23 results on '"Tunay Karan"'
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2. Antioxidant Activities of Heracleum platytaenium extracts and Essential Oil
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Tunay Karan and Nusret Genc
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Heracleum platytaenium ,essential oil ,antioxidant ,flavonoids ,phenol ,Agriculture ,Agriculture (General) ,S1-972 - Abstract
Heracleum platytaenium Boiss. has been used in traditional medicine. Antioxidant effect of essential oil as well as extracts of H. platytaenium was investigated. The essential oil was acquired by hydro distillation using a Clevenger type apparatus and GC-MS was used to analyze the essential oil compounds. Antioxidant capacity including ABTS+•, DPPH• scavenging and reducing power activity tests were carried out for essential oil and extracts. Moreover, total phenolic and total flavonoid contents were investigated. n-Octyl acetate (36.5%), apiole (24.9%), and elemicin (20.8%) were the chief products of essential oil. The essential oil and extracts exhibited from weak to moderate activity. The total phenol varied from 19.01 to 130.99 mg GAE/g extract and total flavonoid was fluctuated from 2.0 to 118.4 mg QE/g extract. The most DPPH• scavenging effect was observed in EtOAc extract (IC50 = 24.09 mg ml –1). The ABTS•+ scavenging effect of EtOAc extract was better than synthetic antioxidants BHA, BHT and Trolox.
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- 2018
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3. Chemical Composition and Insecticidal Activity of Origanum syriacum L. Essential Oil Against Sitophilus oryzae and Rhyzopertha dominica
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Tunay Karan, Seyda Simsek, Ilyas Yildiz, and Ramazan Erenler
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origanum syriacum ,insecticidal activity ,fumigant toxicity ,essential oil ,Agriculture ,Plant culture ,SB1-1110 - Abstract
Origanum genus belonging to the Lamiaceae family is aromatic and medicinal plant. It has been used in many countries for medicinal and pharmaceutical purpose. Aerial part of the Origanum syriacum L. was dried at shade. The essential oil was generated by steam distillation and compounds were identified by GC-MS analysis. γ-terpinene (26.7%), thymol (26.6%) and carvacrol (22.9%) was detected as the mail constituents. The essential oil was tested for insecticidal activity against adult of Sitophilus oryzae (L.) (Coleoptera: Curculionidae) and Rhyzopertha dominica (F.) (Coleoptera: Bostrychidae) using fumigation method. Essential oil revealed the excellent fumigant effect on R. dominica adults with a median lethal concentration (LC50) value of 0.124 µl/insect and 0.107 µl/insect for 48 h and 72 h respectively. LC50 values of S. oryzae were found as 0.173 µl/insect and 0.135 µl/insect for 48 h and 72 h respectively. As a result, essential oil of O. syriacum has a potency to be a natural insecticide.
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- 2018
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4. Inhibitory Effect of 6,7-dimethoxy-5-hydroxyflavone on Human Cervix Carcinoma in Vitro
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Ramazan Erenler, Ibrahim Demirtas, Tunay Karan, Muhammed Altun, and Fatih Gul
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kickxia spuria ,flavone ,hela ,Agriculture ,Plant culture ,SB1-1110 - Abstract
Natural products derived from plants play a significant role in drug discovery due to the revealing a large variety of pharmaceutical effects. Kickxia spuriawas collected from Bingol, Turkey. Aerial parts of the plant were boiled in water for 2 h then extracted with ethyl acetate. After evaporation of the solvent by rotary evaporator, the extract was subjected to column chromatography to yield the compound identified as 6,7-dimethoxy-5-hydroxyflavone by spectroscopic method including 1D-, 2D-NMR, LC-TOF/MS. Antiproliferative activity of isolated compound was tested against HeLa (human cervix carcinoma) cell lines by xCELLigence assay, and found out that the compound exhibited excellent activity.
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- 2017
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5. Effect of Salt and pH Stress of Bioactive Metabolite Production in Geitlerinema carotinosum
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Tunay Karan and Ramazan Erenler
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geitlerinema carotinosum ,stress conditions ,norharmane ,hplc ,Agriculture ,Plant culture ,SB1-1110 - Abstract
Cyanobacterial metabolites are natural products that have an important feature in pharmaceutical and medicinal industries. In this study, the presence of the secondary metabolite norharmane in the indole structure was determined in Geitlerinema carotinosum (Geitler) Anagnostidis isolated from Tokat Yesilirmak River and its production in salt stress and pH stress was investigated. In salt stress experiments, cyanobacterium was cultured for two weeks by adding NaCl to BG11 medium in erlenmayers of 0.5, 1.0, 3.0, 5.0 M. pH stress was executed at 5 and 9. Norharmane amount was determined by HPLC using C18 reverse phase column at a temperature of 40 °C and a flow rate of 1 ml / min. The amount of norharman metabolite (μg/g) was calculated according to the Gauss method by drawing a calibration curve over the absorbance value of the standard 247 nm wavelength. According to the analysis results, metabolite production was 0.612, 1.299, 0.011 at 0.5 M, 1.0 M, 3.0 M respectively. At 5 M, there was no norharmane production. The norharmane production is higher at pH 5 (1.293 μg /g) than that of the pH 9 (0.448 μg /g).
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- 2017
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6. Isolation and Molecular Identification of Some Blue-Green Algae (Cyanobacteria) from Freshwater Sites in Tokat Province of Turkey
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Tunay Karan, Ramazan Erenler, and Zekeriya Altuner
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Algae ,16S rRNA ,Cyanobacteria ,Molecular identification ,Phycocyanine ,Agriculture ,Agriculture (General) ,S1-972 - Abstract
Collected blue-green algae (cyanobacteria) from freshwater sites throughout Tokat province and its outlying areas were isolated in laboratory environment and their morphological systematics were determined and also their species identifications were studied by molecular methods. Seven different species of blue-green algae collected from seven different sites were isolated by purifying in cultures in laboratory environment. DNA extractions were made from isolated cells and extracted DNAs were amplified by using PCR. Cyanobacteria specific primers were used to amplify 16S rRNA and phycocyanine gene regions using PCR. Phylogenetic identification of species were conducted by evaluation of obtained sequence analysis data by using computer software. According to species identification by sequence analysis, it was seen that molecular data supports morphological systematics.
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- 2017
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7. Antibacterial Activity of Essential Oils of Origanum bilgeri, Origanum onites, Satureja spicigera Leaves Against Agricultural Plant Pathogenic Bacteria
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Tunay Karan, Sabriye Belguzar, and Bedrettin Selvi
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Organic Chemistry ,Biochemistry ,Analytical Chemistry - Published
- 2021
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8. Galanthus woronowii (Amaryllidaceae)'nin antioksidan aktivitesi ve toplam fenolik içeriği
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Nusret Genc, Tunay Karan, Ilyas Yildiz, Ramazan Erenler, and Özgür Eminağaoğlu
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Antioxidant ,biology ,Traditional medicine ,Chemistry ,medicine.medical_treatment ,Galanthus woronowii ,medicine ,General Medicine ,Amaryllidaceae ,biology.organism_classification - Abstract
Plants have been used for medicinal purpose since ancient times. Due to the including bioactive secondary metabolites, plants have gained the great interest for drug discovery and development process. In this work, Galanthus woronowii was extracted with hexane, dichloromethane and ethyl acetate sequentially. After removing of the solvent by rotary evaporator, crude extracts were yielded. Antioxidant activity including 1,1-diphenyl-2-picrylhydrazyl (DPPH), 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulphonic acid) (ABTS) and reducing power assays were executed on corresponding extracts. In addition, total phenolic content was presented. Ethyl acetate extract included the most phenolic compounds and also it revealed the most antioxidant activity. Hence, this plant could be considered as a promising antioxidant agent.
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- 2019
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9. Stratification strength and light climate explain variation in chlorophyll a at the continental scale in a European multilake survey in a heatwave summer
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Christine Edwards, Yang Yang, Kinga Kwasizur, Agnieszka Napiórkowska-Krzebietke, Jeremy Fonvielle, David Parreño Duque, Mari Carmen Trapote, Triantafyllos Kaloudis, Magdalena Toporowska, Koray Ozhan, Marek Kruk, Pablo Urrutia-Cordero, Cayelan C. Carey, Joana Mankiewicz-Boczek, Judita Koreivienė, Andrea G. Bravo, Hana Nemova, Abdulkadir Yağcı, Eloísa Ramos-Rodríguez, Michał Niedźwiecki, Petar Žutinić, Carmen Cillero-Castro, Moritz Buck, Rodan Geriš, Maria G. Antoniou, Daphne Donis, Tunay Karan, Fuat Bilgin, Agnieszka Ochocka, Lea Tuvikene, Hans-Peter Grossart, Christos Avagianos, Boris Aleksovski, Roberto L. Palomino, Trine Perlt Warming, Kersti Kangro, Justyna Sieńska, Jessica Richardson, Meriç Albay, Rahmi Uysal, Elísabeth Fernández-Morán, João Morais, Valentini Maliaka, Daniel Szymański, Irma Vitonytė, Vítor Gonçalves, Burçin Önem, Jordi Noguero-Ribes, Mikołaj Kokociński, Biel Obrador, Edward Walusiak, Lisette N. de Senerpont Domis, Reyhan Akçaalan, Wojciech Pęczuła, Juan M. Soria, Kadir Çapkın, Meryem Beklioglu, J. A. Gálvez, Korhan Özkan, Petra M. Visser, Özden Fakioglu, Şakir Çinar, Leonardo Cerasino, Dominic Vachon, Victor C. Perello, Magdalena Grabowska, Laura Seelen, David García, Jolanda M. H. Verspagen, Svetislav Krstić, Sevasti-Kiriaki Zervou, Adriano Boscaini, Donald C. Pierson, Kerstin Häggqvist, Carmen Ferriol, Iwona Jasser, Anastasia Hiskia, Miquel Lürling, Elżbieta Wilk-Woźniak, Julita Dunalska, Núria Catalán, José María Blanco, Mehmet Ali Turan Koçer, Valerie McCarthy, Köker Latife, Jorge Juan Montes-Pérez, Itana Bokan Vucelić, Anđelka Plenković-Moraj, Tuğba Ongun Sevindik, Beata Madrecka-Witkowska, Kirsten Christoffersen, Pauliina Salmi, Estela Rodríguez-Pérez, Joanna Rosińska, Barbara Pawlik-Skowrońska, Ilona Gagala-Borowska, Wojciech Krztoń, Elvira Romans, Hans W. Paerl, Spela Remec-Rekar, Magdalena Frąk, Mete Yilmaz, Carmen Pérez-Martínez, Susana Romo, Nur Filiz, Luděk Bláha, Karl . Rothhaupt, Enrique Moreno-Ostos, Markéta Fránková, Iwona Kostrzewska-Szlakowska, Nikoletta Tsiarta, Mehmet Tahir Alp, Joan Gomà, Jūratė Karosienė, Agnieszka Pasztaleniec, Vitor Vasconcelos, Jūratė Kasperovičienė, Filip Stević, Hanna Mazur-Marzec, Maria J. van Herk, Alinne Gurjão de Oliveira, Agnieszka Bańkowska-Sobczak, Sigrid Haande, Ana Maria Antão-Geraldes, Birger Skjelbred, Jose Luis Cereijo, Anna Kozak, Uğur Işkın, Manthos Panou, Agnieszka Budzyńska, Faruk Maraşlıoğlu, Iveta Drastichova, Tanja Žuna Pfeiffer, Ksenija Savadova-Ratkus, R. Carballeira, Alo Laas, Giovanna Flaim, Lucia Chomova, Tina Elersek, Lauri Arvola, Dubravka Špoljarić Maronić, Justyna Kobos, Lars-Anders Hansson, Beata Messyasz, Daniel Frank Mcginnis, Valeriano Rodríguez, Monserrat Real, Spyros Gkelis, Nilsun Demir, Evanthia Mantzouki, Pablo Alcaraz-Párraga, Elżbieta Szeląg-Wasielewska, Micaela Vale, Carlos Rochera, Meral Apaydın Yağcı, Piotr Domek, Jordi Delgado-Martín, Tõnu Feldmann, Michał Wasilewicz, Hatice Tunca, Ülkü Nihan Tavşanoğlu, Marija Gligora Udovič, Ulrike Obertegger, Bárbara Úbeda, Elif Neyran Soylu, Aleksandra Pełechata, Kristiina Mustonen, Danielle Machado-Vieira, Hannah Cromie, Eti E. Levi, Maciej Karpowicz, Nusret Karakaya, Cafer Bulut, Kemal Celik, Lidia Nawrocka, Natalia Jakubowska-Krepska, Armand Hernández, Anna C. Santamans, Sven Teurlincx, Damian Chmura, Arda Özen, Pedro M. Raposeiro, Nico Salmaso, Bastiaan Willem Ibelings, Gizem Bezirci, Kristel Panksep, Antonio Camacho, Theodoros M. Triantis, Antonio Picazo, William Colom-Montero, Teresa Vegas-Vilarrúbia, Manel Leira, Ana García-Murcia, Mariusz Pełechaty, Yvon Verstijnen, Irene Gallego, Mehmet Cesur, Ryszard Gołdyn, Yılmaz, Mete, Ministerio de Ciencia, Innovación y Universidades (España), National Science Foundation (US), AKWA, Aquatic Ecology (AqE), Centre for Limnology (NIOO / CL), Freshwater and Marine Ecology (IBED, FNWI), IBED (FNWI), Fen Edebiyat Fakültesi, Lammi Biological Station, BAİBÜ, Mühendislik Fakültesi, Çevre Mühendisliği Bölümü, and Karakaya, Nusret
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0106 biological sciences ,Temperate ,Aquatic Ecology and Water Quality Management ,010504 meteorology & atmospheric sciences ,Chlorophyll a ,CYANOBACTERIAL BLOOMS ,Mediterranean ,Oceanography ,01 natural sciences ,Filamentous cyanobacteria ,PHYTOPLANKTON DYNAMICS ,Klimatforskning ,Photosystem-II ,Climate change ,Phytoplankton biomass ,chlorophyll ,Temperature anomaly ,Phytoplankton Dynamics ,media_common ,Filamentous Cyanobacteria ,Ecology ,plankton ,TEMPERATE ,Dissolved Organic-Matter ,Plan_S-Compliant_NO ,Art ,Eutrophication ,Biological Sciences ,6. Clean water ,Europe ,kesä ,international ,EUTROPHICATION ,1181 Ecology, evolutionary biology ,articles ,lämpötila ,GREEN-ALGAE ,Natural Sciences ,LAKES ,SHALLOW ,klorofylli ,Thermal stratificaiton ,Climate Research ,media_common.quotation_subject ,multilake survey ,Cyanobacterial Blooms ,Aquatic Science ,phytoplankton ,European lakes ,climate change ,large scale ,light ,stratification ,nutrients ,järvet ,Heat wave ,limnologia ,PHOTOSYSTEM-II ,Settore BIO/07 - ECOLOGIA ,ddc:570 ,Life Science ,biomassa (ekologia) ,0105 earth and related environmental sciences ,Ekologi ,Green-Algae ,WIMEK ,FILAMENTOUS CYANOBACTERIA ,010604 marine biology & hydrobiology ,ilmastonmuutokset ,mikrolevät ,Aquatische Ecologie en Waterkwaliteitsbeheer ,Surface temperature ,Lakes ,Shallow ,13. Climate action ,DISSOLVED ORGANIC-MATTER ,Phytoplankton ,kerrostuneisuus ,Humanities ,valo - Abstract
The authors acknowledge COST Action ES 1105 "CYANOCOST Cyanobacterial blooms and toxins in water resources: Occurrence impacts and management" and COST Action Global Change Biology ES 1201 NETLAKE -Networking Lake Observatories in Europe" for contributing to this study through networking and knowledge sharing with European experts in the field. We acknowledge the members of the Global Lake Ecological Observatory Network (GLEON) for their collaborative spirit and enthusiasm that inspired the grassroots effort of the EMLS. E.M. was supported by a grant from the Swiss State Secretariat for Education, Research and Innovation to Bas Ibelings and by supplementary funding from University of Geneva. We thank Wendy Beekman for the nutrient analysis. We thank Pieter Slot for assisting with the pigment analysis. We thank Dr. Ian Jones for valuable feedback on an earlier version of the manuscript. We thank the Leibniz Institute of Freshwater Ecology and the Aquatic Microbial Ecology Group for logistic and technical support of J. Fonvielle and H.-P. Grossart, and the Leibniz Association for financial support. H.P. was supported by the US National Science Foundation (1840715, 1831096). A.C.'s work was funded by the Spanish Agencia Estatal de Investigacion and EU funds through the project CLIMAWET (CGL2015-69557-R). The collection of data for Lough Erne and Lough Neagh were funded by the Department of Agriculture, Environment and Rural Affairs, Northern Ireland. We are grateful to Kristiina Vuorio from the Freshwater Centre of the Finnish Environment institute for her help in organizing, collecting and analysing samples by the University of Jyvaskyla and to Gerald Dorflinger from the Water Development Department of Cyprus for his assistance with the sampling in Cyprus and for granting the CUT team permission to use WDD's equipment. Finally, we would like to thank the numerous other assistants that helped realizing each local survey. Open access funding provided by Universite de Geneve., To determine the drivers of phytoplankton biomass, we collected standardized morphometric, physical, and biological data in 230 lakes across the Mediterranean, Continental, and Boreal climatic zones of the European continent. Multilinear regression models tested on this snapshot of mostly eutrophic lakes (median total phosphorus [TP] = 0.06 and total nitrogen [TN] = 0.7 mg L-1), and its subsets (2 depth types and 3 climatic zones), show that light climate and stratification strength were the most significant explanatory variables for chlorophyll a (Chl a) variance. TN was a significant predictor for phytoplankton biomass for shallow and continental lakes, while TP never appeared as an explanatory variable, suggesting that under high TP, light, which partially controls stratification strength, becomes limiting for phytoplankton development. Mediterranean lakes were the warmest yet most weakly stratified and had significantly less Chl a than Boreal lakes, where the temperature anomaly from the long-term average, during a summer heatwave was the highest (+4 degrees C) and showed a significant, exponential relationship with stratification strength. This European survey represents a summer snapshot of phytoplankton biomass and its drivers, and lends support that light and stratification metrics, which are both affected by climate change, are better predictors for phytoplankton biomass in nutrient-rich lakes than nutrient concentrations and surface temperature., European Cooperation in Science and Technology (COST) ES 1105 ES 1201, Swiss State Secretariat for Education, Research and Innovation, University of Geneva, Leibniz Association, National Science Foundation (NSF) 1840715 1831096, Spanish Agencia Estatal de Investigacion, European Commission CGL2015-69557-R, Department of Agriculture, Environment and Rural Affairs, Northern Ireland
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- 2021
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10. Theoretical Study on Flavonoids Isolated from Allium vineale
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Faik Gokalp, Ramazan Erenler, and Tunay Karan
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theoretical calculation ,aktivite ,lcsh:TA1-2040 ,activity ,flavonoids ,flavonoidler ,lcsh:Q ,teorik hesaplamalar ,lcsh:Engineering (General). Civil engineering (General) ,lcsh:Science ,lcsh:Science (General) ,lcsh:Q1-390 - Abstract
The chemical properties of chrysoeriol-7-O-[2''-O-E-feruloyl]-β-D-glucoside (1), chrysoeriol (2), and isorhamnetin-3-β-D-glucoside (3) from Allium vineale have been investigated as theoretical. RHF/STO-3G method was used for quantum calculations of chemical properties of these compounds. The structures of the compounds were fully optimized and then the results were evaluated by this method. The properties of compounds were presented and the utilization of these compounds in various fields was investigated by comparison of theoretical results with experimental ones. The experimental antioxidant effects were reported previously. The quantum calculations revealed that chrysoeriol (2) was unstable and was prone to react to the radical compounds. In brief, a good antioxidant can donate the electron to the radical compound easily.
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- 2018
11. Anticancer potential and cytotoxic effect of some freshwater cyanobacteria
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Tunay Karan and Ali Aydın
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Cyanobacteria ,biology ,Cytotoxicity ,Cell ,Pharmaceutical Science ,biology.organism_classification ,Molecular biology ,HeLa ,chemistry.chemical_compound ,medicine.anatomical_structure ,Anticancer ,Nostoc linckia ,chemistry ,Linckia ,Freshwater cyanobacteria, Anticancer, Cytotoxicity, Chroococus minutus, Geitlerinema carotinosum, Nostoc linckia, Anabaena oryzae ,Cell culture ,Lactate dehydrogenase ,Cancer cell ,medicine ,Freshwater cyanobacteria ,Pharmacology (medical) ,Chroococus minutus ,Geitlerinema carotinosum ,Anabaena oryzae - Abstract
Purpose: To investigate the anticancer potential and cytotoxicity of some freshwater cyanobacterial extracts on Human Colon Carcinoma (HT29), Rat Brain Glioma (C6), Human Cervix Carcinoma (HeLa), Human Lung Carcinoma (A549), Human Breast Adenocarcinoma (MCF7), Human Liver Hepatocellular Carcinoma (Hep3B) cancerous cells, African Green Monkey Kidney cells (Vero), and Human Amnion cells (FL).Methods: Chroococus minutus, Geitlerinema carotinosum, Nostoc linckia and Anabaena oryzae were collected from different freshwater habitats and identified. Each cyanobacterium was extracted with methanol. Antiproliferative activities of the cyanobacterial extracts were evaluated by [3-(4, 5-dimethylthiazolyl-2)-2,5-diphenyltetrazolium bromide] (MTT) using HT29, C6, HeLa, A549, MCF7, Hep3B, Vero, and FL cell lines. Cytotoxicity was determined by lactate dehydrogenase (LDH) assay.Results: The cyanobacterial extracts showed varying antiproliferative and cytotoxic effects on cancer cells. G. carotinosum and N. linckia had significant inhibitory effect on C6 cell lines with half-maximal inhibitory (IC50) levels of 112.69 and 121.48 μg/mL, respectively. TGI values for G. carotinosum and N. linckia were 65.07 and 70.61 μg/mL, respectively. LC50 values for these two cyanobacteria were 386.64 and 760.55 μg/mL, respectively. In addition, cyanobacterium A. oryzae displayed excellent antiproliferative effect on MCF7 cancer cells (GI50 = 2.04 μg/mL). The extracts displayed the cytostatic effect on the cell lines.Conclusion: G. carotinosum, N. linckia and A. oryzae exhibit significant activity on various cancer cells. Hence these cyanobacteria may offer promise as anticancer agents.Keywords: Freshwater cyanobacteria, Anticancer, Cytotoxicity, Chroococus minutus, Geitlerinema carotinosum, Nostoc linckia, Anabaena oryzae
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- 2019
12. Metabolic profile and biological activities of Lavandula stoechas L
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Tunay Karan
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Insecticides ,biology ,DPPH ,Plant Extracts ,Rosmarinic acid ,General Medicine ,Reference Standards ,biology.organism_classification ,Fenchone ,Antioxidants ,law.invention ,Steam distillation ,Coleoptera ,chemistry.chemical_compound ,Camphor ,Lavandula ,chemistry ,law ,Metabolome ,Oils, Volatile ,Animals ,Gallic acid ,Food science ,Lavandula stoechas ,Essential oil - Abstract
Medicinal and aromatic plants play a significant role in drug discovery. Lavandula stoechas L. has been used as folk medicine to treat various diseases. The aim of this work is to investigate the phytochemisty of Lavandula stoechas with biological activities. An aerial part of the plant was extracted with methanol. Another sample of plant was boiled in water then aqueous part was extracted with ethyl acetate. Identification and quantification of phenolic compounds, organic acids and flavonoids in methanol extract were carried out by High Performance Liquid Chromatography/Time of Flight/Mass Spectrometry, HPLC-TOF/MS. Rosmarinic acid was found as a chief compound (80.9%). The essential oil was generated by steam distillation and identified by GC-MS. The main constituents were camphor (48.1%) and fenchone (30.5%). The essential oil exhibited good insecticidal activity on Sitophilus granarius and Sitophilus oryzae pests as 43.3% and 62.9% mortality, respectively. However, the methanol extract has only insecticidal activity against S. granaries (50.0%). The antioxidant activities were investigated using assays of 1,1-diphenyl-2-picrylhydrazyl (DPPH•) radical scavenging, reducing power (FRAP), and 2,2'-azinobis-(3-ethylbenzothiazoline-6-sulphonate) (ABTS•+) radical scavenging on both extracts. In addition, total phenolic contents were determined. Total phenolic content of EtOAc extract was found as 2.18 g GAE (Gallic acid equivalent) phenolic compounds/kg plant. Whereas, total phenolic of methanol was 3.33 g GAE/kg plant. EtOAc extract revealed the considerable DPPH• scavenging, ABTS•+ scavenging and reducing power activities with the values of 28.71 (IC50, µg/ml), 8.72 (IC50, µg/ml) and 6.99 (µmol trolox equivalent/mg extract) respectively.
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- 2018
13. Temperature effects explain continental scale distribution of cyanobacterial toxins
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Sigrid Haande, Christos Avagianos, Vítor Gonçalves, Lisette N. de Senerpont Domis, Carlos Rochera, Ana García-Murcia, Kerstin Häggqvist, Reyhan Akçaalan, Jordi Noguero-Ribes, Mariusz Pełechaty, Wojciech Krztoń, Hans-Peter Grossart, Jutta Fastner, Bárbara Úbeda, Wojciech Pęczuła, Nur Filiz, Justyna Kobos, Juan M. Soria, Elif Neyran Soylu, Lars-Anders Hansson, Filip Stević, Luděk Bláha, Hanna Mazur-Marzec, Jolanda M. H. Verspagen, Burçin Önem, Karl-Otto Rothhaupt, Nico Salmaso, Abdulkadir Yağcı, David Parreño Duque, Ksenija Savadova, Nusret Karakaya, Aleksandra Pełechata, Yvon Verstijnen, Carmen Pérez-Martínez, Pauliina Salmi, Gizem Bezirci, Tuğba Ongun Sevindik, Svetislav Krstić, Rahmi Uysal, Laura Seelen, Eloísa Ramos-Rodríguez, Spela Remec-Rekar, Sven Teurlincx, Monserrat Real, Meriç Albay, Donald C. Pierson, Susana Romo, Kristiina Mustonen, Kirsten Christoffersen, Valentini Maliaka, Estela Rodríguez-Pérez, Joanna Rosińska, Nilsun Demir, Mehmet Tahir Alp, Elvira Romans, João Morais, Daniel Szymański, Danielle Machado-Vieira, Damian Chmura, Evanthia Mantzouki, Teresa Vegas-Vilarrúbia, Antonio Picazo, Mikołaj Kokociński, Anastasia Hiskia, Christine Edwards, Yang Yang, Irma Vitonytė, Mehmet Cesur, Agnieszka Bańkowska-Sobczak, Iwona Kostrzewska-Szlakowska, Nikoletta Tsiarta, Anđelka Plenković-Moraj, Miquel Lürling, Ryszard Gołdyn, Kristel Panksep, Kemal Celik, Anna Kozak, Jose Luis Cereijo, Pablo Urrutia-Cordero, Petra M. Visser, Rodan Geriš, Uğur Işkın, Leonardo Cerasino, Kadir Çapkın, Victor C. Perello, Carmen Cillero-Castro, Arda Özen, Manel Leira, Enrique Moreno-Ostos, Şakir Çinar, Agnieszka Budzyńska, Faruk Maraşlıoğlu, Pedro M. Raposeiro, Theodoros M. Triantis, Agnieszka Pasztaleniec, Sevasti-Kiriaki Zervou, Elżbieta Wilk-Woźniak, Edward Walusiak, Kersti Kangro, Jorge Juan Montes-Pérez, Triantafyllos Kaloudis, Mari Carmen Trapote, Pablo Alcaraz-Párraga, José María Blanco, Marek Kruk, Hans W. Paerl, Lidia Nawrocka, Meryem Beklioglu, Antonio Camacho, Moritz Buck, Biel Obrador, Ilona Gagala, Lauri Arvola, Elżbieta Szeląg-Wasielewska, Petar Žutinić, Giovanna Flaim, Núria Catalán, R. Carballeira, Alinne Gurjão de Oliveira, Magdalena Frąk, Alo Laas, Magdalena Grabowska, Dubravka Špoljarić Maronić, Meral Apaydın Yağcı, Itana Bokan Vucelić, Ana Maria Antão-Geraldes, Tõnu Feldmann, Natalia Jakubowska-Krepska, Trine Perlt Warming, Armand Hernández, Anna C. Santamans, Fuat Bilgin, Cayelan C. Carey, Joana Mankiewicz-Boczek, Elísabeth Fernández-Morán, Mete Yilmaz, Iwona Jasser, Boris Aleksovski, Michał Wasilewicz, Agnieszka Ochocka, David García, Lea Tuvikene, Roberto L. Palomino, B.W. Ibelings, Hatice Tunca, Birger Skjelbred, Joan Gomà, Jūratė Karosienė, Maria G. Antoniou, Vitor Vasconcelos, Mehmet Ali Turan Koçer, Eti E. Levi, Markéta Fránková, Beata Madrecka, Barbara Pawlik-Skowrońska, Jeremy Fonvielle, Korhan Özkan, Maciej Karpowicz, Özden Fakioglu, Lucia Chomova, Magdalena Toporowska, Ülkü Nihan Tavşanoğlu, Jūratė Kasperovičienė, Latife Köker, Kinga Kwasizur, Koray Ozhan, Valeriano Rodríguez, William Colom-Montero, Ulrike Obertegger, Micaela Vale, Spyros Gkelis, Michał Niedźwiecki, Tunay Karan, Piotr Domek, Judita Koreivienė, Andrea G. Bravo, Justyna Sieńska, Jessica Richardson, Hana Nemova, Cafer Bulut, Jordi Delgado-Martín, Tanja Žuna Pfeiffer, Marija Gligora Udovič, Manthos Panou, Dietmar Straile, Rafael Marcé, Valerie McCarthy, Iveta Drastichova, Agnieszka Napiórkowska-Krzebietke, J. A. Gálvez, Tina Elersek, Beata Messyasz, Adriano Boscaini, Carmen Ferriol, Julita Dunalska, Freshwater and Marine Ecology (IBED, FNWI), BAİBÜ, Mühendislik Fakültesi, Çevre Mühendisliği Bölümü, Karakaya, Nusret, Universitat de Barcelona, Fakülteler, Fen - Edebiyat Fakültesi, Biyoloji Bölümü, Soylu, Elif Neyran, European Cooperation in Science and Technology, Université de Genève, Tokat Gaziosmanpaşa Üniversitesi, Lammi Biological Station, Doctoral Programme in Atmospheric Sciences, CIIMAR - Centro Interdisciplinar de Investigação Marinha e Ambiental, Yılmaz, Mete, Institute of Agricultural and Environmental Sciences, Mantzouki, Evanthia, Ibelings, Bastiaan Willem, Mantzouki, E, Lurling, M, Fastner, J, Domis, LD, Wilk-Wozniak, E, Koreiviene, J, Seelen, L, Teurlincx, S, Verstijnen, Y, Krzton, W, Walusiak, E, Karosiene, J, Kasperoviciene, J, Savadova, K, Vitonyte, I, Cillero-Castro, C, Budzynska, A, Goldyn, R, Kozak, A, Rosinska, J, Szelag-Wasielewska, E, Domek, P, Jakubowska-Krepska, N, Kwasizur, K, Messyasz, B, Pelechata, A, Pelechaty, M, Kokocinski, M, Garcia-Murcia, A, Real, M, Romans, E, Noguero-Ribes, J, Duque, DP, Fernandez-Moran, E, Karakaya, N, Haggqvist, K, Demir, N, Beklioglu, M, Filiz, N, Levi, EE, Iskin, U, Bezirci, G, Tavsanoglu, UN, Ozhan, K, Gkelis, S, Panou, M, Fakioglu, O, Avagianos, C, Kaloudis, T, Celik, K, Yilmaz, M, Marce, R, Catalan, N, Bravo, AG, Buck, M, Colom-Montero, W, Mustonen, K, Pierson, D, Yang, Y, Raposeiro, PM, Goncalves, V, Antoniou, MG, Tsiarta, N, McCarthy, V, Perello, VC, Feldmann, T, Laas, A, Panksep, K, Tuvikene, L, Gagala, I, Mankiewicz-Boczek, J, Yagci, MA, Cinar, S, Capkin, K, Yagci, A, Cesur, M, Bilgin, F, Bulut, C, Uysal, R, Obertegger, U, Boscaini, A, Flaim, G, Salmaso, N, Cerasino, L, Richardson, J, Visser, PM, Verspagen, JMH, Karan, T, Soylu, EN, Maraslioglu, F, Napiorkowska-Krzebietke, A, Ochocka, A, Pasztaleniec, A, Antao-Geraldes, AM, Vasconcelos, V, Morais, J, Vale, M, Koker, L, Akcaalan, R, Albay, M, Maronic, DS, Stevic, F, Pfeiffer, TZ, Fonvielle, J, Straile, D, Rothhaupt, KO, Hansson, LA, Urrutia-Cordero, P, Blaha, L, Geris, R, Frankova, M, Kocer, MAT, Alp, MT, Remec-Rekar, S, Elersek, T, Triantis, T, Zervou, SK, Hiskia, A, Haande, S, Skjelbred, B, Madrecka, B, Nemova, H, Drastichova, I, Chomova, L, Edwards, C, Sevindik, TO, Tunca, H, Onem, B, Aleksovski, B, Krstic, S, Vucelic, IB, Nawrocka, L, Salmi, P, Machado-Vieira, D, de Oliveira, AG, Delgado-Martin, J, Garcia, D, Cereijo, JL, Goma, J, Trapote, MC, Vegas-Vilarrubia, T, Obrador, B, Grabowska, M, Karpowicz, M, Chmura, D, Ubeda, B, Galvez, JA, Ozen, A, Christoffersen, KS, Warming, TP, Kobos, J, Mazur-Marzec, H, Perez-Martinez, C, Ramos-Rodriguez, E, Arvola, L, Alcaraz-Parraga, P, Toporowska, M, Pawlik-Skowronska, B, Niedzwiecki, M, Peczula, W, Leira, M, Hernandez, A, Moreno-Ostos, E, Blanco, JM, Rodriguez, V, Montes-Perez, JJ, Palomino, RL, Rodriguez-Perez, E, Carballeira, R, Camacho, A, Picazo, A, Rochera, C, Santamans, AC, Ferriol, C, Romo, S, Soria, JM, Dunalska, J, Sienska, J, Szymanski, D, Kruk, M, Kostrzewska-Szlakowska, I, Jasser, I, Zutinic, P, Udovic, MG, Plenkovic-Moraj, A, Frak, M, Bankowska-Sobczak, A, Wasilewicz, M, Ozkan, K, Maliaka, V, Kangro, K, Grossart, HP, Paerl, HW, Carey, CC, Ibelings, BW, Sakarya Üniversitesi/Fen-Edebiyat Fakültesi/Biyoloji Bölümü, Ongun Sevindik, Tuğba, Tunca, Hatice, Hitit Üniversitesi, Fen Edebiyat Fakültesi, Biyoloji Bölümü, and Fen Edebiyat Fakültesi
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light climate ,0106 biological sciences ,thermocline ,Bacterial toxins ,toksiinit ,limit of quantitation ,Toxines bacterianes ,Microcystin-LR ,Toxicology ,01 natural sciences ,Anatoxin-a ,analogs and derivatives ,BLOOMS ,Direct Effects ,uracil ,Water Pollutants ,chemistry.chemical_classification ,Temperatures ,FRESH-WATER ,latitude ,maximum buoyancy frequency ,6. Clean water ,climate change ,Indirect effects ,EUTROPHICATION ,microcystin RR ,articles ,GROWTH ,lämpötila ,LAKES ,microcystin ,anatoxin ,cylindrospermopsin ,temperature ,direct effects ,indirect effects ,spatial distribution ,European Multi Lake Survey ,epilimnetic temperature ,ta1172 ,cyanobacteria, lakes, climate warming, microcystin ,Zoology ,Article ,water pollutant ,MICROCYSTIS-AERUGINOSA ,Alkaloids ,Settore BIO/07 - ECOLOGIA ,NATURAL SCIENCES. Biology ,Spatial distribution ,Microcystis aeruginosa ,Uracil ,lake ,syanobakteerit ,Indirect Effects ,liquid chromatography-mass spectrometry ,1172 Environmental sciences ,Ekologi ,nutrient ,010604 marine biology & hydrobiology ,lcsh:R ,microbiology ,Climatic changes ,microcystin LR ,Anatoxin ,Lakes ,Spatial Distribution ,chemistry ,nodularin ,microbial diversity ,phytoplankton ,ta1181 ,Cylindrospermopsin ,Tropanes ,Cyanobacteria ,Aquatic Ecology and Water Quality Management ,analysis ,Health, Toxicology and Mutagenesis ,lcsh:Medicine ,environmental parameters ,010501 environmental sciences ,medicine.disease_cause ,nitrogen ,chemistry.chemical_compound ,sea surface temperature ,environmental factor ,ddc:550 ,Canvi climàtic ,phosphorus ,PRIRODNE ZNANOSTI. Biologija ,limit of detection ,Ecology ,Cyanobacteria Toxins ,biology ,Temperature ,levinneisyys ,Nodularin ,tropane derivative ,Europe ,DAPHNIA-MAGNA ,İndirect Effects ,Direct effects ,microbial community ,Environmental Monitoring ,high performance liquid chromatography ,Microcystins ,Climate Change ,Bacterial Toxins ,Microcystin ,välittömät oikeusvaikutukset ,cyanobacterium ,ddc:570 ,geographic distribution ,medicine ,bacterial toxin ,controlled study ,ddc:610 ,Institut für Biochemie und Biologie ,0105 earth and related environmental sciences ,nonhuman ,WIMEK ,Toxin ,longitude ,PHYTOPLANKTON ASSEMBLAGES ,Aquatic Ecology ,NITROGEN AVAILABILITY ,anatoxin a ,Aquatische Ecologie en Waterkwaliteitsbeheer ,biology.organism_classification ,Climatic change ,CLIMATE ,13. Climate action ,response variable ,Canvis climàtics - Abstract
Insight into how environmental change determines the production and distribution of cyanobacterial toxins is necessary for risk assessment. Management guidelines currently focus on hepatotoxins (microcystins). Increasing attention is given to other classes, such as neurotoxins (e.g., anatoxin-a) and cytotoxins (e.g., cylindrospermopsin) due to their potency. Most studies examine the relationship between individual toxin variants and environmental factors, such as nutrients, temperature and light. In summer 2015, we collected samples across Europe to investigate the effect of nutrient and temperature gradients on the variability of toxin production at a continental scale. Direct and indirect effects of temperature were the main drivers of the spatial distribution in the toxins produced by the cyanobacterial community, the toxin concentrations and toxin quota. Generalized linear models showed that a Toxin Diversity Index (TDI) increased with latitude, while it decreased with water stability. Increases in TDI were explained through a significant increase in toxin variants such as MC-YR, anatoxin and cylindrospermopsin, accompanied by a decreasing presence of MC-LR. While global warming continues, the direct and indirect effects of increased lake temperatures will drive changes in the distribution of cyanobacterial toxins in Europe, potentially promoting selection of a few highly toxic species or strains. © 2018 by the authors. Licensee MDPI, Basel, Switzerland., The authors acknowledge COST Action ES 1105 “CYANOCOST—Cyanobacterial blooms and toxins in water resources: Occurrence impacts and management” and COST Action ES 1201 “NETLAKE—Networking Lake Observatories in Europe” for contributing to this study through networking and knowledge sharing with European experts in the field. Evanthia Mantzouki was supported by a grant from the Swiss State Secretariat for Education, Research and Innovation (SERI) to Bas Ibelings and by supplementary funding from the University of Geneva. We thank Clare Ahnlund, Ena Suarez and Irene Gallego for helping out with the Swiss survey. We thank Wendy Beekman and Els J. Faassen for the nutrient and toxin analysis.
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- 2018
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14. A European Multi Lake Survey dataset of environmental variables, phytoplankton pigments and cyanotoxins
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Moritz Buck, David García, Nur Filiz, Luděk Bláha, Teresa Vegas-Vilarrúbia, Manel Leira, David Parreño Duque, Donald C. Pierson, Pablo Alcaraz-Párraga, Justyna Kobos, Bárbara Úbeda, Triantafyllos Kaloudis, Elif Neyran Soylu, Eloísa Ramos-Rodríguez, Kerstin Häggqvist, Aleksandra Pełechata, Elżbieta Szeląg-Wasielewska, Meral Apaydın Yağcı, Anna Kozak, Edward Walusiak, Meryem Beklioglu, Monserrat Real, Nusret Karakaya, Carlos Rochera, Iwona Jasser, Kristiina Mustonen, José María Blanco, Delphine Latour, Nilsun Demir, Evanthia Mantzouki, Jutta Fastner, Carmen Cillero-Castro, Danielle Machado-Vieira, Tunay Karan, Jeremy Fonvielle, Kemal Celik, Mehmet Ali Turan Koçer, Miquel Lürling, Rafael Marcé, Dietmar Straile, Valerie McCarthy, Petar Žutinić, Korhan Özkan, Özden Fakioglu, Fuat Bilgin, Maria G. Antoniou, Sarah O'Leary, Itana Bokan Vucelić, Kersti Kangro, Trine Perlt Warming, Hatice Tunca, Kirsten Christoffersen, Lidia Nawrocka, Estela Rodríguez-Pérez, Abdulkadir Yağcı, Justyna Sieńska, Jessica Richardson, Elísabeth Fernández-Morán, Beata Madrecka, Barbara Pawlik-Skowrońska, Hans-Peter Grossart, Petra M. Visser, Leonardo Cerasino, Joanna Rosińska, Ülkü Nihan Tavşanoğlu, Elvira Romans, Boris Aleksovski, Agnieszka Bańkowska-Sobczak, Pauliina Salmi, Latife Köker, Cayelan C. Carey, Magdalena Toporowska, Lauri Arvola, Antonio Picazo, Elisabeth J. Faassen, Cafer Bulut, Joana Mankiewicz-Boczek, William Colom-Montero, Gregory Giuliani, Markéta Fránková, Ulrike Obertegger, Spela Remec-Rekar, Rahmi Uysal, Tanja Žuna Pfeiffer, Sigrid Haande, Jose Luis Cereijo, Victoria Bergkemper, Eilish Beirne, Agnieszka Ochocka, Uğur Işkın, Meriç Albay, Karl-Otto Rothhaupt, Nico Salmaso, Lea Tuvikene, Roberto L. Palomino, Bastiaan Willem Ibelings, Gizem Bezirci, Carmen Pérez-Martínez, Tuğba Ongun Sevindik, Dubravka Špoljarić Maronić, Ana Maria Antão-Geraldes, Jūratė Kasperovičienė, Christos Avagianos, João Morais, Daniel Szymański, Vítor Gonçalves, Susana Romo, Jorge Juan Montes-Pérez, Kristel Panksep, J. A. Gálvez, James B. Campbell, Biel Obrador, Mehmet Cesur, Irma Vitonytė, Andrea Törökné, Hannah Cromie, Tõnu Feldmann, Eti E. Levi, Ryszard Gołdyn, Mikołaj Kokociński, Lisette N. de Senerpont Domis, Kinga Kwasizur, Burçin Önem, Michał Wasilewicz, Magdalena Grabowska, Iwona Kostrzewska-Szlakowska, Mete Yilmaz, Reyhan Akçaalan, Koray Ozhan, Jordi Noguero-Ribes, Antonio Camacho, Giovanna Flaim, Nikoletta Tsiarta, Joan Gomà, Jūratė Karosienė, Elżbieta Wilk-Woźniak, Wojciech Pęczuła, Maciej Karpowicz, Michał Niedźwiecki, Vitor Vasconcelos, Spyros Gkelis, Agnieszka Napiórkowska-Krzebietke, Laura Seelen, Juan M. Soria, Iosif Konstantinou, Kadir Çapkın, Birger Skjelbred, Agnieszka Pasztaleniec, Núria Catalán, Şakir Çinar, Anđelka Plenković-Moraj, Lucia Chomova, Mehmet Tahir Alp, Magdalena Frąk, Theodoros M. Triantis, Adriano Boscaini, Carmen Ferriol, Judita Koreivienė, Julita Dunalska, Andrea G. Bravo, Hana Nemova, Ilona Gagala, Ana García-Murcia, Mariusz Pełechaty, Enrique Moreno-Ostos, Yvon Verstijnen, Lars-Anders Hansson, Ksenija Savadova, Jolanda M. H. Verspagen, Svetislav Krstić, Anastasia Hiskia, Valeriano Rodríguez, Wojciech Krztoń, Filip Stević, Hanna Mazur-Marzec, Agnieszka Budzyńska, Faruk Maraşlıoğlu, R. Carballeira, Alo Laas, Valentini Maliaka, Micaela Vale, Piotr Domek, Jordi Delgado-Martín, Marija Gligora Udovič, Manthos Panou, Iveta Drastichova, Tina Elersek, Sven Teurlincx, Damian Chmura, Beata Messyasz, Arda Özen, Pedro M. Raposeiro, E. Emiel van Loon, Natalia Jakubowska-Krepska, Armand Hernández, Anna C. Santamans, Christine Edwards, Yang Yang, Pablo Urrutia-Cordero, Rodan Geriš, Victor C. Perello, Sevasti-Kiriaki Zervou, Hans W. Paerl, Alinne Gurjão de Oliveira, Mari Carmen Trapote, Marek Kruk, Tokat Gaziosmanpaşa Üniversitesi, Theoretical and Computational Ecology (IBED, FNWI), Freshwater and Marine Ecology (IBED, FNWI), Havran Meslek Yüksekokulu, CIIMAR - Centro Interdisciplinar de Investigação Marinha e Ambiental, Antoniou, Maria-Paraskevi, Giuliani, Gregory, Ibelings, Bastiaan Willem, European Cooperation in Science and Technology, Hernández, Armand, School of Biology, Aristotle University of Thessaloniki, Masaryk University [Brno] (MUNI), Lammi Biological Station (LBS), University of Helsinki, German Federal Environmental Agency / Umweltbundesamt (UBA), Limnological Institute, University of Konstanz, Fdn Edmund Mach, IASMA Research and Innovation Centre, Department of Biology, Faculty of Sciences, Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa (INESC-ID), Instituto Superior Técnico, Universidade Técnica de Lisboa (IST)-Instituto de Engenharia de Sistemas e Computadores (INESC), University of Strathclyde [Glasgow], Instituto Catalán de Investigación del Agua - ICRA (SPAIN) (ICRA), Mälardalen University (MDH), Freiburg Institute for Advanced Studies-LifeNet, Albert-Ludwigs-Universität Freiburg, Department of Computer Science and Engineering [San Diego] (CSE-UCSD), University of California [San Diego] (UC San Diego), University of California-University of California, Department of Environmental Sciences [Wageningen], Wageningen University and Research [Wageningen] (WUR), Environmental Sciences, Laboratoire Microorganismes : Génome et Environnement (LMGE), Université Clermont Auvergne [2017-2020] (UCA [2017-2020])-Centre National de la Recherche Scientifique (CNRS), Universitat de Barcelona, Fen Edebiyat Fakültesi, BAİBÜ, Mühendislik Fakültesi, Çevre Mühendisliği Bölümü, Karakaya, Nusret, Hernández, Armand [0000-0001-7245-9863], Hitit Üniversitesi, Fen Edebiyat Fakültesi, Biyoloji Bölümü, AKWA, Aquatic Ecology (AqE), Helsingin yliopisto = Helsingfors universitet = University of Helsinki, Department of Computer Science and Engineering [Univ California San Diego] (CSE - UC San Diego), and University of California (UC)-University of California (UC)
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Ecologia dels llacs ,Data Descriptor ,Water resources ,Aquatic Ecology and Water Quality Management ,thermocline ,010504 meteorology & atmospheric sciences ,vesien tila ,phytoplankton pigments ,010501 environmental sciences ,01 natural sciences ,Ecosystem services ,ympäristön tila ,BU Contaminants & Toxins ,Environmental monitoring ,Limnology ,lakes ,ddc:550 ,Canvi climàtic ,Geosciences, Multidisciplinary ,Survey ,ComputingMilieux_MISCELLANEOUS ,ddc:333.7-333.9 ,Climate-Change ,Europe Lakes ,Environmental resource management ,[Belirlenecek] ,Climate-change ecology ,plankton ,Eutrophication ,6. Clean water ,Computer Science Applications ,Europe ,Disparate system ,data ,international ,Bloom ,Statistics, Probability and Uncertainty ,Europa ,Environmental Monitoring ,Information Systems ,environmental variables ,Statistics and Probability ,Biological pigments ,Fitoplàncton ,Climate Change ,Cyanotoxins ,ta1172 ,BU Contaminanten & Toxines ,Climate change ,observation design ,Library and Information Sciences ,Cyanobacteria ,järvet ,Education ,European Multi Lake ,cyanotoxins ,ddc:570 ,Life Science ,Ecosystem ,14. Life underwater ,database creation objective ,syanobakteerit ,0105 earth and related environmental sciences ,WIMEK ,business.industry ,data analysis objective ,nutrient ,muuttujat ,Pigments, Biological ,15. Life on land ,Climatic changes ,dataset ,phytoplankton ,pigments ,mikrolevät ,Aquatische Ecologie en Waterkwaliteitsbeheer ,Environmental variables ,Phytoplankton pigments ,Multidisciplinär geovetenskap ,Climatic change ,Lakes ,13. Climate action ,Nutrient pollution ,Phytoplankton ,Environmental science ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,business ,Lake ecology ,Canvis climàtics ,Waters - Abstract
Under ongoing climate change and increasing anthropogenic activity, which continuously challenge ecosystem resilience, an in-depth understanding of ecological processes is urgently needed. Lakes, as providers of numerous ecosystem services, face multiple stressors that threaten their functioning. Harmful cyanobacterial blooms are a persistent problem resulting from nutrient pollution and climate-change induced stressors, like poor transparency, increased water temperature and enhanced stratification. Consistency in data collection and analysis methods is necessary to achieve fully comparable datasets and for statistical validity, avoiding issues linked to disparate data sources. The European Multi Lake Survey (EMLS) in summer 2015 was an initiative among scientists from 27 countries to collect and analyse lake physical, chemical and biological variables in a fully standardized manner. This database includes in-situ lake variables along with nutrient, pigment and cyanotoxin data of 369 lakes in Europe, which were centrally analysed in dedicated laboratories. Publishing the EMLS methods and dataset might inspire similar initiatives to study across large geographic areas that will contribute to better understanding lake responses in a changing environment., The authors acknowledge COST Action ES 1105 “CYANOCOST – Cyanobacterial blooms and toxins in water resources: Occurrence impacts and management” and COST Action ES 1201 “NETLAKE – Networking Lake Observatories in Europe” for contributing to this study through networking and knowledge sharing with European experts in the field. Evanthia Mantzouki was supported by a grant from the Swiss State Secretariat for Education, Research and Innovation (SERI) to Bas Ibelings and by supplementary funding from University of Geneva. We thank Wendy Beekman for the nutrient analysis and the University of Wageningen for covering the costs of this analysis from the personal funding of dr. Miquel Lürling. We thank Pieter Slot for assisting with the pigment analysis and the University of Amsterdam for covering the costs of the analysis through funding from the group of Prof. Jef Huisman and dr. Petra Visser (IBED). We would like to thank the Environmental Data Initiative for covering the cost of archiving the EMLS dataset. We would like to thank the Leibniz Institute of Freshwater Ecology and Inland Fisheries, Dept. of Experimental Limnology and the Aquatic Microbial Ecology Group for logistic and technical support of J. Fonvielle and H.-P. Grossart; and the Leibniz Association for financial support. The collection of data for Lough Erne and Lough Neagh were funded by the Department of Agriculture, Environment and Rural Affairs, Northern Ireland.
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- 2018
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15. Chroococcus minutus’un değişik stres koşullarında büyüme ve norharmaneüretim
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Omer Kayir, Zekeriya Altuner, Ramazan Erenler, Tunay Karan, Gaziosmanpaşa Üniversitesi, and 0-Belirlenecek
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0301 basic medicine ,Cyanobacteria ,Engineering, Chemical ,[Anahtar Kelime Yok] ,Chromatography ,biology ,Chemistry ,Chroococcus minutus ,General Medicine ,biology.organism_classification ,01 natural sciences ,High-performance liquid chromatography ,Thin-layer chromatography ,Mühendislik, Kimya ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,03 medical and health sciences ,030104 developmental biology ,Fresh water ,Stress conditions ,Biology ,Chroococcus minutus,cyanobacteria,HPLC,norharmane ,Biyoloji - Abstract
Cyanobacterium samples were collected from fresh water of Tokat city in Turkey, and then isolation and cultivation of Chroococcus minutus were achieved successfully. TLC (Thin layer chromatography) and HPLC (High Performance Liquid Chromatography) analyses revealed that the C. minutus consisted of norharmane as a major product. So amount of norharmane was determined during the growth process. Growth and norharmane production of C. minutus were executed under salt stress and pH stress conditions. The most growth and the highest production of norharmane were detected at 16th day. Therefore inoculation process was performed at 16th day. Salt stress was evaluated at 0.5, 1.0, 3.0 and 5.0 M concentrations. The most norharmane was synthesized by C. minutus at 5 M concentration. The norharmane production and the growth were higher at pH 9 than that of the pH 5. Most norharmane was produced at pH 7. Siyanobakteri örnekleriTürkiyede Tokat şehrinintatlı sulardan toplandı ve Chroococcus minutus’un isolasyonu ve kültürü başarılı bir şekilde gerçekleştirildi. İTK (İnce tabaka kromatografisi) ve HPLC (Yüksek basınçlı sıvı kromatografisi) analizleri Chroococcus minutus’un ana ürün olarak norharman içerdiğini gösterdi. Böylece C. minutus’ungelişim döneminde norharman miktarı belirlendi. Tuz stresi ve pH stresi şartlarındaChroococcus minutus’un gelişimi ve norharman üretimi belirlendi. En fazla büyüme ve en çok norharman üretimi 16. günde gözlendi. Bu bakımdan inokulasyon işlemi 16. günde gerçekleştirildi. Tuz stresi 0.5, 1.0, 3.0 ve 5.0 M konsantrasyonlarında gerçekleştirildi. En fazla norharman 5M konsantrasyonunda C. minutustarafından sentezlendi. Norharman üretimi ve büyüme pH 5’ teki şartlaragöre pH 9’ da daha yüksekti. En fazla norharman üretimi pH 7’ de gerçekleşti.
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- 2018
16. Inhibition of Various Cancer Cells Proliferation of Bornyl Acetate and Essential Oil from Inula graveolens (Linnaeus) Desf
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Ramazan Erenler, Ali Aydın, Tunay Karan, Ilyas Yildiz, Gaziosmanpaşa Üniversitesi, and 0-Belirlenecek
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Plant Science ,01 natural sciences ,essential oil ,law.invention ,lcsh:Chemistry ,lcsh:QD241-441 ,Inula graveolens ,lcsh:Organic chemistry ,law ,lcsh:Botany ,Drug Discovery ,antitumor activity ,Essential oil ,Pharmacology ,[Anahtar Kelime Yok] ,Inula ,Traditional medicine ,biology ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,biology.organism_classification ,0104 chemical sciences ,lcsh:QK1-989 ,010404 medicinal & biomolecular chemistry ,lcsh:QD1-999 ,Cancer cell ,Bornyl acetate - Abstract
Inula species are medicinal and aromatic plants used for folk medicine extensively. In this work, hydrodistilled essential oil of Inula graveolens (Linnaeus) Desf. analyzed by GC-MS which revealed that bornyl acetate was the major product (69.15%). Camphene was the second major compound (11.11%). Antiproliferative activity of the essential oil and bornyl acetate was investigated on HeLa (human cervix carcinoma), HT29 (human colon carcinoma) , A549 (human lung carcinoma), MCF7 ( human breast adenocarcinoma) cancer cells and FL (human amnion cells) normal cells. The cytotoxicity was executed by a Lactate Dehydrogenase (LDH) Cytotoxicity Detection Kit. Essential oil and bornyl acetate displayed the outstanding activities on HeLa (IC 50, 64.1, 72.0 µg/mL), HT29 (IC 50, 24.6, 60.5 µg/mL), A549 (IC 50, 28.3, 44.1 µg/mL), MCF-7 (IC 50, 66.5, 85.6 µg/mL), and FL (IC 50, 42.1, 50.6 µg/mL) cell lines respectively.
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- 2018
17. Theoretical Study on Flavonoids Isolated from Allium vineale
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Ramazan Erenler, Tunay Karan, and Faik Gökalp
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biology ,Chemistry ,Basic Sciences ,Temel Bilimler ,Activity,flavonoids,theoretical calculation ,Allium ,Aktivite,flavonoidler,teorik hesaplamalar ,General Medicine ,biology.organism_classification ,Molecular biology - Abstract
Allium vineale’dan izole edilenkiseriol-7-O-[2''-O-E-ferulil]-β-D-glukosit(1), kiseriol (2) ve isorhamnetin-3- β-D-glukosit(3) bileşiklerinin kimyasal özellikleri teorik olarak araştırıldı. Bubileşiklerin kimyasal özellikleri hesaplanırken RHF/STO-3G metodu kullanıldı.Bileşiklerin optimizasyonu ve sonuçların değerlendirilmesi bu metodlagerçekleştirildi. Bileşiklerin özellikleri ortaya kondu, ayrıca teorik vedeneysel sonuçların karşılaştırılması ile ilgili bileşiklerin değişikalanlardaki kullanımları araştırıldı. Bileşiklerin antioksidan özellikleri dahaönce rapor edildi. Hesaplamalar, kiseriol (2)bileşiğinin kararsız ve radikal bileşiklerle tepkime verme eğiliminde olduğunugösterdi. Özetle, antioksidan bileşikler radikal bileşiklere kolaylıklahidrojen vermektedir., The chemical properties of chrysoeriol-7-O-[2''-O-E-feruloyl]-β-D-glucoside(1), chrysoeriol (2), and isorhamnetin-3-β-D-glucoside (3) from Allium vinealehave been investigated as theoretical. RHF/STO-3G method was used for quantumcalculations of chemical properties of these compounds. The structures of thecompounds were fully optimized and then the results were evaluated by thismethod. The properties of compounds were presented and the utilization of thesecompounds in various fields was investigated by comparison of theoreticalresults with experimental ones. The experimental antioxidant effects werereported previously. The quantum calculations revealed that chrysoeriol (2) was unstable and was prone to reactto the radical compounds. In brief, a good antioxidant can donate the electronto the radical compound easily.
- Published
- 2017
18. Screening of Norharmane from Seven Cyanobacteria by High-performance Liquid Chromatography
- Author
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Tunay Karan and Ramazan Erenler
- Subjects
0301 basic medicine ,Cyanobacteria ,biology ,Chemistry ,Cultivation ,030106 microbiology ,Pharmaceutical Science ,Chroococcus minutus ,biology.organism_classification ,High-performance liquid chromatography ,cyanobacteria ,University campus ,03 medical and health sciences ,030104 developmental biology ,Drug Discovery ,Nostoc linckia ,Botany ,Original Article ,Anabaena oryzae ,high-performance liquid chromatography ,Oscillatoria limnetica ,Cylindrospermum ,norharmane - Abstract
Background Cyanobacteria, including pharmaceutically and medicinally valuable compounds attract the great attention lately. Norharmane (9H-pyrido (3,4-b) indole found in some cyanobacteria revealed a great number of biological effects. Objective Seven cyanobacteria were isolated and identified from Yesilirmak River and Gaziosmanpasa University Campus to determine the norharmane content. Materials and methods Cyanobacteria collected from Tokat, Turkey were isolated and identified by morphologically. Norharmane (9H-pyrido [3,4-b] indole) quantities were presented for seven cyanobacteria, Chroococcus minutus (Kutz.) Nageli, Geitlerinema carotinosum (Geitler) Anagnostidis, Nostoc linckia Bornet ex Bornet and Flahault, Anabaena oryzae F. E. Fritsch, Oscillatoria limnetica Lemmermann, Phormidium sp. Kutzing ex Gomont, and Cylindrospermum sp. Kutzing ex E. Bornet and C. Flahault by high-performance liquid chromatography. Results The norharmane amount indicated for cyanobacterial culture media altered in a species-dependent kind in the range of 0.81-10.87 μg/g. C. minutus produced the most norharmane among the investigated cyanobacteria as 10.87 μg/g. Conclusion Cyanobacteria could be an important source of norharmane as well as pharmaceutically valuable compounds. Summary Seven cyanobacteria were isolated and identified from Yesilirmak RiverQuantitative analysis of norharmane was executed on isolated cyanobacteriaFour cyanobecteria species included the norharmaneChroococcus minutus contained the most norharmane (10.87 μg/g). Abbreviations used: HPLC: High performance liquid chromatograph.
- Published
- 2017
19. Inhibitory Effect of 6,7-dimethoxy-5-hydroxyflavone on Human Cervix Carcinoma in Vitro
- Author
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Ibrahim Demirtas, Tunay Karan, Ramazan Erenler, Muhammed Altun, Fatih Gul, Gaziosmanpaşa Üniversitesi, and 0-Belirlenecek
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flavone ,Biophysics ,Ethyl acetate ,Kickxia spuria ,Plant Science ,lcsh:Plant culture ,01 natural sciences ,Biochemistry ,lcsh:Agriculture ,HeLa ,chemistry.chemical_compound ,Column chromatography ,Kickxia spuria,flavone,HeLa ,lcsh:SB1-1110 ,Biology ,Chromatography ,biology ,010405 organic chemistry ,lcsh:S ,Rotary evaporator ,biology.organism_classification ,In vitro ,0104 chemical sciences ,Solvent ,010404 medicinal & biomolecular chemistry ,kickxia spuria ,chemistry ,Cell culture ,hela ,Biyoloji ,Biotechnology - Abstract
Natural products derived from plants play a significant role in drug discovery due to the revealing a large variety of pharmaceutical effects. Kickxia spuriawas collected from Bingol, Turkey. Aerial parts of the plant were boiled in water for 2 h then extracted with ethyl acetate. After evaporation of the solvent by rotary evaporator, the extract was subjected to column chromatography to yield the compound identified as 6,7-dimethoxy-5-hydroxyflavone by spectroscopic method including 1D-, 2D-NMR, LC-TOF/MS. Antiproliferative activity of isolated compound was tested against HeLa (human cervix carcinoma) cell lines by xCELLigence assay, and found out that the compound exhibited excellent activity., Naturalproducts derived from plants play a significant role in drug discovery due tothe revealing a large variety of pharmaceutical effects. Kickxia spuriawas collected from Bingol, Turkey. Aerial parts ofthe plant were boiled in water for 2 h then extracted with ethyl acetate. Afterevaporation of the solvent by rotary evaporator, the extract was subjected tocolumn chromatography to yield the compound identified as 6,7-dimethoxy-5-hydroxyflavone byspectroscopic method including 1D-, 2D-NMR, LC-TOF/MS. Antiproliferativeactivity of isolated compound was tested against HeLa (human cervix carcinoma)cell lines by xCELLigence assay, and found out that the compound exhibitedexcellent activity.
- Published
- 2017
20. Fatty acid constituents and anticancer activity of Cladophora fracta (OF Müller ex Vahl) Kützing
- Author
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Ramazan Erenler and Tunay Karan
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0106 biological sciences ,chemistry.chemical_classification ,0303 health sciences ,Cell growth ,010604 marine biology & hydrobiology ,Linoleic acid ,Pharmaceutical Science ,Fatty acid ,01 natural sciences ,Palmitic acid ,03 medical and health sciences ,chemistry.chemical_compound ,Oleic acid ,chemistry ,Lactate dehydrogenase ,Vero cell ,Pharmacology (medical) ,Food science ,Cytotoxicity ,030304 developmental biology - Abstract
Purpose: To determine the fatty acid constituents and anticancer effect of Cladohora fracta Methods: Cladophora fracta (O.F. Muller ex Vahl) Kutzing was collected from natural ponds in Tokat, Turkey. Antiproliferative and cytotoxic effects of methanol and hexane extracts of C. fracta were investigated on human colon carcinoma (HT29) and non-tumorigenic African green monkey kidney (Vero) cell lines using BrdU cell proliferation enzyme-linked Immunosorbent assay (ELISA) and lactate dehydrogenase (LDH) test, respectively. The fatty acid composition of hexane extract was analyzed by gas chromatography-mass spectrometry (GC-MS). Results: Oleic acid, palmitic acid, gamma-linoleic acid and linoleic acid were the main constituents of C. fracta . The methanol extract exhibited strong antiproliferative activity on HT29 and Vero cell lines ( p < 0.05). The hexane extract revealed its good antiproliferative activity at high concentrations on both cell lines. Cytotoxicity results showed that both methanol and hexane extract had low effect on HT29 cell at low concentrations. Conclusion: Due to the strong antiproliferative effect of C. fracta methanol extract on HT29 and Vero cell lines, it has potential anticancer properties and recommended for further development as such. Keywords: Cladophora fracta , Antiproliferative activity, Anti-cancer, Cytotoxic effect, Fatty acid
- Published
- 2019
- Full Text
- View/download PDF
21. Farklı Gün Uygulamalarının Bazı Siyanobakterilerde Norharman Üretimi Üzerine Etkisi
- Author
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Tunay Karan, Zekeriya Altuner, İnanç Baral, Taner Daştan, Gaziosmanpaşa Üniversitesi, 0-Belirlenecek, and Sivas Cumhuriyet Üniversitesi
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0301 basic medicine ,[Anahtar Kelime Yok] ,Metabolite ,Mühendislik ,Chroococcus minutus ,General Medicine ,Biology ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,chemistry ,lcsh:TA1-2040 ,Botany ,Nostoc linckia ,Ortak Disiplinler ,Stress conditions ,Food science ,Anabaena oryzae ,Geitlerinema carotinosum ,lcsh:Engineering (General). Civil engineering (General) ,lcsh:Science (General) ,lcsh:Q1-390 - Abstract
Siyanobakteriler, metabolizmalarından ötürü biyolojik, ekolojik ve ekonomik bakımdan önemli bakterilerdir. Özellikle çeşitli olumsuz şartlarda üretilmiş ve her biri özelleşmiş fonksiyonlara sahip bir dizi sekonder metabolit içerirler. Antibakteriyel, antikanser gibi biyolojik etkili ve ilaç olarak kullanılabilen metabolitlerden biri; 9H-Pyrido [3,4-b] indole yapısında Norharman'dır. Bu çalışmada Yeşilırmak Nehri (Tokat)'nden su örnekleri alınarak inverted mikroskop altında mikropipet ve mikro enjektör yardımıyla izole edilen siyanobakteriler ortalama bir aylık kültüre alınmıştır. Belirli zaman aralığında kültürlerden alınarak ürettikleri norharman miktarı HPLC ile tespit edilmiştir. Chroococcus minutus ve Anabaena oryzae' de sırasıyla 8.8167, 0.712 µg/g norharman 16. günde maksimum olarak üretilmiştir. Nostoc linckia'da en fazla norharman üretimi 1.191 µg/g olup 20. gündedir. Geitlerinema carotinosum'da ise diğer türlere göre daha erken logaritmik faza girdiği 12. günde maksimum norharman metaboliti 0.825µg/g olarak üretilmiştir., Cyanobacteria are an important class of bacteria by their metabolic activities for biology, ecology and economy. They contain series of secondary metabolites produced under negative stress conditions and providing specialized functions. One of the metabolites which is biologically active and can be used as drug for antibacterial and antitumor properties is norharman which has (9H-pyrido 3, 4-b) indole structure. In this study, water samples were collected from Yesilirmak river of Tokat province of Turkey and cyanobacteria were isolated under inverted microscope by micropipette and microinjection and were cultured for a month. Selection from cultures was done during predetermined time courses and produced norharman levels were determined by HPLC. At 16th day maximum norharman production was determined as 8.8167 and 0.712 µg/g from Chroococcus minitus and Anabaena oryzae respectively. Highest norharman production from Nostoc linckia determined as 1.191 µg/g at 20th day. Since Geitlerinema carotinosum began exponential growth phase faster than other strains the highest amount of norharman production was determined as 0.825 µg/g at 12th day.
- Published
- 2016
22. Phenylthiocarbamide taste perception as a possible genetic association marker for nutritional habits and obesity tendency of people
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SevgiDurna, Dastan, Naci, Degerli, Taner, Dastan, Fazilet, Yildiz, Yavuz, Yildir, Yusuf Muhammed, Durna, Dilek, Atessahin, and Tunay, Karan
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Adult ,Genetic Markers ,Male ,Adolescent ,Turkey ,Age Factors ,Nutritional Status ,Taste Perception ,Feeding Behavior ,Middle Aged ,Phenylthiourea ,Weight Gain ,Body Mass Index ,Young Adult ,Phenotype ,Sex Factors ,Risk Factors ,Humans ,Female ,Genetic Predisposition to Disease ,Obesity ,Genetic Association Studies ,Aged - Abstract
Ability to taste Phenylthiocarbamide (PTC) a bitter molecule, is usually used to know the heritable characteristic in both genetic and physiological studies. So far, no research has yet attested whether PTC blindness relation with obesity and some nutrition behaviors of human. This study is the first attempt on a large scale to examine PTC sensitivity in healthy and overweight people in Turkish population to define in the perception of bitter senses which is associated with nutrition habits, body mass index, age, gender, and to be in stable weight. PTC taste perception was measured by tasting PTC solution filtered in a paper. The results showed that tasters were significantly more frequent (81,8%) than nontasters (18,2%) in all population. A higher proportion of nontasters were observed in the quite fat individual group (BMI40kg/m(2)). Alterations explained these differences in basic taste sensitivity, age, gender, BMI, individuals' family obesity situations, vegetarian nourishment. Increased frequency of nontasters allele is evident with obesity condition. This could be due to lack of preference for nutrition among nontasters. So the phenotypic variation in PTC sensitivity is genetic in origin; it may represent an association with obesity, dietary habits, regular weight, gender, and age.
- Published
- 2015
23. Crimean-Congo hemorrhagic fever virus in Ixodid ticks in Tokat Province of Turkey
- Author
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Tunay Karan, Ahmet Bursali, Mustafa Ekici, and Şaban Tekin
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Bioengineering ,General Medicine ,Biology ,Applied Microbiology and Biotechnology ,Virology ,Crimean Congo hemorrhagic fever virus ,Biotechnology - Published
- 2012
- Full Text
- View/download PDF
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