79 results on '"Uygun, Korkut"'
Search Results
2. Two‐day Static Cold Preservation of α1,3‐Galactosyltransferase Knockout Kidney Grafts Before Simulated Xenotransplantation.
- Author
-
Mojoudi, Mohammadreza, Taggart, McLean, Karadagi, Ahmad, Hassan, Madeeha, Tomosugi, Toshihide, Tomofuji, Katsuhiro, Agius, Thomas, Lyon, Arnaud, Nakamura, Tsukasa, Taveras, Christopher, Ozgur, Ozge Sila, Kharga, Anil, Matheson, Rudy, Riella, Leonardo V., Kimura, Shoko, Yeh, Heidi, Markmann, James F., Kawai, Tatsuo, Uygun, Korkut, and Longchamp, Alban
- Abstract
Transplantation remains the preferred treatment for end‐stage kidney disease but is critically limited by the number of available organs. Xenografts from genetically modified pigs have become a promising solution to the loss of life while waiting for transplantation. However, the current clinical model for xenotransplantation will require off‐site procurement, leading to a period of ischemia during transportation. As of today, there is limited understanding regarding the preservation of these organs, including the duration of viability, and the associated molecular changes. Thus, our aim was to evaluate the effects of static cold storage (SCS) on α1,3‐galactosyltransferase knockout (GGTA1 KO) kidney. After SCS, viability was further assessed using acellular sub‐normothermic ex vivo perfusion and simulated transplantation with human blood. Compared to baseline, tubular and glomerular interstitium was preserved after 2 days of SCS in both WT and GGTA1 KO kidneys. Bulk RNA‐sequencing demonstrated that only eight genes were differentially expressed after SCS in GGTA1 KO kidneys. During sub‐normothermic perfusion, kidney function, reflected by oxygen consumption, urine output, and lactate production was adequate in GGTA1 KO grafts. During a simulated transplant with human blood, macroscopic and histological assessment revealed minimal kidney injury. However, GGTA1 KO kidneys exhibited higher arterial resistance, increased lactate production, and reduced oxygen consumption during the simulated transplant. In summary, our study suggests that SCS is feasible for the preservation of porcine GGTA1 KO kidneys. However, alternative preservation methods should be evaluated for extended preservation of porcine grafts. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. VCA supercooling in a swine partial hindlimb model.
- Author
-
Berkane, Yanis, Filz von Reiterdank, Irina, Tawa, Pierre, Charlès, Laura, Goutard, Marion, Dinicu, Antonia T., Toner, Mehmet, Bertheuil, Nicolas, Mink van der Molen, Aebele B., Coert, J. Henk, Lellouch, Alexandre G., Randolph, Mark A., Cetrulo Jr., Curtis L., and Uygun, Korkut
- Subjects
SUPERCOOLING ,CRYOPROTECTIVE agents ,PERFUSION ,HINDLIMB ,SWINE ,CELL metabolism - Abstract
Vascularized composite allotransplantations are complex procedures with substantial functional impact on patients. Extended preservation of VCAs is of major importance in advancing this field. It would result in improved donor-recipient matching as well as the potential for ex vivo manipulation with gene and cell therapies. Moreover, it would make logistically feasible immune tolerance induction protocols through mixed chimerism. Supercooling techniques have shown promising results in multi-day liver preservation. It consists of reaching sub-zero temperatures while preventing ice formation within the graft by using various cryoprotective agents. By drastically decreasing the cell metabolism and need for oxygen and nutrients, supercooling allows extended preservation and recovery with lower ischemia–reperfusion injuries. This study is the first to demonstrate the supercooling of a large animal model of VCA. Porcine hindlimbs underwent 48 h of preservation at − 5 °C followed by recovery and normothermic machine perfusion assessment, with no issues in ice formation and favorable levels of injury markers. Our findings provide valuable preliminary results, suggesting a promising future for extended VCA preservation. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
4. Machine Perfusion Enables 24-h Preservation of Vascularized Composite Allografts in a Swine Model of Allotransplantation.
- Author
-
Goutard, Marion, Tawa, Pierre, Berkane, Yanis, Andrews, Alec R., Pendexter, Casie A., de Vries, Reinier J., Pozzo, Victor, Romano, Golda, Lancia, Hyshem H., von Reiterdank, Irina Filz, Bertheuil, Nicolas, Rosales, Ivy A., How, Ira Doressa Anne L., Randolph, Mark A., Lellouch, Alexandre G., Cetrulo Jr., Curtis L., and Uygun, Korkut
- Subjects
PRESERVATION of organs, tissues, etc. ,HOMOGRAFTS ,PERFUSION ,SWINE ,COLD storage - Abstract
The current gold standard for preserving vascularized composite allografts (VCA) is 4°C static cold storage (SCS), albeit muscle vulnerability to ischemia can be described as early as after 2 h of SCS. Alternatively, machine perfusion (MP) is growing in theworld of organ preservation. Herein, we investigated the outcomes of oxygenated acellular subnormothermic machine perfusion (SNMP) for 24-h VCA preservation before allotransplantation in a swine model. Six partial hindlimbs were procured on adult pigs and preserved ex vivo for 24 h with either SNMP (n = 3) or SCS (n = 3) before heterotopic allotransplantation. Recipient animals received immunosuppression and were followed up for 14 days. Clinical monitoring was carried out twice daily, and graft biopsies and blood samples were regularly collected. Two blinded pathologists assessed skin and muscle samples. Overall survival was higher in the SNMP group. Early euthanasia of 2 animals in the SCS group was linked to significant graft degeneration. Analyses of the grafts showed massive muscle degeneration in the SCS group and a normal aspect in the SNMP group 2 weeks after allotransplantation. Therefore, this 24-h SNMP protocol using a modified Steen solution generated better clinical and histological outcomes in allotransplantation when compared to time-matched SCS. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
5. Effect of Donor Age and Liver Steatosis on Potential of Decellularized Liver Matrices to be used as a Platform for iPSC‐Hepatocyte Culture.
- Author
-
Acun, Aylin, Fan, Letao, Oganesyan, Ruben, Uygun, Korkut M., Yeh, Heidi, Yarmush, Martin L., and Uygun, Basak E.
- Published
- 2024
- Full Text
- View/download PDF
6. Metabolic perturbation studies using a Nash Equilibrium model of liver machine perfusion: modeling oxidative stress and effect of glutathione supplementation.
- Author
-
Lucia, Angelo and Uygun, Korkut
- Subjects
PERFUSION ,NASH equilibrium ,OXIDATIVE stress ,GLUTATHIONE ,LIVER cells ,LIVER ,HYDROGEN peroxide ,CYTOCHROME c - Abstract
The current clinical standard of Static Cold Storage (SCS) which involves preservation on ice (about +4°C) in a hypoxic state limits storage to a few hours for metabolically active tissues such as the liver and the heart. This period of hypoxia during can generate superoxide and other free radicals from purine metabolism, a well-established component of ischemia/reperfusion injury (IRI). Machine perfusion is at the cutting edge of organ preservation, which provides a functional, oxygenated preservation modality that can avoid/attenuate IRI. In clinical application, perfusion usually follows a period of SCS. This presentation of oxygen following hypoxia can lead to superoxide and hydrogen peroxide generation, but machine perfusion also allows manipulation of the temperature profiles and supply of antioxidant treatments, which could be used to minimize such issues. However, metabolomic data is difficult to gather, and there are currently no mathematical models present to allow rational design of experiments or guide clinical practice. In this article, the effects of a gradual warming temperature policy and glutathione supplementation to minimize oxidative stress are studied. An optimal gradual warming temperature policy for mid-thermic machine perfusion of a liver metabolic model is determined using a combination of Nash Equilibrium and Monte Carlo optimization. Using this optimal gradual warming temperature policy, minimum GSH requirements to maintain hydrogen peroxide concentrations in the normal region are calculated using a different Monte Carlo optimization methodology. In addition, the dynamic behavior of key metabolites and cofactors are determined. Results show that the minimum GSH requirement increases and that the ratio of GSH/GSSG decreases with increasing hydrogen peroxide concentration. In addition, at high concentrations of hydrogen peroxide it is shown that cytochrome C undergoes dysfunction leading to a decrease in useful oxygen consumption and ATP synthesis from the electron transport chain and an overall reduction in the energy charge for the liver cells. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
7. The Autonomization Principle in Vascularized Flaps: An Alternative Strategy for Composite Tissue Scaffold In Vivo Revascularization.
- Author
-
Berkane, Yanis, Kostyra, David M., Chrelias, Theodoros, Randolph, Mark A., Lellouch, Alexandre G., Cetrulo Jr., Curtis L., Uygun, Korkut, Uygun, Basak E., Bertheuil, Nicolas, and Duisit, Jérôme
- Subjects
TISSUE scaffolds ,PLASTIC surgeons ,SURGICAL flaps ,COMPLEX matrices ,EXTRACELLULAR matrix ,BIOENGINEERING ,PERFORATOR flaps (Surgery) - Abstract
Autonomization is a physiological process allowing a flap to develop neo-vascularization from the reconstructed wound bed. This phenomenon has been used since the early application of flap surgeries but still remains poorly understood. Reconstructive strategies have greatly evolved since, and fasciocutaneous flaps have progressively replaced muscle-based reconstructions, ensuring better functional outcomes with great reliability. However, plastic surgeons still encounter challenges in complex cases where conventional flap reconstruction reaches its limitations. Furthermore, emerging bioengineering applications, such as decellularized scaffolds allowing a complex extracellular matrix to be repopulated with autologous cells, also face the complexity of revascularization. The objective of this article is to gather evidence of autonomization phenomena. A systematic review of flap autonomization is then performed to document the minimum delay allowing this process. Finally, past and potential applications in bio- and tissue-engineering approaches are discussed, highlighting the potential for in vivo revascularization of acellular scaffolds. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
8. Towards Optimizing Sub-Normothermic Machine Perfusion in Fasciocutaneous Flaps: A Large Animal Study.
- Author
-
Berkane, Yanis, Lellouch, Alexandre G., Goudot, Guillaume, Shamlou, Austin, Filz von Reiterdank, Irina, Goutard, Marion, Tawa, Pierre, Girard, Paul, Bertheuil, Nicolas, Uygun, Basak E., Randolph, Mark A., Duisit, Jérôme, Cetrulo Jr., Curtis L., and Uygun, Korkut
- Subjects
FREE flaps ,VASCULAR resistance ,PERFUSION ,PLASTIC surgery ,TRANSPLANTATION of organs, tissues, etc. ,ARTIFICIAL blood circulation ,MACHINERY - Abstract
Machine perfusion has developed rapidly since its first use in solid organ transplantation. Likewise, reconstructive surgery has kept pace, and ex vivo perfusion appears as a new trend in vascularized composite allotransplants preservation. In autologous reconstruction, fasciocutaneous flaps are now the gold standard due to their low morbidity (muscle sparing) and favorable functional and cosmetic results. However, failures still occasionally arise due to difficulties encountered with the vessels during free flap transfer. The development of machine perfusion procedures would make it possible to temporarily substitute or even avoid microsurgical anastomoses in certain complex cases. We performed oxygenated acellular sub-normothermic perfusions of fasciocutaneous flaps for 24 and 48 h in a porcine model and compared continuous and intermittent perfusion regimens. The monitored metrics included vascular resistance, edema, arteriovenous oxygen gas differentials, and metabolic parameters. A final histological assessment was performed. Porcine flaps which underwent successful oxygenated perfusion showed minimal or no signs of cell necrosis at the end of the perfusion. Intermittent perfusion allowed overall better results to be obtained at 24 h and extended perfusion duration. This work provides a strong foundation for further research and could lead to new and reliable reconstructive techniques. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
9. Zebrafish as a high throughput model for organ preservation and transplantation research.
- Author
-
Da Silveira Cavalcante, Luciana, Lopera Higuita, Manuela, González‐Rosa, Juan Manuel, Marques, Beatriz, To, Samantha, Pendexter, Casie A., Cronin, Stephanie E. J., Gopinathan, Kaustav, de Vries, Reinier J., Ellett, Felix, Uygun, Korkut, Langenau, David M., Toner, Mehmet, and Tessier, Shannon N.
- Published
- 2023
- Full Text
- View/download PDF
10. Gluteal Propeller Perforator Flaps: A Paradigm Shift in Abdominoperineal Amputation Reconstruction.
- Author
-
Chrelias, Theodoros, Berkane, Yanis, Rousson, Etienne, Uygun, Korkut, Meunier, Bernard, Kartheuser, Alex, Watier, Eric, Duisit, Jérôme, and Bertheuil, Nicolas
- Subjects
PERFORATOR flaps (Surgery) ,PATIENT compliance ,AMPUTATION ,PROPELLERS ,OPERATIVE surgery ,DISEASE relapse ,SURGICAL wound dehiscence - Abstract
Abdominoperineal amputation (AAP) is a gold standard procedure treating advanced abdominal and pelvic cancers. The defect resulting from this extensive surgery must be reconstructed to avoid complications, such as infection, dehiscence, delayed healing, or even death. Several approaches can be chosen depending on the patient. Muscle-based reconstructions are a reliable solution but are responsible for additional morbidity for these fragile patients. We present and discuss our experience in AAP reconstruction using gluteal-artery-based propeller perforator flaps (G-PPF) in a case series. Between January 2017 and March 2021, 20 patients received G-PPF reconstruction in two centers. Either superior gluteal artery (SGAP)- or inferior artery (IGAP)-based perforator flaps were performed depending on the best configuration. Preoperative, intraoperative, and postoperative data were collected. A total of 23 G-PPF were performed—12 SGAP and 11 IGAP flaps. Final defect coverage was achieved in 100% of cases. Eleven patients experienced at least one complication (55%), amongst whom six patients (30%) had delayed healing, and three patients (15%) had at least one flap complication. One patient underwent a new surgery at 4 months for a perineal abscess under the flap, and three patients died from disease recurrence. Gluteal-artery-based propeller perforator flaps are an effective and modern surgical procedure for AAP reconstruction. Their mechanic properties, in addition to their low morbidity, make them an optimal technique for this purpose; however, technical skills are needed, and closer surveillance with patient compliance is critical to ensure success. G-PPF should be widely used in specialized centers and considered a modern alternative to muscle-based reconstructions. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
11. Exceeding the Limits of Static Cold Storage in Limb Transplantation Using Subnormothermic Machine Perfusion.
- Author
-
Goutard, Marion, de Vries, Reinier J., Tawa, Pierre, Pendexter, Casie A., Rosales, Ivy A., Tessier, Shannon N., Burlage, Laura C., Lantieri, Laurent, Randolph, Mark A., Lellouch, Alexandre G., Cetrulo Jr, Curtis L., and Uygun, Korkut
- Subjects
COLD storage ,PERFUSION ,PRESERVATION of organs, tissues, etc. ,LABORATORY rats ,VASCULAR resistance ,KIDNEY transplantation - Abstract
Background For 50 years, static cold storage (SCS) has been the gold standard for solid organ preservation in transplantation. Although logistically convenient, this preservation method presents important constraints in terms of duration and cold ischemia-induced lesions. We aimed to develop a machine perfusion (MP) protocol for recovery of vascularized composite allografts (VCA) after static cold preservation and determine its effects in a rat limb transplantation model. Methods Partial hindlimbs were procured from Lewis rats and subjected to SCS in Histidine-Tryptophan-Ketoglutarate solution for 0, 12, 18, 24, and 48 hours. They were then either transplanted (Txp), subjected to subnormothermic machine perfusion (SNMP) for 3 hours with a modified Steen solution, or to SNMP + Txp. Perfusion parameters were assessed for blood gas and electrolytes measurement, and flow rate and arterial pressures were monitored continuously. Histology was assessed at the end of perfusion. For select SCS durations, graft survival and clinical outcomes after transplantation were compared between groups at 21 days. Results Transplantation of limbs preserved for 0, 12, 18, and 24-hour SCS resulted in similar survival rates at postoperative day 21. Grafts cold-stored for 48 hours presented delayed graft failure (p = 0.0032). SNMP of limbs after 12-hour SCS recovered the vascular resistance, potassium, and lactate levels to values similar to limbs that were not subjected to SCS. However, 18-hour SCS grafts developed significant edema during SNMP recovery. Transplantation of grafts that had undergone a mixed preservation method (12-hour SCS + SNMP + Txp) resulted in better clinical outcomes based on skin clinical scores at day 21 post-transplantation when compared to the SCS + Txp group (p = 0.01613). Conclusion To date, VCA MP is still limited to animal models and no protocols are yet developed for graft recovery. Our study suggests that ex vivo SNMP could help increase the preservation duration and limit cold ischemia-induced injury in VCA transplantation. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
12. Development of a rat forelimb vascularized composite allograft (VCA) perfusion protocol.
- Author
-
Pendexter, Casie A., Haque, Omar, Mojoudi, Mohammadreza, Maggipinto, Sarah, Goutard, Marion, Baicu, Simona, Lellouch, Alexandre G., Markmann, James F., Brandacher, Gerald, Yeh, Heidi, Tessier, Shannon N., Cetrulo, Curtis, and Uygun, Korkut
- Subjects
FORELIMB ,HINDLIMB ,HOMOGRAFTS ,RATS - Abstract
Vascularized composite allografts (VCAs) refer to en bloc heterogenous tissue that is transplanted to restore form and function after amputation or tissue loss. Rat limb VCA has emerged as a robust translational model to study the pathophysiology of these transplants. However, these models have predominately focused on hindlimb VCAs which does not translate anatomically to upper extremity transplantation, whereas the majority of clinical VCAs are upper extremity and hand transplants. This work details our optimization of rat forelimb VCA procurement and sub-normothermic machine perfusion (SNMP) protocols, with results in comparison to hindlimb perfusion with the same perfusion modality. Results indicate that compared to hindlimbs, rat forelimbs on machine perfusion mandate lower flow rates and higher acceptable maximum pressures. Additionally, low-flow forelimbs have less cellular damage than high-flow forelimbs based on oxygen uptake, edema, potassium levels, and histology through 2 hours of machine perfusion. These results are expected to inform future upper extremity VCA preservation studies. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
13. Microvascular assessment of fascio-cutaneous flaps by ultrasound: A large animal study.
- Author
-
Goudot, Guillaume, Berkane, Yanis, de Clermont-Tonnerre, Eloi, Guinier, Claire, von Reiterdank, Irina Filz, van Kampen, Antonia, Uygun, Korkut, Cetrulo Jr, Curtis L., Uygun, Basak E., Dua, Anahita, and Lellouch, Alexandre G.
- Subjects
FEMORAL artery ,ULTRASONIC imaging ,COLLATERAL circulation ,SURGICAL flaps - Abstract
Objectives: Blood perfusion quality of a flap is the main prognostic factor for success. Microvascular evaluation remains mostly inaccessible. We aimed to evaluate the microflow imaging mode, MV-Flow, in assessing flap microvascularization in a pig model of the fasciocutaneous flap. Methods: On five pigs, bilateral saphenous fascio-cutaneous flaps were procured on the superficial femoral vessels. A conventional ultrasound evaluation in pulsed Doppler and color Doppler was conducted on the ten flaps allowing for the calculation of the saphenous artery flow rate. The MV-Flow mode was then applied: for qualitative analysis, with identification of saphenous artery collaterals; then quantitative, with repeated measurements of the Vascularity Index (VI), percentage of pixels where flow is detected relative to the total ultrasound view area. The measurements were then repeated after increasing arterial flow by clamping the distal femoral artery. Results: The MV-Flow mode allowed a better follow-up of the saphenous artery's collaterals and detected microflows not seen with the color Doppler. The VI was correlated to the saphenous artery flow rate (Spearman rho of 0.64; p = 0.002) and allowed to monitor the flap perfusion variations. Conclusion: Ultrasound imaging of microvascularization by MV-Flow mode and its quantification by VI provides valuable information in evaluating the microvascularization of flaps. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
14. Pan-caspase inhibition during normothermic machine perfusion of discarded livers mitigates ex situ innate immune responses.
- Author
-
Raigani, Siavash, Santiago, John, Ohman, Anders, Heaney, Megan, Baptista, Sofia, Coe, Taylor M., de Vries, Reinier J., Rosales, Ivy, Shih, Angela, Markmann, James F., Gruppuso, Philip, Uygun, Korkut, Sanders, Jennifer, and Yeh, Heidi
- Subjects
IMMUNE response ,PERFUSION ,LIVER ,LIVER transplantation ,NATURAL immunity - Abstract
Access to liver transplantation is limited by a significant organ shortage. The recent introduction of machine perfusion technology allows surgeons to monitor and assess ex situ liver function prior to transplantation. However, many donated organs are of inadequate quality for transplant, though opportunities exist to rehabilitate organ function with adjunct therapeutics during normothermic machine perfusion. In this preclinical study, we targeted the apoptosis pathway as a potential method of improving hepatocellular function. Treatment of discarded human livers during normothermic perfusion with an irreversible pan-caspase inhibitor, emricasan, resulted in significant mitigation of innate immune and pro-inflammatory responses at both the transcriptional and protein level. This was evidenced by significantly decreased circulating levels of the pro-inflammatory cytokines, interleukin-6, interleukin-8, and interferon-gamma, compared to control livers. Compared to emricasan-treated livers, untreated livers demonstrated transcriptional changes notable for enrichment in pathways involved in innate immunity, leukocyte migration, and cytokine-mediated signaling. Targeting of unregulated apoptosis may represent a viable therapeutic intervention for immunomodulation during machine perfusion. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
15. Partial freezing of rat livers extends preservation time by 5-fold.
- Author
-
Tessier, Shannon N., de Vries, Reinier J., Pendexter, Casie A., Cronin, Stephanie E. J., Ozer, Sinan, Hafiz, Ehab O. A., Raigani, Siavash, Oliveira-Costa, Joao Paulo, Wilks, Benjamin T., Lopera Higuita, Manuela, van Gulik, Thomas M., Usta, Osman Berk, Stott, Shannon L., Yeh, Heidi, Yarmush, Martin L., Uygun, Korkut, and Toner, Mehmet
- Subjects
CRYOPROTECTIVE agents ,ICE prevention & control ,WOOD frog ,FREEZING ,BILE ,LIVER ,PROPYLENE glycols - Abstract
The limited preservation duration of organs has contributed to the shortage of organs for transplantation. Recently, a tripling of the storage duration was achieved with supercooling, which relies on temperatures between −4 and −6 °C. However, to achieve deeper metabolic stasis, lower temperatures are required. Inspired by freeze-tolerant animals, we entered high-subzero temperatures (−10 to −15 °C) using ice nucleators to control ice and cryoprotective agents (CPAs) to maintain an unfrozen liquid fraction. We present this approach, termed partial freezing, by testing gradual (un)loading and different CPAs, holding temperatures, and storage durations. Results indicate that propylene glycol outperforms glycerol and injury is largely influenced by storage temperatures. Subsequently, we demonstrate that machine perfusion enhancements improve the recovery of livers after freezing. Ultimately, livers that were partially frozen for 5-fold longer showed favorable outcomes as compared to viable controls, although frozen livers had lower cumulative bile and higher liver enzymes. The limited preservation duration of donor organs is a big problem. Here the authors report a method for the freezing of whole rat livers at temperatures between −10 °C to −15 °C for up to 5 days, based on freeze-tolerant wood frogs, and term this partial freezing. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
16. Modeling energy depletion in rat livers using Nash equilibrium metabolic pathway analysis.
- Author
-
Lucia, Angelo, Ferrarese, Emily, and Uygun, Korkut
- Subjects
NASH equilibrium ,LIVER cells ,COLD storage ,HUMAN body ,LIVER ,RATS - Abstract
The current gold standard of Static Cold Storage (SCS), which is static cold storage on ice (about + 4 °C) in a specialized media such as the University of Wisconsin solution (UW), limits storage to few hours for vascular and metabolically active tissues such as the liver and the heart. The liver is arguably the pinnacle of metabolism in human body and therefore metabolic pathway analysis immediately becomes very relevant. In this article, a Nash Equilibrium (NE) approach, which is a first principles approach, is used to model and simulate the static cold storage and warm ischemia of a proposed model of liver cells. Simulations of energy depletion in the liver in static cold storage measured by ATP content and energy charge are presented along with comparisons to experimental data. In addition, conversion of Nash Equilibrium iterations to time are described along with an uncertainty analysis for the parameters in the model. Results in this work show that the Nash Equilibrium approach provides a good match to experimental data for energy depletion and that the uncertainty in model parameters is very small with percent variances less than 0.1%. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
17. Specific patterns of vital sign fluctuations predict infection and enable sepsis diagnosis in pediatric burn patients.
- Author
-
Sadeq, Farzin, Poster, Jonah, Chu, Chris, Weber, Joan, Lydon, Martha, Begis, Maggie Dylewski, Sheridan, Robert Leo, and Uygun, Korkut
- Subjects
BURN patients ,CHILD patients ,VITAL signs ,BODY surface area ,BURN care units ,SEPSIS - Abstract
Early recognition of the clinical signs of bloodstream infection in pediatric burn patients is key to improving survival rates in the burn unit. The objective of this study was to propose a simple scoring criteria that used readily available temperature, heart rate (HR) and mean arterial pressure (MAP) data to accurately predict bloodstream infection in pediatric burn patients. A retrospective chart review included 100 patients admitted to the pediatric burn unit for >20% total body surface area (TBSA) burn injuries. Each patient had multiple blood culture tests, and each test was treated as a separate and independent "infection event" for analysis. The time at each blood culture draw was time 0 for that event, and temperature, HR and MAP data was collected for 24 hours after the blood culture was drawn. "Infection events" included in this study had at least six complete sets of temperature, HR and MAP data entries. Median temperature, HR and MAP, as well as mean fever spikes, HR spikes and MAP dips, were compared between infection group (positive blood cultures) and control group (negative blood cultures). These vital sign fluctuations were evaluated individually and as a combination of all three as timely predictors of bloodstream infection. In addition, we tested the prediction of Gram-negative bacteria versus Gram-positive or fungi present in blood cultures. Patients in the infection group had significantly higher median temperatures (p<0.001), mean fever spikes (p<0.001) and mean HR spikes (p<0.001), compared to the control group. Using the combination scoring criteria to predict bloodstream infection, the strongest predictive values in the 24-hour timeframe had high sensitivity (93%) and specificity (81%). The predictive test metric based on vital sign spikes predicted Gram-negative bacteria, but with limited sensitivity (57%) and specificity (44%). A simple scoring criteria using a combination of fever spikes, HR spikes and MAP dips predicted bloodstream infection in pediatric burn patients, and can be feasibly implemented in routine clinical care. There is also potential to use the predictive metric to detect a few select organisms based on vital signs, however further work is necessary to enhance accuracy to levels that would allow consideration for clinical use. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
18. Activation of autophagy during normothermic machine perfusion of discarded livers is associated with improved hepatocellular function.
- Author
-
Ohman, Anders, Raigani, Siavash, Santiago, John C., Heaney, Megan G., Boylan, Joan M., Parry, Nicola, Carrol, Cailah, Baptista, Sofia G., Uygun, Korkut, Gruppuso, Philip A., Sanders, Jennifer A., and Heidi Yeh
- Subjects
AUTOPHAGY ,LIVER ,PRINCIPAL components analysis ,PERFUSION ,PROTEIN analysis ,HEPATOCELLULAR carcinoma - Abstract
Liver transplantation is hampered by a severe shortage of donor organs. Normothermic machine perfusion (NMP) of donor livers allows dynamic preservation in addition to viability assessment before transplantation. Little is known about the injury and repair mechanisms induced during NMP. To investigate these mechanisms, we examined gene and protein expression changes in a cohort of discarded human livers, stratified by hepatocellular function, during NMP. Six human livers acquired through donation after circulatory death (DCD) underwent 12 h of NMP. Of the six livers, three met predefined criteria for adequate hepatocellular function. We applied transcriptomic profiling and protein analysis to evaluate temporal changes in gene expression during NMP between functional and nonfunctional livers. Principal component analysis segregated the two groups and distinguished the various perfusion time points. Transcriptomic analysis of biopsies from functional livers indicated robust activation of innate immunity after 3 h of NMP followed by enrichment of prorepair and prosurvival mechanisms. Nonfunctional livers demonstrated delayed and persistent enrichment of markers of innate immunity. Functional livers demonstrated effective induction of autophagy, a cellular repair and homeostasis pathway, in contrast to nonfunctional livers. In conclusion, NMP of discarded DCD human livers results in innate immune-mediated injury, while also activating autophagy, a presumed mechanism for support of cellular repair. More pronounced activation of autophagy was seen in livers that demonstrated adequate hepatocellular function. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
19. The effect of blood cells retained in rat livers during static cold storage on viability outcomes during normothermic machine perfusion.
- Author
-
Haque, Omar, Pendexter, Casie A., Wilks, Benjamin T., Hafiz, Ehab O. A., Markmann, James F., Uygun, Korkut, Yeh, Heidi, and Tessier, Shannon N.
- Subjects
COLD storage ,BLOOD cells ,PERFUSION ,LIVER ,RATS ,HISTOLOGY - Abstract
In transplantation, livers are transported to recipients using static cold storage (SCS), whereby livers are exposed to cold ischemic injury that contribute to post-transplant risk factors. We hypothesized that flushing organs during procurement with cold preservation solutions could influence the number of donor blood cells retained in the allograft thereby exacerbating cold ischemic injury. We present the results of rat livers that underwent 24 h SCS after being flushed with a cold University of Wisconsin (UW) solution versus room temperature (RT) lactated ringers (LR) solution. These results were compared to livers that were not flushed prior to SCS and thoroughly flushed livers without SCS. We used viability and injury metrics collected during normothermic machine perfusion (NMP) and the number of retained peripheral cells (RPCs) measured by histology to compare outcomes. Compared to the cold UW flush group, livers flushed with RT LR had lower resistance, lactate, AST, and ALT at 6 h of NMP. The number of RPCs also had significant positive correlations with resistance, lactate, and potassium levels and a negative correlation with energy charge. In conclusion, livers exposed to cold UW flush prior to SCS appear to perform worse during NMP, compared to RT LR flush. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
20. Non-invasive quantification of the mitochondrial redox state in livers during machine perfusion.
- Author
-
de Vries, Reinier J., Cronin, Stephanie E. J., Romfh, Padraic, Pendexter, Casie A., Jain, Rohil, Wilks, Benjamin T., Raigani, Siavash, van Gulik, Thomas M., Chen, Peili, Yeh, Heidi, Uygun, Korkut, and Tessier, Shannon N.
- Subjects
REPERFUSION injury ,RESONANCE Raman spectroscopy ,MITOCHONDRIA ,OXIDATION-reduction reaction ,LIVER transplantation - Abstract
Ischemia reperfusion injury (IRI) is a critical problem in liver transplantation that can lead to life-threatening complications and substantially limit the utilization of livers for transplantation. However, because there are no early diagnostics available, fulminant injury may only become evident post-transplant. Mitochondria play a central role in IRI and are an ideal diagnostic target. During ischemia, changes in the mitochondrial redox state form the first link in the chain of events that lead to IRI. In this study we used resonance Raman spectroscopy to provide a rapid, non-invasive, and label-free diagnostic for quantification of the hepatic mitochondrial redox status. We show this diagnostic can be used to significantly distinguish transplantable versus non-transplantable ischemically injured rat livers during oxygenated machine perfusion and demonstrate spatial differences in the response of mitochondrial redox to ischemia reperfusion. This novel diagnostic may be used in the future to predict the viability of human livers for transplantation and as a tool to better understand the mechanisms of hepatic IRI. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
21. Multiorgan Metabolomics and Lipidomics Provide New Insights Into Fat Infiltration in the Liver, Muscle Wasting, and Liver-Muscle Crosstalk Following Burn Injury.
- Author
-
Mert, Safak, Bulutoglu, Beyza, Chu, Christopher, Dylewski, Maggie, Lin, Florence M, Yu, Yong-Ming, Yarmush, Martin L, Sheridan, Robert L, and Uygun, Korkut
- Subjects
KREBS cycle ,METABOLOMICS ,LIVER ,ERDHEIM-Chester disease ,BODY surface area ,LIVER analysis ,MUSCLE protein metabolism ,BIOLOGICAL models ,RESEARCH ,SKELETAL muscle ,BURNS & scalds ,ANIMAL experimentation ,RESEARCH methodology ,MEDICAL cooperation ,EVALUATION research ,RATS ,COMPARATIVE studies - Abstract
Burn injury mediated hypermetabolic syndrome leads to increased mortality among severe burn victims, due to liver failure and muscle wasting. Metabolic changes may persist up to 2 years following the injury. Thus, understanding the underlying mechanisms of the pathology is crucially important to develop appropriate therapeutic approaches. We present detailed metabolomic and lipidomic analyses of the liver and muscle tissues in a rat model with a 30% body surface area burn injury located at the dorsal skin. Three hundred and thirty-eight of 1587 detected metabolites and lipids in the liver and 119 of 1504 in the muscle tissue exhibited statistically significant alterations. We observed excessive accumulation of triacylglycerols, decreased levels of S-adenosylmethionine, increased levels of glutamine and xenobiotics in the liver tissue. Additionally, the levels of gluconeogenesis, glycolysis, and tricarboxylic acid cycle metabolites are generally decreased in the liver. On the other hand, burn injury muscle tissue exhibits increased levels of acyl-carnitines, alpha-hydroxyisovalerate, ophthalmate, alpha-hydroxybutyrate, and decreased levels of reduced glutathione. The results of this preliminary study provide compelling observations that liver and muscle tissues undergo distinctly different changes during hypermetabolism, possibly reflecting liver-muscle crosstalk. The liver and muscle tissues might be exacerbating each other's metabolic pathologies, via excessive utilization of certain metabolites produced by each other. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
22. A portable single-sided magnetic-resonance sensor for the grading of liver steatosis and fibrosis.
- Author
-
Bashyam, Ashvin, Frangieh, Chris J., Raigani, Siavash, Sogo, Jeremy, Bronson, Roderick T., Uygun, Korkut, Yeh, Heidi, Ausiello, Dennis A., and Cima, Michael J.
- Published
- 2021
- Full Text
- View/download PDF
23. Evolving utilization of donation after circulatory death livers in liver transplantation: The day of DCD has come.
- Author
-
Haque, Omar, Yuan, Qing, Uygun, Korkut, and Markmann, James F.
- Subjects
LIVER transplantation ,BRAIN death ,TRANSPLANTATION of organs, tissues, etc. ,MYOCARDIAL reperfusion ,HOMOGRAFTS - Abstract
Compared to donation after brain death (DBD), livers procured for transplantation from donation after circulatory death (DCD) donors experience more ischemia‐reperfusion injury and higher rates of ischemic cholangiopathy due to the period of warm ischemic time (WIT) following withdrawal of life support. As a result, utilization of DCD livers for liver transplant (LT) has generally been limited to short WITs and younger aged donor grafts, causing many recovered DCD organs to be discarded without consideration for transplant. This study assesses how DCD liver utilization and outcomes have changed over time, using OPTN data from adult, first‐time, deceased donor, whole‐organ LTs between January 1995 and December 2019. Results show that increased clinical experience with DCD LT has translated into increased use of livers from DCD donors, shorter ischemic times, shorter lengths of hospitalization after transplant, and lower rates of retransplantation. The data also reveal that over the past decade, the rate of increase in DCD LTs conducted in the United States has outpaced that of DBD. Together, these trends signal an opportunity for the field of liver transplantation to mitigate the organ shortage by capitalizing on DCD liver allografts that are currently not being utilized. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
24. Viability testing of discarded livers with normothermic machine perfusion: Alleviating the organ shortage outweighs the cost.
- Author
-
Raigani, Siavash, De Vries, Reinier J., Carroll, Cailah, Chen, Ya‐Wen, Chang, David C., Shroff, Stuti G., Uygun, Korkut, and Yeh, Heidi
- Subjects
PERFUSION ,LIVER ,COST analysis ,LIVER transplantation ,SCARCITY - Abstract
Background: Over 700 donor livers are discarded annually in the United States due to high risk of poor graft function. The objective of this study was to determine the impact of using normothermic machine perfusion to identify transplantable livers among those currently discarded. Study Design: A series of 21 discarded human livers underwent viability assessment during normothermic machine perfusion. Cross‐sectional analysis of the Scientific Registry of Transplant Recipients database and cost analysis was performed to extrapolate the case series to national experience. Results: 21 discarded human livers were included in the perfusion cohort. 11 of 20 (55%) eligible grafts met viability criteria for transplantation. Grafts in the perfusion cohort had a similar donor risk index compared with discarded grafts (n = 1402) outside of New England in 2017 and 2018 (median [IQR]: 2.0 [1.5, 2.4] vs. 2.0 [1.7, 2.3], P =.40). 705 (IQR 677‐741) livers were discarded annually in the United States since 2005, translating to the potential for 398 additional transplants nationally. The median cost to identify a transplantable graft with machine perfusion was $28,099 USD. Conclusions: Normothermic machine perfusion of discarded livers could identify a significant number of transplantable grafts, significantly improving access to liver transplantation. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
25. Moving the Margins: Updates on the Renaissance in Machine Perfusion for Organ Transplantation.
- Author
-
Noah, Cray V., Tratnig-Frankl, Philipp, Raigani, Siavash, Cetrulo, Curtis L., Uygun, Korkut, and Yeh, Heidi
- Published
- 2020
- Full Text
- View/download PDF
26. Subzero non-frozen preservation of human livers in the supercooled state.
- Author
-
de Vries, Reinier J., Tessier, Shannon N., Banik, Peony D., Nagpal, Sonal, Cronin, Stephanie E. J., Ozer, Sinan, Hafiz, Ehab O. A., van Gulik, Thomas M., Yarmush, Martin L., Markmann, James F., Toner, Mehmet, Yeh, Heidi, and Uygun, Korkut
- Published
- 2020
- Full Text
- View/download PDF
27. Improvement of steatotic rat liver function with a defatting cocktail during ex situ normothermic machine perfusion is not directly related to liver fat content.
- Author
-
Raigani, Siavash, Carroll, Cailah, Griffith, Stephanie, Pendexter, Casie, Rosales, Ivy, Deirawan, Hany, Beydoun, Rafic, Yarmush, Martin, Uygun, Korkut, and Yeh, Heidi
- Subjects
LIVER ,FATTY acid oxidation ,PERFUSION ,LIVER transplantation ,BEVERAGE flavor & odor ,OXIDATIVE phosphorylation ,RATS ,COCKTAILS - Abstract
There is a significant organ shortage in the field of liver transplantation, partly due to a high discard rate of steatotic livers from donors. These organs are known to function poorly if transplanted but make up a significant portion of the available pool of donated livers. This study demonstrates the ability to improve the function of steatotic rat livers using a combination of ex situ machine perfusion and a "defatting" drug cocktail. After 6 hours of perfusion, defatted livers demonstrated lower perfusate lactate levels and improved bile quality as demonstrated by higher bile bicarbonate and lower bile lactate. Furthermore, defatting was associated with decreased gene expression of pro-inflammatory cytokines and increased expression of enzymes involved in mitochondrial fatty acid oxidation. Rehabilitation of marginal or discarded steatotic livers using machine perfusion and tailored drug therapy can significantly increase the supply of donor livers for transplantation. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
28. Twenty-four hour ex-vivo normothermic machine perfusion in rat livers.
- Author
-
Haque, Omar, Pendexter, Casie A., Cronin, Stephanie E. J., Raigani, Siavash, de Vries, Reiner J., Yeh, Heidi, Markmann, James F., and Uygun, Korkut
- Subjects
RATS ,LIVER ,OXYGEN consumption ,HISTOLOGY ,MACHINERY ,LIVER diseases ,PERFUSION - Abstract
Ex-vivo liver perfusion (EVLP) is an ideal platform to study liver disease, therapeutic interventions, and pharmacokinetic properties of drugs without any patient risk. Rat livers are an ideal model for EVLP due to less organ quality variability, ease of hepatectomy, well-defined molecular pathways, and relatively low costs compared to large animal or human perfusions. However, the major limitation with rat liver normothermic machine perfusion (NMP) is maintaining physiologic liver function on an ex-vivo machine perfusion system. To address this need, our research demonstrates 24-hour EVLP in rats under normothermic conditions. Early (6 hour) perfusate transaminase levels and oxygen consumption of the liver graft are shown to be good markers of perfusion success and correlate with viable 24-hour post-perfusion histology. Finally, we address overcoming challenges in long-term rat liver perfusions such as rising intrahepatic pressures and contamination, and offer future directions necessary to build upon our work. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
29. Pumping new life into old ideas: Preservation and rehabilitation of the liver using ex situ machine perfusion.
- Author
-
Raigani, Siavash, De Vries, Reinier J., Uygun, Korkut, and Yeh, Heidi
- Subjects
PERFUSION ,OXYGEN carriers ,ISOLATION perfusion ,LIVER ,LIVER transplantation ,SCIENTISTS ,REHABILITATION - Abstract
Recent advances in machine perfusion technology have reinvigorated the field of liver transplantation with the possibilities of vastly improving the efficiency and safety of the life‐saving procedure. With this improved preservation technology, transplant surgeons are now able to use previously untransplantable donor livers without significantly compromising patient outcomes. Early clinical studies demonstrate the ability to extend preservation times and assess a graft's potential viability using normothermic machine perfusion, in addition to restoring the energy supply in donor livers by supporting metabolism through circulation of vital nutrients and blood‐based oxygen carriers. Future endeavors for surgeons and scientists should focus on improving criteria to assess viability, optimizing protocols for perfusion research, investigating mechanisms of poor graft viability, and targeting these mechanisms with novel therapies to improve graft function prior to transplantation. Long‐term goals include extending preservation times on the scale of days to weeks, enabling long‐distance organ sharing, and establishing regional organ perfusion centers to streamline the procurement, perfusion, and transplantation process. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
30. Cell release during perfusion reflects cold ischemic injury in rat livers.
- Author
-
de Vries, Reinier J., Pendexter, Casie A., Cronin, Stephanie E. J., Marques, Beatriz, Hafiz, Ehab O. A., Muzikansky, Alona, van Gulik, Thomas M., Markmann, James F., Stott, Shannon L., Yeh, Heidi, Toner, Mehmet, Uygun, Korkut, and Tessier, Shannon N.
- Subjects
BIOMARKERS ,TRANSPLANTATION of organs, tissues, etc. ,LIVER cells ,ISCHEMIA ,LABORATORY rats - Abstract
The global shortage of donor organs has made it crucial to deeply understand and better predict donor liver viability. However, biomarkers that effectively assess viability of marginal grafts for organ transplantation are currently lacking. Here, we showed that hepatocytes, sinusoidal endothelial, stellate, and liver-specific immune cells were released into perfusates from Lewis rat livers as a result of cold ischemia and machine perfusion. Perfusate comparison analysis of fresh livers and cold ischemic livers showed that the released cell profiles were significantly altered by the duration of cold ischemia. Our findings show for the first time that parenchymal cells are released from organs under non-proliferative pathological conditions, correlating with the degree of ischemic injury. Thus, perfusate cell profiles could serve as potential biomarkers of graft viability and indicators of specific injury mechanisms during organ handling and transplantation. Further, parenchymal cell release may have applications in other pathological conditions beyond organ transplantation. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
31. Metabolic and lipidomic profiling of steatotic human livers during ex situ normothermic machine perfusion guides resuscitation strategies.
- Author
-
Raigani, Siavash, Karimian, Negin, Huang, Viola, Zhang, Anna M., Beijert, Irene, Geerts, Sharon, Nagpal, Sonal, Hafiz, Ehab O. A., Fontan, Fermin M., Aburawi, Mohamed M., Mahboub, Paria, Markmann, James F., Porte, Robert J., Uygun, Korkut, Yarmush, Martin, and Yeh, Heidi
- Subjects
METABOLIC profile tests ,UNSATURATED fatty acids ,LIVER ,LIPID metabolism ,PERFUSION ,RESUSCITATION - Abstract
There continues to be a significant shortage of donor livers for transplantation. One impediment is the discard rate of fatty, or steatotic, livers because of their poor post-transplant function. Steatotic livers are prone to significant ischemia-reperfusion injury (IRI) and data regarding how best to improve the quality of steatotic livers is lacking. Herein, we use normothermic (37°C) machine perfusion in combination with metabolic and lipidomic profiling to elucidate deficiencies in metabolic pathways in steatotic livers, and to inform strategies for improving their function. During perfusion, energy cofactors increased in steatotic livers to a similar extent as non-steatotic livers, but there were significant deficits in anti-oxidant capacity, efficient energy utilization, and lipid metabolism. Steatotic livers appeared to oxidize fatty acids at a higher rate but favored ketone body production rather than energy regeneration via the tricyclic acid cycle. As a result, lactate clearance was slower and transaminase levels were higher in steatotic livers. Lipidomic profiling revealed ω-3 polyunsaturated fatty acids increased in non-steatotic livers to a greater extent than in steatotic livers. The novel use of metabolic and lipidomic profiling during ex situ normothermic machine perfusion has the potential to guide the resuscitation and rehabilitation of steatotic livers for transplantation. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
32. The efficacy of HBOC‐201 in ex situ gradual rewarming kidney perfusion in a rat model.
- Author
-
Mahboub, Paria, Aburawi, Mohamed, Karimian, Negin, Lin, Florence, Karabacak, Murat, Fontan, Fermin, Tessier, Shannon N., Markmann, James, Yeh, Heidi, and Uygun, Korkut
- Subjects
PERFUSION ,KIDNEYS ,OXYGEN carriers ,GLOMERULAR filtration rate ,ADENOSINE triphosphate ,KIDNEY transplantation ,RATS - Abstract
Gradual rewarming from hypothermic to normothermic is a novel perfusion modality with superior outcome to sudden rewarming to normothermic. However, the identification of an oxygen carrier that could function at a temperature range from 4 to 7°C or whether it is necessary to use oxygen carrier during kidney rewarming, remains unresolved. This study was designed to test the use of a hemoglobin‐based oxygen carrier (HBOC) during gradual kidney rewarming as an alternative to simple dissolved oxygen. In this study, 10 rat kidneys were randomly divided into the control and the HBOC group. In the control group, no oxygen carrier was used during rewarming perfusion and the perfusion solution was oxygenated only by applying diffused carbogen flow. The protocol mimicked a donor after circulatory death (DCD) kidney transplantation, where after 30 minutes warm ischemia and 120 minutes cold storage in University of Wisconsin solution, the DCD kidneys underwent gradual rewarming from 10 to 37°C during 90 minutes with or without HBOC. This was followed by 30 minutes of warm ischemia in room temperature to mimic the anastomosis time and 120 minutes of reperfusion at 37°C to mimic the early post‐transplant state of the graft. The HBOC group demonstrated superior kidney function which was highlighted by higher ultrafiltrate production, better glomerular filtration rate and improved sodium reabsorption. There was no significant difference between the 2 groups regarding the hemodynamics, tissue injury, and adenosine triphosphate levels. In conclusion, this study suggests better renal function recovery in DCD kidneys after rewarming with HBOC compared to rewarming without an oxygen carrier. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
33. Ex vivo perfusion-based engraftment of genetically engineered cell sensors into transplantable organs.
- Author
-
Chin, Ling-Yee, Carroll, Cailah, Raigani, Siavash, Detelich, Danielle M., Tessier, Shannon N., Wojtkiewicz, Gregory R., Schmidt, Stephen P., Weissleder, Ralph, Yeh, Heidi, Uygun, Korkut, and Parekkadan, Biju
- Subjects
GRAFT rejection ,LIVER transplantation ,LIVER cells ,DETECTORS ,RADIONUCLIDE imaging ,HOMOGRAFTS ,RADIATION dosimetry - Abstract
Cellular rejection of liver transplant allografts remains a concern despite immunosuppressant use. Existing transplant biomarkers are often not sensitive enough to detect acute or chronic rejection at an early enough stage to allow successful clinical intervention. We herein developed a cell-based sensor that can potentially be used for monitoring local events following liver transplantation. Utilizing a machine perfusion system as a platform to engraft the cells into a donor liver, we effectively established the biocompatibility of the biosensor cells and confirmed efficient delivery of cells distributed throughout the organ. This work proves an innovative concept of integrating synthetic reporter cells ex vivo into organs as a transplant-within-a-transplant during functional organ preservation with a vision to use cell biosensors as a broad way to monitor and treat tissue transplants. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
34. Leveraging the zebrafish to model organ transplantation.
- Author
-
Cavalcante, Luciana Da Silveira, Toner, Mehmet, Uygun, Korkut, and Tessier, Shannon N.
- Published
- 2019
- Full Text
- View/download PDF
35. Supercooling extends preservation time of human livers.
- Author
-
de Vries, Reinier J., Tessier, Shannon N., Banik, Peony D., Nagpal, Sonal, Cronin, Stephanie E. J., Ozer, Sinan, Hafiz, Ehab O. A., van Gulik, Thomas M., Yarmush, Martin L., Markmann, James F., Toner, Mehmet, Yeh, Heidi, and Uygun, Korkut
- Abstract
The inability to preserve vascular organs beyond several hours contributes to the scarcity of organs for transplantation1,2. Standard hypothermic preservation at +4 °C (refs. 1,3) limits liver preservation to less than 12 h. Our group previously showed that supercooled ice-free storage at –6 °C can extend viable preservation of rat livers4,5 However, scaling supercooling preservation to human organs is intrinsically limited because of volume-dependent stochastic ice formation. Here, we describe an improved supercooling protocol that averts freezing of human livers by minimizing favorable sites of ice nucleation and homogeneous preconditioning with protective agents during machine perfusion. We show that human livers can be stored at –4 °C with supercooling followed by subnormothermic machine perfusion, effectively extending the ex vivo life of the organ by 27 h. We show that viability of livers before and after supercooling is unchanged, and that after supercooling livers can withstand the stress of simulated transplantation by ex vivo normothermic reperfusion with blood. Preservation of human livers at subzero temperatures with ice-free supercooling extends ex vivo organ life. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
36. Exploring donor demographics effects on hepatocyte yield and viability: Results of whole human liver isolation from one center.
- Author
-
Geerts, Sharon, Ozer, Sinan, Chu, Chris, Fuchs, Bryan C., Tanabe, Kenneth K., Yeh, Heidi, and Uygun, Korkut
- Subjects
LIVER ,DEMOGRAPHIC surveys ,LIVER cells ,LIVER transplantation ,CELL survival ,CLINICAL indications - Abstract
Due to the growth of cell-based therapeutic alternatives addressing the shortage of livers for transplant, there is necessity for a reliable source of human hepatocytes. In addition, pharmaceutical research often requires human hepatocytes to assess new drug therapies during development or to achieve FDA approval. Whole human livers producing large quantities of cells from the same donor are ideal, enhancing reproducibility for all purposes, while also allowing for capturing variances in drug-metabolism across different demographics for pharmaceutical testing and development but are limited in availability and quality for research purposes. The present study investigates the effect of donor and liver procurement factors of 16 human livers on cell viability and yield, showing that typical exclusion criteria for transplant still produce viable hepatocytes with significant yields. Although limited in number of data points, which should be taken into consideration, the conclusions of this study could be utilized as indications, allowing for expansion of liver selection criteria for hepatocyte isolation and provide the necessary quality hepatocytes in large quantities for the growing pharmaceutical, biomedical, and therapeutic research fields. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
37. Specific Patterns of Postoperative Temperature Elevations Predict Blood Infection in Pediatric Burn Patients.
- Author
-
Poster, Jonah, Chu, Chris, Weber, Joan M., Lydon, Martha, Dylewski, Maggie, Uygun, Korkut, and Sheridan, Robert L.
- Subjects
BURN patients ,POSTOPERATIVE period ,BURN care units ,ALTITUDES ,BLOOD - Abstract
Using readily available temperature data, we seek to propose a scoring criteria that can facilitate accurate and immediate prediction of blood infection. The standard in diagnosing blood infection is a positive blood culture result that may take up to 3 days to process, requiring providers to make a prediction about which febrile patient is actually bacteremic. This prediction is difficult in burned children as systemic inflammation can cause fever in the absence of infection. An ability to make this prediction more accurate using readily available information would be useful. A retrospective chart review was performed for 28 pediatric patients, with a burn size 20% or greater, admitted to the burn unit between 2010 and 2014. All children had blood cultures drawn. They were divided into either infection (positive blood cultures) or control (negative blood cultures) groups. Median temperature and mean number of temperature elevations were compared between the two groups. We evaluated the predictive accuracy of using temperature elevation, pattern, and timing to predict blood infection. A significant difference was seen in the mean number of temperature elevations above 39°C. This was significant for each time stage, especially in the 0- to 24-hour post-surgery period. We found the most predictive accuracy in the 0- to 12-, 12- to 38-, and 12- to 48-hour time periods. We found a strong association between mean number of fever spikes above 39°C and blood infection, especially 12 to 24 hours after surgery. This readily available data can be useful to clinicians as they access children with burns. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
38. Oxygenated UW Solution Decreases ATP Decay and Improves Survival After Transplantation of DCD Liver Grafts.
- Author
-
Martins, Paulo N., Berendsen, Timothy A., Yeh, Heidi, Bruinsma, Bote G., Izamis, Maria-Louisa, Op den Dries, Sanna, Gillooly, Andrew R., Porte, Robert, Yarmush, Martin L., Uygun, Korkut, and Markmann, James F.
- Published
- 2019
- Full Text
- View/download PDF
39. Advances in machine perfusion, organ preservation, and cryobiology: potential impact on vascularized composite allotransplantation.
- Author
-
Burlage, Laura C., Tessier, Shannon N., Etra, Joanna W., Uygun, Korkut, and Brandacher, Gerald
- Published
- 2018
- Full Text
- View/download PDF
40. A highly-occupied, single-cell trapping microarray for determination of cell membrane permeability.
- Author
-
Weng, Lindong, Ellett, Felix, Edd, Jon, Wong, Keith H. K., Uygun, Korkut, Irimia, Daniel, Stott, Shannon L., and Toner, Mehmet
- Subjects
MICROARRAY technology ,CELL membranes ,PERMEABILITY ,MICROFLUIDICS ,NUMERICAL analysis - Abstract
Semi- and selective permeability is a fundamentally important characteristic of the cell membrane. Membrane permeability can be determined by monitoring the volumetric change of cells following exposure to a non-isotonic environment. For this purpose, several microfluidic perfusion chambers have been developed recently. However, these devices only allow the observation of one single cell or a group of cells that may interact with one another in an uncontrolled way. Some of these devices have integrated on-chip temperature control to investigate the temperature-dependence of membrane permeability, but they inevitably require sophisticated fabrication and assembly, and delicate temperature and pressure calibration. Therefore, it is highly desirable to design a simple single-cell trapping device that allows parallel monitoring of multiple separate, individual cells subjected to non-isotonic exposure at various temperatures. In this study, we developed a pumpless, single-layer microarray with high trap occupancy of single cells. The benchmark performance of the device was conducted by targeting spherical particles of 18.8 μm in diameter as a model, yielding trap occupancy of up to 86.8% with a row-to-row shift of 10–30 μm. It was also revealed that in each array the particles larger than a corresponding critical size would be excluded by the traps in a deterministic lateral displacement mode. Demonstrating the utility of this approach, we used the single-cell trapping device to determine the membrane permeability of rat hepatocytes and patient-derived circulating tumor cells (Brx-142) at 4, 22 and 37 °C. The membrane of rat hepatocytes was found to be highly permeable to water and small molecules such as DMSO and glycerol, via both lipid- and aquaporin-mediated pathways. Brx-142 cells, however, displayed lower membrane permeability than rat hepatocytes, which was associated with strong coupling of water and DMSO transport but less interaction between water and glycerol. The membrane permeability data reported here provide new insights into the biophysics of membrane transport such as aquaporin expression and coupling transport of water and solutes, as well as providing essential data for the ultimate goal of biobanking rare cells and precious tissues. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
41. A novel model for ex situ reperfusion of the human liver following subnormothermic machine perfusion.
- Author
-
Avruch, James H., Bruinsma, Bote G., Weeder, Pepijn D., Sridharan, Gautham V., Porte, Robert J., Yeh, Heidi, Markmann, James F., and Uygun, Korkut
- Subjects
LIVER transplantation ,PRESERVATION of organs, tissues, etc. ,REPERFUSION ,TUMOR necrosis factors ,OXYGEN consumption - Abstract
Machine perfusion-based organ preservation techniques are prudently transitioning into clinical practice. Although experimental data is compelling, the outcomes in the highly variable clinical donation-transplantation setting are unpredictable. Here, we offer an intermediate tool for pre-clinical assessment of human donor livers. We present a model for ex situ reperfusion of discarded human livers and report on its application in three human livers that have undergone subnormothermic (21°C) machine perfusion as an experimental preservation method. During reperfusion, the livers macroscopically reperfused in the first 15 minutes, and remained visually well-perfused for 3 hours of ex situ reperfusion. Bile production and oxygen consumption were observed throughout ex situ reperfusion. ATP levels increased 4.25-fold during SNMP. Between the end of SNMP and the end of reperfusion ATP levels dropped 45%. ALT levels in blood increased rapidly in the first 30 minutes and ALT release continued to taper off towards the end of perfusion. Release of CRP, TNF-, IL-1, and IL-12, IFN- was sustained during reperfusion. These findings support the use of this model for the evaluation of novel human liver preservation techniques. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
42. Metabolomic Modularity Analysis (MMA) to Quantify Human Liver Perfusion Dynamics.
- Author
-
Sridharan, Gautham Vivek, Bruinsma, Bote Gosse, Bale, Shyam Sundhar, Swaminathan, Anandh, Saeidi, Nima, Yarmush, Martin L., and Uygun, Korkut
- Subjects
METABOLOMICS ,LIVER diseases ,BIOCHEMISTRY ,COFACTORS (Biochemistry) ,PARALLEL computers - Abstract
Large-scale-omics data are now ubiquitously utilized to capture and interpret global responses to perturbations in biological systems, such as the impact of disease states on cells, tissues, and whole organs. Metabolomics data, in particular, are difficult to interpret for providing physiological insight because predefined biochemical pathways used for analysis are inherently biased and fail to capture more complex network interactions that span multiple canonical pathways. In this study, we introduce a nov-el approach coined Metabolomic Modularity Analysis (MMA) as a graph-based algorithm to systematically identify metabolic modules of reactions enriched with metabolites flagged to be statistically significant. A defining feature of the algorithm is its ability to determine modularity that highlights interactions between reactions mediated by the production and consumption of cofactors and other hub metabolites. As a case study, we evaluated the metabolic dynamics of discarded human livers using time-course metabolomics data and MMA to identify modules that explain the observed physiological changes leading to liver recovery during subnormothermic machine perfusion (SNMP). MMA was performed on a large scale liver-specific human metabolic network that was weighted based on metabolomics data and identified cofactor-mediated modules that would not have been discovered by traditional metabolic pathway analyses. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
43. 121. Acellular Subnomothermic Machine Perfusion of Fasciocutaneous Flaps in Swine.
- Author
-
Berkane, Yanis, Lellouch, Alexandre G., Shamlou, Austin A., Goutard, Marion, Tawa, Pierre, Uygun, Basak E., Randolph, Mark A., Cetrulo Jr., Curtis L., and Uygun, Korkut
- Published
- 2023
- Full Text
- View/download PDF
44. Multi-omic network-based interrogation of rat liver metabolism following gastric bypass surgery featuring SWATH proteomics.
- Author
-
Sridharan, Gautham Vivek, D'Alessandro, Matthew, Bale, Shyam Sundhar, Bhagat, Vicky, Gagnon, Hugo, Asara, John M., Uygun, Korkut, Yarmush, Martin L., and Saeidi, Nima
- Published
- 2017
- Full Text
- View/download PDF
45. Peritransplant Energy Changes and Their Correlation to Outcome After Human Liver Transplantation.
- Author
-
Bruinsma, Bote G., Avruch, James H., Sridharan, Gautham V., Weeder, Pepijn D., Jacobs, Marie Louise, Crisalli, Kerry, Amundsen, Beth, Porte, Robert J., Markmann, James F., Uygun, Korkut, and Yeh, Heidi
- Published
- 2017
- Full Text
- View/download PDF
46. Subzero organ preservation: the dawn of a new ice age?
- Author
-
Bruinsma, Bote G. and Uygun, Korkut
- Published
- 2017
- Full Text
- View/download PDF
47. Liver ex situ machine perfusion preservation: A review of the methodology and results of large animal studies and clinical trials.
- Author
-
Marecki, Hazel, Bozorgzadeh, Adel, Porte, Robert J., Leuvenink, Henri G., Uygun, Korkut, and Martins, Paulo N.
- Published
- 2017
- Full Text
- View/download PDF
48. Increasing Donor Liver Utilization Through Machine Perfusion.
- Author
-
Yeh, Heidi, Uygun, Korkut, Corey, Kathleen E., and Malhi, Harmeet
- Published
- 2019
- Full Text
- View/download PDF
49. A Novel Digital Algorithm for Identifying Liver Steatosis Using Smartphone-Captured Images.
- Author
-
Xu, Katherine, Raigani, Siavash, Shih, Angela, Baptista, Sofia G., Rosales, Ivy, Parry, Nicola M., Shroff, Stuti G., Misdraji, Joseph, Uygun, Korkut, Yeh, Heidi, Fairchild, Katherine, and Anne Dageforde, Leigh
- Published
- 2022
- Full Text
- View/download PDF
50. Warm Ischemic Injury Is Reflected in the Release of Injury Markers during Cold Preservation of the Human Liver.
- Author
-
Bruinsma, Bote G., Wu, Wilson, Ozer, Sinan, Farmer, Adam, Markmann, James F., Yeh, Heidi, and Uygun, Korkut
- Subjects
LIVER transplantation ,ISCHEMIA ,LIVER disease treatment ,LIVER biopsy ,LACTATE dehydrogenase ,HEALTH outcome assessment - Abstract
Background: Liver transplantation plays a pivotal role in the treatment of patients with end-stage liver disease. Despite excellent outcomes, the field is strained by a severe shortage of viable liver grafts. To meet high demands, attempts are made to increase the use of suboptimal livers by both pretransplant recovery and assessment of donor livers. Here we aim to assess hepatic injury in the measurement of routine markers in the post-ischemic flush effluent of discarded human liver with a wide warm ischemic range. Methods: Six human livers discarded for transplantation with variable warm and cold ischemia times were flushed at the end of preservation. The liver grafts were flushed with NaCl or Lactated Ringer’s, 2 L through the portal vein and 1 L through the hepatic artery. The vena caval effluent was sampled and analyzed for biochemical markers of injury; lactate dehydrogenase (LDH), alanine transaminase (ALT), and alkaline phosphatase (ALP). Liver tissue biopsies were analyzed for ATP content and histologically (H&E) examined. Results: The duration of warm ischemia in the six livers correlated significantly to the concentration of LDH, ALT, and ALP in the effluent from the portal vein flush. No correlation was found with cold ischemia time. Tissue ATP content at the end of preservation correlated very strongly with the concentration of ALP in the arterial effluent (P<0.0007, R
2 = 0.96). Conclusion: Biochemical injury markers released during the cold preservation period were reflective of the duration of warm ischemic injury sustained prior to release of the markers, as well as the hepatic energy status. As such, assessment of the flush effluent at the end of cold preservation may be a useful tool in evaluating suboptimal livers prior to transplantation, particularly in situations with undeterminable ischemic durations. [ABSTRACT FROM AUTHOR]- Published
- 2015
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.