Potential evaporation ,General Earth and Planetary Sciences ,Environmental science ,020701 environmental engineering ,Snow cover ,0105 earth and related environmental sciences ,General Environmental Science - Abstract
Estimates of potential evaporation often neglect the effects of snow cover on evaporation process. Here, we present a definition of potential evaporation that explicitly accounts for landscapes that are partially covered by snow. We show that, in the presence of snowpack, our evaporation estimates differ from conventional methods that assume evaporation from a free water surface. Specifically, we find that conventional methods overestimate potential evaporation as well as aridity, taken as the ratio of atmospheric water demand to supply, in landscapes where snowfall is significant. With dwindling snow-cover, actual aridity increases, which could explain the reduction in streamflow with decreasing snowfall. We suggest that streamflow, and hence water availability, is more sensitive to temperature changes in colder than in warmer regions. Colder, snow-dominated regions are more likely to experience greater changes in water availability with warming, suggests an analysis that explicitly includes snow cover in potential evaporation estimates.
- Published
- 2020
- Full Text
- View/download PDF
48. A complex bioaccumulation story in flowback and produced water from hydraulic fracturing: The role of organic compounds in inorganic accumulation in Lumbriculus variegatus
- Author
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Greg G. Goss, W. Tyler Mehler, Yifeng Zhang, Katherine N. Snihur, Daniel S. Alessi, and Huizhen Li
- Subjects
toxicokinetic modeling ,Lumbriculus variegatus ,Geologic Sediments ,Environmental Engineering ,Health, Toxicology and Mutagenesis ,0211 other engineering and technologies ,02 engineering and technology ,010501 environmental sciences ,Wastewater ,hydraulic fracturing ,01 natural sciences ,medicine ,lumbriculus variegatus ,Environmental Chemistry ,Toxicokinetics ,Animals ,Oligochaeta ,Waste Management and Disposal ,0105 earth and related environmental sciences ,021110 strategic, defence & security studies ,biology ,Chemistry ,Hydraulic Fracking ,Water ,biology.organism_classification ,Pollution ,Produced water ,Bioaccumulation ,6. Clean water ,Acute toxicity ,inorganics ,Dilution ,Environmental chemistry ,Toxicity ,osmoregulation ,Water Pollutants, Chemical ,Activated carbon ,medicine.drug - Abstract
Hydraulic fracturing creates large volumes of flowback and produced water (FPW). The waste is a complex mixture of organic and inorganic constituents. Although the acute toxicity of FPW to freshwater organisms has been studied, few have attempted to discern the interaction between organic and inorganic constituents within this matrix and its role in toxicity. In the present study, bioaccumulation assays (7-d uptake and 7-d elimination period) with FPW (1% dilution) were conducted with the freshwater oligochaete, Lumbriculus variegatus, to evaluate the toxicokinetics of inorganic elements. To evaluate the interacting role of organics, bioaccumulation of elements in unmodified FPW was compared to activated carbon treated FPW (AC-modified). Differences in uptake and elimination rates as well as elimination steady state concentrations between unmodified and AC-modified treatments indicated that the organics play an important role in the uptake and depuration of inorganic elements in FPW. These differences in toxicokinetics between treatments aligned with observed growth rates in the worms which were higher in the AC-modified treatment. Whether growth differences resulted from increased accumulation and changes in toxicokinetic rates of inorganics or caused by direct toxicity from the organic fraction of FPW itself is still unknown and requires further research.
- Published
- 2020
49. Hydration of α-UO
- Author
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Marianne P, Wilkerson, Sarah C, Hernandez, W Tyler, Mullen, Andrew T, Nelson, Alison L, Pugmire, Brian L, Scott, Elizabeth S, Sooby, Alison L, Tamasi, Gregory L, Wagner, and Justin R, Walensky
- Abstract
Changes in chemical speciation of uranium oxides following storage under varied conditions of temperature and relative humidity are valuable for characterizing material provenance. In this study, subsamples of high purity α-UO
- Published
- 2020
50. Evaluating freshwater mining sediment toxicity in Tasmania: Achieving strong multiple lines of evidence
- Author
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Bryant Gagliardi, Vincent Pettigrove, W. Tyler Mehler, and Michael J. Keough
- Subjects
Aquatic Organisms ,Geologic Sediments ,Environmental Engineering ,010504 meteorology & atmospheric sciences ,Fresh Water ,010501 environmental sciences ,01 natural sciences ,Mining ,Tasmania ,Toxicity Tests ,Environmental monitoring ,Environmental Chemistry ,Waste Management and Disposal ,0105 earth and related environmental sciences ,Invertebrate ,Pollutant ,Principal Component Analysis ,Ecology ,Aquatic ecosystem ,Sediment ,Pollution ,Austrochiltonia subtenuis ,Toxicity ,Environmental science ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
Mining-impacted aquatic systems could be at risk from an assortment of pollutants. The present study evaluated toxicity of mining site sediments from western Tasmania by conducting bioassays with two Australian freshwater species (Chironomus tepperi and Austrochiltonia subtenuis). The present study used multiple lines of evidence (LoE) to assess risk to aquatic biota and the potential sources of that risk at these sites using a sediment quality guideline (SQG) comparison approach (i.e. comparing chemical concentrations at the site (in this case metals, sulfate, and acidic pH) to sediment guideline values) as well as a statistical approach (principle component analysis). Five of the nine mining site sediments showed significant toxicity to both species using survival (A. subtenuis and C. tepperi) and emergence (C. tepperi) as endpoints. Each LoE (SQG comparison and PCA analysis) provided a list of possible contaminants of concern for toxic sites, each list differing from one another. Evaluating these LoE collectively resulted in a stronger characterization of causality and reduced the potential contaminants of concern to a select few, including mainly: copper, sulfate, and acidic pH. Although using multiple lines of evidence reduced the number of potential contaminants of concern, the causality results were still not entirely conclusive, thus we also conducted preliminary investigations using toxicity identification evaluations (TIEs). These TIE investigations, showed the overall importance of acidic pH in these sediments, but also show the need for further work to improve the TIE technique for these types of sediment. The present study illustrates the strengths of using multiple LoE in assessing aquatic risk, especially in the assessment of complex sediments such as those in mining areas of Tasmania. The study, perhaps more importantly, also provides the foundation for more focused work to be conducted in the future to better understanding the implications of mining in western Tasmania.
- Published
- 2019
- Full Text
- View/download PDF
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