455 results on '"Santana JA"'
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2. The exposome impact on hair health: non-pharmacological management. Part II ⋆ .
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Cedirian S, Prudkin L, Santana JA, Piquero-Casals J, Saceda-Corralo D, and Piraccini BM
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Hair holds a significance that surpasses mere aesthetics, as it plays a pivotal role in our social interactions and contributes significantly to the definition of our self-esteem. Central to this understanding is the concept of the exposome, which encompasses intrinsic elements like genetics and physiological changes, as well as extrinsic factors such as UV radiation, pollution, lifestyle choices, and chemical treatments. These factors may significantly impact hair health and hair aging. Expanding upon the groundwork laid by the first part of this research (Cedirian et al., 2024), this study aims to deepen our understanding of exposome influence on hair. Specifically, through a narrative review of current literature, this second part endeavors to provide non-pharmacological treatment solutions and effective strategies to mitigate the negative impact of the exposome on hair health., (Copyright © 2024. Published by Elsevier España, S.L.U.)
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- 2025
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3. Variables associated with days of school missed following concussion: results from the Sport Concussion Outcomes in PEdiatrics (SCOPE) study.
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Roberts J, Wilson JC, Halstead ME, Miller SM, Santana JA, Valovich McLeod TC, Zaslow TL, Master CL, Grady MF, Snedden TR, Fazekas ML, Coel RA, and Howell DR
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- Humans, Adolescent, Female, Male, Prospective Studies, Child, United States epidemiology, Absenteeism, Schools, Brain Concussion, Athletic Injuries
- Abstract
Objective: To understand factors associated with missed academic time after concussion to improve support for patients. Our goal was to assess patient-specific predictors of total school time lost after pediatric/adolescent concussion., Study Design: We performed a prospective cohort study of children and adolescents (8-18 years of age) seen within 14 days of concussion from seven pediatric medical centers across the United States. We collected outcomes via the Concussion Learning Assessment & School Survey (CLASS) and constructed a multivariable predictive model evaluating patient factors associated with school time loss., Results: 167 patients participated (mean age = 14.5 ± 2.2 years; 46% female). Patients were assessed initially at 5.0 ± 3.0 days post-injury and had a final follow-up assessment 24.5 ± 20.0 days post-concussion. Participants missed a median of 2 days of school (IQR = 0.5-4), and 21% reported their grades dropped after concussion. Higher initial symptom severity rating (β = 0.06, 95% CI = 0.03-0.08, p < 0.001) and perception of grades dropping after concussion (β = 1.37, 95% CI = 0.28-2.45, p = 0.01) were significantly associated with more days of school time missed after concussion. Those who reported their grades dropping reported missing significantly more school (mean = 5.0, SD = 4.7 days missed of school) than those who reported their grades did not drop (mean = 2.2, SD = 2.6 days missed of school; p < 0.001; Cohen's d = 0.87)., Conclusions: Children and adolescents reported missing a median of 2 days of school following concussion, and more missed school time after a concussion was associated with more severe concussion symptoms and perception of grades dropping. These findings may support recommendations for minimal delays in return-to-learn after concussion.
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- 2024
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4. Occurrence, genetic diversity, and antimicrobial resistance of methicillin-resistant Staphylococcus spp. in hospitalized and non-hospitalized cats in Brazil.
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Souza TGV, Santana JA, Claudino MMS, Pereira ST, Xavier RGC, do Amarante VS, de Castro YG, Dorneles EMS, Aburjaile FF, de Carvalho VA, Brenig B, and Silva ROS
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- Animals, Cats microbiology, Brazil, Anti-Bacterial Agents pharmacology, Staphylococcus genetics, Staphylococcus drug effects, Staphylococcus isolation & purification, Methicillin-Resistant Staphylococcus aureus genetics, Methicillin-Resistant Staphylococcus aureus drug effects, Methicillin-Resistant Staphylococcus aureus isolation & purification, Female, Microbial Sensitivity Tests, Male, RNA, Ribosomal, 16S genetics, Methicillin Resistance genetics, Hospitalization, Bacterial Proteins genetics, Multilocus Sequence Typing, Staphylococcal Infections microbiology, Staphylococcal Infections veterinary, Staphylococcal Infections epidemiology, Cat Diseases microbiology, Genetic Variation
- Abstract
Methicillin-resistant Staphylococci (MRS) cause infections at various sites and exhibit multidrug resistance. Despite their importance in veterinary medicine, only little is known about Staphylococcus spp. colonizing and infecting cats. Therefore, in this study, we aimed to isolate and identify Staphylococcus spp. colonizing hospitalized and non-hospitalized domestic cats and analyze their antimicrobial resistance profiles, genetic diversity, and risk factors associated with MRS colonization. A total of 218 oral and axillary swabs were obtained from 109 cats, including 77 non-hospitalized and 32 hospitalized cats. After plating on selective media, the isolates were identified via matrix-assisted laser desorption/ionization time-of-flight mass spectrometry and rpoB and 16S rRNA gene sequencing. Subsequently, antimicrobial sensitivity of the strains was assessed, and they were screened for mecA gene. Methicillin-resistant S. haemolyticus (MRSH) isolates were subjected to multilocus sequence typing, whereas methicillin-resistant S. pseudintermedius (MRSP) and S. felis isolates were subjected to whole genome sequencing. S. felis was most commonly isolated from non-hospitalized cats (28.1%), whereas S. pseudintermedius and MRS were commonly isolated from hospitalized cats (25%). MRSH isolates from hospitalized animals were classified as ST3. The identified MRSP strains belonged to two well-known sequence types, ST551 and ST71. Moreover, antimicrobial use (p = 0.0001), hospitalization (p = 0.0141), and comorbidities (p = 0.002) were associated with increased MRS prevalence in cats., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2024 Souza et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2024
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5. Tunable polymer-peptide hybrids for dentin tissue repair.
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Toledano M, Fernández-Romero E, Aguilera FS, Osorio E, Rodríguez-Santana JA, Garrido M, Solís PA, García-Godoy F, and Osorio R
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- Humans, Polymers chemistry, Materials Testing, Peptides chemistry, Collagen, Surface Properties, Hardness, Dentin drug effects, Nanoparticles chemistry, Tooth Remineralization methods, Spectrum Analysis, Raman
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Objectives: This study targets to assess the remineralization capability of conditioned dentin infiltrated with polymeric nanoparticles (NPs) doped with tideglusib (TDg) (TDg-NPs)., Methods: Dentin conditioned surfaces were infiltrated with NPs and TDg-NPs. Bonded interfaces were created, stored for 24 h and submitted to mechanical and thermal challenging. Resin-dentin interfaces were evaluated through nanohardness, Masson's trichrome staining microscopy, and Raman analysis., Results: Dentin surfaces treated with TDg-NPs and load cycled produced higher nanohardness than the rest of the groups at the hybrid layer. At the bottom of the hybrid layer, all samples treated with TDg-NPs showed higher nanohardness than the rest of the groups. Active remineralization underneath the hybrid layer was detected in all groups after TDg application and load cycling, inducting new dentinal tubuli formation. After thermocycling, remineralization at the hybrid layer was not evidenced in the absence of NPs. Raman analysis showed increase mineralization, enriched carbonate apatite formation, and improved crosslinking and scaffolding of the collagen., Conclusions: Mechanical loading on the specimens obtained after TDg-NPs dentin infiltration inducts an increase of mineralization at the resin/dentin interface, indicating remineralization of peritubular and intertubular dentin with augmented crystallographic maturity in crystals. Enriched collagen quality was produced, generating an adequate matrix organization to promote apatite nucleation, after tideglusib infiltration., Clinical Significance: At the present research, it has been proved the creation of reparative dentin, at the resin-dentin interface, after tideglusib dentin infiltration. Chemical stability, to favor integrity of the resin-dentin interface, is warranted in the presence of the TDg-NPs in the demineralized dentin collagen., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024. Published by Elsevier Ltd.)
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- 2024
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6. ANTIMICROBIAL SUSCEPTIBILITY OF STAPHYLOCOCCUS SPP. ISOLATED FROM FELIDS AND CANIDS IN BELO HORIZONTE ZOO, BRAZIL.
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de Alcântara LP, Santana JA, Clark Xavier RG, Tinoco HP, Coelho CM, Dos Santos DO, Santos RL, Nogueira de Carvalho MP, and Silveira Silva RO
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- Humans, Animals, Brazil epidemiology, RNA, Ribosomal, 16S, Staphylococcus, Anti-Bacterial Agents pharmacology, Microbial Sensitivity Tests veterinary, Staphylococcal Infections epidemiology, Staphylococcal Infections veterinary, Wolves genetics, Anti-Infective Agents, Canidae genetics
- Abstract
The epidemiology of Staphylococcus spp. has become a major concern among humans and animals due to increasing antimicrobial resistance and frequent reports of infection. Despite the importance of animals as reservoirs for staphylococci, little is known about the epidemiology of Staphylococcus spp. in most nondomestic species, including canids and felids. This study evaluated the frequency, distribution, and patterns of antimicrobial resistance of staphylococcal species isolated from captive felids and canids from Belo Horizonte Zoo, Brazil. Rectal, oral, and nasal swabs from apparently healthy maned wolves ( Chrysocyon brachyurus , n = 7), a lion ( Panthera leo , n = 1), jaguars ( Panthera onca , n = 3), and one swab of a cougar ( Puma concolor ) with an ear infection were streaked onto mannitol salt agar. Colonies identified by matrix-assisted laser desorption/ionization-time of flight mass spectrometry, polymerase chain reaction for the Staphylococcus intermedius group (SIG), and 16S rRNA gene sequencing. Isolates were subjected to antimicrobial susceptibility tests and Staphylococcus pseudintermedius strains were subjected to multilocus sequence typing. Staphylococcus species were isolated from 24 of the 34 samples (70.6%). Among the isolated strains, S. pseudintermedius and Staphylococcus felis were the most frequent species (41.7 and 25%, respectively). Five novel sequence types were identified among the S. pseudintermedius isolates. Resistance to tetracycline (7/24, 29.2%) or penicillin (6/23, 26.1%) was significantly higher than the other antimicrobial agents tested ( P < 0.05). One isolate, Staphylococcus nepalensis , was positive for mecA and resistant to five antimicrobials, and was thus classified as multidrug-resistant. The present work suggests that maned wolves are natural hosts of SIG and also reports the isolation of S. felis in sick and healthy, captive, nondomestic carnivores. The isolated staphylococci were susceptible to most classes of antimicrobials tested. However, the multidrug-resistance capability of an S. nepalensis strain reinforces the hypothesis that felids and canids act as reservoirs of pathogens with antimicrobial resistance.
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- 2023
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7. DISTRIBUTION AND ANTIMICROBIAL RESISTANCE OF STAPHYLOCOCCI ISOLATED FROM FREE-LIVING SOUTH AMERICAN COATI ( NASUA NASUA ) IN AN URBAN PARK IN MINAS GERAIS, BRAZIL.
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Santana JA, Zanon IP, Sarsur Ribeirode Freitas RJ, Viegas FM, de Campos BH, Bicalho GC, de Almeida LR, Hemetrio NS, Nogueira de Carvalho MP, and Silveira Silva RO
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- Animals, Staphylococcus, Anti-Bacterial Agents pharmacology, Brazil epidemiology, Parks, Recreational, RNA, Ribosomal, 16S, Drug Resistance, Bacterial, Procyonidae, Staphylococcal Infections veterinary
- Abstract
The scientific information regarding staphylococci in procyonids is scarce. Hence, the aim of this study was to evaluate the frequency, distribution, and pattern of antimicrobial resistance of staphylococcal species isolated from free-roaming coatis ( Nasua nasua ) in an urban park in Belo Horizonte, Minas Gerais, Brazil. Rectal swabs from 55 free-living coatis were plated onto mannitol salt agar for isolating staphylococci, and species were identified using matrix-assisted laser desorption/ionization-time of flight mass spectrometry, polymerase chain reaction (PCR) of nuc , and sequencing of 16S rRNA and rpoB when needed. Antimicrobial susceptibility was investigated using the disk diffusion method, and the presence of the mecA gene was investigated by PCR. A total of 72.7% of the animals tested positive for staphylococci. Nine different species were identified, and Staphylococcus intermedius (60.4%) and S. delphini (20.9%) were the most frequently isolated species. Most of the isolates were susceptible to most of the antimicrobials evaluated, with a resistance pattern seen for penicillin (13.9%). One isolate was multidrug-resistant (MDR). The present study suggests that coatis are natural hosts of S. intermedius and S. delphini and, despite living in a heavily anthropized environment, the Staphylococcus spp. isolates showed a low incidence of drug resistance.
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- 2023
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8. Simulation of a Composite with a Polyhydroxybutyrate (PHB) Matrix Reinforced with Cylindrical Inclusions: Prediction of Mechanical Properties.
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Gómez-Gast N, Rivera-Santana JA, Otero JA, and Vieyra H
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Biocomposite development, as a sustainable alternative to fossil-derived materials with diverse industrial applications, requires expediting the design process and reducing production costs. Simulation methods offer a solution to these challenges. The main aspects to consider in simulating composite materials successfully include accurately representing microstructure geometry, carefully selecting mesh elements, establishing appropriate boundary conditions representing system forces, utilizing an efficient numerical method to accelerate simulations, and incorporating statistical tools like experimental designs and re-regression models. This study proposes a comprehensive methodology encompassing these aspects. We present the simulation using a numerical homogenization technique based on FEM to analyze the mechanical behavior of a composite material of a polyhydroxybutyrate (PHB) biodegradable matrix reinforced with cylindrical inclusions of flax and kenab. Here, the representative volume element (RVE) considered the geometry, and the numerical homogenization method (NHM) calculated the macro-mechanical behavior of composites. The results were validated using the asymptotic homogenization method (AHM) and experimental data, with error estimations of 0.0019% and 7%, respectively. This model is valuable for predicting longitudinal and transverse elastic moduli, shear modulus, and Poisson's coefficient, emphasizing its significance in composite materials research.
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- 2023
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9. Utility of a Clinical Prediction Tool for Persisting Postconcussive Symptoms in a Multicenter Sample of Youth Athletes With Concussion: The Sport Concussion Outcomes in Pediatrics (SCOPE) Study.
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Miller SM, Valovich McLeod TC, Zaslow TL, Wilson JC, Master CL, Snedden TR, Halstead ME, Grady MF, Fazekas ML, Santana JA, Coel RA, and Howell DR
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- Humans, Child, Female, Adolescent, Infant, Newborn, Male, Cohort Studies, Athletes, Post-Concussion Syndrome diagnosis, Athletic Injuries complications, Athletic Injuries diagnosis, Brain Concussion complications, Brain Concussion diagnosis, Sports
- Abstract
Background: A validated clinical risk tool has been developed to identify pediatric and adolescent patients at risk of developing persisting symptoms after concussion, but has not been prospectively investigated within a sample of athletes seen after concussion by primary care sports medicine physicians and/or athletic trainers., Purpose: To determine whether a validated clinical risk prediction tool for persistent postconcussive symptoms (PPCSs) predicted which patients would develop PPCSs when obtained within 14 days of concussion among a multicenter sample of adolescent athletes., Study Design: Cohort study; Level of evidence, 2., Methods: Pediatric and adolescent patients (8-18 years of age) from 7 pediatric medical centers and 6 secondary school athletic training facilities who were diagnosed with a concussion and presented ≤14 days after concussion were enrolled as part of the Sport Concussion Outcomes in Pediatrics (SCOPE) study during their initial visit and were followed until symptom resolution. Clinical risk scores (Predicting and Preventing Post-concussive Problems in Pediatrics [5P]) and total symptom severity were obtained using the Post-Concussion Symptom Inventory at the initial visit (mean, 4.9 ± 2.9 days after concussion). Participants were then compared based on symptom resolution time: PPCS group (≥28 days to symptom resolution) and no-PPCS group (<28 days). The authors assessed the odds of developing PPCSs based on the 5P risk score using a binary logistic regression model and the utility of the clinical risk prediction tool to identify total time to symptom resolution using a Cox proportional hazards model., Results: A total of 184 participants enrolled, underwent initial evaluation, and were followed until symptom resolution (mean age, 15.2 ± 2.1 years; 35% female). The mean time to symptom resolution across the entire sample was 17.6 ± 3.7 days; 16% (n = 30) of participants developed PPCS. Those in the PPCS group had significantly greater mean initial total 5P risk scores than those in the no-PPCS group (7.9 ± 1.7 vs 5.9 ± 2.3, respectively; P < .001). After adjustment for initial symptom severity, time to assessment, and assessment setting, a higher initial total 5P risk score was associated with a significantly greater odds of developing PPCSs (adjusted odds ratio, 1.49; 95% CI, 1.07-2.08; P = .019). Furthermore, a higher 5P risk score was significantly associated with longer total symptom resolution time (hazard ratio, 0.80; 95% CI, 0.74-0.88; P < .001)., Conclusion: In a multicenter sample of youth athletes seen in different outpatient health care settings, the 5P risk score accurately predicted which athletes may be at risk for developing PPCSs., Competing Interests: One or more of the authors has declared the following potential conflict of interest or source of funding: This study was supported by the Pediatric Research in Sports Medicine (PRiSM) Society Research Interest Group initiative (PRiSM Concussion RIG). The database in this investigation was managed through a REDCap award (National Institutes of Health/National Center for Advancing Translational Sciences [NCATS] Colorado Clinical and Translational Science Award [CTSA] grant No. UL1 TR002535), contents are the authors’ sole responsibility and do not necessarily represent official NIH views. S.M.M. serves on the USA Cheer Safety Council and as an assistant team physician for the Dallas Stars National Hockey League Hockey Club. T.C.V.M. serves on the USA Swimming Concussion Task Force and the National Football League Head, Neck, and Spine Committee. J.C.W. has received research support from the Eunice Kennedy Shriver National Institute of Child Health & Human Development (R01HD108133) and is a network team physician for US Soccer. C.L.M. has received research funding from the National Institute of Neurologic Diseases and Stroke (5R01NS097549-06), National Eye Institute (1R34EY030582-01A1, 2R01EY023261-06), National Institute for Nursing Research (5R01NR018425-03), Centers for Disease Control and Prevention (1U01CE003479-01-00), Department of Defense (W81XWH21C0103, W81XWH2210590), Chuck Noll Foundation, Children’s Hospital of Philadelphia Frontier Programs, and American Medical Society for Sports Medicine. She serves in an uncompensated role as the concussion physician for Shipley School; on the medical advisory boards for Untold Foundation, Pink Concussions, and Headway Foundation; and on the board of trustees for the American College of Sports Medicine, the board of directors for the American Medical Society for Sports Medicine and Pediatric Research in Sports Medicine, and the executive committee of the Committee on Sports Medicine and Fitness for the American Academy of Pediatrics. M.E.H. is the venue medical director for the St Louis City SC Major League Soccer team. R.A.C. serves as team physician for the World Surf League and is a volunteer medical consultant and speaker for Hawai’i Concussion Awareness Management Program. D.R.H. has received research support from the Eunice Kennedy Shriver National Institute of Child Health & Human Development (R03HD094560, R01HD108133), the National Institute of Neurological Disorders And Stroke (R01NS100952, R43NS108823), the National Institute of Arthritis and Musculoskeletal and Skin Diseases (1R13AR080451), 59th Medical Wing Department of the Air Force, MINDSOURCE Brain Injury Network, the Tai Foundation, the Colorado Clinical and Translational Sciences Institute (UL1 TR002535?05), and the Denver Broncos Foundation. AOSSM checks author disclosures against the Open Payments Database (OPD). AOSSM has not conducted an independent investigation on the OPD and disclaims any liability or responsibility relating thereto.
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- 2023
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10. Equine Brucellosis: Current Understanding and Challenges.
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Dorneles EMS, Santana JA, Costa ACTRB, Junqueira DG Júnior, Heinemann MB, and Lage AP
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- Male, Female, Horses, Animals, Humans, Cattle, Swine, Equidae, Risk Factors, Brucellosis diagnosis, Brucellosis epidemiology, Brucellosis veterinary, Cattle Diseases, Horse Diseases, Swine Diseases
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Brucellosis in equines, including horses, donkeys, and mules, is characterized by abscesses in tendons, bursae, and joints. Reproductive disorders, which are common in other animals, are rare in both males and females. Joint breeding of horses, cattle, and pigs was found as the main risk factor for equine brucellosis, with the transmission from equines to cattle or among equines possible, although unlikely. Hence, evaluation of the disease in equines can be considered an indirect indicator of the effectiveness of brucellosis control measures employed for other domestic species. Generally, the disease in equines reflects disease status in the sympatric domestic species, mainly cattle. It is important to note that in equines, the disease has no validated diagnostic test, which limits the interpretation of available data. Finally, it is important to mention that equines also represent significant Brucella spp. infection sources for humans. Considering the zoonotic aspect of brucellosis, the significant losses due to infection, and the representativeness of horses, mules, and donkeys in the society, as well as the continuous efforts to control and eradicate the disease in livestock, in this review, we covered the various aspects of brucellosis in equines and compile the sparse and diffuse information on the subject., (Copyright © 2023. Published by Elsevier Inc.)
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- 2023
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11. Risk Factors, Genetic Diversity, and Antimicrobial Resistance of Staphylococcus spp. Isolates in Dogs Admitted to an Intensive Care Unit of a Veterinary Hospital.
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Santana JA, Paraguassu AO, Santana RST, Xavier RGC, Freitas PMC, Aburjaile FF, Azevedo VAC, Brenig B, Bojesen AM, and Silva ROS
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Intensive Care Units (ICU) usually provide an excellent environment for the selection of pathogens associated with hospital-acquired infections (HAI), leading to increased mortality and hospitalization costs. Methicillin-resistant Staphylococcus pseudintermedius (MRSP) is a major cause of HAI in dogs worldwide, but the risk factors and dynamics of colonization by MRSP are largely unknown. This study aimed to evaluate the risk factors associated with the acquisition of MRSP in dogs admitted to an ICU, and to report the antimicrobial resistance profiles and genetic relatedness of MRSP isolates. Sterile swabs from the nostril, axilla, and rectum were collected daily during the hospitalization of 54 dogs. Samples were subjected to Mannitol Salt Agar, and colonies were identified by MALDI-ToF, polymerase chain reaction (PCR), and sequencing of the rpoB gene. Antimicrobial susceptibility testing and PCR detection of mecA were performed. Staphylococcus spp. was isolated from 94% of the dogs, and the most frequently isolated species was S. pseudintermedius (88.2%). Carriage of multidrug resistant (MDR) staphylococci was observed in 64.4% of the dogs, and approximately 39% had methicillin-resistant Staphylococcus sp. (MRS), of which 21.6% had MRSP and 1.9% had methicillin-resistant S. aureus (MRSA). The acquisition of MRSP during ICU hospitalization was associated with sex (female), age (>7 years), and dogs that had previously been treated with antimicrobials. Animals colonized by MRSP resistant to ≥9 antimicrobial classes had longer hospital stays than those colonized by other MRS strains. Among the 13 MRSP isolates that were subjected to whole-genome sequencing, ten were classified as ST71. A single nucleotide polymorphism (SNP) analysis revealed three clones, including one that was detected in infected dogs outside the ICU. This study indicates novel risk factors associated with colonization by MRSP. The detection of the same MRSP clone causing HAI outside the ICU reinforces the need for improved infection prevention and control practices at veterinary hospitals in general and at the ICU in particular.
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- 2023
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12. Checklist of parasites associated with 'reptiles' in Northeast Brazil.
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Lacerda GMC, Santana JA, de Araujo Filho JA, and Ribeiro SC
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- Animals, Brazil, Checklist, Snakes parasitology, Parasites, Nematoda, Lizards parasitology
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Reptiles, as well as other vertebrate groups, harbour a significant diversity of parasitic organisms, from nematodes and other helminths to viruses and bacteria. The Northeast is one of the richest regions in Brazil in terms of the reptile diversity, number of species and endemism. Parasites are diverse organisms and knowledge about the parasitic fauna of vertebrates is an important factor in understanding the ecological relationships between hosts and the environment. Studies on the parasitic fauna of reptiles in South America have increased in the past few years. The present review is a compilation of 122 studies published from 1924 to 2021. We present information on 101 species of reptiles from five groups (amphisbaenians, crocodile, testudines, snakes and lizards) and 183 parasitic taxa belonging to four phyla: Nematoda; Arthropoda; Platyhelminthes; and Acanthocephala. Nematodes were the most frequently recorded species. Lizards and snakes had more records of parasitism and higher levels of parasite richness and diversity. Ceará was the state with most studies and recorded cases of parasite-host association. The Caatinga and Atlantic Forest were the most investigated environments. The objective of this review was to contribute knowledge on the parasitic biodiversity in reptiles from Northeast Brazil, which may help identify gaps in our knowledge and guide future studies.
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- 2023
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13. Association Between Fear of Pain and Sports-Related Concussion Recovery in a Pediatric Population.
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Arnold JT, Franklin EV, Baker ZG, Abowd M, and Santana JA
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- Child, Fear, Humans, Pain etiology, Retrospective Studies, Athletic Injuries epidemiology, Brain Concussion complications, Brain Concussion diagnosis, Brain Concussion epidemiology, Post-Concussion Syndrome epidemiology
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Objective: To determine whether an association exists between fear of pain and recovery time from sports-related concussion in a pediatric population., Design: Prospective observational study., Setting: Primary outpatient sports medicine clinic of a large pediatric hospital., Patients: One hundred twenty-eight pediatric patients aged 8 to 18 years who presented to clinic with a primary diagnosis of concussion from September 2018 to March 2020. Inclusion criteria included presentation within 2 weeks of injury and symptomatic on initial visit. Patients who sustained a concussion because of motor vehicle collisions or assault were excluded., Independent Variables: There was no intervention. Study participants who met inclusion criteria were administered the Fear of Pain Questionnaire (FOPQ) at their initial visit., Main Outcome Measures: Time to clinical recovery was the main outcome measure and was determined by the fellowship-trained sports medicine physician based on resolution of concussion symptoms, resumption of normal physical and cognitive daily activities, no use of accommodations or medications, and normalization of physical exam., Results: There was a significant difference in FOPQ scores for those with prolonged recovery (M = 33.12, SD = 18.36) compared with those recovering in fewer than 28 days (M = 26.16, SD = 18.44; t [126] = -2.18, P = 0.036)., Conclusions: Consistent with the adult literature, we found that pediatric patients are more likely to have a prolonged recovery from concussion when they have higher fear of pain., Competing Interests: The authors report no conflicts of interest., (Copyright © 2021 Wolters Kluwer Health, Inc. All rights reserved.)
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- 2022
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14. Occurrence and characterization of methicillin-resistant Staphylococcus spp. in diseased dogs in Brazil.
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Viegas FM, Santana JA, Silva BA, Xavier RGC, Bonisson CT, Câmara JLS, Rennó MC, Cunha JLR, Figueiredo HCP, Lobato FCF, and Silva ROS
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- Animals, Anti-Bacterial Agents pharmacology, Brazil epidemiology, Dogs, Humans, Methicillin Resistance genetics, Microbial Sensitivity Tests, RNA, Ribosomal, 16S genetics, Staphylococcus, Surgical Wound Infection, Anti-Infective Agents, Dog Diseases epidemiology, Dog Diseases microbiology, Methicillin-Resistant Staphylococcus aureus, Staphylococcal Infections drug therapy, Staphylococcal Infections epidemiology, Staphylococcal Infections veterinary
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Staphylococcus pseudintermedius is a major commensal bacterium of the skin and mucosae of dogs and an opportunistic agent responsible for several clinical infections, such as pyoderma, otitis, and surgical wound infections. The emergence of methicillin-resistant S. pseudintermedius (MRSP) has become a problem of great concern in veterinary and human medicine because it is multidrug resistant (MDR) and can also infect humans. This study aimed to identify the occurrence of Staphylococcus spp. in infected patients and investigate the antimicrobial resistance profiles and molecular structure of MRSP isolates. Samples were obtained from two different veterinary clinics; suggestive colonies were submitted to matrix-assisted laser desorption ionization-time of flight (MALDI-ToF) mass spectrometry and confirmed at the species level by polymerase chain reaction (PCR). Sequencing of the 16S rRNA and rpoB genes were used in selected samples that were not identified by MALDI-ToF and by the species-specific PCR. Antimicrobial susceptibility and PCR detection of mecA were performed. MRSP isolates were subjected to multilocus sequence typing. Of all the clinical staphylococci (n = 131), 98 (74.8%) were identified as S. pseudintermedius. Multidrug resistance (resistance to ≥3 classes of antimicrobials) was observed in 63.2% of S. pseudintermedius isolates, and 24.5% of S. pseudintermedius isolates were methicillin-resistant. Half of the MRSP isolates were isolated from surgical site infections. Among the ten sequence types (ST) identified, nine were novel. ST71 was the most prevalent and associated with resistance to fluoroquinolones. Prior antimicrobial therapy, hospitalization, and surgical site infections seemed to be risk factors for MRSP acquisition. The present study showed a high rate of MDR staphylococci in infected dogs. MRSP was isolated from different clinical conditions, mainly surgical site infections. Additionally, this is the first study to extensively investigate the population structure of MRSP in Brazil, which revealed the dispersion of CC71 and nine novel ST. These findings raise concerns for both animal and human health due to the zoonotic potential of this species and limited therapeutic options available for MRSP infections., Competing Interests: The authors have declared that no competing interests exist.
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- 2022
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15. Fecal Shedding of Multidrug Resistant Escherichia coli Isolates in Dogs Fed with Raw Meat-Based Diets in Brazil.
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Ramos CP, Kamei CYI, Viegas FM, de Melo Barbieri J, Cunha JLR, Hounmanou YMG, Coura FM, Santana JA, Lobato FCF, Bojesen AM, and Silva ROS
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The practice of feeding dogs raw meat-based diets (RMBDs) is growing in several countries, and the risks associated with the ingestion of pathogenic and antimicrobial-resistant Escherichia coli in dogs fed these diets are largely unknown. We characterized E. coli strains isolated from dogs fed either an RMBD or a conventional dry feed, according to the phylogroup, virulence genes, and antimicrobial susceptibility profiles of the bacteria. Two hundred and sixteen E. coli strains were isolated. Dogs fed RMBDs shed E. coli strains from the phylogroup E more frequently and were positive for the E. coli heat-stable enterotoxin 1-encoding gene. Isolates from RMBD-fed dogs were also frequently positive for multidrug-resistant E. coli isolates including extended-spectrum beta-lactamase (ESBL) producers. Whole-genome sequencing of seven ESBL-producing E. coli strains revealed that they predominantly harbored blaCTX-M-55 , and two strains were also positive for the colistin-resistant gene mcr-1 . These results suggest that feeding an RMBD can affect the dog's microbiota, change the frequency of certain phylogroups, and increase the shedding of diarrheagenic E. coli . Also, feeding an RMBD seemed to be linked with the fecal shedding of multidrug-resistant E. coli , including the spread of strains harboring mobilizable colistin resistance and ESBL genes. This finding is of concern for both animal and human health.
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- 2022
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16. Clostridioides difficile and multi-drug-resistant staphylococci in free-living rodents and marsupials in parks of Belo Horizonte, Brazil.
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Santana JA, Colombo SA, Silva BA, Diniz AN, de Almeida LR, Oliveira Junior CA, Lobato FCF, de Souza Trindade G, Paglia AP, and Silva ROS
- Subjects
- Animals, Anti-Bacterial Agents pharmacology, Brazil epidemiology, Clostridioides, Microbial Sensitivity Tests, Rodentia, Staphylococcus genetics, Clostridioides difficile genetics, Marsupialia, Methicillin-Resistant Staphylococcus aureus genetics, Pharmaceutical Preparations
- Abstract
The global emergence of antimicrobial resistance (AMR) has become a serious threat to human and animal health. Recent studies have shown that synanthropic animals can act as reservoirs and disseminators of pathogens and resistant bacteria. The aim of this study was to evaluate the frequency, distribution, and antimicrobial susceptibility of staphylococcal species and Clostridioides difficile isolated from the feces of free-living rodents and marsupials from two urban parks in Belo Horizonte, Brazil. During a 12-month period, fecal samples from 159 free-living animals, including 136 rodents and 23 marsupials, were collected from two urban parks in Belo Horizonte, Minas Gerais, Brazil. Staphylococcus spp. were more likely to be isolated from rodents than marsupials (p = 0.0164). Eight different staphylococcal species were isolated from 36 (26.5%) rodents and one marsupial (4.3%). S. saprophyticus (48.6%) was the most frequently isolated species, and almost a quarter of the isolates (24.3%) were resistant to at least one antimicrobial agent, four (10.8%) of which were multi-drug resistant (MDR). Two (5.4%) strains were resistant to cefoxitin and were then classified as methicillin-resistant staphylococci, and one also tested positive for the mecA gene. C. difficile was isolated from two rodents (1.5%), and one strain was toxigenic and classified as ribotype 064. One isolate was resistant to rifampicin, but both strains were susceptible to all other antimicrobials tested, including metronidazole and vancomycin. All C. difficile isolates and all staphylococcal strains resistant to antimicrobials were recovered from the same park. The present study suggests that free-living rodents in Belo Horizonte (Brazil) are mainly colonized by S. saprophyticus and may act as reservoirs of antimicrobial-resistant Staphylococcus spp. and C. difficile strains. This is the first study to evaluate the presence of staphylococci and C. difficile from free-living opossums and suggest a low fecal shedding of these organisms by these mammals., (© 2021. Sociedade Brasileira de Microbiologia.)
- Published
- 2022
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17. Atomic Structures of Single-Layer Nanoislands of Ni, Cu, Rh, Pd, Ag, Ir, Pt, Au Supported on Au(111) from Density Functional Theory Calculations.
- Author
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Fernández-Félix TC and Santana JA
- Abstract
We have used density functional theory calculations to study the atomic structure of single-layer nanoislands of metal M (M=Ni, Cu, Rh, Pd, Ag, Ir, Pt, Au) supported on M(111) and Au(111) surfaces. Nanoislands of Cu, Pd, Ag, Pt, and Au have planar structures on Au(111), while nanoislands of Ni, Rh, and Ir are nonplanar. The calculations also show that nanoislands of Cu, Pd, Pt, and Au on Au(111) with a diameter below 3 nm can have one of several atomic structures. Two of these structures have atoms at the edges of the nanoislands located near bridge sites on Au(111), and the other structures have atoms at the edges and center of the nanoislands located near bridge sites. The relative stability of these atomic structures depends on the size and nature of the Au-supported nanoparticles. Our findings provided computational support for the work of Liao and Ya [J. Phys. Chem. C. 121 (2017) 19218-19225] reporting the formation of two phases of Pt nanoislands on Au(111). These findings also reveal the rich and complex atomic structures of small single-layer metal nanoislands supported on metal surfaces., Competing Interests: Declaration of interests The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
- Published
- 2022
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18. Simulation of Metal-Supported Metal-Nanoislands: A Comparison of DFT Methods.
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Vázquez-Lizardi GA, Ruiz-Casanova LA, Cruz-Sánchez RM, and Santana JA
- Abstract
We have evaluated various density functional theory (DFT) methods to simulate geometric, energetic, electronic, and hydrogen adsorption properties of metal-nanoparticles supported on metal surfaces. We used Pt and Pd nanoislands on Au(111) as model systems. The evaluated DFT methods include GGA (PW91, PBE, RPBE, revPBE, and PBESol), GGA with van der Waals (vdW) corrected (PBE-D3), GGA with optimized vdW functionals (revPBE-vdW), meta-GGA (SCAN and MS2), and the machine learning-based method BEEF-vdW. The results show that the various DFT methods yield similar geometric and electronic properties for Pt (or Pd) nanoislands on Au(111). The DFT methods also produce similar relative energetics for small Pt (or Pd) clusters with different conformations on Au(111). The results show that a triatomic cluster of Pt on Au(111) is more stable with a linear conformation. In contrast, a triatomic cluster of Pd is more stable with a triangular conformation. For clusters with four or more atoms, Pt and Pd clusters on Au(111) prefer non-linear conformation. We found that the various DFT methods yield different results only for the adsorption energy of hydrogen., Competing Interests: Competing Interest None
- Published
- 2021
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19. Effects of vaccination against brucellosis and clostridia on the intake, performance, feeding behavior, blood parameters, and immune responses of dairy heifers calves.
- Author
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Diniz Neto HC, Lombardi MC, Campos MM, Lage AP, Silva ROS, Dorneles EMS, Lage CFA, Carvalho WA, Machado FS, Pereira LGR, Tomich TR, Ramos CP, Assis RA, Lobato FCF, Santana JA, Santos ELS, Andrade RS, and Coelho SG
- Subjects
- Animal Feed analysis, Animals, Body Weight, Cattle, Feeding Behavior, Female, Immunity, Vaccination veterinary, Brucellosis veterinary, Cattle Diseases prevention & control
- Abstract
The aim of this study was to identify possible effects of different vaccination strategies (concomitantly or not) against brucellosis and clostridia on intake, performance, feeding behavior, blood parameters, and immune responses of dairy heifers calves. Fifty heifers calves were enrolled [38 Gyr (Zebu, Bos taurus indicus) and 12 5/8 Holstein × Gyr]. At 120 d of age, animals were randomly distributed among 3 groups: B (n = 18), vaccinated against brucellosis; C (n = 14), vaccinated against clostridia and CB (n = 18), vaccinated concomitantly for both. Rectal and thermographic temperatures were evaluated on days -1, 0, 1, 2, 3, 5, 7,10, 14, and 28 relatives to the vaccination day. Feed and water intake, body weight (BW), and feeding behavior were monitored daily by an electronic feeding system. Blood was sampled on days 0, 3, 7, 14, and 28, relative to the vaccination day for determination of glucose and β -hydroxybutyrate (BHBA) concentrations. Blood sampled on day 0 (prevaccination) and on days 28 and 42 were used to evaluate the immune response against Brucella abortus and clostridia. There was an increase in rectal temperature between the first and the third day postvaccination in the 3 groups. The thermography revealed an increase of local temperature for 7 d on groups B and CB. Group C had increased local temperature for a longer period, lasting for up to 14 d. Dry mater intake was reduced for groups B and CB, but no alteration was observed for group C. No alterations regarding initial BW, final BW, average daily weight gain, and feed efficiency were observed. No differences were observed for the 3 vaccination groups for blood parameters throughout the evaluation period. The concomitant vaccination against brucellosis and clostridia led to lower neutralizing antibody titers against epsilon toxin of Clostridium perfringens and botulinum toxin type C of C. botulinum (C > CB > B). When cellular proliferation assay and serological tests to B. abortus were evaluated, no differences were observed between groups B and CB. The present results indicate that the concomitant vaccination against brucellosis and clostridia has no relevant impact on the intake, performance, and feeding behavior of dairy calves. However, the concomitant vaccination of vaccines against these 2 pathogens impacts animal immunity against clostridial infections., (© The Author(s) 2021. Published by Oxford University Press on behalf of the American Society of Animal Science. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2021
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20. Hydrogen Adsorption on Au-Supported Pt and Pd Nanoislands: A Computational Study of Hydrogen Coverage Effects.
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Santana JA and Meléndez-Rivera J
- Abstract
We have studied the dissociative adsorption of hydrogen under high coverage conditions of adsorbed hydrogen on Pd and Pt nanoislands supported on Au(111) using Density Functional Theory calculations. The results reveal that for Pd/Au(111), the free energy of hydrogen adsorption Δ G is close to 0 kJ/mol when the coverage of adsorbed hydrogen is near 1 ML, where the available catalytic sites are located at the edges of the Pd nanoislands. In the case of Pt/Au(111), Δ G ≈ 0 kJ/mol under a broad range of hydrogen coverage conditions, from 1 ML to 3 ML, depending on the size of the Pt nanoislands. This is the case because the available catalytic sites are located at both the steps and terraces of Pt nanoislands. These findings indicate that Au surfaces with Pd or Pt nanoislands offer catalytic sites with Δ G ≈ 0 for hydrogen reactions, one key factor for an ideal electrocatalyst for hydrogen reactions., Competing Interests: The authors declare no competing financial interest.
- Published
- 2021
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21. The Efficacy, Effectiveness and Safety of 5% Transdermal Lidocaine Patch for Chronic Low Back Pain: A Narrative Review.
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Santana JA, Klass S, and Felix ER
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- Anesthetics, Local administration & dosage, Anesthetics, Local therapeutic use, Humans, Lidocaine administration & dosage, Randomized Controlled Trials as Topic, Transdermal Patch, Chronic Pain drug therapy, Lidocaine therapeutic use, Low Back Pain drug therapy
- Abstract
Local anesthetics, such as the 5% transdermal lidocaine patch (5LP), have been frequently used in the treatment of musculoskeletal pain, especially chronic low back pain (CLBP). This review compiles the literature available on the efficacy, effectiveness, and safety of 5LP when used for the management of CLBP. A systematic search method revealed seven articles that fit the inclusion criteria. For each study, efficacy, effectiveness, and adverse events data were extracted. We found no randomized controlled trials with substantial evidence to support the use of 5LP in CLBP, despite the presence of nonrandomized noncontrolled trials suggesting its effectiveness for relief of pain. Future randomized controlled trials with clinically useful outcomes are needed to assess the efficacy, effectiveness, and safety of 5LP for CLBP more appropriately., (© 2020 American Academy of Physical Medicine and Rehabilitation.)
- Published
- 2020
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22. DFT Calculations of the Adsorption States of O 2 on OH/H 2 O-Covered Pt(111).
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Santana JA
- Abstract
The adsorption of O
2 on Pt(111) was studied with Density Functional Theory calculations. Various adsorbed states of O2 were evaluated on clean and OH/H2 O-covered Pt(111) surfaces at the solid/gas and solid/liquid interfaces. The results reveal that the adsorption of O2 on OH/H2 O-covered Pt(111) surface starts with the physical adsorption of O2 . Two other adsorption states are reachable from the physisorbed state, the end-on, and bridging chemisorbed O2 . Analysis of the energetics of these adsorption states shows that O2 physically adsorbed at the OH/H2 O-covered Pt( 111) surface is a high energy state that requires activation to transition to the end-on chemisorbed O2 state. On the other hand, the end-on chemisorbed state can transition to the bridging chemisorbed state with only a small activation energy when a nearby Pt adsorption site is available. Frequency analysis of the physisorbed, end-on, and bridging adsorption states shows that adsorbed O2 stretching frequencies are close to 1400, 1300, and 900 cm-1 , respectively.- Published
- 2020
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23. Strain and Low-Coordination Effects on Monolayer Nanoislands of Pd and Pt on Au(111): A Comparative Analysis Based on Density Functional Results.
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Santana JA, Cruz B, Melendez-Rivera J, and Rösch N
- Abstract
Recent experiments demonstrated that the catalytic centers for the hydrogen evolution reaction (HER) are different on Pd and Pt nanoislands on Au(111). Inspired by these experiments, we examined the geometric, energetic, electronic and hydrogen adsorption properties of monolayer model nanoislands of Pd and Pt supported on Au(111) with density functional theory calculations. Accordingly, Au-tensile strain effects can be nearly 50% larger on the geometric structure of nanoislands of Pd on Au(111) than their Pt analogs, resulting on different electronic properties for these nanoislands. Despite these differences between Pd and Pt nanoisland on Au(111), our computational modelling of the hydrogen adsorption suggests that the unique catalytic centers for the HER on Pd and Pt nanoislands supported on Au(111) derive from the existence of low-coordinated adsorption sites and the intrinsic properties of Pd and Pt, but not from Au-tensile strain effects., Competing Interests: The authors declare no competing financial interest.
- Published
- 2020
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24. Improving Concussion Management by Including Driving Recommendations for Adolescents with Concussions: A Quality Improvement Project.
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Santana JA, Martinie R, and Gomez J
- Abstract
Introduction: Motor vehicle collisions are the leading cause of death in adolescents. A concussion is a common injury sustained by adolescents and may impair their driving abilities during the acute phase of recovery. Healthcare providers do not consistently perform counseling of adolescents regarding driving after a concussion. This quality improvement project's goal was to increase the incidence of primary care sports medicine physicians providing driving recommendations to 75% of adolescents who suffered from concussions., Methods: Between August 2017 to August 2018, a "smart phrase" implemented in the electronic health record system reminded providers during office visits to provide driving recommendations to patients 15 years old and older who presented to the sports medicine clinic for evaluation of concussion. Performing monthly retrospective chart reviews determined the frequency of patients who received driving recommendations during the initial visit., Results: We achieved the goal of providing driving recommendations to 75% of concussed patients by the second month. This progress was maintained through the remainder of the year, except for 1 month (December). Forty-three percent of patients with concussions evaluated met inclusion criteria, and of those, 48% were actively driving before their concussion. The most common medical reason for restricting driving was vestibular or ocular dysfunction., Conclusion: This quality improvement project showed that providing driving instructions to concussion patients by implementing a smart phrase into the electronic health record system was impactful and sustainable., (Copyright © 2020 the Author(s). Published by Wolters Kluwer Health, Inc.)
- Published
- 2020
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25. Linear correlation models for the redox potential of organic molecules in aqueous solutions.
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Ortiz-Rodríguez JC, Santana JA, and Méndez-Hernández DD
- Abstract
In this study, we use the molecular orbital energy approximation (MOEA) and the energy difference approximation (EDA) to build linear correlation models for the redox potentials of 53 organic compounds in aqueous solutions. The molecules evaluated include nitroxides, phenols, and amines. Both the MOEA and EDA methods yield similar correlation models, however, the MOEA method is less computationally expensive. Correlation coefficients (R
2 ) below 0.3 and mean absolute errors above 0.25 V were found for correlation models built without solvent effects. When explicit water molecules and a continuum solvent model are added to the calculations, correlation coefficients close to 0.8 are reached, and mean absolute errors below 0.18 V are obtained. The incorporation of solvent effects is necessary for good correlation models, particularly for redox processes of charged molecules in aqueous solutions. A comparison of the correlation models from different methodologies is provided. Graphical abstract.- Published
- 2020
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26. Electron Confinement and Magnetism of (LaTiO 3 ) 1 /(SrTiO 3 ) 5 Heterostructure: A Diffusion Quantum Monte Carlo Study.
- Author
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Santana JA, Krogel JT, Okamoto S, and Reboredo FA
- Abstract
We have applied the diffusion quantum Monte Carlo (DMC) method to study the electron confinement and magnetic structure in the (LaTiO
3 )1 /(SrTiO3 )5 heterostructure. The DMC results were compared with various density functional theory (DFT) methods, including local density approximation (LDA), generalized gradient approximation (GGA), LDA+ U , and GGA+ U , as well as the recently proposed strongly constrained appropriately normed (SCAN) and van der Waals-Bayesian error estimation functional (vdW-BEEF). We found that many-body correlations are crucial to accurately describe the localization of the two-dimensional (2D) electron gas around the lanthanum planes. DMC predicts 20% more electron density within the first interfacial titanium layer in (LaTiO3 )1 /(SrTiO3 )5 than LDA+ U , suggesting that the degree of confinement of the 2D electron gas in the interfacial region is underestimated with semilocal DFT approximations. DMC yields the ferromagnetic (FM) state as the ground state of (LaTiO3 )1 /(SrTiO3 )5 and the antiferromagnetic (AFM) and nonmagnetic (NM) states that are higher in energy by 37(15) and 238(15) meV per lanthanum atom at the interface, respectively. Most DFT methods yield the FM and NM states within less than 25 meV in energy and could not find the AFM state.- Published
- 2020
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27. Identification and Characterization of Escherichia coli , Salmonella Spp., Clostridium perfringens , and C. difficile Isolates from Reptiles in Brazil.
- Author
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Ramos CP, Santana JA, Morcatti Coura F, Xavier RGC, Leal CAG, Oliveira Junior CA, Heinemann MB, Lage AP, Lobato FCF, and Silva ROS
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- Animals, Brazil, Clostridioides difficile classification, Clostridium perfringens classification, Ecosystem, Escherichia coli classification, Phylogeny, Salmonella classification, Serotyping, Clostridioides difficile isolation & purification, Clostridium perfringens isolation & purification, Escherichia coli isolation & purification, Reptiles microbiology, Salmonella isolation & purification
- Abstract
Considering the increasing popularity of reptiles as pets and their possible role as reservoirs of pathogenic microorganisms, the aim of this study was to isolate Escherichia coli, Salmonella spp ., Clostridium perfringens , and C. difficile strains from reptiles in Brazil and to characterize the isolated strains. The characterization was based on phylogenetic typing of E. coli , identification of virulence genes of E. coli, C. perfringens, and C. difficile , serotyping of Salmonella spp., ribotyping and MLST of C. difficile and antimicrobial susceptibility test of pathogenic strains. Cloacal swabs were collected from 76 reptiles, of which 15 were lizards, 16 chelonians, and 45 snakes, either living in captivity, in the wild, or as companion animals. E. coli was isolated from 52 (68.4%) reptiles, of which 46 (88.4%) were characterized as phylogroup B1. The virulence factor CNF1 of E. coli was found in seven (9.2%) sampled animals, whereas the gene of EAST1 was found in isolates from two (2.6%) reptiles. Three isolates positive for CNF1 were resistant to cephalothin, one of which was also resistant to ciprofloxacin, trimethoprim/sulfamethoxazole, and chloramphenicol, being then classified as multidrug resistant strain (MDR). Salmonella enterica was identified in 26 (34.2%) reptiles, of which 13 belonged to the subspecies enterica. Serotypes such as S. Mbandaka, S. Panama, S . Infantis, S. Heidelberg, and S. Anatum were identified. One isolate of S. enterica subsp. houtenae was resistant to cephalothin and ciprofloxacin. C. perfringens type A was isolated from six (7.8%) animals. C. difficile was isolated from three (3.9%) reptiles. Two of these isolates were toxigenic and classified into ribotypes/MLST 081/ST9 and 106/ST42, which have been previously reported to infect humans. In conclusion, reptiles in Brazil can harbor toxigenic C. difficile and potentially pathogenic E. coli and Salmonella enterica subsp. enterica , thus representing a risk to human and animal health.
- Published
- 2019
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28. Technical aspects for counting and timing photons with a digital oscilloscope.
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Rojas-Santana JA and Lopez-Mago D
- Abstract
Photon counting and timing are generic tasks in many photonics laboratories. However, the cost of a commercial photon counter system can be a limiting factor to establish a new laboratory. Homemade photon counters can present a cost-saving solution, but they can also present a demanding side project not always part of the main research. Modern digital oscilloscopes are available in most universities and can provide a simple solution to measure photon statistics. Here, we describe the technicalities and limitations for counting and timing photons using a digital oscilloscope.
- Published
- 2019
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29. Importancia de la información que reciben los pacientes de todo acto médico-quirúrgico que se les proponga
- Author
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Romero-Santana Ja
- Subjects
Medicine(all) ,Informed Consent ,Philosophy ,Communication Barriers ,General Medicine ,Disclosure ,Therapeutics ,Informática médica ,Acto médico-quirúrgico ,Cartas al Director ,Surgical Procedures, Operative ,Humans ,Consentimiento informado ,Family Practice ,Humanities - Published
- 2006
30. Staphylococcus spp. as part of the microbiota and as opportunistic pathogen in free-ranging black-tuffed marmosets (Callithrix penicillata) from urban areas: Epidemiology, antimicrobial resistance, and pathology.
- Author
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Dos Santos DO, de Campos BH, de Souza TGV, de Castro YG, Alves Neto G, Vieira AD, Ribeiro LN, de Figueiredo CCC, Duarte JR, Amaral VHB, Dos Souza LR, de Paula NF, Coelho CM, Tinoco HP, Oliveira AR, de Carvalho MPN, Silva ROS, and Santos RL
- Subjects
- Animals, Female, Drug Resistance, Bacterial, Male, Microbiota drug effects, Cities, Brazil epidemiology, Feces microbiology, Callithrix microbiology, Staphylococcus drug effects, Staphylococcus isolation & purification, Monkey Diseases microbiology, Monkey Diseases epidemiology, Staphylococcal Infections veterinary, Staphylococcal Infections microbiology, Staphylococcal Infections epidemiology, Anti-Bacterial Agents pharmacology
- Abstract
Background: Marmosets (Callithrix sp.), including black-tuffed marmosets (C. penicillata), are neotropical primates that can be highly adapted to urban environments, especially parks and forested areas near cities. Staphylococcus spp. are part of the microbiota of many different hosts and lead to opportunistic severe infection. Isolates from wild animals can be resistant to antimicrobial drugs. However, there are a few studies that evaluated Staphylococcus spp. in neotropical primates. The goal of this study was to evaluate Staphylococcus spp. isolated from free-ranging black-tuffed marmosets., Methods: Marmosets were captured in six urban parks. After sedation, skin and rectal swabs and feces were sampled. Staphylococcus spp. isolates were identified by MALDI-ToF and their antimicrobial susceptibility was determined., Results: Over 30% of captured individuals were positive for Staphylococcus spp., and S. aureus was the most isolated species followed by Mammaliicoccus (Staphylococcus) sciuri. With the exception of the marmoset subjected to necropsy, none of the other had lesions, which supports that notion that Staphylococcus spp. are members of the microbiota, but also opportunistic pathogens. Most isolates were susceptible to all antimicrobials tested; however, one isolate of S. epidermidis was resistant to multiple antimicrobials (penicillin, cefoxitin, ciprofloxacin, clindamycin, and erythromycin). We considered S. aureus as the main staphylococci to colonize black-tuffed marmosets., Conclusions: Black-tuffed marmosets can be colonized by several Staphylococcus species, most frequently by S. aureus, and the majority of isolates were sensible to the antimicrobials tested. One S. epidermidis isolate was considered multidrug resistant., (© 2024 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.)
- Published
- 2024
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31. Adsorption and diffusion of sulfur on the (111), (100), (110), and (211) surfaces of FCC metals: Density functional theory calculations.
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Bernard Rodríguez CR and Santana JA
- Abstract
We have studied the adsorption and diffusion of sulfur at the low-coverage regime of 0.25 ML on the (111), (100), (110), and (211) surfaces of Ni, Cu, Rh, Pd, Ag, Ir, Pt, and Au using density functional theory calculations. Sulfur adsorbed preferentially on three-fold or four-fold high-coordination sites over most of the studied surfaces. On the Ir(110), Pt(110), and Au(110) surfaces, sulfur is more stable on the two-fold sites. Calculations of the minimum energy diffusion pathway show that the energy barrier for the surface diffusion of sulfur depends on the orientation and nature of the metal surfaces. On the (100), sulfur shows the highest diffusion energy, ranging from 0.47 eV in Au(100) to 1.22 eV in Pd(100). In the (110) surface, the diffusion of sulfur is along the channel for Ni, Cu, Rh, Pd, and Ag, and across the channel for Ir, Pt, and Au. In the case of the (211) surfaces, the diffusion is preferentially along the terrace or step-edge sites. Our work provides data for the adsorption of sulfur on many surfaces not previously reported. The present work is a reference point for future computational studies of sulfur and sulfur-containing molecules absorbed on face center cubic metal surfaces.
- Published
- 2018
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32. RELATIVISTIC MR-MP ENERGY LEVELS FOR L-SHELL IONS OF SULFUR AND ARGON.
- Author
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Santana JA, Lopez-Dauphin NA, Morales Butler EJ, and Beiersdorfer P
- Abstract
Calculated level energies for valence and K-vacancy states are provided for the ion series S VII - S XIV and Ar IX - Ar XVI. The calculations were performed with the relativistic Multi-Reference Mxller-Plesset Perturbation Theory method (MR-MP). The data set includes all the level energies with configurations 1 s
2 2( s, p )q , 1 s2 2( s, p )q- 1 nl , 1 s1 2( s, p )q +1 , 1 s1 2( s, p )q nl , 2( s, p )q +2 and 2( s, p )q +1 nl , where 1 ≤ q ≤ 8, n ≤ 5 and l ≤ 3. We have compared our results with data from the National Institute of Standards and Technology (NIST) on-line database and with previous calculations. The average deviation of valence level energies ranges from 0.16 eV in Ne-like ions to 0.01 eV in Li-like ions, showing that the present MR-MP valence level energies are highly accurate. In the case of K-vacancy states, the deviation is generally below 0.3 eV for Li-like S XIV and Ar XVI. The deviation for K-vacancy energies in other L-shell ions (Be-, B-, C-, N- and O-like Ar ions) is higher but likely because the NIST-recommended values have a higher uncertainty. The data set includes many n = 4 and n = 5 valence and K-vacancy levels in L-shell ions of S and Ar not previously reported. The data can be used for line identification and modeling of L-shell ions of S and Ar in astrophysical and laboratory-generated plasmas, and as energy references in the absence of more accurate laboratory measurements.- Published
- 2018
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33. Diffusion quantum Monte Carlo and density functional calculations of the structural stability of bilayer arsenene.
- Author
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Kadioglu Y, Santana JA, Özaydin HD, Ersan F, Aktürk OÜ, Aktürk E, and Reboredo FA
- Abstract
We have studied the structural stability of monolayer and bilayer arsenene (As) in the buckled (b) and washboard (w) phases with diffusion quantum Monte Carlo (DMC) and density functional theory (DFT) calculations. DMC yields cohesive energies of 2.826(2) eV/atom for monolayer b-As and 2.792(3) eV/atom for w-As. In the case of bilayer As, DMC and DFT predict that AA-stacking is the more stable form of b-As, while AB is the most stable form of w-As. The DMC layer-layer binding energies for b-As-AA and w-As-AB are 30(1) and 53(1) meV/atom, respectively. The interlayer separations were estimated with DMC at 3.521(1) Å for b-As-AA and 3.145(1) Å for w-As-AB. A comparison of DMC and DFT results shows that the van der Waals density functional method yields energetic properties of arsenene close to DMC, while the DFT + D3 method closely reproduced the geometric properties from DMC. The electronic properties of monolayer and bilayer arsenene were explored with various DFT methods. The bandgap values vary significantly with the DFT method, but the results are generally qualitatively consistent. We expect the present work to be useful for future experiments attempting to prepare multilayer arsenene and for further development of DFT methods for weakly bonded systems.
- Published
- 2018
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34. Quantum Many-Body Effects in Defective Transition-Metal-Oxide Superlattices.
- Author
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Santana JA, Mishra R, Krogel JT, Borisevich AY, Kent PRC, Pantelides ST, and Reboredo FA
- Abstract
Strong electronic correlations, interfaces, and defects, and disorder each individually challenge the theoretical methods for predictions of materials properties. These challenges are all simultaneously present in complex transition-metal-oxide interfaces and superlattices, which are known to exhibit unique and unusual properties caused by multiple coupled degrees of freedom and strong electronic correlations. Here we show that ab initio quantum Monte Carlo (QMC) solutions of the many-electron problem are now possible for the full complexity of these systems. Within a single nonempirical theoretical approach, we unambiguously establish the site-specific stability of oxygen vacancies in the (LaFeO
3 )2 /(SrFeO3 ) superlattice, accounting for experimental data, and predict their migration pathways. QMC calculations are now capable of playing a major role in the elucidation of many-body phenomena in complex oxides previously out of reach of first-principles theories.- Published
- 2017
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35. Diffusion quantum Monte Carlo calculations of SrFeO 3 and LaFeO 3 .
- Author
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Santana JA, Krogel JT, Kent PRC, and Reboredo FA
- Abstract
The equations of state, formation energy, and migration energy barrier of the oxygen vacancy in SrFeO
3 and LaFeO3 were calculated with the diffusion quantum Monte Carlo (DMC) method. Calculations were also performed with various Density Functional Theory (DFT) approximations for comparison. DMC reproduces the measured cohesive energies of these materials with errors below 0.23(5) eV and the structural properties within 1% of the experimental values. The DMC formation energies of the oxygen vacancy in SrFeO3 and LaFeO3 under oxygen-rich conditions are 1.3(1) and 6.24(7) eV, respectively. Similar calculations with semi-local DFT approximations for LaFeO3 yielded vacancy formation energies 1.5 eV lower. Comparison of charge density evaluated with DMC and DFT approximations shows that DFT tends to overdelocalize the electrons in defected SrFeO3 and LaFeO3 . Calculations with DMC and local density approximation yield similar vacancy migration energy barriers, indicating that steric/electrostatic effects mainly determine migration barriers in these materials.- Published
- 2017
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36. Antimicrobial susceptibility and phylotyping profile of pathogenic Escherichia coli and Salmonella enterica isolates from calves and pigs in Minas Gerais, Brazil.
- Author
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Souto MS, Coura FM, Dorneles EM, Stynen AP, Alves TM, Santana JA, Pauletti RB, Guedes RM, Viott AM, Heinemann MB, and Lage AP
- Subjects
- Animals, Brazil, Cattle microbiology, Escherichia coli drug effects, Feces, Microbial Sensitivity Tests, Phylogeny, Salmonella enterica drug effects, Sus scrofa microbiology, Anti-Bacterial Agents pharmacology, Drug Resistance, Multiple, Bacterial, Escherichia coli isolation & purification, Salmonella enterica isolation & purification
- Abstract
The aims of the present study were to determine (i) the profiles of phylogroup and (ii) the antimicrobial susceptibility of pathogenic Escherichia coli strains isolated from calves, and of Salmonella spp. strains isolated from calves and pigs in Minas Gerais State, Brazil. Sixty-one pathogenic E. coli strains and Salmonella spp. (n = 24) strains isolated from fecal samples of calves and Salmonella spp. (n = 39) strains previously isolated from fecal samples of growing/finishing pigs were tested. The minimum inhibitory concentration (MIC) using the agar dilution method was determined for nalidixic acid, amikacin, amoxicillin, ampicillin, cefoxitin, norfloxacin, gentamicin, tetracycline, and trimethoprim-sulfamethoxazole. All E. coli isolates were susceptible to amikacin. Tetracycline was the antimicrobial that presented the higher frequency of resistance among E. coli strains, followed by ampicillin, trimethoprim-sulfamethoxazole, amoxicillin, nalidixic acid, norfloxacin, gentamicin, and cefoxitin. E. coli (n = 61) strains isolated from calves belonged to different phylogroup namely, phylogroup A (n = 26), phylogroup B1 (n = 31), phylogroup E (n = 3), and phylogroup F (n = 1). Phylogroups B2, C, and D were not identified among the E. coli in the present study. All Salmonella spp. (n = 24) strains isolated from fecal samples of calves were susceptible to amikacin, amoxicillin, ampicillin, norfloxacin, gentamicin, tetracycline, and trimethoprim-sulfamethoxazole. Resistance to nalidixic acid and cefoxitin was detected in 16.66 and 8.33 % of the Salmonella spp. strains, respectively. Among the Salmonella spp. (n = 39) strains isolated from fecal samples of pigs, the higher frequency of resistance was observed to tetracycline, followed by amoxicillin, gentamicin, ampicillin, trimethoprim-sulfamethoxazole, nalidixic acid, cefoxitin, and norfloxacin. All strains were susceptible to amikacin. Forty-eight (78.68 %) of the E. coli strains were classified as multidrug-resistant, whereas among Salmonella spp. strains, the percentage of multidrug resistance was 57.14 %, being all multidrug-resistant strains isolated from pigs (92.30 %). The results from the present study indicate a high frequency of antimicrobial resistance among pathogenic E. coli strains isolated from calves and Salmonella spp. strains isolated from pigs and a high rate of susceptibility to most antimicrobials tested among Salmonella spp. strains isolated from calves. Our study highlights the presence of multidrug-resistant strains of E. coli and Salmonella spp. isolated from food-producing animals in Minas Gerais, Brazil.
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- 2017
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37. [Ultrasound findings in rhabdomyolysis].
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Carrillo-Esper R, Galván-Talamantes Y, Meza-Ayala CM, Cruz-Santana JA, and Bonilla-Reséndiz LI
- Subjects
- Acute Kidney Injury etiology, Adult, Compartment Syndromes diagnosis, Diagnosis, Differential, Humans, Immobilization adverse effects, Ischemia etiology, Leg blood supply, Male, Mountaineering injuries, Muscle Fibers, Skeletal pathology, Rhabdomyolysis etiology, Rhabdomyolysis pathology, Thigh, Rhabdomyolysis diagnostic imaging, Ultrasonography methods
- Abstract
Background: Rhabdomyolysis is defined as skeletal muscle necrosis. Ultrasound assessment has recently become a useful tool for the diagnosis and monitoring of muscle diseases, including rhabdomyolysis. A case is presented on the ultrasound findings in a patient with rhabdomyolysis., Objective: To highlight the importance of ultrasound as an essential part in the diagnosis in rhabdomyolysis, to describe the ultrasound findings, and review the literature., Clinical Case: A 30 year-old with post-traumatic rhabdomyolysis of both thighs. Ultrasound was performed using a Philips Sparq model with a high-frequency linear transducer (5-10MHz), in low-dimensional scanning mode (2D), in longitudinal and transverse sections at the level of both thighs. The images obtained showed disorganisation of the orientation of the muscle fibres, ground glass image, thickening of the muscular fascia, and the presence of anechoic areas., Conclusions: Ultrasound is a useful tool in the evaluation of rhabdomyolysis., (Copyright © 2015 Academia Mexicana de Cirugía A.C. Publicado por Masson Doyma México S.A. All rights reserved.)
- Published
- 2016
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38. Cohesive energy and structural parameters of binary oxides of groups IIA and IIIB from diffusion quantum Monte Carlo.
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Santana JA, Krogel JT, Kent PR, and Reboredo FA
- Abstract
We have applied the diffusion quantum Monte Carlo (DMC) method to calculate the cohesive energy and the structural parameters of the binary oxides CaO, SrO, BaO, Sc2O3, Y2O3, and La2O3. The aim of our calculations is to systematically quantify the accuracy of the DMC method to study this type of metal oxides. The DMC results were compared with local, semi-local, and hybrid Density Functional Theory (DFT) approximations as well as with experimental measurements. The DMC method yields cohesive energies for these oxides with a mean absolute deviation from experimental measurements of 0.18(2) eV, while with local, semi-local, and hybrid DFT approximations, the deviation is 3.06, 0.94, and 1.23 eV, respectively. For lattice constants, the mean absolute deviations in DMC, local, semi-local, and hybrid DFT approximations are 0.017(1), 0.07, 0.05, and 0.04 Å, respectively. DMC is a highly accurate method, outperforming the DFT approximations in describing the cohesive energies and structural parameters of these binary oxides.
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- 2016
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39. Subjects with isolated GH deficiency due to a null GHRHR mutation eat proportionally more, but healthier than controls.
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Oliveira-Santos AA, Salvatori R, Gomes-Santos E, Santana JA, Leal ÂC, Barbosa RA, Oliveira CR, Souza AH, Valença EH, and Aguiar-Oliveira MH
- Subjects
- Adult, Aged, Brazil, Cross-Sectional Studies, Dwarfism, Pituitary physiopathology, Energy Intake genetics, Female, Humans, Male, Middle Aged, Mutation, Dwarfism, Pituitary genetics, Eating physiology, Feeding Behavior physiology, Food Preferences physiology, Receptors, Neuropeptide genetics, Receptors, Pituitary Hormone-Regulating Hormone genetics
- Abstract
The GH/IGF-I axis has important interactions with the alimentary system and with the balance between energy intake (EI) and energy requirement (ER). Reduced EI has been described in adult-onset acquired GH deficiency (GHD). Individuals from the Brazilian Itabaianinha cohort, with isolated GHD (IGHD) due to a homozygous mutation (c.57+1G→A) in the GHRH receptor gene, are an ideal model to study the consequences of lifetime GHD. The purpose of this study is to evaluate EI and ER in this untreated IGHD cohort. Cross-sectional study of 24 adult IGHD patients and 23 controls from the same region, matched for age and gender. Estimated EI (EEI) was evaluated by dietary recall, and estimated ER (EER) by the equation of the Dietary Reference Intakes. Fat mass was assessed by DXA. Both EEI and EER were lower in IGHD than controls. However, when corrected by body weight, EEI was higher in IGHD (p = 0.005). IGHD individuals consume in percentage more proteins (p < 0.0001), less carbohydrates (p = 0.013), and equal amount of lipids in comparison to controls. The higher EEI per body weight suggests a possible increase of orexigenic mechanisms in untreated IGHD individuals, ensuring greater caloric intake, which would have adaptive advantages for small-sized individuals in environments with limited access to food. IGHD individuals seem to have a healthier dietary pattern than CO.
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- 2016
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40. Health of Psychiatry Residents: Nutritional Status, Physical Activity, and Mental Health.
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Melo MC, de Bruin VM, das Chagas Medeiros F, Santana JA, Lima AB, and De Francesco Daher E
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- Adult, Alcoholism epidemiology, Anxiety epidemiology, Brazil, Cross-Sectional Studies, Depression epidemiology, Female, Health Status, Humans, Male, Obesity epidemiology, Psychiatric Status Rating Scales, Surveys and Questionnaires, Exercise psychology, Internship and Residency, Mental Health, Nutritional Status, Psychiatry education
- Abstract
Objective: This study aims to analyze mental health, nutritional status, and physical activity in psychiatry residents., Methods: Sixty-two residents were invited and 59 participated (95.2% response). Depressive, anxious, and social phobic symptoms; alcohol use; and nicotine dependence were measured. Body mass index and lifestyle were also evaluated., Results: Almost half of psychiatry residents were overweight or obese, and 61% reported a sedentary lifestyle. Furthermore, 33.9% of residents had high scores for anxiety; 30.5% for social phobia; and 19% for depression. In addition, 81.4% reported alcohol use, and 22% had harmful alcohol use. High scores for anxiety were associated with lower attention and worse relationship with preceptors, and high scores of depressive symptoms were related to a worse relationship with patients and preceptors. Anxiety was associated with depressive symptoms (p < 0.001) and social phobia (p = 0.006)., Conclusion: The findings of this study highlight high rates of overweight/obesity, physical inactivity, and depressive and anxiety symptoms in psychiatric residents.
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- 2016
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41. Sleep Quality Among Psychiatry Residents.
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Carvalho Aguiar Melo M, das Chagas Medeiros F, Meireles Sales de Bruin V, Pinheiro Santana JA, Bastos Lima A, and De Francesco Daher E
- Subjects
- Adult, Cross-Sectional Studies, Female, Humans, Male, Psychiatry education, Young Adult, Anxiety epidemiology, Depression epidemiology, Internship and Residency statistics & numerical data, Phobia, Social epidemiology, Physicians statistics & numerical data, Psychiatry statistics & numerical data, Sleep Wake Disorders epidemiology
- Abstract
Objective: Medical residency programs are traditionally known for long working hours, which can be associated with a poor quality of sleep and daytime sleepiness. However, few studies have focused on this theme. Our objective was to investigate sleep quality, daytime sleepiness, and their relation with anxiety, social phobia, and depressive symptoms., Methods: This cross-sectional observational study involved 59 psychiatry residents. The Pittsburgh Sleep Quality Index (PSQI) and the Epworth Sleepiness Scale (ESS) were used to measure the quality of sleep and excessive daytime sleepiness ([EDS] and ESS > 10), respectively., Results: Among the 59 psychiatry residents, 59.3% had poor sleep quality (PSQI > 5) and 28.8% had EDS. Poor sleep quality was associated with higher EDS (P = 0.03) and the year of residency program (P = 0.03). Only 20% of residents with poor sleep had consulted at least once for sleep problems; 54.2% had used medications for sleep; and 16.9% were using medications at the time of interview. Only 30% obtained medication during medical consultations. Poor sleep was associated with irregular sleep hours (P = 0.001) and long periods lying down without sleep (P = 0.03). Poor sleep quality was also associated with high scores of anxiety symptoms (P < 0.001) and social phobia symptoms (P = 0.02)., Conclusion: Psychiatry residents frequently have poor sleep quality and EDS. Considering that sleep disorders can affect quality of life, predispose to metabolic syndrome, and be associated with worse performance at work, attention to this clinical problem is needed., (© The Author(s) 2016.)
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- 2016
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42. Many-body ab initio diffusion quantum Monte Carlo applied to the strongly correlated oxide NiO.
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Mitra C, Krogel JT, Santana JA, and Reboredo FA
- Abstract
We present a many-body diffusion quantum Monte Carlo (DMC) study of the bulk and defect properties of NiO. We find excellent agreement with experimental values, within 0.3%, 0.6%, and 3.5% for the lattice constant, cohesive energy, and bulk modulus, respectively. The quasiparticle bandgap was also computed, and the DMC result of 4.72 (0.17) eV compares well with the experimental value of 4.3 eV. Furthermore, DMC calculations of excited states at the L, Z, and the gamma point of the Brillouin zone reveal a flat upper valence band for NiO, in good agreement with Angle Resolved Photoemission Spectroscopy results. To study defect properties, we evaluated the formation energies of the neutral and charged vacancies of oxygen and nickel in NiO. A formation energy of 7.2 (0.15) eV was found for the oxygen vacancy under oxygen rich conditions. For the Ni vacancy, we obtained a formation energy of 3.2 (0.15) eV under Ni rich conditions. These results confirm that NiO occurs as a p-type material with the dominant intrinsic vacancy defect being Ni vacancy.
- Published
- 2015
- Full Text
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43. Brucellosis in working equines of cattle farms from Minas Gerais State, Brazil.
- Author
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Junqueira DG Jr, Dorneles EM, Gonçalves VS, Santana JA, Almeida VM, Nicolino RR, Silva MX, Mota AL, Veloso FP, Stynen AP, Heinemann MB, and Lage AP
- Subjects
- Animal Husbandry, Animals, Brazil epidemiology, Brucellosis epidemiology, Brucellosis microbiology, Cattle, Cattle Diseases microbiology, Cross-Sectional Studies, Female, Horse Diseases microbiology, Horses, Male, Prevalence, Risk Factors, Seroepidemiologic Studies, Antibodies, Bacterial blood, Brucella isolation & purification, Brucellosis veterinary, Cattle Diseases epidemiology, Horse Diseases epidemiology
- Abstract
The present survey aimed at estimating the seroprevalence of brucellosis in working equines of cattle farms from Minas Gerais State, Brazil, and investigating risk factors associated with the infection. Serum samples from 6439 animals, including 5292 horses, 1037 mules and 110 donkeys, were collected from 1936 herds, between September 2003 and March 2004, in 848 municipalities from the state of Minas Gerais, Brazil. The prevalence of antibodies against smooth Brucella spp. found in equines from Minas Gerais State was 1.37% (95% CI: 0.97-1.78), resulting in a prevalence of herds with infected animals of 4.28% (95% CI: 4.21-4.36). There were differences between regions but these were not of major epidemiological relevance nor were most of them statistically significant, given the considerable overlap of confidence intervals. Nevertheless, the point estimates suggest that the three northeastern regions have slightly higher prevalence than the rest of the state, both at the herd and animal levels. No association of Brucella spp. seropositivity with sex, age or host was observed. In conclusion, the present study showed a low but widespread prevalence of antibodies against smooth Brucella in equines kept in cattle farms in Minas Gerais, a state where bovine brucellosis is also widespread albeit with low prevalence., (Copyright © 2015 Elsevier B.V. All rights reserved.)
- Published
- 2015
- Full Text
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44. Structural stability and defect energetics of ZnO from diffusion quantum Monte Carlo.
- Author
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Santana JA, Krogel JT, Kim J, Kent PR, and Reboredo FA
- Abstract
We have applied the many-body ab initio diffusion quantum Monte Carlo (DMC) method to study Zn and ZnO crystals under pressure and the energetics of the oxygen vacancy, zinc interstitial, and hydrogen impurities in ZnO. We show that DMC is an accurate and practical method that can be used to characterize multiple properties of materials that are challenging for density functional theory (DFT) approximations. DMC agrees with experimental measurements to within 0.3 eV, including the band-gap of ZnO, the ionization potential of O and Zn, and the atomization energy of O2, ZnO dimer, and wurtzite ZnO. DMC predicts the oxygen vacancy as a deep donor with a formation energy of 5.0(2) eV under O-rich conditions and thermodynamic transition levels located between 1.8 and 2.5 eV from the valence band maximum. Our DMC results indicate that the concentration of zinc interstitial and hydrogen impurities in ZnO should be low under n-type and Zn- and H-rich conditions because these defects have formation energies above 1.4 eV under these conditions. Comparison of DMC and hybrid functionals shows that these DFT approximations can be parameterized to yield a general correct qualitative description of ZnO. However, the formation energy of defects in ZnO evaluated with DMC and hybrid functionals can differ by more than 0.5 eV.
- Published
- 2015
- Full Text
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45. An assessment of mangrove forest in northwestern Mexico using the Google Earth Engine cloud computing platform.
- Author
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Valderrama-Landeros, Luis, Troche-Souza, Carlos, Alcántara-Maya, José A., Velázquez-Salazar, Samuel, Vázquez-Balderas, Berenice, Villeda-Chávez, Edgar, Cruz-López, María I., Ressl, Rainer, Flores-Verdugo, Francisco, and Flores-de-Santiago, Francisco
- Subjects
MANGROVE forests ,CLIMATE change mitigation ,COMPUTING platforms ,CLOUD computing ,VEGETATION classification - Abstract
Mangrove forests are commonly mapped using spaceborne remote sensing data due to the challenges of field endeavors in such harsh environments. However, these methods usually require a substantial level of manual processing for each image. Hence, conservation practitioners prioritize using cloud computing platforms to obtain accurate canopy classifications of large extensions of mangrove forests. The objective of this study was to analyze the spatial distribution and rate of change (area gain and loss) of the red mangrove (Rhizophora mangle) and other dominant mangrove species, mainly Avicennia germinans and Laguncularia racemosa, between 2015 and 2020 throughout the northwestern coast of Mexico. Bimonthly data of the Combined Mangrove Recognition Index (CMRI) from all available Sentinel-2 data were processed with the Google Earth Engine cloud computing platform. The results indicated an extension of 42865 ha of red mangrove and 139602 ha of other dominant mangrove species in the Gulf of California and the Pacific northwestern coast of Mexico for 2020. The mangrove extension experienced a notable decline of 1817 ha from 2015 to 2020, largely attributed to the expansion of aquaculture ponds and the destructive effects of hurricanes. Considering the two mangrove classes, the overall classification accuracies were 90% and 92% for the 2015 and 2020 maps, respectively. The advantages of the method compared to supervised classifications and traditional vegetation indices are discussed, as are the disadvantages concerning the spatial resolution and the minimum detection area. The work is a national effort to assist in decision-making to prioritize resource allocations for blue carbon, rehabilitation, and climate change mitigation programs. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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46. Antimicrobial resistance and virulence profiling of Staphylococcus pseudintermedius isolated from cats, Bangladesh.
- Author
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Rana, Eaftekhar Ahmed, Nizami, Tanvir Ahmad, Islam, Md. Sayedul, Sarker, Subrata, Rahman, Hafizar, Hoque, Azizul, and Rahman, Mizanur
- Published
- 2024
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47. Exposure to polycyclic aromatic hydrocarbons (PAHs) and bladder cancer: evaluation from a gene-environment perspective in a hospital-based case-control study in the Canary Islands (Spain).
- Author
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Boada LD, Henríquez-Hernández LA, Navarro P, Zumbado M, Almeida-González M, Camacho M, Álvarez-León EE, Valencia-Santana JA, and Luzardo OP
- Subjects
- Adult, Aged, Aged, 80 and over, Case-Control Studies, Coffee metabolism, Female, Gas Chromatography-Mass Spectrometry, Hospitalization, Humans, Male, Middle Aged, Risk Factors, Smoking Prevention, Spain epidemiology, Urinary Bladder Neoplasms chemically induced, Young Adult, Environmental Pollutants blood, Polycyclic Aromatic Hydrocarbons blood, Urinary Bladder Neoplasms epidemiology
- Abstract
Background: Exposure to polycyclic aromatic hydrocarbons (PAHs) has been linked to bladder cancer., Objective: To evaluate the role of PAHs in bladder cancer, PAHs serum levels were measured in patients and controls from a case-control study., Methods: A total of 140 bladder cancer patients and 206 healthy controls were included in the study. Sixteen PAHs were analyzed from the serum of subjects by gas chromatography-mass spectrometry., Results: Serum PAHs did not appear to be related to bladder cancer risk, although the profile of contamination by PAHs was different between patients and controls: pyrene (Pyr) was solely detected in controls and chrysene (Chry) was exclusively detected in the cases. Phenanthrene (Phe) serum levels were inversely associated with bladder cancer (OR = 0·79, 95%CI = 0·64-0·99, P = 0·030), although this effect disappeared when the allelic distribution of glutathione-S-transferase polymorphisms of the population was introduced into the model (multinomial logistic regression test, P = 0·933). Smoking (OR = 3·62, 95%CI = 1·93-6·79, P<0·0001) and coffee consumption (OR = 1·73, 95%CI = 1·04-2·86, P = 0·033) were relevant risk factors for bladder cancer., Conclusions: Specific PAH mixtures may play a relevant role in bladder cancer, although such effect seems to be highly modulated by polymorphisms in genes encoding xenobiotic-metabolizing enzymes.
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- 2015
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48. Successes and failures of Hubbard-corrected density functional theory: the case of Mg doped LiCoO2.
- Author
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Santana JA, Kim J, Kent PR, and Reboredo FA
- Abstract
We have evaluated the successes and failures of the Hubbard-corrected density functional theory approach to study Mg doping of LiCoO2. We computed the effect of the U parameter on the energetic, geometric, and electronic properties of two possible doping mechanisms: (1) substitution of Mg onto a Co (or Li) site with an associated impurity state and (2) formation of impurity-state-free complexes of substitutional Mg and point defects in LiCoO2. We find that formation of impurity states results in changes on the valency of Co in LiCoO2. Variation of the Co U shifts the energy of the impurity state, resulting in energetic, geometric, and electronic properties that depend significantly on the specific value of U. In contrast, the properties of the impurity-state-free complexes are insensitive to U. These results identify reasons for the strong dependence on the doping properties on the chosen value of U and for the overall difficulty of achieving agreement with the experimentally known energetic and electronic properties of doped transition metal oxides such as LiCoO2.
- Published
- 2014
- Full Text
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49. Increased visceral adiposity and cortisol to cortisone ratio in adults with congenital lifetime isolated GH deficiency.
- Author
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Gomes-Santos E, Salvatori R, Ferrão TO, Oliveira CR, Diniz RD, Santana JA, Pereira FA, Barbosa RA, Souza AH, Melo EV, Epitácio-Pereira CC, Oliveira-Santos AA, Oliveira IA, Machado JA, Santana-Júnior FJ, Barreto-Filho JA, and Aguiar-Oliveira MH
- Subjects
- Adult, Body Composition, Body Fat Distribution, Cross-Sectional Studies, Dwarfism, Pituitary congenital, Dwarfism, Pituitary diagnostic imaging, Female, Human Growth Hormone blood, Humans, Insulin Resistance, Male, Middle Aged, Ultrasonography, Waist-Hip Ratio, Cortisone blood, Dwarfism, Pituitary metabolism, Human Growth Hormone deficiency, Hydrocortisone blood, Intra-Abdominal Fat diagnostic imaging, Subcutaneous Fat diagnostic imaging
- Abstract
Context: Adult-onset GH deficiency (GHD) increases visceral adiposity and the activity of the enzyme 11β-hydroxysteroid dehydrogenase, which converts cortisone (E) to cortisol (F), both linked to insulin resistance and increased cardiovascular risk. Conversely, we reported that adults with congenital isolated GHD (IGHD) have increased insulin sensitivity., Objective: To assess the type of fat distribution and the amount of visceral and sc fat and to correlate them to the F/E ratio in adults with untreated IGHD due to a mutation in the GHRH receptor gene., Methods: Body composition was assessed by dual-energy x-ray absorptiometry, thickness of sc and visceral fat was measured by sonography, and serum F and E were measured in 23 IGHD subjects and 21 age-matched controls., Results: Waist/hip ratio (WHR), trunk fat, and trunk/extremity fat (TR/EXT) ratio were higher in IGHD subjects. Visceral fat index (VFI) (but not sc fat index [SFI]) was higher in IGHD. F and F/E ratio were also higher in IGHD. In all 44 individuals, WHR correlated with TR/EXT ratio, thickness of visceral fat, VFI/SFI ratio, F, and F/E ratio. TR/EXT ratio correlated with visceral fat thickness, VFI/SFI ratio, and F. Age had a significant effect on VFI and on F/E ratio. Body mass index SD score and WHR have a similar significant effect on TR/EXT ratio and on F/E ratio., Conclusions: Lifetime congenital untreated IGHD causes increased visceral adiposity with a high F/E ratio. However, the increased insulin sensitivity suggests that visceral adiposity needs a minimal GH secretion to translate into increased insulin resistance.
- Published
- 2014
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- View/download PDF
50. Lifetime, untreated isolated GH deficiency due to a GH-releasing hormone receptor mutation has beneficial consequences on bone status in older individuals, and does not influence their abdominal aorta calcification.
- Author
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Souza AH, Farias MI, Salvatori R, Silva GM, Santana JA, Pereira FA, de Paula FJ, Valença EH, Melo EV, Barbosa RA, Pereira RM, Gois-Junior MB, and Aguiar-Oliveira MH
- Subjects
- Aged, Aged, 80 and over, Aorta, Abdominal pathology, Case-Control Studies, Dwarfism, Pituitary genetics, Female, Health Status, Human Growth Hormone deficiency, Humans, Male, Middle Aged, Mutation, Receptors, Neuropeptide genetics, Receptors, Pituitary Hormone-Regulating Hormone genetics, Spinal Fractures epidemiology, Spine, Aging physiology, Aortic Diseases epidemiology, Bone Density, Dwarfism, Pituitary epidemiology, Vascular Calcification epidemiology
- Abstract
The GH/IGF-I axis has essential roles in regulating bone and vascular status. The age-related decrease in GH secretion ("somatopause") may contribute to osteoporosis and atherosclerosis, commonly observed in the elderly. Adult-onset GH deficiency (GHD) has been reported to be associated with reduced bone mineral density (BMD), increased risk of fractures, and premature atherosclerosis. We have shown the young adult individuals with isolated GHD (IGHD) due to a homozygous for the c.57+1G>A GHRH receptor gene mutation have normal volumetric BMD (vBMD), and not develop premature atherosclerosis, despite adverse risk factor profile. However, the bone and vascular impact of lifetime GHD on the aging process remains unknown. We studied a group of ten older IGHD subjects (≥60 years) homozygous for the mutation, comparing them with 20 age- and gender-matched controls (CO). Areal BMD was measured, and vBMD was calculated at the lumbar spine and total hip. Vertebral fractures and abdominal aortic calcifications (expressed as calcium score) were also assessed. Areal BMD was lower in IGHD, but vBMD was similar in the two groups. The percent of fractured individuals was similar, but the mean number of fractures per individual was lower in IGHD than CO. Calcium score was similar in the two groups. A positive correlation was found between calcium score and number of fractures. Untreated lifetime IGHD has beneficial consequences on bone status and does not have a deleterious effect on abdominal aorta calcification.
- Published
- 2014
- Full Text
- View/download PDF
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