222 results on '"Whoriskey, Frederick"'
Search Results
2. Tracking oceanic fishes
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Furey, Nathan B., primary, Iverson, Sara J., additional, Cooke, Steven J., additional, Hinch, Scott G., additional, and Whoriskey, Frederick G., additional
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- 2023
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3. Reliable growth estimation from mark–recapture tagging data in elasmobranchs
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Dureuil, Manuel, Aeberhard, William H., Dowd, Michael, Pardo, Sebastián A., Whoriskey, Frederick G., and Worm, Boris
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- 2022
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4. A Hidden Markov Movement Model for rapidly identifying behavioral states from animal tracks
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Whoriskey, Kim, Auger-Méthé, Marie, Albertsen, Christoffer Moesgaard, Whoriskey, Frederick G., Binder, Thomas R., Krueger, Charles C., and Flemming, Joanna Mills
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Quantitative Biology - Quantitative Methods - Abstract
1. Electronic telemetry is frequently used to document animal movement through time. Methods that can identify underlying behaviors driving specific movement patterns can help us understand how and why animals use available space, thereby aiding conservation and management efforts. For aquatic animal tracking data with significant measurement error, a Bayesian state-space model called the first-Difference Correlated Random Walk with Switching (DCRWS) has often been used for this purpose. However, for aquatic animals, highly accurate tracking data of animal movement are now becoming more common. 2. We developed a new Hidden Markov Model (HMM) for identifying behavioral states from animal tracks with negligible error, which we called the Hidden Markov Movement Model (HMMM). We implemented as the basis for the HMMM the process equation of the DCRWS, but we used the method of maximum likelihood and the R package TMB for rapid model fitting. 3. We compared the HMMM to a modified version of the DCRWS for highly accurate tracks, the DCRWSnome, and to a common HMM for animal tracks fitted with the R package moveHMM. We show that the HMMM is both accurate and suitable for multiple species by fitting it to real tracks from a grey seal, lake trout, and blue shark, as well as to simulated data. 4. The HMMM is a fast and reliable tool for making meaningful inference from animal movement data that is ideally suited for ecologists who want to use the popular DCRWS implementation for highly accurate tracking data. It additionally provides a groundwork for development of more complex modelling of animal movement with TMB. To facilitate its uptake, we make it available through the R package swim., Comment: 30 pages, 4 figures
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- 2016
5. Globally coordinated acoustic aquatic animal tracking reveals unexpected, ecologically important movements across oceans, lakes and rivers
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Lennox, Robert J., Whoriskey, Frederick G., Verhelst, Pieterjan, Vandergoot, Christopher S., Soria, Marc, Reubens, Jan, Rechisky, Erin L., Power, Michael, Murray, Taryn, Mulder, Ingeborg, Markham, James L., Lowerre‐barbieri, Susan K., Lindley, Steven T., Knott, Nathan A., Kessel, Steven T., Iverson, Sara, Huveneers, Charlie, Heidemeyer, Maike, Harcourt, Robert, Griffin, Lucas P., Friess, Claudia, Filous, Alexander, Fetterplace, Lachlan C., Danylchuk, Andy J., Daly, Ryan, Cowley, Paul, Cooke, Steven J., Chávez, Elpis J., Blaison, Antonin, Whoriskey, Kim, Lennox, Robert J., Whoriskey, Frederick G., Verhelst, Pieterjan, Vandergoot, Christopher S., Soria, Marc, Reubens, Jan, Rechisky, Erin L., Power, Michael, Murray, Taryn, Mulder, Ingeborg, Markham, James L., Lowerre‐barbieri, Susan K., Lindley, Steven T., Knott, Nathan A., Kessel, Steven T., Iverson, Sara, Huveneers, Charlie, Heidemeyer, Maike, Harcourt, Robert, Griffin, Lucas P., Friess, Claudia, Filous, Alexander, Fetterplace, Lachlan C., Danylchuk, Andy J., Daly, Ryan, Cowley, Paul, Cooke, Steven J., Chávez, Elpis J., Blaison, Antonin, and Whoriskey, Kim
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Acoustic telemetry is a popular approach used to track many different aquatic animal taxa in marine and freshwater systems. However, information derived from focal studies is typically resource‐ and geography‐limited by the extent and placement of acoustic receivers. Even so, animals tagged and tracked in one region or study may be detected unexpectedly at distant locations by other researchers using compatible equipment, who ideally share that information. Synergies through national and global acoustic tracking networks are facilitating significant discoveries and unexpected observations that yield novel insight into the movement ecology and habitat use of wild animals. Here, we present a selection of case studies that highlight unexpected tracking observations or absence of observations where we expected to find animals in aquatic systems around the globe. These examples span freshwater and marine systems across spatiotemporal scales ranging from adjacent watersheds to distant ocean regions. These unexpected movements showcase the power of collaborative telemetry networks and serendipitous observations. Unique and unexpected observations such as those presented here can capture the imagination of both researchers and members of the public, and improve understanding of movement and connectivity within aquatic ecosystems.
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- 2024
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6. Microbial diversity of the glass sponge Vazella pourtalesii in response to anthropogenic activities
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Busch, Kathrin, Beazley, Lindsay, Kenchington, Ellen, Whoriskey, Frederick, Slaby, Beate M., and Hentschel, Ute
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- 2020
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7. Marine habitat use and feeding ecology of introduced anadromous brown trout at the colonization front of the sub-Antarctic Kerguelen archipelago
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Davidsen, Jan Grimsrud, Bordeleau, Xavier, Eldøy, Sindre Håvarstein, Whoriskey, Frederick, Power, Michael, Crossin, Glenn T., Buhariwalla, Colin, and Gaudin, Philippe
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- 2021
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8. Globally coordinated acoustic aquatic animal tracking reveals unexpected, ecologically important movements across oceans, lakes and rivers
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Lennox, Robert J., primary, Whoriskey, Frederick G., additional, Verhelst, Pieterjan, additional, Vandergoot, Christopher S., additional, Soria, Marc, additional, Reubens, Jan, additional, Rechisky, Erin L., additional, Power, Michael, additional, Murray, Taryn, additional, Mulder, Ingeborg, additional, Markham, James L., additional, Lowerre‐Barbieri, Susan K., additional, Lindley, Steven T., additional, Knott, Nathan A., additional, Kessel, Steven T., additional, Iverson, Sara, additional, Huveneers, Charlie, additional, Heidemeyer, Maike, additional, Harcourt, Robert, additional, Griffin, Lucas P., additional, Friess, Claudia, additional, Filous, Alexander, additional, Fetterplace, Lachlan C., additional, Danylchuk, Andy J., additional, Daly, Ryan, additional, Cowley, Paul, additional, Cooke, Steven J., additional, Chávez, Elpis J., additional, Blaison, Antonin, additional, and Whoriskey, Kim, additional
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- 2023
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9. Migration patterns and navigation cues of Atlantic salmon post‐smolts migrating from 12 rivers through the coastal zones around the Irish Sea
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Lilly, Jessie, primary, Honkanen, Hannele H., additional, Rodger, Jessica R., additional, del Villar, Diego, additional, Boylan, Patrick, additional, Green, Amy, additional, Pereiro, Diego, additional, Wilkie, Lorna, additional, Kennedy, Richard, additional, Barkley, Andrea, additional, Rosell, Robert, additional, Ó. Maoiléidigh, Niall, additional, O'Neill, Ross, additional, Waters, Catherine, additional, Cotter, Deirdre, additional, Bailey, David, additional, Roche, William, additional, McGill, Ross, additional, Barry, James, additional, Beck, Samantha V., additional, Henderson, Jim, additional, Parke, Debbie, additional, Whoriskey, Frederick G., additional, Shields, Brian, additional, Ramsden, Philip, additional, Walton, Silas, additional, Fletcher, Melanie, additional, Whelan, Ken, additional, Bean, Colin W., additional, Elliott, Sophie, additional, Bowman, Adrian, additional, and Adams, Colin E., additional
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- 2023
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10. Biologging in combination with biotelemetry reveals behavior of Atlantic salmon following exposure to capture and handling stressors
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Lennox, Robert J., Chapman, Jacqueline M., Twardek, William M., Broell, Franziska, Boe, Kristin, Whoriskey, Frederick G., Fleming, Ian A., Robertson, Martha, and Cooke, Steven J.
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Fishes -- Analysis ,Salmon -- Analysis ,Earth sciences - Abstract
We investigated the response of Atlantic salmon (Salmo salar) to capture and handling stressors by analyzing fine-scale locomotor activity using accelerometer data loggers and broader-scale movements by tracking migration with radiotelemetry. Half the sample population was exposed to experimental exercise and air exposure and released with a control group to simulate fisheries handling. All but two of the surviving fish (both in the treatment group) returned to the counting fence to resume the 2016 spawning migration (survival = 86%-91%). There were no differences in postrelease locomotor activity, measured by an index of total body action (jerk), between control and treatment salmon (p = 0.81). Comparison of mean time to return to the counting fence against a null model revealed that treatment salmon were significantly delayed in returning to the counting fence (p < 0.01), whereas control fish were not (p = 0.24). Both the abiotic environment and human interactions influenced locomotor activity of the migratory fish and synchrony of the migration with untreated conspecifics. Nous avons etudie la reaction des saumons atlantiques (Salmo salar) a des stresseurs associes a la capture et a la manipulation par l'analyse de l'activite locomotrice fine en utilisant des enregistreurs de donnees d'accelerometre et des deplacements a plus grande echelle en suivant la migration par radiotelemetrie. La moitie de la population etudiee a ete exposee a l'exercice experimental et a l'air et relachee avec un groupe temoin afin de simuler la manipulation associee a la peche. Tous les poissons ayant survecu sauf deux (tous deux dans le groupe traite) sont retournes a la barriere de denombrement pour reprendre la migration de frai de 2016 (taux de survie = 86 %-91 %). Il n'y avait pas de difference sur le plan de l'activite locomotrice apres le lacher, mesuree par un indice de l'action corporelle totale (saccade), entre les saumons temoins et les saumons traites (p = 0,81). La comparaison du temps moyen avant le retour a un modele nul revele que le retour des saumons traites a la barriere de denombrement etait significativement retarde (p < 0,01), alors que celui des poissons temoins de l'etait pas (p = 0,24). Le milieu abiotique et les interactions avec les humains ont tous deux influence l'activite locomotrice des poissons migrateurs et la synchronisation de la migration avec celle de conspecifiques non traites., Introduction Migration is a large-scale (relative to the size of a given animal) synchronized movement of animals across a landscape between habitats, which allows them to optimize lifetime reproductive potential [...]
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- 2019
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11. The Ocean Tracking Network: Advancing frontiers in aquatic science and management
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Iverson, Sara J., Fisk, Aaron T., Hinch, Scott G., Flemming, Joanna Mills, Cooke, Steven J., and Whoriskey, Frederick G.
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Canada. Natural Sciences and Engineering Research Council -- Training -- Cultural policy -- Management ,Sustainable development ,International cooperation ,Indigenous peoples -- Training ,Ocean ,Company business management ,Earth sciences ,Dalhousie University -- Training -- Management - Abstract
Aquatic animals are integral to ocean and freshwater ecosystems and their resilience, are depended upon globally for food sustainability, and support coastal communities and Indigenous peoples. However, global aquatic environments are changing profoundly due to anthropogenic actions and environmental change. These changes are altering distributions, movements, and survival of aquatic animals in ways that are not well understood. The Ocean Tracking Network (OTN) is a global partnership that is filling this knowledge gap. OTN Canada, a pan-Canadian (and beyond) research network, was launched in 2010 with visionary funding by the Canadian government. In our introduction to this special issue, we briefly overview how this interdisciplinary network has used state-of-the-art technologies, infrastructure, electronic tags and sensors, and associated cutting-edge research and training programs to better understand changing marine and freshwater dynamics and their impact on ecosystems, resources, and animal ecology. These studies have provided unprecedented insights into animal ecology and resource management at a range of spatial and temporal scales and by interfacing animal movements with novel measures of environment, physiology, disease, genetics-genomics, and anthropogenic stressors. Les animaux aquatiques sont des elements essentiels des ecosystemes oceaniques et d'eau douce et de la resilience de ces systemes, ils assurent la perennite de la disponibilite de nourriture a l'echelle planetaire et supportent des collectivites cotieres et des peuples autochtones. Les milieux aquatiques planetaires font toutefois l'objet de modifications profondes causees par l'activite humaine et des changements environnementaux. L'incidence de ces modifications sur la repartition, les deplacements et la survie des animaux aquatiques n'est pas bien comprise. L'Ocean Tracking Network (OTN) est un partenariat international qui vise a combler ces lacunes dans les connaissances. OTN Canada, un reseau de recherche pancanadien (et au-dela) a ete lance en 2010 grace au financement visionnaire du gouvernement du Canada. Dans notre introduction au present numero special virtuel, nous presentons un bref survol de l'emploi fait par ce reseau interdisciplinaire des plus recentes technologies, infrastructures, des etiquettes et capteurs electroniques et de la recherche et des programmes de formation de pointe associes pour mieux comprendre la dynamique changeante des milieux marins et d'eau douce et son incidence sur les ecosystemes, les ressources et l'ecologie animale. Ces etudes jettent un eclairage sans precedent sur l'ecologie animale et la gestion des ressources a differentes echelles spatiales et temporelles, en reliant les deplacements d'animaux a de nouvelles mesures du milieu, de la physiologie, des maladies, de la genetique-genomique et de facteurs de stress d'origine humaine., Introduction Aquatic animals help meet global food needs, annually contribute billions of dollars in socioeconomic benefits and ecosystem services to society, support coastal communities, and are culturally important, particularly for [...]
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- 2019
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12. Characterizing snow crab (Chionoecetes opilio) movements in the Sydney Bight (Nova Scotia, Canada): a collaborative approach using multiscale acoustic telemetry
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Cote, David, Nicolas, Jean-Marc, Whoriskey, Frederick, Cook, Adam. M., Broome, Jeremy, Regular, Paul M., and Baker, Darrin
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Brachyura -- Distribution ,Fishery research ,Oceans ,Women ,Hostages ,Company distribution practices ,Earth sciences - Abstract
Like many deeper ocean species, the fine-scale movement ecology of snow crab is not well understood. We integrated fine-scale positioning telemetry with larger-scale position estimates from autonomous mobile surveys and harvester returns to evaluate movements of male and female snow crab (Chionoecetes opilio). Effects of life stage-sex, temperature, and diel and tidal cycles on movement velocity were observed, with a tendency for increased velocities during the night, slack tide, and at increasing water temperatures. Males also moved faster than females and juveniles. The strength of these statistical relationships, however, was weak ([R.sup.2] = 7.2%). The movement direction also did not vary over the tidal cycle. The maximum distance moved for adult males was an order of magnitude higher (37.1 km) than for females (3.6 km) and juvenile males (3.9 km), but median distances were more similar across groups. Individuals, once released, tended to disperse and move toward slope habitats. Little evidence of site fidelity was apparent. The absence of strong environmental influences on movements likely reflected the behavioural plasticity of snow crab and the relative environmental stability of offshore environments.A l'instar de celle de nombreuses especes oceaniques d'eau profonde, l'ecologie des deplacements a petite echelle du crabe des neiges n'est pas bien comprise. Nous avons combine des donnees de telemetrie de positionnement a echelle fine a des estimations de l'emplacement a plus grande echelle tirees de releves mobiles autonomes et de debarquements de pecheurs pour evaluer les deplacements de crabes des neiges (Chionoecetes opilio) males et femelles. Des effets de la combinaison du sexe et de l'etape du cycle biologique, de la temperature et des cycles nycthemeraux et tidaux sur la vitesse de deplacement ont ete observes, dont une tendance vers des vitesses plus grandes durant la nuit et l'etale et a de plus hautes temperatures de l'eau. Les males se deplacaient aussi plus rapidement que les femelles et les juveniles. Ces relations statistiques sont toutefois faibles (R2 = 7,2 %). En outre, la direction des deplacements ne variait pas durant le cycle de maree. La distance de deplacement maximum pour les males adultes etait un ordre de grandeur plus elevee (37,1 km) que celle des femelles (3,6 km) et des males juveniles (3,9 km), les distances medianes des trois groupes etant cependant plus semblables. Une fois relaches, les individus avaient tendance a se disperser et se deplacer vers des habitats de pente. Peu d'indices de fidelite au site ont ete notes. L'absence d'influences environnementales fortes sur les deplacements reflete vraisemblablement la plasticite comportementale des crabes des neiges et la relative stabilite environnementale des milieux extracotiers. [Traduit par la Redaction], IntroductionEcological and behavioural traits of most marine species are not well understood, including for many heavily managed, commercially important fisheries stocks. Often, fundamental research to understand a species' full life [...]
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- 2019
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13. Corrigendum : Envisioning the Future of Aquatic Animal Tracking: Technology, Science, and Application
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LENNOX, ROBERT J., AARESTRUP, KIM, COOKE, STEVEN J., COWLEY, PAUL D., DENG, ZHIQUN D., FISK, AARON T., HARCOURT, ROBERT G., HEUPEL, MICHELLE, HINCH, SCOTT G., HOLLAND, KIM N., HUSSEY, NIGEL E., IVERSON, SARA J., KESSEL, STEVEN T., KOCIK, JOHN F., LUCAS, MARTYN C., FLEMMING, JOANNA MILLS, NGUYEN, VIVIAN M., STOKESBURY, MICHAEL J.W., VAGLE, SVEIN, VANDERZWAAG, DAVID L., WHORISKEY, FREDERICK G., and YOUNG, NATHAN
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- 2017
14. Envisioning the Future of Aquatic Animal Tracking : Technology, Science, and Application
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LENNOX, ROBERT J., AARESTRUP, KIM, COOKE, STEVEN J., COWLEY, PAUL D., DENG, ZHIQUN D., FISK, AARON T., HARCOURT, ROBERT G., HEUPEL, MICHELLE, HINCH, SCOTT G., HOLLAND, KIM N., HUSSEY, NIGEL E., IVERSON, SARA J., KESSEL, STEVEN T., KOCIK, JOHN F., LUCAS, MARTYN C., FLEMMING, JOANNA MILLS, NGUYEN, VIVIAN M., STOKESBURY, MICHAEL J.W., VAGLE, SVEIN, VANDERZWAAG, DAVID L., WHORISKEY, FREDERICK G., and YOUNG, NATHAN
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- 2017
15. The effect of environmental conditions on Atlantic salmon smolts’ (Salmo salar) bioenergetic requirements and migration through an inland sea
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Strople, Leah C., Filgueira, Ramón, Hatcher, Bruce G., Denny, Shelley, Bordeleau, Xavier, Whoriskey, Frederick G., and Crossin, Glenn T.
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- 2018
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16. Prospects for the future of pink salmon in three oceans: From the native Pacific to the novel Arctic and Atlantic
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Lennox, Robert J., primary, Berntsen, Henrik H., additional, Garseth, Åse Helen, additional, Hinch, Scott G., additional, Hindar, Kjetil, additional, Ugedal, Ola, additional, Utne, Kjell R., additional, Vollset, Knut Wiik, additional, Whoriskey, Frederick G., additional, and Thorstad, Eva B., additional
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- 2023
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17. To share or not to share in the emerging era of big data: perspectives from fish telemetry researchers on data sharing
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Nguyen, Vivian M., Brooks, Jill L., Young, Nathan, Lennox, Robert J., Haddaway, Neal, Whoriskey, Frederick G., Harcourt, Robert, and Cooke, Steven J.
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Big data -- Usage ,Information management -- Methods ,Telemetry -- Information management ,Company systems management ,Information accessibility ,Earth sciences - Abstract
The potential for telemetry data to answer complex questions about aquatic animals and their interactions with the environment is limited by the capacity to store, manage, and access data across the research community. Large telemetry networks and databases exist, but are limited by the actions of researchers to share their telemetry data. Promoting data sharing and understanding researchers' views on open practices is a major step toward enhancing the role of big data in ecology and resources management. We surveyed 307 fish telemetry researchers to understand their perspectives and experiences on data sharing. A logistic regression revealed that data sharing was positively related to researchers with collaborative tendencies, who belong to a telemetry network, who are prolific publishers, and who express altruistic motives for their research. Researchers were less likely to have shared telemetry data if they engage in radio and (or) acoustic telemetry, work for regional government, and value the time it takes to complete a research project. We identify and provide examples of both benefits and concerns that respondents have about sharing telemetry data. Le potentiel que presentent les donnees de telemetrie pour repondre a des questions complexes sur les animaux aquatiques et leurs interactions avec le milieu est limite par la capacite de stocker et de gerer les donnees et de les rendre accessibles a l'ensemble des chercheurs. De grands reseaux et ensembles de donnees de telemetrie existent, mais ils sont limites par les mesures que prennent les chercheurs pour partager leurs donnees. La promotion du partage de donnees et la comprehension des perspectives des chercheurs sur les pratiques ouvertes constituent un pas important vers l'accroissement du role des donnees massives en ecologie et en gestion des ressources. Nous avons sonde 307 chercheurs qui utilisent la telemetrie pour etudier les poissons afin de comprendre leurs points de vue et experiences en matiere de partage de donnees. Une regression logistique revele que le partage de donnees est positivement relie aux chercheurs ayant tendance a collaborer, qui font partie d'un reseau de telemetrie, qui publient abondamment et qui mentionnent des raisons altruistes motivant leurs travaux. Les chercheurs sont moins susceptibles d'avoir partage des donnees de telemetrie s'ils font de la radiotelemetrie ou de la telemetrie acoustique, travaillent pour un gouvernement regional et accordent de la valeur au temps necessaire pour realiser un projet de recherche. Nous avons cerne des avantages et preoccupations souleves par les repondants concernant le partage de donnees de telemetrie et en presentons des exemples. [Traduit par la Redaction], Introduction Telemetry is an extraordinary tool for monitoring animal movement in the wild, with applications in the aquatic, aerial, and terrestrial realms (Cooke et al. 2004; Hussey et al. 2015; [...]
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- 2017
18. Prospects for the future of pink salmon in three oceans: From the native Pacific to the novel Arctic and Atlantic
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Lennox, Robert, Berntsen, Johan Henrik Hårdensson, Garseth, Åse Helen, Hinch, Scott G., Hindar, Kjetil, Ugedal, Ola, Utne, Kjell Rong, Vollset, Knut Wiik, Whoriskey, Frederick G., and Thorstad, Eva Bonsak
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Pacific Ocean ,regime shift ,VDP::Zoologiske og botaniske fag: 480 ,biological invasions ,Zoology and botany: 480 [VDP] ,VDP::Zoology and botany: 480 ,climate adaptation ,Atlantification ,Zoologiske og botaniske fag: 480 [VDP] - Abstract
While populations of other migratory salmonids suffer in the Anthropocene, pink salmon (Oncorhynchus gorbusca Salmonidae) are thriving, and their distribution is expanding both within their natural range and in the Atlantic and Arctic following introduction of the species to the White Sea in the 1950s. Pink salmon are now rapidly spreading in Europe and even across the ocean to North America. Large numbers of pink salmon breed in Norwegian rivers and small numbers of individuals have been captured throughout the North Atlantic since 2017. Although little is known about the biology and ecology of the pink salmon in its novel distribution, the impacts of the species' introduction are potentially highly significant for native species and watershed productivity. Contrasts between pink salmon in the native and extended ranges will be key to navigating management strategies for Atlantic nations where the pink salmon is entrenching itself among the fish fauna, posing potential threats to native fish communities. One key conclusion of this paper is that the species' heritable traits are rapidly selected and drive local adaptation and evolution. Within the Atlantic region, this may facilitate further establishment and spread. The invasion of pink salmon in the Atlantic basin is ultimately a massive ecological experiment and one of the first examples of a major faunal change in the North Atlantic Ocean that is already undergoing rapid changes due to other anthropogenic stressors. New research is urgently needed to understand the role and potential future impacts of pink salmon in Atlantic ecosystems. Atlantification, biological invasions, climate adaptation, Pacific Ocean, regime shift
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- 2023
19. Systematic differences in eye numbers between the left and right valves of the sea scallop Placopecten magellanicus: an evolutionary response for visualizing the water column?
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Whoriskey, Kim, Whoriskey, Sophie, and Whoriskey, Frederick G.
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Animal populations -- Distribution ,Scallops -- Distribution ,Company distribution practices ,Biological sciences ,Zoology and wildlife conservation - Abstract
ABSTRACT Eye numbers were quantified on the mantles of sea scallops (Placopecten magellanicus) to determine whether they varied with scallop size (correlated with age), and to compare the numbers of [...]
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- 2014
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20. The quest for successful Atlantic salmon restoration: perspectives, priorities, and maxims
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Lennox, Robert J, primary, Alexandre, Carlos M, additional, Almeida, Pedro R, additional, Bailey, Kevin M, additional, Barlaup, Bjørn T, additional, Bøe, Kristin, additional, Breukelaar, André, additional, Erkinaro, Jaakko, additional, Forseth, Torbjørn, additional, Gabrielsen, Sven-Erik, additional, Halfyard, Edmund, additional, Hanssen, Erlend M, additional, Karlsson, Sten, additional, Koch, Stephanie, additional, Koed, Anders, additional, Langåker, Roy M, additional, Lo, Håvard, additional, Lucas, Martyn C, additional, Mahlum, Shad, additional, Perrier, Charles, additional, Pulg, Ulrich, additional, Sheehan, Timothy, additional, Skoglund, Helge, additional, Svenning, Martin, additional, Thorstad, Eva B, additional, Velle, Gaute, additional, Whoriskey, Frederick G, additional, and Vollset, Knut Wiik, additional
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- 2021
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21. Animal Borne Ocean Sensors – AniBOS – An Essential Component of the Global Ocean Observing System
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McMahon, Clive R., primary, Roquet, Fabien, additional, Baudel, Sophie, additional, Belbeoch, Mathieu, additional, Bestley, Sophie, additional, Blight, Clint, additional, Boehme, Lars, additional, Carse, Fiona, additional, Costa, Daniel P., additional, Fedak, Michael A., additional, Guinet, Christophe, additional, Harcourt, Robert, additional, Heslop, Emma, additional, Hindell, Mark A., additional, Hoenner, Xavier, additional, Holland, Kim, additional, Holland, Mellinda, additional, Jaine, Fabrice R. A., additional, Jeanniard du Dot, Tiphaine, additional, Jonsen, Ian, additional, Keates, Theresa R., additional, Kovacs, Kit M., additional, Labrousse, Sara, additional, Lovell, Philip, additional, Lydersen, Christian, additional, March, David, additional, Mazloff, Matthew, additional, McKinzie, Megan K., additional, Muelbert, Mônica M. C., additional, O’Brien, Kevin, additional, Phillips, Lachlan, additional, Portela, Esther, additional, Pye, Jonathan, additional, Rintoul, Stephen, additional, Sato, Katsufumi, additional, Sequeira, Ana M. M., additional, Simmons, Samantha E., additional, Tsontos, Vardis M., additional, Turpin, Victor, additional, van Wijk, Esmee, additional, Vo, Danny, additional, Wege, Mia, additional, Whoriskey, Frederick Gilbert, additional, Wilson, Kenady, additional, and Woodward, Bill, additional
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- 2021
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22. Maximizing Benefits From Punctual Ocean Infrastructure: An Ethical Perspective
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Whoriskey, Frederick, primary, Barbier, Michele, additional, Mazur, Mackenzie, additional, Hahn, Tobias, additional, Kritzer, Jacob, additional, and Vallee, Richard, additional
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- 2021
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23. Correlates of estuarine survival of Atlantic salmon postsmolts from the Southern Upland, Nova Scotia, Canada
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Halfyard, Edmund A., Gibson, A. Jamie F., Stokesbury, Michael J.W., Ruzzante, Daniel E., and Whoriskey, Frederick G.
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Nova Scotia -- Environmental aspects ,Atlantic salmon -- Environmental aspects -- Behavior -- Distribution ,Estuaries -- Environmental aspects -- Behavior -- Distribution ,Animal behavior -- Research ,Fish populations -- Environmental aspects -- Behavior -- Distribution ,Company distribution practices ,Earth sciences - Abstract
Acoustic telemetry is a useful tool to monitor the estuarine survival and behaviour of Atlantic salmon postsmolts. Most frequently, survival is reported as the static fraction of tagged postsmolts detected, and while the timing or location of mortality may be reported, covariates of survival or the relationship between migratory behaviour and survival are less often described. In this study, we used acoustic telemetry to follow Atlantic salmon smolts migrating to sea from four rivers in Nova Scotia, Canada. Further, we tested the relationship between migratory behaviour and survival and used mark-recapture models to examine the role of body length and tag-to-body mass as survival covariates. Survival was most heavily impacted in estuarine habitats closest to head-of-tide. Survival was affected by body length at three of four sites. The shape and spatial variability of the body length--survival relationship provided insight on mortality vectors, highlighting the potential roles of predation and osmotic stress. Survival was not influenced by repeated landward-seaward migratory movements; however, there was a significant correlation between residency and survival. La telemetrie acoustique est un outil utile pour la surveillance de la survie et du comportement en estuaire des post-saumoneaux de saumon atlantique. Dans la plupart des cas, le taux de survie signale est la fraction statique de postsaumoneaux marques detectes et, si le moment et le lieu de la mortalite peuvent etre mentionnes, les covariables du taux de survie ou de la relation entre le comportement migratoire et la survie sont moins souvent rapportees. Dans cette l'etude, nous avons fait appel a la telemetrie acoustique pour suivre des saumoneaux de saumon atlantique en migration de la mer vers quatre rivieres de la Nouvelle-Ecosse (Canada). Nous avons en outre verifie le lien entre le comportement migratoire et le taux de survie et utilise des modeles de marquage-recapture pour examiner la longueur du corps et le rapport entre le poids de la marque et celui du corps comme covariables eventuelles du taux de survie. Les impacts sur ce dernier etaient les plus forts dans les habitats estuariens situes les plus pres de la limite de maree. Dans quatre sites, la longueur du corps avait une incidence sur le taux de survie. La forme et la variabilite spatiale de la relation entre la longueur du corps et le taux de survie ont mis en lumiere des vecteurs de mortalite, faisant ressortir un role possible de la predation et du stress osmotique. Si les deplacements migratoires repetes vers la terre ou vers la mer n'avaient pas d'incidence sur le taux de survie, une correlation significative a cependant ete notee entre le temps de residence et le taux de survie. [Traduit par la Redaction], Introduction Atlantic salmon (Salmo salar L.) populations within the southern portion of their North American range have declined dramatically (Parrish et al. 1998; WWF 2001; COSEWIC 2011), due in large [...]
- Published
- 2013
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- View/download PDF
24. Canadian Integrated Ocean Observing System Investigative Evaluations: Observations and Data
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Whoriskey, Frederick, primary, Morton, Kathryn, additional, Bajona, Lenore, additional, Matthew, Beck, additional, Dewey, Richard, additional, Guillemot, Eric, additional, Hurtubise, Jessica, additional, Jenkyns, Reyna, additional, Lapointe, Stéphane, additional, Pirenne, Benoit, additional, Owens, Dwight, additional, Plourde, Arianne, additional, Pye, Jonathan, additional, Ransier, Krista, additional, Sauvé, Germain, additional, Ste-Marie, Anne-Sophie, additional, and Tremblay, Claude, additional
- Published
- 2017
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- View/download PDF
25. Movescapes and eco‐evolutionary movement strategies in marine fish: Assessing a connectivity hotspot
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Lowerre‐Barbieri, Susan K., primary, Friess, Claudia, additional, Griffin, Lucas P., additional, Morley, Danielle, additional, Skomal, Gregory B., additional, Bickford, Joel W., additional, Hammerschlag, Neil, additional, Rider, Mitchell J., additional, Smukall, Matthew J., additional, Zinnicq Bergmann, Maurits P. M., additional, Guttridge, Tristan L., additional, Kroetz, Andrea M., additional, Grubbs, R. Dean, additional, Gervasi, Carissa L., additional, Rehage, Jennifer S., additional, Poulakis, Gregg R., additional, Bassos‐Hull, Kim, additional, Gardiner, Jayne M., additional, Casselberry, Grace A., additional, Young, Joy, additional, Perkinson, Matt, additional, Abercrombie, Debra L., additional, Addis, Dustin T., additional, Block, Barbara A., additional, Acosta, Alejandro, additional, Adams, Aaron J., additional, Danylchuk, Andy J., additional, Cooke, Steven J., additional, Whoriskey, Frederick G., additional, and Brownscombe, Jacob W., additional
- Published
- 2021
- Full Text
- View/download PDF
26. A standardisation framework for bio-logging data to advance ecological research and conservation
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Sequeira, Ana M. M., O'Toole, Malcolm, Keates, Theresa R., McDonnell, Laura H., Braun, Camrin D., Hoenner, Xavier, Jaine, Fabrice R. A., Jonsen, Ian, Newman, Peggy, Pye, Jonathan, Bograd, Steven, Hays, Graeme, Hazen, Elliott L., Holland, Melinda, Tsontos, Vardis, Blight, Clint, Cagnacci, Francesca, Davidson, Sarah C., Dettki, Holger, Duarte, Carlos M., Dunn, Daniel C., Eguíluz, Víctor M., Fedak, Michael, Gleiss, Adrian C., Hammerschlag, Neil, Hindell, Mark, Holland, Kim, Janekovic, Ivica, McKinzie, Megan K., Muelbert, Monica M. C., Pattiaratchi, Charitha, Rutz, Christian, Sims, David W., Simmons, Samantha E., Townsend, Brendal, Whoriskey, Frederick G., Woodward, Bill, Costa, Daniel P., Heupel, Michelle R., McMahon, Clive R., Harcourt, Robert, Weise, Michael, Sequeira, Ana M. M., O'Toole, Malcolm, Keates, Theresa R., McDonnell, Laura H., Braun, Camrin D., Hoenner, Xavier, Jaine, Fabrice R. A., Jonsen, Ian, Newman, Peggy, Pye, Jonathan, Bograd, Steven, Hays, Graeme, Hazen, Elliott L., Holland, Melinda, Tsontos, Vardis, Blight, Clint, Cagnacci, Francesca, Davidson, Sarah C., Dettki, Holger, Duarte, Carlos M., Dunn, Daniel C., Eguíluz, Víctor M., Fedak, Michael, Gleiss, Adrian C., Hammerschlag, Neil, Hindell, Mark, Holland, Kim, Janekovic, Ivica, McKinzie, Megan K., Muelbert, Monica M. C., Pattiaratchi, Charitha, Rutz, Christian, Sims, David W., Simmons, Samantha E., Townsend, Brendal, Whoriskey, Frederick G., Woodward, Bill, Costa, Daniel P., Heupel, Michelle R., McMahon, Clive R., Harcourt, Robert, and Weise, Michael
- Abstract
© The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Sequeira, A. M. M., O'Toole, M., Keates, T. R., McDonnell, L. H., Braun, C. D., Hoenner, X., Jaine, F. R. A., Jonsen, I. D., Newman, P., Pye, J., Bograd, S. J., Hays, G. C., Hazen, E. L., Holland, M., Tsontos, V. M., Blight, C., Cagnacci, F., Davidson, S. C., Dettki, H., Duarte, C. M., Dunn, D. C., Eguiluz, V. M., Fedak, M., Gleiss, A. C., Hammerschlag, N., Hindell, M. A., Holland, K., Janekovic, I., McKinzie, M. K., Muelbert, M. M. C., Pattiaratchi, C., Rutz, C., Sims, D. W., Simmons, S. E., Townsend, B., Whoriskey, F., Woodward, B., Costa, D. P., Heupel, M. R., McMahon, C. R., Harcourt, R., & Weise, M. A standardisation framework for bio-logging data to advance ecological research and conservation. Methods in Ecology and Evolution, 12, (2021): 996–1007, https://doi.org/10.1111/2041-210X.13593., 1. Bio-logging data obtained by tagging animals are key to addressing global conservation challenges. However, the many thousands of existing bio-logging datasets are not easily discoverable, universally comparable, nor readily accessible through existing repositories and across platforms, slowing down ecological research and effective management. A set of universal standards is needed to ensure discoverability, interoperability and effective translation of bio-logging data into research and management recommendations. 2. We propose a standardisation framework adhering to existing data principles (FAIR: Findable, Accessible, Interoperable and Reusable; and TRUST: Transparency, Responsibility, User focus, Sustainability and Technology) and involving the use of simple templates to create a data flow from manufacturers and researchers to compliant repositories, where automated procedures should be in place to prepare data availability into four standardised levels: (a) decoded raw data, (b) curated data, (c) interpolated data and (d) gridded data. Our framework allows for integration of simple tabular arrays (e.g. csv files) and creation of sharable and interoperable network Common Data Form (netCDF) files containing all the needed information for accuracy-of-use, rightful attribution (ensuring data providers keep ownership through the entire process) and data preservation security. 3. We show the standardisation benefits for all stakeholders involved, and illustrate the application of our framework by focusing on marine animals and by providing examples of the workflow across all data levels, including filled templates and code to process data between levels, as well as templates to prepare netCDF files ready for sharing. 4. Adoption of our framework will facilitate collection of Essential Ocean Variables (EOVs) in support of the Global Ocean Observing System (GOOS) and inter-governmental assessments (e.g. the World Ocean Assessment), and will provide a starting point, We are thankful to ONR and UWA OI for funding the workshop, and to ARC for DP210103091. A.M.M.S. was funded by a 2020 Pew Fellowship in Marine Conservation, and also supported by AIMS. C.R. was the recipient of a Radcliffe Fellowship at the Radcliffe Institute for Advanced Study, Harvard University.
- Published
- 2021
27. Animal Borne Ocean Sensors – AniBOS – An Essential Component of the Global Ocean Observing System
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Mcmahon, Clive R., Roquet, Fabien, Baudel, Sophie, Belbeoch, Mathieu, Bestley, Sophie, Blight, Clint, Boehme, Lars, Carse, Fiona, Costa, Daniel P., Fedak, Michael A., Guinet, Christophe, Harcourt, Robert, Heslop, Emma, Hindell, Mark A., Hoenner, Xavier, Holland, Kim, Holland, Mellinda, Jaine, Fabrice R. A., Jeanniard Du Dot, Tiphaine, Jonsen, Ian, Keates, Theresa R., Kovacs, Kit M., Labrousse, Sara, Lovell, Philip, Lydersen, Christian, March, David, Mazloff, Matthew, Mckinzie, Megan K., Muelbert, Mônica M. C., O’brien, Kevin, Phillips, Lachlan, Portela Rodriguez, Esther, Pye, Jonathan, Rintoul, Stephen, Sato, Katsufumi, Sequeira, Ana M. M., Simmons, Samantha E., Tsontos, Vardis M., Turpin, Victor, Van Wijk, Esmee, Vo, Danny, Wege, Mia, Whoriskey, Frederick Gilbert, Wilson, Kenady, Woodward, Bill, Mcmahon, Clive R., Roquet, Fabien, Baudel, Sophie, Belbeoch, Mathieu, Bestley, Sophie, Blight, Clint, Boehme, Lars, Carse, Fiona, Costa, Daniel P., Fedak, Michael A., Guinet, Christophe, Harcourt, Robert, Heslop, Emma, Hindell, Mark A., Hoenner, Xavier, Holland, Kim, Holland, Mellinda, Jaine, Fabrice R. A., Jeanniard Du Dot, Tiphaine, Jonsen, Ian, Keates, Theresa R., Kovacs, Kit M., Labrousse, Sara, Lovell, Philip, Lydersen, Christian, March, David, Mazloff, Matthew, Mckinzie, Megan K., Muelbert, Mônica M. C., O’brien, Kevin, Phillips, Lachlan, Portela Rodriguez, Esther, Pye, Jonathan, Rintoul, Stephen, Sato, Katsufumi, Sequeira, Ana M. M., Simmons, Samantha E., Tsontos, Vardis M., Turpin, Victor, Van Wijk, Esmee, Vo, Danny, Wege, Mia, Whoriskey, Frederick Gilbert, Wilson, Kenady, and Woodward, Bill
- Abstract
Marine animals equipped with biological and physical electronic sensors have produced long-term data streams on key marine environmental variables, hydrography, animal behavior and ecology. These data are an essential component of the Global Ocean Observing System (GOOS). The Animal Borne Ocean Sensors (AniBOS) network aims to coordinate the long-term collection and delivery of marine data streams, providing a complementary capability to other GOOS networks that monitor Essential Ocean Variables (EOVs), essential climate variables (ECVs) and essential biodiversity variables (EBVs). AniBOS augments observations of temperature and salinity within the upper ocean, in areas that are under-sampled, providing information that is urgently needed for an improved understanding of climate and ocean variability and for forecasting. Additionally, measurements of chlorophyll fluorescence and dissolved oxygen concentrations are emerging. The observations AniBOS provides are used widely across the research, modeling and operational oceanographic communities. High latitude, shallow coastal shelves and tropical seas have historically been sampled poorly with traditional observing platforms for many reasons including sea ice presence, limited satellite coverage and logistical costs. Animal-borne sensors are helping to fill that gap by collecting and transmitting in near real time an average of 500 temperature-salinity-depth profiles per animal annually and, when instruments are recovered (∼30% of instruments deployed annually, n = 103 ± 34), up to 1,000 profiles per month in these regions. Increased observations from under-sampled regions greatly improve the accuracy and confidence in estimates of ocean state and improve studies of climate variability by delivering data that refine climate prediction estimates at regional and global scales. The GOOS Observations Coordination Group (OCG) reviews, advises on and coordinates activities across the global ocean observing networks to stren
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- 2021
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28. Maximizing benefits from punctual ocean infrastructure: An ethical perspective
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Whoriskey, Frederick, Barbier, Michele, Mazur, Mackenzie, Hahn, Tobias, Kritzer, Jacob, Vallee, Richard, Whoriskey, Frederick, Barbier, Michele, Mazur, Mackenzie, Hahn, Tobias, Kritzer, Jacob, and Vallee, Richard
- Abstract
Ethics are becoming a component of best practices in ocean science and observing systems, with maximization of the benefits that stem from investments in ocean science/monitoring being one of the significant ethical issues the science community needs to tackle. Sustained ocean observing systems on issues of global importance are coordinated, internationally sanctioned and making the most out of the resources accorded to them and consequently in a comfortable ethical space. However, huge investments are made globally annually in establishing infrastructure for shorter-term, punctual studies that address other science needs. More could be done to maximize the benefits and impacts of these punctual efforts. Given punctual infrastructure’s small and frequently transient nature, connections to enable sharing will probably be done locally, and both potential additional users and owners of the infrastructure will need to be energetic, receptive and flexible. The accommodation of new uses will have to be balanced against any costs these new activities may impose on the infrastructure. However, such adaptive infrastructures may be the most efficient way to provide the resources needed to identify and monitor emerging or new ocean stressors.
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- 2021
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29. The quest for successful Atlantic salmon restoration: perspectives, priorities, and maxims
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Lennox, Robert J., Alexandre, Carlos M., Almeida, Pedro R., Bailey, Kevin M., Barlaup, Bjørn T., Bøe, Kristin, Breukelaar, André, Erkinaro, Jaakko, Forseth, Torbjørn, Gabrielsen, Sven-Erik, Halfyard, Edmund, Hanssen, Erlend M., Karlsson, Sten, Koch, Stephanie, Koed, Anders, Langåker, Roy M., Lo, Håvard, Lucas, Martyn C., Mahlum, Shad, Perrier, Charles, Pulg, Ulrich, Sheehan, Timothy, Skoglund, Helge, Svenning, Martin, Thorstad, Eva B., Velle, Gaute, Whoriskey, Frederick G., Vollset, Knut Wiik, Lennox, Robert J., Alexandre, Carlos M., Almeida, Pedro R., Bailey, Kevin M., Barlaup, Bjørn T., Bøe, Kristin, Breukelaar, André, Erkinaro, Jaakko, Forseth, Torbjørn, Gabrielsen, Sven-Erik, Halfyard, Edmund, Hanssen, Erlend M., Karlsson, Sten, Koch, Stephanie, Koed, Anders, Langåker, Roy M., Lo, Håvard, Lucas, Martyn C., Mahlum, Shad, Perrier, Charles, Pulg, Ulrich, Sheehan, Timothy, Skoglund, Helge, Svenning, Martin, Thorstad, Eva B., Velle, Gaute, Whoriskey, Frederick G., and Vollset, Knut Wiik
- Abstract
Atlantic salmon is often a focal species of restoration efforts throughout the north Atlantic and it is therefore an excellent case study for how best to design programmes to address and mitigate threats and correct population declines. This perspective is written to promote the work that has been accomplished towards restoration of Atlantic salmon populations and synthesize how we believe the lessons can be used effectively to support efforts by management agencies to restore populations. We reviewed where restoration is needed for Atlantic salmon, agreed on definitions for three levels of successful restoration, and then applied these criteria to 49 published papers focused on Atlantic salmon restoration. We identified 16 successful examples of restoration among 49 papers reviewed and discussed what interventions led to success versus failure. We then addressed key questions about when hatchery stocking should be used as part of a restoration measure and whether local restoration efforts are enough when these wide-ranging species encounter broad-scale changes in the north Atlantic, specifically related to issues of climate change and to marine survival. We advise to avoid restoration as much as possible by protecting and managing existing populations and when restoration is necessary, problems should be identified and addressed in partnership with river users. With appropriate resources and research to resolve ongoing mysteries, restoration of lost Atlantic salmon populations is absolutely feasible.
- Published
- 2021
30. A standardisation framework for bio-logging data to advance ecological research and conservation
- Author
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The Pew Charitable Trusts, Harvard University, Sequeira, Ana M. M., O'Toole, Malcolm, Keates, Theresa R., McDonnell, Laura H, Braun, Camrin D., Hoenner, Xavier, Jaine, Fabrice R. A., Jonsen, Ian D., Newman, Peggy, Pye, Jonathan, Bograd, Steven J., Hays, Graeme C., Hazen, Elliott L., Holland, Melinda, Tsontos, Vardis M., Blight, Clint, Cagnacci, Francesca, Davidson, Sarah C., Dettki, Holger, Duarte, Carlos M., Dunn, Daniel C., Eguíluz, Víctor M., Fedak, Michael, Gleiss, Adrian C., Hammerschlag, Neil, Hindell, Mark A., Holland, Kim, Janekovic, Ivica, McKinzie, Megan K., Muelbert, Monica M. C., Pattiaratchi, Chari, Rutz, Christian, Sims, David W., Simmons, Samantha E., Townsend, Brendal, Whoriskey, Frederick, Woodward, Bill, Costa, Daniel P., Heupel, Michelle R., McMahon, Clive R., Harcourt, Rob, Weise, Michael, The Pew Charitable Trusts, Harvard University, Sequeira, Ana M. M., O'Toole, Malcolm, Keates, Theresa R., McDonnell, Laura H, Braun, Camrin D., Hoenner, Xavier, Jaine, Fabrice R. A., Jonsen, Ian D., Newman, Peggy, Pye, Jonathan, Bograd, Steven J., Hays, Graeme C., Hazen, Elliott L., Holland, Melinda, Tsontos, Vardis M., Blight, Clint, Cagnacci, Francesca, Davidson, Sarah C., Dettki, Holger, Duarte, Carlos M., Dunn, Daniel C., Eguíluz, Víctor M., Fedak, Michael, Gleiss, Adrian C., Hammerschlag, Neil, Hindell, Mark A., Holland, Kim, Janekovic, Ivica, McKinzie, Megan K., Muelbert, Monica M. C., Pattiaratchi, Chari, Rutz, Christian, Sims, David W., Simmons, Samantha E., Townsend, Brendal, Whoriskey, Frederick, Woodward, Bill, Costa, Daniel P., Heupel, Michelle R., McMahon, Clive R., Harcourt, Rob, and Weise, Michael
- Abstract
Bio-logging data obtained by tagging animals are key to addressing global conservation challenges. However, the many thousands of existing bio-logging datasets are not easily discoverable, universally comparable, nor readily accessible through existing repositories and across platforms, slowing down ecological research and effective management. A set of universal standards is needed to ensure discoverability, interoperability and effective translation of bio-logging data into research and management recommendations. We propose a standardisation framework adhering to existing data principles (FAIR: Findable, Accessible, Interoperable and Reusable; and TRUST: Transparency, Responsibility, User focus, Sustainability and Technology) and involving the use of simple templates to create a data flow from manufacturers and researchers to compliant repositories, where automated procedures should be in place to prepare data availability into four standardised levels: (a) decoded raw data, (b) curated data, (c) interpolated data and (d) gridded data. Our framework allows for integration of simple tabular arrays (e.g. csv files) and creation of sharable and interoperable network Common Data Form (netCDF) files containing all the needed information for accuracy-of-use, rightful attribution (ensuring data providers keep ownership through the entire process) and data preservation security. We show the standardisation benefits for all stakeholders involved, and illustrate the application of our framework by focusing on marine animals and by providing examples of the workflow across all data levels, including filled templates and code to process data between levels, as well as templates to prepare netCDF files ready for sharing. Adoption of our framework will facilitate collection of Essential Ocean Variables (EOVs) in support of the Global Ocean Observing System (GOOS) and inter-governmental assessments (e.g. the World Ocean Assessment), and will provide a starting point for broader
- Published
- 2021
31. A standardisation framework for bio‐logging data to advance ecological research and conservation
- Author
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Sequeira, Ana M. M., primary, O'Toole, Malcolm, additional, Keates, Theresa R., additional, McDonnell, Laura H., additional, Braun, Camrin D., additional, Hoenner, Xavier, additional, Jaine, Fabrice R. A., additional, Jonsen, Ian D., additional, Newman, Peggy, additional, Pye, Jonathan, additional, Bograd, Steven J., additional, Hays, Graeme C., additional, Hazen, Elliott L., additional, Holland, Melinda, additional, Tsontos, Vardis M., additional, Blight, Clint, additional, Cagnacci, Francesca, additional, Davidson, Sarah C., additional, Dettki, Holger, additional, Duarte, Carlos M., additional, Dunn, Daniel C., additional, Eguíluz, Victor M., additional, Fedak, Michael, additional, Gleiss, Adrian C., additional, Hammerschlag, Neil, additional, Hindell, Mark A., additional, Holland, Kim, additional, Janekovic, Ivica, additional, McKinzie, Megan K., additional, Muelbert, Mônica M. C., additional, Pattiaratchi, Chari, additional, Rutz, Christian, additional, Sims, David W., additional, Simmons, Samantha E., additional, Townsend, Brendal, additional, Whoriskey, Frederick, additional, Woodward, Bill, additional, Costa, Daniel P., additional, Heupel, Michelle R., additional, McMahon, Clive R., additional, Harcourt, Rob, additional, and Weise, Michael, additional
- Published
- 2021
- Full Text
- View/download PDF
32. Prevalence and recurrence of escaped farmed Atlantic salmon (Salmo salar) in eastern North American rivers
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Morris, Matthew R.J., Fraser, Dylan J., Heggelin, Anthony J., Whoriskey, Frederick G., Carr, Jonathan W., O'Neil, Shane F., and Hutchings, Jeffrey A.
- Subjects
Atlantic salmon -- Distribution ,Fishery management -- Methods ,Fish populations -- Distribution ,Fish populations -- Management ,Company distribution practices ,Company business management ,Earth sciences - Abstract
Knowledge of the prevalence of escaped farmed fishes in the wild is an essential first step to assessing the risk resulting from interactions between farmed and wild fishes. This is especially important in eastern North America, where Atlantic salmon (Salmo salar) aquaculture occurs near wild Atlantic salmon rivers and where many wild salmon populations are severely depressed. Here, we review the literature on the incidence of escaped farmed salmon in eastern North American rivers, for which there has been no comprehensive compilation to date. Escaped farmed salmon have been found in 54 of 62 (87%) rivers investigated within a 300 km radius of the aquaculture industry since 1984, including 11 rivers that contain endangered salmon populations. Averaged among all investigations, the proportional representation of farmed salmon among adults entering the rivers from the sea was 9.2% (range 0% to 100%). Where data were sufficient to examine temporal trends, farmed salmon proportions varied considerably over time, suggesting that escape events are episodic in nature. We conclude that escaped farmed salmon are sufficiently prevalent in eastern North American rivers to pose a potentially serious risk to the persistence of wild salmon populations, especially in those rivers that are adjacent to existing aquaculture sites. Une evaluation de la prevalence des poissons echappes de pisciculture en nature est un premier pas essentiel dans la determination des risques relies aux interactions entre les poissons d'elevage et les poissons sauvages. La situation est particulierement serieuse dans l'est de l'Amerique du Nord ou des cultures de saumons atlantiques (Salmo salar) se retrouvent pres de rivieres a saumons atlantiques sauvages et ou plusieurs des populations de saumons sauvages sont considerablement reduites. Nous faisons ici une revue de la litterature sur l'incidence de poissons echappes de culture dans les rivieres de l'est de l'Amerique du Nord, dont il n'existe pas a ce jour de compilation exhaustive. On a trouve des saumons echappes de culture dans 54 des 62 (87 %) rivieres etudiees dans un rayon de 300 km de l'industrie piscicole depuis 1984, dont 11 rivieres contenant des populations de saumons en voie de disparition. Dans l'ensemble des inventaires, la proportion moyenne de saumons de pisciculture parmi les saumons qui penetrent dans les rivieres a partir de la mer est de 9,2 % (etendue: 0 % a 100 %). Dans les cas ou les donnees sont assez nombreuses pour permettre d'etudier les tendances temporelles, les proportions de saumons de pisciculture varient considerablement dans le temps, ce qui laisse croire que les incidents de fuites sont de nature episodique. Nous concluons que la prevalence de saumons echappes de pisciculture est suffisamment grande dans les rivieres de l'est de l'Amerique du Nord qu'elle represente une menace pour la persistance des populations de saumons sauvages, particulierement dans les rivieres qui sont a proximite de sites actuels d'aquaculture. [Traduit par la Redaction], Introduction Worldwide declines in wild fish stocks combined with a growing human population have resulted in increased demands for aquaculture production. Over 25% of the world's fish consumption is now [...]
- Published
- 2008
33. Assessing anadromy of brook char (Salvelinus fontinalis) using scale microchemistry
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Courtemanche, David A., Whoriskey, Frederick G. Jr., Bujold, Valerie, and Curry, R. Allen
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Anadromous fishes -- Physiological aspects ,Brook trout -- Physiological aspects ,Calcium -- Measurement ,Fresh water -- Influence ,Sea-water -- Influence ,Strontium -- Measurement ,Microchemistry ,Earth sciences - Abstract
Abstract: Brook char (Salvelinus fontinalis) exist in both freshwater and anadromous forms, often in sympatry, the ecology of the latter being poorly understood. As strontium (Sr) can substitute to calcium [...]
- Published
- 2006
34. A case for restoring unity between biotelemetry and bio-logging to enhance animal tracking research
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Cooke, Steven J., primary, Lennox, Robert J., additional, Brownscombe, Jacob W., additional, Iverson, Sara J., additional, Whoriskey, Frederick G., additional, Millspaugh, Joshua J., additional, Hussey, Nigel E., additional, Crossin, Glenn T., additional, Godley, Brendan J., additional, and Harcourt, Robert, additional
- Published
- 2021
- Full Text
- View/download PDF
35. Atlantic salmon post-smolt migration routes in the Gulf of St. Lawrence
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Lefèvre, Marylise A., Stokesbury, Michael J. W., Whoriskey, Frederick G., and Dadswell, Michael J.
- Published
- 2012
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36. Networked Animal Telemetry in the Northwest Atlantic and Caribbean Waters
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Bangley, Charles W., primary, Whoriskey, Frederick G., additional, Young, Joy M., additional, and Ogburn, Matthew B., additional
- Published
- 2020
- Full Text
- View/download PDF
37. Microbial diversity of the glass sponge Vazella pourtalesii in response to anthropogenic activities
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Busch, Kathrin, primary, Beazley, Lindsay, additional, Kenchington, Ellen, additional, Whoriskey, Frederick, additional, Slaby, Beate, additional, and Hentschel, Ute, additional
- Published
- 2020
- Full Text
- View/download PDF
38. A Novel Framework to Protect Animal Data in a World of Ecosurveillance
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Lennox, Robert J, primary, Harcourt, Robert, primary, Bennett, Joseph R, primary, Davies, Alasdair, primary, Ford, Adam T, primary, Frey, Remo M, primary, Hayward, Matt W, primary, Hussey, Nigel E, primary, Iverson, Sara J, primary, Kays, Roland, primary, Kessel, Steven T, primary, Mcmahon, Clive, primary, Muelbert, Monica, primary, Murray, Taryn S, primary, Nguyen, Vivian M, primary, Pye, Jonathan D, primary, Roche, Dominique G, primary, Whoriskey, Frederick G, primary, Young, Nathan, primary, and Cooke, Steven J, primary
- Published
- 2020
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39. Atlantic salmon on the brink
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Anderson, John M., Whoriskey, Frederick G., and Goode, Andrew
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Atlantic salmon -- Patient outcomes ,Endangered species -- Protection and preservation - Published
- 2000
40. Gerry (Gerard) FitzGerald — an aggressive scientist
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Whoriskey, Frederick G.
- Published
- 1995
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41. A nonlethal approach using strontium in scales to distinguish periods of marine and freshwater residency of anadromous species
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Courtemanche, David A, Bujold, Valerie, Curry, R Allen, and Whoriskey, Frederick G, Jr.
- Published
- 2005
42. Evolving and sustaining ocean best practices and standards for the next decade
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Pearlman, Jay, Bushnell, Mark, Coppola, Laurent, Karstensen, Johannes, Buttigieg, Pier Luigi, Pearlman, Francoise, Simpson, Pauline, Barbier, Michele, Muller-Karger, Frank E., Munoz-Mas, Cristian, Pissierssens, Peter, Chandler, Cynthia L., Hermes, Juliet, Heslop, Emma, Jenkyns, Reyna, Achterberg, Eric P., Bensi, Manuel, Bittig, Henry C., Blandin, Jerome, Bosch, Julie, Bourles, Bernard, Bozzano, Roberto, Buck, Justin J. H., Burger, Eugene, Cano, Daniel, Cardin, Vanessa, Llorens, Miguel Charcos, Cianca, Andrés, Chen, Hua, Cusack, Caroline, Delory, Eric, Garello, Rene, Giovanetti, Gabriele, Harscoat, Valerie, Hartman, Susan, Heitsenrether, Robert, Jirka, Simon, Lara-Lopez, Ana, Lantér, Nadine, Leadbetter, Adam, Manzella, Giuseppe, Maso, Joan, McCurdy, Andrea, Moussat, Eric, Ntoumas, Manolis, Pensieri, Sara, Petihakis, George, Pinardi, Nadia, Pouliquen, Sylvie, Przeslawski, Rachel, Roden, Nicholas P., Silke, Joe, Tamburri, Mario N., Tang, Hairong, Tanhua, Toste, Telszewski, Maciej, Testor, Pierre, Thomas, Julie, Waldmann, Christoph, Whoriskey, Frederick G., Pearlman, Jay, Bushnell, Mark, Coppola, Laurent, Karstensen, Johannes, Buttigieg, Pier Luigi, Pearlman, Francoise, Simpson, Pauline, Barbier, Michele, Muller-Karger, Frank E., Munoz-Mas, Cristian, Pissierssens, Peter, Chandler, Cynthia L., Hermes, Juliet, Heslop, Emma, Jenkyns, Reyna, Achterberg, Eric P., Bensi, Manuel, Bittig, Henry C., Blandin, Jerome, Bosch, Julie, Bourles, Bernard, Bozzano, Roberto, Buck, Justin J. H., Burger, Eugene, Cano, Daniel, Cardin, Vanessa, Llorens, Miguel Charcos, Cianca, Andrés, Chen, Hua, Cusack, Caroline, Delory, Eric, Garello, Rene, Giovanetti, Gabriele, Harscoat, Valerie, Hartman, Susan, Heitsenrether, Robert, Jirka, Simon, Lara-Lopez, Ana, Lantér, Nadine, Leadbetter, Adam, Manzella, Giuseppe, Maso, Joan, McCurdy, Andrea, Moussat, Eric, Ntoumas, Manolis, Pensieri, Sara, Petihakis, George, Pinardi, Nadia, Pouliquen, Sylvie, Przeslawski, Rachel, Roden, Nicholas P., Silke, Joe, Tamburri, Mario N., Tang, Hairong, Tanhua, Toste, Telszewski, Maciej, Testor, Pierre, Thomas, Julie, Waldmann, Christoph, and Whoriskey, Frederick G.
- Abstract
© The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Pearlman, J., Bushnell, M., Coppola, L., Karstensen, J., Buttigieg, P. L., Pearlman, F., Simpsons, P., Barbier, M., Muller-Karger, F. E., Munoz-Mas, C., Pissierssens, P., Chandler, C., Hermes, J., Heslop, E., Jenkyns, R., Achterberg, E. P., Bensi, M., Bittig, H. C., Blandin, J., Bosch, J., Bourles, B., Bozzano, R., Buck, J. J. H., Burger, E. F., Cano, D., Cardin, V., Llorens, M. C., Cianca, A., Chen, H., Cusack, C., Delory, E., Garello, R., Giovanetti, G., Harscoat, V., Hartman, S., Heitsenrether, R., Jirka, S., Lara-Lopez, A., Lanteri, N., Leadbetter, A., Manzella, G., Maso, J., McCurdy, A., Moussat, E., Ntoumas, M., Pensieri, S., Petihakis, G., Pinardi, N., Pouliquen, S., Przeslawski, R., Roden, N. P., Silke, J., Tamburri, M. N., Tang, H., Tanhua, T., Telszewski, M., Testor, P., Thomas, J., Waldmann, C., & Whoriskey, F. Evolving and sustaining ocean best practices and standards for the next decade. Frontiers in Marine Science, 6, (2019):277, doi:10.3389/fmars.2019.00277., The oceans play a key role in global issues such as climate change, food security, and human health. Given their vast dimensions and internal complexity, efficient monitoring and predicting of the planet’s ocean must be a collaborative effort of both regional and global scale. A first and foremost requirement for such collaborative ocean observing is the need to follow well-defined and reproducible methods across activities: from strategies for structuring observing systems, sensor deployment and usage, and the generation of data and information products, to ethical and governance aspects when executing ocean observing. To meet the urgent, planet-wide challenges we face, methods across all aspects of ocean observing should be broadly adopted by the ocean community and, where appropriate, should evolve into “Ocean Best Practices.” While many groups have created best practices, they are scattered across the Web or buried in local repositories and many have yet to be digitized. To reduce this fragmentation, we introduce a new open access, permanent, digital repository of best practices documentation (oceanbestpractices.org) that is part of the Ocean Best Practices System (OBPS). The new OBPS provides an opportunity space for the centralized and coordinated improvement of ocean observing methods. The OBPS repository employs user-friendly software to significantly improve discovery and access to methods. The software includes advanced semantic technologies for search capabilities to enhance repository operations. In addition to the repository, the OBPS also includes a peer reviewed journal research topic, a forum for community discussion and a training activity for use of best practices. Together, these components serve to realize a core objective of the OBPS, which is to enable the ocean community to create superior methods for every activity in ocean observing from research to operations to applications that are agreed upon and broadly adopted across communities. Using, The Ocean Best Practices project has received funding from the European Union’s Horizon 2020 Research and Innovation Program under grant agreement no: 633211 (AtlantOS), no. 730960 (SeaDataCloud) and no: 654310 (ODIP). Funding was also received from the NSF OceanObs Research Coordination Network under NSF grant 1143683. The Best Practices Handbook for fixed observatories has been funded by the FixO3 project financed by the European Commission through the Seventh Framework Programme for Research, grant agreement no. 312463. The Harmful Algal Blooms Forecast Report was funded by the Interreg Atlantic Area Operational Programme Project PRIMROSE (Grant Agreement No. EAPA_182/2016), and the AtlantOS project (see above). PB acknowledges funding from the Helmholtz Programme Frontiers in Arctic Marine Monitoring (FRAM) conducted by the Alfred-Wegener-Institut. JM acknowledges fundng from the WeObserve project under the European Union’s Horizon 2020 Research and Innovation Program (grant agreement no. 776740). MTe acknowledges support from the US National Science Foundation grant OCE-1840868 to the Scientific Committee on Oceanic Research (SCOR, US) FM-K acknowledges support by NSF Grant 1728913 ‘OceanObS Research Coordination Network’. Funding was also provided by NASA grant NNX14AP62A ‘National Marine Sanctuaries as Sentinel Sites for a Demonstration Marine Biodiversity Observation Network (MBON)’ funded under the National Ocean Partnership Program (NOPP RFP NOAA-NOS-IOOS-2014-2003803 in partnership between NOAA, BOEM, and NASA), and the U.S. Integrated Ocean Observing System (IOOS) Program Office.
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- 2019
43. One Hundred Pressing Questions on the Future of Global Fish Migration Science, Conservation, and Policy
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J. Lennox, Robert, P. Paukert, Craig, Aarestrup, Kim, Auger-Méthé, Marie, Baumgartner, Lee, Birnie-Gauvin, Kim, Bøe, Kristin, Brink, Kerry, W. Brownscombe, Jacob, Chen, Yushun, G. Davidsen, Jan, J. Eliason, Erika, Filous, Alexander, M. Gillanders, Bronwyn, Palm Helland, Ingeborg, Z. Horodysky, Andrij, R. Januchowski-Hartley, Stephanie, K. Lowerre-Barbieri, Susan, C. Lucas, Martyn, G. Martins, Eduardo, J. Murchie, Karen, S. Pompeu, Paulo, Power, Michael, Raghavan, Rajeev, J. Rahel, Frank, Secor, David, D. Thiem, Jason, B. Thorstad, Eva, Ueda, Hiroshi, G. Whoriskey, Frederick, J. Cooke, Steven, J. Lennox, Robert, P. Paukert, Craig, Aarestrup, Kim, Auger-Méthé, Marie, Baumgartner, Lee, Birnie-Gauvin, Kim, Bøe, Kristin, Brink, Kerry, W. Brownscombe, Jacob, Chen, Yushun, G. Davidsen, Jan, J. Eliason, Erika, Filous, Alexander, M. Gillanders, Bronwyn, Palm Helland, Ingeborg, Z. Horodysky, Andrij, R. Januchowski-Hartley, Stephanie, K. Lowerre-Barbieri, Susan, C. Lucas, Martyn, G. Martins, Eduardo, J. Murchie, Karen, S. Pompeu, Paulo, Power, Michael, Raghavan, Rajeev, J. Rahel, Frank, Secor, David, D. Thiem, Jason, B. Thorstad, Eva, Ueda, Hiroshi, G. Whoriskey, Frederick, and J. Cooke, Steven
- Abstract
Migration is a widespread but highly diverse component of many animal life histories. Fish migrate throughout the world's oceans, within lakes and rivers, and between the two realms, transporting matter, energy, and other species (e.g., microbes) across boundaries. Migration is therefore a process responsible for myriad ecosystem services. Many human populations depend on the presence of predictable migrations of fish for their subsistence and livelihoods. Although much research has focused on fish migration, many questions remain in our rapidly changing world. We assembled a diverse team of fundamental and applied scientists who study fish migrations in marine and freshwater environments to identify pressing unanswered questions. Our exercise revealed questions within themes related to understanding the migrating individual's internal state, navigational mechanisms, locomotor capabilities, external drivers of migration, the threats confronting migratory fish including climate change, and the role of migration. In addition, we identified key requirements for aquatic animal management, restoration, policy, and governance. Lessons revealed included the difficulties in generalizing among species and populations, and in understanding the levels of connectivity facilitated by migrating fishes. We conclude by identifying priority research needed for assuring a sustainable future for migratory fishes.
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- 2019
44. Environmental influences on seasonal distribution of coastal and estuarine fish assemblages at Wemindji, eastern James Bay
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Morin, Bernard, Hudon, Christiane, and Whoriskey, Frederick G.
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- 1992
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45. Stickleback distraction displays: sexual or foraging deception against egg cannibalism?
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Whoriskey, Frederick G.
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Sticklebacks -- Behavior ,Fishes -- Behavior ,Agonistic behavior in animals -- Research ,Zoology and wildlife conservation - Abstract
Three-spined stickleback, Gasterosteus aculeatus, males guarding nests containing eggs were tested for their use of distraction displays against all-male, all-female and mixed male and female conspecific intruder groups. Distraction displays were used against all groups, suggesting that the display is a foraging rather than a sexual deception. Most males used two different displays, with the most obvious being employed primarily when intruders were close to the nest. Males also buried their nests with sand to protect them. Groups with male members made more territorial intrusions and fought more with the residents than all-female groups. However, nest survival-to-hatching was better in mixed and all-male trials than all-female trials. Raiding caused most nest destructions, although suffocation following burying killed some eggs. The high nest survival-to-hatching in the all-male and mixed trials probably occurred because some male intruders established territories. This reduced the number of fish in raiding groups and resulted in joint attacks by several territorial fish on the remaining group members. Resident males could control the remaining fish with aggression. Males guarding nests without eggs also used distraction displays, but they did not bury their nests.
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- 1991
46. ETN Technical Standards Report
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Steckenreuter, Andre, Reubens, Jan, Afonso, Pedro, Bajona, Lenore, and Whoriskey, Frederick
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Development of technical standards for specific European lines and tagging projects in the form of a report.
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- 2018
47. Marine vandringer og områdebruk hos sjøørret og sjørøye i Tosenfjorden
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Davidsen, Jan Grimsrud, Eldøy, Sindre Håvarstein, Sjursen, Aslak Darre, Rønning, Lars, Bordeleau, Xavier, Daverdin, Marc, Bårdsen, Marthe Tangvold, Whoriskey, Frederick G., and Koksvik, Jan Ivar
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- 2018
48. Roadmap for emerging networks
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Connelly, Doug, Afonso, Pedro, Whoriskey, Frederick, Morris, Andrew, Mowlem, Matthew, Pinto, Isabel Sousa, Davies, Neil, Ann-Cathrin Wölfl, Handegard, Nils Olav, Devey, Colin W., Janssen, Felix, Buttigieg, Pier Luigi, and Peplies, Jörg
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Assessment of networks and gap analysis that highlights opportunities for development over three and ten year timescales
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- 2018
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49. One Hundred Pressing Questions on the Future of Global Fish Migration Science, Conservation, and Policy
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Lennox, Robert J., primary, Paukert, Craig P., additional, Aarestrup, Kim, additional, Auger-Méthé, Marie, additional, Baumgartner, Lee, additional, Birnie-Gauvin, Kim, additional, Bøe, Kristin, additional, Brink, Kerry, additional, Brownscombe, Jacob W., additional, Chen, Yushun, additional, Davidsen, Jan G., additional, Eliason, Erika J., additional, Filous, Alexander, additional, Gillanders, Bronwyn M., additional, Helland, Ingeborg Palm, additional, Horodysky, Andrij Z., additional, Januchowski-Hartley, Stephanie R., additional, Lowerre-Barbieri, Susan K., additional, Lucas, Martyn C., additional, Martins, Eduardo G., additional, Murchie, Karen J., additional, Pompeu, Paulo S., additional, Power, Michael, additional, Raghavan, Rajeev, additional, Rahel, Frank J., additional, Secor, David, additional, Thiem, Jason D., additional, Thorstad, Eva B., additional, Ueda, Hiroshi, additional, Whoriskey, Frederick G., additional, and Cooke, Steven J., additional
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- 2019
- Full Text
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50. Effects of sound exposure from a seismic airgun on heart rate, acceleration and depth use in free-swimming Atlantic cod and saithe
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Davidsen, Jan G, primary, Dong, Hefeng, additional, Linné, Markus, additional, Andersson, Mathias H, additional, Piper, Adam, additional, Prystay, Tanya S, additional, Hvam, Eivind B, additional, Thorstad, Eva B, additional, Whoriskey, Frederick, additional, Cooke, Steven J, additional, Sjursen, Aslak D, additional, Rønning, Lars, additional, Netland, Tim C, additional, and Hawkins, Anthony D, additional
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- 2019
- Full Text
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