26 results on '"van Liempd, Sebastiaan M."'
Search Results
2. Role of Aramchol in steatohepatitis and fibrosis in mice.
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Iruarrizaga-Lejarreta, Marta, Varela-Rey, Marta, Fernández-Ramos, David, Martínez-Arranz, Ibon, Delgado, Teresa C, Simon, Jorge, Juan, Virginia Gutiérrez-de, delaCruz-Villar, Laura, Azkargorta, Mikel, Lavin, José L, Mayo, Rebeca, Van Liempd, Sebastiaan M, Aurrekoetxea, Igor, Buqué, Xabier, Cave, Donatella Delle, Peña, Arantza, Rodríguez-Cuesta, Juan, Aransay, Ana M, Elortza, Felix, Falcón-Pérez, Juan M, Aspichueta, Patricia, Hayardeny, Liat, Noureddin, Mazen, Sanyal, Arun J, Alonso, Cristina, Anguita, Juan, Martínez-Chantar, María Luz, Lu, Shelly C, and Mato, José M
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1-carbon metabolism ,Lipid metabolism ,Mouse model ,S-adenosylmethionine - Abstract
Nonalcoholic steatohepatitis (NASH) is the advanced form of nonalcoholic fatty liver disease (NAFLD) which sets the stage for further liver damage. The mechanism for the progression of NASH involves multiple parallel hits including oxidative stress, mitochondrial dysfunction, inflammation and others. Manipulation of any of these pathways may be an approach to prevent NASH development and progression. Aramchol (arachidyl-amido cholanoic acid) is presently in a phase IIb NASH study. The aim of this study was to investigate Aramchol's mechanism of action and its effect on fibrosis using the methionine- and choline-deficient (MCD) diet model of NASH. We collected liver and serum from mice fed a MCD diet containing 0.1% methionine (0.1MCD) for four weeks, which developed steatohepatitis and fibrosis, as well as mice receiving a control diet; the metabolomes and proteomes were determined. 0.1MCD fed mice were given Aramchol (5mg/kg/day for the last 2 weeks); liver samples were analyzed histologically. Aramchol administration reduced features of steatohepatitis and fibrosis in 0.1MCD fed mice. Aramchol downregulated stearoyl-CoA desaturase 1 (SCD1), a key enzyme involved in triglyceride biosynthesis whose loss enhances fatty acid β-oxidation. Aramchol increased the flux through the transsulfuration pathway, leading to a rise in glutathione (GSH) and GSH/GSSG ratio, the main cellular antioxidant that maintains intracellular redox status. Comparison of serum metabolomic pattern between 0.1MCD fed mice and NAFLD patients showed a substantial overlap. Conclusions:Aramchol treatment improved steatohepatitis and fibrosis by 1) decreasing SCD1, and 2) increasing the flux through the transsulfuration pathway maintaining cellular redox homeostasis. We also demonstrated that the 0.1MCD model resembles the metabolic phenotype observed in about 50% of NAFLD patients, which supports the potential use of Aramchol in NASH treatment.
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- 2017
3. Metabolomic Identification of Subtypes of Nonalcoholic Steatohepatitis
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Alonso, Cristina, Fernández-Ramos, David, Varela-Rey, Marta, Martínez-Arranz, Ibon, Navasa, Nicolás, Van Liempd, Sebastiaan M, Trueba, José L Lavín, Mayo, Rebeca, Ilisso, Concetta P, de Juan, Virginia G, Iruarrizaga-Lejarreta, Marta, delaCruz-Villar, Laura, Mincholé, Itziar, Robinson, Aaron, Crespo, Javier, Martín-Duce, Antonio, Romero-Gómez, Manuel, Sann, Holger, Platon, Julian, Van Eyk, Jennifer, Aspichueta, Patricia, Noureddin, Mazen, Falcón-Pérez, Juan M, Anguita, Juan, Aransay, Ana M, Martínez-Chantar, María Luz, Lu, Shelly C, and Mato, José M
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Biomedical and Clinical Sciences ,Clinical Sciences ,Liver Disease ,Hepatitis ,Digestive Diseases ,Chronic Liver Disease and Cirrhosis ,4.1 Discovery and preclinical testing of markers and technologies ,Oral and gastrointestinal ,Adult ,Animals ,Biomarkers ,Ceramides ,Diglycerides ,Fatty Acids ,Female ,Humans ,Lipid Metabolism ,Male ,Metabolome ,Methionine Adenosyltransferase ,Mice ,Mice ,Inbred C57BL ,Mice ,Knockout ,Middle Aged ,Non-alcoholic Fatty Liver Disease ,S-Adenosylmethionine ,Triglycerides ,Mouse Model ,1-Carbon Metabolism ,Prognostic ,Neurosciences ,Paediatrics and Reproductive Medicine ,Gastroenterology & Hepatology ,Clinical sciences ,Nutrition and dietetics - Abstract
Background & aimsNonalcoholic fatty liver disease (NAFLD) is a consequence of defects in diverse metabolic pathways that involve hepatic accumulation of triglycerides. Features of these aberrations might determine whether NAFLD progresses to nonalcoholic steatohepatitis (NASH). We investigated whether the diverse defects observed in patients with NAFLD are caused by different NAFLD subtypes with specific serum metabolomic profiles, and whether these can distinguish patients with NASH from patients with simple steatosis.MethodsWe collected liver and serum from methionine adenosyltransferase 1a knockout (MAT1A-KO) mice, which have chronically low levels of hepatic S-adenosylmethionine (SAMe) and spontaneously develop steatohepatitis, as well as C57Bl/6 mice (controls); the metabolomes of all samples were determined. We also analyzed serum metabolomes of 535 patients with biopsy-proven NAFLD (353 with simple steatosis and 182 with NASH) and compared them with serum metabolomes of mice. MAT1A-KO mice were also given SAMe (30 mg/kg/day for 8 weeks); liver samples were collected and analyzed histologically for steatohepatitis.ResultsLivers of MAT1A-KO mice were characterized by high levels of triglycerides, diglycerides, fatty acids, ceramides, and oxidized fatty acids, as well as low levels of SAMe and downstream metabolites. There was a correlation between liver and serum metabolomes. We identified a serum metabolomic signature associated with MAT1A-KO mice that also was present in 49% of the patients; based on this signature, we identified 2 NAFLD subtypes. We identified specific panels of markers that could distinguish patients with NASH from patients with simple steatosis for each subtype of NAFLD. Administration of SAMe reduced features of steatohepatitis in MAT1A-KO mice.ConclusionsIn an analysis of serum metabolomes of patients with NAFLD and MAT1A-KO mice with steatohepatitis, we identified 2 major subtypes of NAFLD and markers that differentiate steatosis from NASH in each subtype. These might be used to monitor disease progression and identify therapeutic targets for patients.
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- 2017
4. Structure and function study of the complex that synthesizes S-adenosylmethionine
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Murray, Ben, Antonyuk, Svetlana V, Marina, Alberto, Van Liempd, Sebastiaan M, Lu, Shelly C, Mato, Jose M, Hasnain, S Samar, and Rojas, Adriana L
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Digestive Diseases ,Liver Disease ,Complementary and Integrative Health ,Liver Cancer ,Orphan Drug ,Cancer ,Rare Diseases ,Generic health relevance ,methionine adenosyltransferases ,cell growth ,liver cancer ,X-ray scattering ,methylation ,drug design ,Atomic ,Molecular ,Nuclear ,Particle and Plasma Physics ,Condensed Matter Physics ,Physical Chemistry (incl. Structural) - Abstract
S-Adenosylmethionine (SAMe) is the principal methyl donor of the cell and is synthesized via an ATP-driven process by methionine adenosyltransferase (MAT) enzymes. It is tightly linked with cell proliferation in liver and colon cancer. In humans, there are three genes, mat1A, mat2A and mat2B, which encode MAT enzymes. mat2A and mat2B transcribe MATα2 and MATβ enzyme subunits, respectively, with catalytic and regulatory roles. The MATα2β complex is expressed in nearly all tissues and is thought to be essential in providing the necessary SAMe flux for methylation of DNA and various proteins including histones. In human hepatocellular carcinoma mat2A and mat2B genes are upregulated, highlighting the importance of the MATα2β complex in liver disease. The individual subunits have been structurally characterized but the nature of the complex has remained elusive despite its existence having been postulated for more than 20 years and the observation that MATβ is often co-localized with MATα2. Though SAMe can be produced by MAT(α2)4 alone, this paper shows that the V max of the MATα2β complex is three- to fourfold higher depending on the variants of MATβ that participate in complex formation. Using X-ray crystallography and solution X-ray scattering, the first structures are provided of this 258 kDa functional complex both in crystals and solution with an unexpected stoichiometry of 4α2 and 2βV2 subunits. It is demonstrated that the N-terminal regulates the activity of the complex and it is shown that complex formation takes place surprisingly via the C-terminal of MATβV2 that buries itself in a tunnel created at the interface of the MAT(α2)2. The structural data suggest a unique mechanism of regulation and provide a gateway for structure-based drug design in anticancer therapies.
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- 2014
5. Ammonium nutrition interacts with iron homeostasis in Brachypodium distachyon
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Eusko Jaurlaritza, Ministerio de Economía y Competitividad (España), Ministerio de Ciencia, Tecnología e Innovación (Colombia), European Commission, Alvarez-Fernández, Ana [0000-0003-4568-1201], Peña, Marlon de la, Marín-Peña, Agustín Javier, Urmeneta, Leyre, Coleto, Inmaculada, Castillo-González, Jorge, van Liempd, Sebastiaan M. J, Falcón-Pérez, Juan M., Álvarez-Fernández, Ana, González-Moro, María Begoña, Marino, Daniel, Eusko Jaurlaritza, Ministerio de Economía y Competitividad (España), Ministerio de Ciencia, Tecnología e Innovación (Colombia), European Commission, Alvarez-Fernández, Ana [0000-0003-4568-1201], Peña, Marlon de la, Marín-Peña, Agustín Javier, Urmeneta, Leyre, Coleto, Inmaculada, Castillo-González, Jorge, van Liempd, Sebastiaan M. J, Falcón-Pérez, Juan M., Álvarez-Fernández, Ana, González-Moro, María Begoña, and Marino, Daniel
- Abstract
Most plant species develop stress symptoms when exposed to high ammonium (NH4+) concentrations. The root is the first organ in contact with high NH4+ and therefore the first barrier to cope with ammonium stress. In this work, we focused on root adaptation to ammonium nutrition in the model plant Brachypodium distachyon. Proteome analysis revealed changes associated with primary metabolism, cell wall remodelling, and redox homeostasis. In addition, it showed a strong induction of proteins related to methionine (Met) metabolism and phytosiderophore (PS) synthesis in ammonium-fed plants. In agreement with this, we show how ammonium nutrition impacts Met/S-adenosyl-Met and PS metabolic pathways together with increasing root iron content. Nevertheless, ammonium-fed plants displayed higher sensitivity to iron deficiency, suggesting that ammonium nutrition triggers impaired iron utilization and root to shoot transport, which entailed an induction in iron-related responses. Overall, this work demonstrates the importance of iron homeostasis during ammonium nutrition and paves a new way to better understand and improve ammonium use efficiency and tolerance.
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- 2022
6. Additional file 10 of New molecular mechanisms in cholangiocarcinoma: signals triggering interleukin-6 production in tumor cells and KRAS co-opted epigenetic mediators driving metabolic reprogramming
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Colyn, Leticia, Alvarez-Sola, Gloria, Latasa, M. Ujue, Uriarte, Iker, Herranz, Jose M., Arechederra, Maria, Vlachogiannis, George, Rae, Colin, Pineda-Lucena, Antonio, Casadei-Gardini, Andrea, Pedica, Federica, Aldrighetti, Luca, López-López, Angeles, López-Gonzálvez, Angeles, Barbas, Coral, Ciordia, Sergio, Van Liempd, Sebastiaan M., Falcón-Pérez, Juan M., Urman, Jesus, Sangro, Bruno, Vicent, Silve, Iraburu, Maria J., Prosper, Felipe, Nelson, Leonard J., Banales, Jesus M., Martinez-Chantar, Maria Luz, Marin, Jose J. G., Braconi, Chiara, Trautwein, Christian, Corrales, Fernando J., Cubero, F. Javier, Berasain, Carmen, Fernandez-Barrena, Maite G., and Avila, Matias A.
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Data_FILES - Abstract
Additional file 10.
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- 2022
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7. Ammonium nutrition interacts with iron homeostasis in Brachypodium distachyon
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De la Peña, Marlon, primary, Marín-Peña, Agustín Javier, additional, Urmeneta, Leyre, additional, Coleto, Inmaculada, additional, Castillo-González, Jorge, additional, van Liempd, Sebastiaan M, additional, Falcón-Pérez, Juan M, additional, Álvarez-Fernández, Ana, additional, González-Moro, María Begoña, additional, and Marino, Daniel, additional
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- 2021
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8. Corrigendum: mTORC1-dependent AMD1 regulation sustains polyamine metabolism in prostate cancer
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Zabala-Letona, Amaia, Arruabarrena-Aristorena, Amaia, Martn-Martn, Natalia, Fernandez-Ruiz, Sonia, Sutherland, James D., Clasquin, Michelle, Tomas-Cortazar, Julen, Jimenez, Jose, Torres, Ines, Quang, Phong, Ximenez-Embun, Pilar, Bago, Ruzica, Ugalde-Olano, Aitziber, Loizaga-Iriarte, Ana, Lacasa-Viscasillas, Isabel, Unda, Miguel, Torrano, Vernica, Cabrera, Diana, van Liempd, Sebastiaan M., Cendon, Ylenia, Castro, Elena, Murray, Stuart, Revandkar, Ajinkya, Alimonti, Andrea, Zhang, Yinan, Barnett, Amelia, Lein, Gina, Pirman, David, Cortazar, Ana R., Arreal, Leire, Prudkin, Ludmila, Astobiza, Ianire, Valcarcel-Jimenez, Lorea, Zuiga-Garca, Patricia, Fernandez-Dominguez, Itziar, Piva, Marco, Caro-Maldonado, Alfredo, Snchez-Mosquera, Pilar, Castillo-Martn, Mireia, Serra, Violeta, Beraza, Naiara, Gentilella, Antonio, Thomas, George, Azkargorta, Mikel, Elortza, Felix, Farrs, Rosa, Olmos, David, Efeyan, Alejo, Anguita, Juan, Muoz, Javier, Falcn-Prez, Juan M., Barrio, Rosa, Macarulla, Teresa, Mato, Jose M., Martinez-Chantar, Maria L., Cordon-Cardo, Carlos, Aransay, Ana M., Marks, Kevin, Baselga, Jos, Tabernero, Josep, Nuciforo, Paolo, Manning, Brendan D., Marjon, Katya, and Carracedo, Arkaitz
- Abstract
Author(s): Amaia Zabala-Letona; Amaia Arruabarrena-Aristorena; Natalia Martn-Martn; Sonia Fernandez-Ruiz; James D. Sutherland; Michelle Clasquin; Julen Tomas-Cortazar; Jose Jimenez; Ines Torres; Phong Quang; Pilar Ximenez-Embun; Ruzica Bago; Aitziber Ugalde-Olano; Ana Loizaga-Iriarte; [...]
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- 2018
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9. An on-line post-column detection system for the detection of reactive-oxygen-species-producing compounds and antioxidants in mixtures
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Kool, Jeroen, Van Liempd, Sebastiaan M., Harmsen, Stefan, Schenk, Tim, Irth, Hubertus, Commandeur, Jan N. M., and Vermeulen, Nico P. E.
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- 2007
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10. Borrelia burgdorferi infection induces long-term memory-like responses in macrophages with tissue-wide consequences in the heart
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Ministerio de Ciencia, Innovación y Universidades (España), Ministerio de Economía y Competitividad (España), Agencia Estatal de Investigación (España), European Commission, Instituto de Salud Carlos III, Eusko Jaurlaritza, Fundación Vasca de Innovación e Investigación Sanitarias, Euskal Irrati Telebista, Junta de Andalucía, Fundación Domingo Martínez, Universidad del País Vasco, Diputación Foral de Bizkaia, Centro de Investigación Biomédica en Red Enfermedades Hepáticas y Digestivas (España), Fundación Jesús de Gangoiti Barrera, Barriales, Diego, Martín-Ruiz, Itziar, Carreras-González, Ana, Montesinos-Robledo, Marta, Azkargorta, Mikel, Iloro, Ibon, Escobés, Iraide, Martín-Mateos, Teresa, Atondo, Estíbaliz, Palacios, Ainhoa, González-López, Mónika, Bárcena, Laura, Cortázar, Ana R., Cabrera, Diana, Peña-Cearra, Ainize, van Liempd, Sebastiaan M., Falcón-Pérez, Juan M., Pascual-Itoiz, Miguel Ángel, Flores, Juana María, Abecia, Leticia, Pellón, Aize, Martínez-Chantar, María Luz, Aransay, Ana M., Pascual Bravo, Alberto, Elortza, Felix, Berra, Edurne, Lavín, José Luis, Rodríguez, Héctor, Anguita, Juan, Ministerio de Ciencia, Innovación y Universidades (España), Ministerio de Economía y Competitividad (España), Agencia Estatal de Investigación (España), European Commission, Instituto de Salud Carlos III, Eusko Jaurlaritza, Fundación Vasca de Innovación e Investigación Sanitarias, Euskal Irrati Telebista, Junta de Andalucía, Fundación Domingo Martínez, Universidad del País Vasco, Diputación Foral de Bizkaia, Centro de Investigación Biomédica en Red Enfermedades Hepáticas y Digestivas (España), Fundación Jesús de Gangoiti Barrera, Barriales, Diego, Martín-Ruiz, Itziar, Carreras-González, Ana, Montesinos-Robledo, Marta, Azkargorta, Mikel, Iloro, Ibon, Escobés, Iraide, Martín-Mateos, Teresa, Atondo, Estíbaliz, Palacios, Ainhoa, González-López, Mónika, Bárcena, Laura, Cortázar, Ana R., Cabrera, Diana, Peña-Cearra, Ainize, van Liempd, Sebastiaan M., Falcón-Pérez, Juan M., Pascual-Itoiz, Miguel Ángel, Flores, Juana María, Abecia, Leticia, Pellón, Aize, Martínez-Chantar, María Luz, Aransay, Ana M., Pascual Bravo, Alberto, Elortza, Felix, Berra, Edurne, Lavín, José Luis, Rodríguez, Héctor, and Anguita, Juan
- Abstract
Lyme carditis is an extracutaneous manifestation of Lyme disease characterized by episodes of atrioventricular block of varying degrees and additional, less reported cardiomyopathies. The molecular changes associated with the response to Borrelia burgdorferi over the course of infection are poorly understood. Here, we identify broad transcriptomic and proteomic changes in the heart during infection that reveal a profound down-regulation of mitochondrial components. We also describe the long-term functional modulation of macrophages exposed to live bacteria, characterized by an augmented glycolytic output, increased spirochetal binding and internalization, and reduced inflammatory responses. In vitro, glycolysis inhibition reduces the production of tumor necrosis factor (TNF) by memory macrophages, whereas in vivo, it produces the reversion of the memory phenotype, the recovery of tissue mitochondrial components, and decreased inflammation and spirochetal burdens. These results show that B. burgdorferi induces long-term, memory-like responses in macrophages with tissue-wide consequences that are amenable to be manipulated in vivo.
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- 2021
11. mTORC1-dependent AMD1 regulation sustains polyamine metabolism in prostate cancer
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Zabala-Letona, Amaia, Arruabarrena-Aristorena, Amaia, Martn-Martn, Natalia, Fernandez-Ruiz, Sonia, Sutherland, James D., Clasquin, Michelle, Tomas-Cortazar, Julen, Jimenez, Jose, Torres, Ines, Quang, Phong, Ximenez-Embun, Pilar, Bago, Ruzica, Ugalde-Olano, Aitziber, Loizaga-Iriarte, Ana, Lacasa-Viscasillas, Isabel, Unda, Miguel, Torrano, Vernica, Cabrera, Diana, van Liempd, Sebastiaan M., Cendon, Ylenia, Castro, Elena, Murray, Stuart, Revandkar, Ajinkya, Alimonti, Andrea, Zhang, Yinan, Barnett, Amelia, Lein, Gina, Pirman, David, Cortazar, Ana R., Arreal, Leire, Prudkin, Ludmila, Astobiza, Ianire, Valcarcel-Jimenez, Lorea, Zuiga-Garca, Patricia, Fernandez-Dominguez, Itziar, Piva, Marco, Caro-Maldonado, Alfredo, Snchez-Mosquera, Pilar, Castillo-Martn, Mireia, Serra, Violeta, Beraza, Naiara, Gentilella, Antonio, Thomas, George, Azkargorta, Mikel, Elortza, Felix, Farrs, Rosa, Olmos, David, Efeyan, Alejo, Anguita, Juan, Muoz, Javier, Falcn-Prez, Juan M., Barrio, Rosa, Macarulla, Teresa, Mato, Jose M., Martinez-Chantar, Maria L., Cordon-Cardo, Carlos, Aransay, Ana M., Marks, Kevin, Baselga, Jos, Tabernero, Josep, Nuciforo, Paolo, Manning, Brendan D., Marjon, Katya, and Carracedo, Arkaitz
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Physiological aspects ,Polyamines -- Physiological aspects ,Prostate cancer -- Physiological aspects ,S-adenosylmethionine -- Physiological aspects - Abstract
Author(s): Amaia Zabala-Letona [1, 2]; Amaia Arruabarrena-Aristorena [1]; Natalia Martn-Martn [1, 2]; Sonia Fernandez-Ruiz [1, 2]; James D. Sutherland [1]; Michelle Clasquin [3]; Julen Tomas-Cortazar [1]; Jose Jimenez [4]; Ines [...]
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- 2017
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12. Online biochemical detection of glutathione-S-transferase P1-specific inhibitors in complex mixtures
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Kool, Jeroen, Eggink, Mark, Van Rossum, Huub, Van Liempd, Sebastiaan M., Van Elswijk, Danny A., Irth, Hubertus, Commandeur, Jan N.M., Meerman, John H.N., and Vermeulen, Nico P.E.
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Usage ,Research ,High resolution spectroscopy -- Usage -- Research ,Glutathione transferase -- Research -- Usage ,Affinity labeling -- Research -- Usage - Abstract
A high-resolution screening (HRS) technology is described, which couples 2 parallel enzyme affinity detection (EAD) systems for substrates and inhibitors of rat cytosolic glutathione-S-transferases (cGSTs) and purified human GST P1 [...]
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- 2007
13. Cytochrome P450 bio-affinity detection coupled to gradient HPLC: On-line screening of affinities to cytochrome P4501A2 and 2D6
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Kool, Jeroen, van Liempd, Sebastiaan M., Harmsen, Stefan, Beckman, Joran, van Elswijk, Danny, Commandeur, Jan. N.M., Irth, Hubertus, and Vermeulen, Nico P.E.
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- 2007
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14. Development of a novel cytochrome P450 bioaffinity detection system coupled online to gradient reversed-phase high-performance liquid chromatography
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Kool, Jeroen, van Liempd, Sebastiaan M., Ramautar, Rawi, Schenk, Tim, Meerman, John H.N., Irth, Hubertus, Commandeur, Jan N.M., and Vermeulen, Nico P.E.
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Analysis ,Research ,High resolution spectroscopy -- Analysis -- Research ,Cytochrome P-450 -- Research -- Analysis ,Liquid chromatography -- Analysis -- Research - Abstract
A high-resolution screening platform, coupling online affinity detection for mammalian cytochrome P450s (Cyt P450s) to gradient reversed-phase high-performance liquid chromatography (HPLC), is described. To this end, the online Cyt P450 [...]
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- 2005
15. Borrelia burgdorferi infection induces long-term memory-like responses in macrophages with tissue-wide consequences in the heart
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Barriales, Diego, primary, Martín-Ruiz, Itziar, additional, Carreras-González, Ana, additional, Montesinos-Robledo, Marta, additional, Azkargorta, Mikel, additional, Iloro, Ibon, additional, Escobés, Iraide, additional, Martín-Mateos, Teresa, additional, Atondo, Estibaliz, additional, Palacios, Ainhoa, additional, Gonzalez-Lopez, Monika, additional, Bárcena, Laura, additional, Cortázar, Ana R., additional, Cabrera, Diana, additional, Peña-Cearra, Ainize, additional, van Liempd, Sebastiaan M., additional, Falcón-Pérez, Juan M., additional, Pascual-Itoiz, Miguel A., additional, Flores, Juana María, additional, Abecia, Leticia, additional, Pellon, Aize, additional, Martínez-Chantar, Maria Luz, additional, Aransay, Ana M., additional, Pascual, Alberto, additional, Elortza, Felix, additional, Berra, Edurne, additional, Lavín, José Luis, additional, Rodríguez, Héctor, additional, and Anguita, Juan, additional
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- 2021
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16. Development and validation of a microsomal online cytochrome P450 bioreactor coupled to solid-phase extraction and reversed-phase liquid chromatography
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van Liempd, Sebastiaan M., Kool, Jeroen, Reinen, Jelle, Schenk, Tim, Meerman, John H.N., Irth, Hubertus, and Vermeulen, Nico P.E.
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- 2005
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17. Erratum: Corrigendum: mTORC1-dependent AMD1 regulation sustains polyamine metabolism in prostate cancer
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Zabala-Letona, Amaia, primary, Arruabarrena-Aristorena, Amaia, additional, Martín-Martín, Natalia, additional, Fernandez-Ruiz, Sonia, additional, Sutherland, James D., additional, Clasquin, Michelle, additional, Tomas-Cortazar, Julen, additional, Jimenez, Jose, additional, Torres, Ines, additional, Quang, Phong, additional, Ximenez-Embun, Pilar, additional, Bago, Ruzica, additional, Ugalde-Olano, Aitziber, additional, Loizaga-Iriarte, Ana, additional, Lacasa-Viscasillas, Isabel, additional, Unda, Miguel, additional, Torrano, Verónica, additional, Cabrera, Diana, additional, van Liempd, Sebastiaan M., additional, Cendon, Ylenia, additional, Castro, Elena, additional, Murray, Stuart, additional, Revandkar, Ajinkya, additional, Alimonti, Andrea, additional, Zhang, Yinan, additional, Barnett, Amelia, additional, Lein, Gina, additional, Pirman, David, additional, Cortazar, Ana R., additional, Arreal, Leire, additional, Prudkin, Ludmila, additional, Astobiza, Ianire, additional, Valcarcel-Jimenez, Lorea, additional, Zuñiga-García, Patricia, additional, Fernandez-Dominguez, Itziar, additional, Piva, Marco, additional, Caro-Maldonado, Alfredo, additional, Sánchez-Mosquera, Pilar, additional, Castillo-Martín, Mireia, additional, Serra, Violeta, additional, Beraza, Naiara, additional, Gentilella, Antonio, additional, Thomas, George, additional, Azkargorta, Mikel, additional, Elortza, Felix, additional, Farràs, Rosa, additional, Olmos, David, additional, Efeyan, Alejo, additional, Anguita, Juan, additional, Muñoz, Javier, additional, Falcón-Pérez, Juan M., additional, Barrio, Rosa, additional, Macarulla, Teresa, additional, Mato, Jose M., additional, Martinez-Chantar, Maria L., additional, Cordon-Cardo, Carlos, additional, Aransay, Ana M., additional, Marks, Kevin, additional, Baselga, José, additional, Tabernero, Josep, additional, Nuciforo, Paolo, additional, Manning, Brendan D., additional, Marjon, Katya, additional, and Carracedo, Arkaitz, additional
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- 2018
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18. Structure and function study of the complex that synthesizesS-adenosylmethionine
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Murray, Ben, primary, Antonyuk, Svetlana V., additional, Marina, Alberto, additional, Van Liempd, Sebastiaan M., additional, Lu, Shelly C., additional, Mato, Jose M., additional, Hasnain, S. Samar, additional, and Rojas, Adriana L., additional
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- 2014
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19. Metabolic Profiling of Endocrine-Disrupting Compounds by On-Line Cytochrome P450 Bioreaction Coupled to On-Line Receptor Affinity Screening
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Van Liempd, Sebastiaan M., primary, Kool, Jeroen, additional, Meerman, John H., additional, Irth, Hubertus, additional, and Vermeulen, Nico P., additional
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- 2007
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20. Online Biochemical Detection of Glutathione-S-Transferase P1-Specific Inhibitors in Complex Mixtures
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Kool, Jeroen, primary, Eggink, Mark, additional, Van Rossum, Huub, additional, Van Liempd, Sebastiaan M., additional, Van Elswijk, Danny A., additional, Irth, Hubertus, additional, Commandeur, Jan N.M., additional, Meerman, John H.N., additional, and Vermeulen, Nico P.E., additional
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- 2007
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21. Development of Three Parallel Cytochrome P450 Enzyme Affinity Detection Systems Coupled On-line to Gradient High-Performance Liquid Chromatography
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Kool, Jeroen, primary, van Liempd, Sebastiaan M., additional, van Rossum, Huub, additional, van Elswijk, Danny A., additional, Irth, Hubertus, additional, Commandeur, Jan N. M., additional, and Vermeulen, Nico P. E., additional
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- 2007
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22. Rapid On-line Profiling of Estrogen Receptor Binding Metabolites of Tamoxifen
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Kool, Jeroen, primary, Ramautar, Rawi, additional, van Liempd, Sebastiaan M., additional, Beckman, Joran, additional, de Kanter, Frans J. J., additional, Meerman, John H. N., additional, Schenk, Tim, additional, Irth, Hubertus, additional, Commandeur, Jan N. M., additional, and Vermeulen, Nico P. E., additional
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- 2006
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23. Development of a Novel Cytochrome P450 Bioaffinity Detection System Coupled Online to Gradient Reversed-Phase High-Performance Liquid Chromatography
- Author
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Kool, Jeroen, primary, van Liempd, Sebastiaan M., additional, Ramautar, Rawi, additional, Schenk, Tim, additional, Meerman, John H.N., additional, Irth, Hubertus, additional, Commandeur, Jan. N.M., additional, and Vermeulen, Nico P.E., additional
- Published
- 2005
- Full Text
- View/download PDF
24. Role of aramchol in steatohepatitis and fibrosis in mice
- Author
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Iruarrizaga‐Lejarreta, Marta, Varela‐Rey, Marta, Fernández‐Ramos, David, Martínez‐Arranz, Ibon, Delgado, Teresa C, Simon, Jorge, Gutiérrez‐de Juan, Virginia, delaCruz‐Villar, Laura, Azkargorta, Mikel, Lavin, José L., Mayo, Rebeca, Van Liempd, Sebastiaan M., Aurrekoetxea, Igor, Buqué, Xabier, Delle Cave, Donatella, Peña, Arantza, Rodríguez‐Cuesta, Juan, Aransay, Ana M., Elortza, Félix, Falcón‐Pérez, Juan Manuel, Aspichueta, Patricia, Hayardeny, Liat, Noureddin, Mazen, Sanyal, Arun, Alonso, Cristina, Anguita, Juan, Martínez‐Chantar, María Luz, Lu, Shelly C., and Mato, José M.
- Subjects
nutritional and metabolic diseases ,3. Good health - Abstract
Nonalcoholic steatohepatitis (NASH) is the advanced form of nonalcoholic fatty liver disease (NAFLD) that sets the stage for further liver damage. The mechanism for the progression of NASH involves multiple parallel hits, including oxidative stress, mitochondrial dysfunction, inflammation, and others. Manipulation of any of these pathways may be an approach to prevent NASH development and progression. Arachidyl‐amido cholanoic acid (Aramchol) is presently in a phase IIb NASH study. The aim of the present study was to investigate Aramchol's mechanism of action and its effect on fibrosis using the methionine‐ and choline‐deficient (MCD) diet model of NASH. We collected liver and serum from mice fed an MCD diet containing 0.1% methionine (0.1MCD) for 4 weeks; these mice developed steatohepatitis and fibrosis. We also collected liver and serum from mice receiving a control diet, and metabolomes and proteomes were determined for both groups. The 0.1MCD‐fed mice were given Aramchol (5 mg/kg/day for the last 2 weeks), and liver samples were analyzed histologically. Aramchol administration reduced features of steatohepatitis and fibrosis in 0.1MCD‐fed mice. Aramchol down‐regulated stearoyl‐coenyzme A desaturase 1, a key enzyme involved in triglyceride biosynthesis and the loss of which enhances fatty acid β‐oxidation. Aramchol increased the flux through the transsulfuration pathway, leading to a rise in glutathione (GSH) and the GSH/oxidized GSH ratio, the main cellular antioxidant that maintains intracellular redox status. Comparison of the serum metabolomic pattern between 0.1MCD‐fed mice and patients with NAFLD showed a substantial overlap.Conclusion: Aramchol treatment improved steatohepatitis and fibrosis by 1) decreasing stearoyl‐coenyzme A desaturase 1 and 2) increasing the flux through the transsulfuration pathway maintaining cellular redox homeostasis. We also demonstrated that the 0.1MCD model resembles the metabolic phenotype observed in about 50% of patients with NAFLD, which supports the potential use of Aramchol in NASH treatment.
25. Role of aramchol in steatohepatitis and fibrosis in mice
- Author
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Iruarrizaga‐Lejarreta, Marta, Varela‐Rey, Marta, Fernández‐Ramos, David, Martínez‐Arranz, Ibon, Delgado, Teresa C, Simon, Jorge, Gutiérrez‐de Juan, Virginia, delaCruz‐Villar, Laura, Azkargorta, Mikel, Lavin, José L., Mayo, Rebeca, Van Liempd, Sebastiaan M., Aurrekoetxea, Igor, Buqué, Xabier, Delle Cave, Donatella, Peña, Arantza, Rodríguez‐Cuesta, Juan, Aransay, Ana M., Elortza, Félix, Falcón‐Pérez, Juan Manuel, Aspichueta, Patricia, Hayardeny, Liat, Noureddin, Mazen, Sanyal, Arun, Alonso, Cristina, Anguita, Juan, Martínez‐Chantar, María Luz, Lu, Shelly C., and Mato, José M.
- Subjects
nutritional and metabolic diseases ,3. Good health - Abstract
Nonalcoholic steatohepatitis (NASH) is the advanced form of nonalcoholic fatty liver disease (NAFLD) that sets the stage for further liver damage. The mechanism for the progression of NASH involves multiple parallel hits, including oxidative stress, mitochondrial dysfunction, inflammation, and others. Manipulation of any of these pathways may be an approach to prevent NASH development and progression. Arachidyl‐amido cholanoic acid (Aramchol) is presently in a phase IIb NASH study. The aim of the present study was to investigate Aramchol's mechanism of action and its effect on fibrosis using the methionine‐ and choline‐deficient (MCD) diet model of NASH. We collected liver and serum from mice fed an MCD diet containing 0.1% methionine (0.1MCD) for 4 weeks; these mice developed steatohepatitis and fibrosis. We also collected liver and serum from mice receiving a control diet, and metabolomes and proteomes were determined for both groups. The 0.1MCD‐fed mice were given Aramchol (5 mg/kg/day for the last 2 weeks), and liver samples were analyzed histologically. Aramchol administration reduced features of steatohepatitis and fibrosis in 0.1MCD‐fed mice. Aramchol down‐regulated stearoyl‐coenyzme A desaturase 1, a key enzyme involved in triglyceride biosynthesis and the loss of which enhances fatty acid β‐oxidation. Aramchol increased the flux through the transsulfuration pathway, leading to a rise in glutathione (GSH) and the GSH/oxidized GSH ratio, the main cellular antioxidant that maintains intracellular redox status. Comparison of the serum metabolomic pattern between 0.1MCD‐fed mice and patients with NAFLD showed a substantial overlap. Conclusion: Aramchol treatment improved steatohepatitis and fibrosis by 1) decreasing stearoyl‐coenyzme A desaturase 1 and 2) increasing the flux through the transsulfuration pathway maintaining cellular redox homeostasis. We also demonstrated that the 0.1MCD model resembles the metabolic phenotype observed in about 50% of patients with NAFLD, which supports the potential use of Aramchol in NASH treatment.
26. Ammonium nutrition interacts with iron homeostasis in Brachypodium distachyon.
- Author
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De la Peña M, Marín-Peña AJ, Urmeneta L, Coleto I, Castillo-González J, van Liempd SM, Falcón-Pérez JM, Álvarez-Fernández A, González-Moro MB, and Marino D
- Subjects
- Homeostasis, Iron, Plant Roots, Ammonium Compounds, Brachypodium, Iron Deficiencies
- Abstract
Most plant species develop stress symptoms when exposed to high ammonium (NH4+) concentrations. The root is the first organ in contact with high NH4+ and therefore the first barrier to cope with ammonium stress. In this work, we focused on root adaptation to ammonium nutrition in the model plant Brachypodium distachyon. Proteome analysis revealed changes associated with primary metabolism, cell wall remodelling, and redox homeostasis. In addition, it showed a strong induction of proteins related to methionine (Met) metabolism and phytosiderophore (PS) synthesis in ammonium-fed plants. In agreement with this, we show how ammonium nutrition impacts Met/S-adenosyl-Met and PS metabolic pathways together with increasing root iron content. Nevertheless, ammonium-fed plants displayed higher sensitivity to iron deficiency, suggesting that ammonium nutrition triggers impaired iron utilization and root to shoot transport, which entailed an induction in iron-related responses. Overall, this work demonstrates the importance of iron homeostasis during ammonium nutrition and paves a new way to better understand and improve ammonium use efficiency and tolerance., (© The Author(s) 2021. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.)
- Published
- 2022
- Full Text
- View/download PDF
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