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Collective Excitations in Protein as a Measure of Balance Between its Softness and Rigidity.

Authors :
Shrestha, Utsab R.
Bhowmik, Debsindhu
Van Delinder, Kurt W.
Mamontov, Eugene
O'Neill, Hugh
Qiu Zhang
Alatas, Ahmet
Xiang-Qiang Chu
Source :
Journal of Physical Chemistry B. Feb2017, Vol. 121 Issue 5, p923-930. 8p.
Publication Year :
2017

Abstract

In this article, we elucidate the protein activity from the perspective of protein softness and flexibility by studying the collective phonon-like excitations in a globular protein, human serum albumin (HSA), and taking advantage of the state-of-the-art inelastic X-ray scattering (IXS) technique. Such excitations demonstrate that the protein becomes softer upon thermal denaturation due to disruption of weak noncovalent bonds. On the other hand, no significant change in the local excitations is detected in ligand-(drugs) bound HSA compared to the ligand-free HSA. Our results clearly suggest that the protein conformational flexibility and rigidity are balanced by the native protein structure for biological activity. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
15206106
Volume :
121
Issue :
5
Database :
Academic Search Index
Journal :
Journal of Physical Chemistry B
Publication Type :
Academic Journal
Accession number :
121265518
Full Text :
https://doi.org/10.1021/acs.jpcb.6b10245