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With the rapid advancements in sequencing technology, an increasing number of genome sequences for medicinal plants have become available. In 2021, TCMPG was introduced as a comprehensive database dedicated to traditional Chinese medicine (TCM) plant genomes, capturing significant attention within the scientific community. To offer invaluable resources to researchers, this database received an upgrade to its latest version, named TCMPG 2.0, accessible at http://cbcb.cdutcm.edu.cn/TCMPG2/. TCMPG 2.0 surpasses its predecessor by adding 114 medicinal plants, 129 genomes, and 159 related herbs. Recognizing the critical role of ingredients in assessing the pharmacological effects of Chinese medicines, TCMPG 2.0 has also amassed data on 13,868 herbal ingredients. Additionally, four practical analytical tools, including Heatmap, Primer3, PlantiSMASH, and CRISPRCasFinder, have been integrated into the toolbox. These valuable enhancements significantly enhance the database's utility for researchers in the field.

Biochar (BC) is widely used in the remediation of soil and wastewater polluted by heavy metals, but there are few reports on the characteristics of biochar derived via pyrolysis from different traditional Chinese medicine residues (TCMRs). In this study, biochars were prepared by slow pyrolysis of five common Chinese medicine residues, namely, Salvia miltiorrhiza (DNS), Ligusticum striatum (CX), Angelica sinensis (DG), Codonopsis pilosula (DGS), and Astragalus membranaceus (HQ). The biochars were systematically investigated by determining their physicochemical properties and using common characterization techniques. The Spearman correlation matrix between factors was used to examine relationships between properties of different biochars. Batch adsorption experiments were carried out to investigate the adsorption characteristics of biochar on Pb(II) and the mechanisms involved. The results showed that the physicochemical properties and adsorption performance of biochar were related to the type of its pharmaceutical residue. Biochar produced from materials with higher lignin content showed a better adsorption of the heavy metal Pb(II). All biochars were alkaline, with yields ranging from 29.30 to 38.65 %, and the main structure comprised of mesopores and macropores. The FT-IR and Boehm experiments revealed that the various TCMR biochars contained comparable functional groups, but their content varied. XRD and TEM results show that all biochar is amorphous with a crystalline structure, with the surface dominated by cellulose crystals and graphitic carbon. The O/C ratio ( 0.99), and their isotherms were consistent with the Langmuir model (R2 > 0.99), indicating a monolayer chemisorption process. The biochar samples exhibited varying adsorption capacities for Pb(II), with the highest capacity observed for BDNS (36.42 mg/g). The adsorption mechanism mainly involved precipitation, complexation with oxygen-containing functional groups, and ion exchange. This study indicates that biochars from herbal residues exhibit promising potential for adsorbing heavy metal Pb(II), suggesting biochar production as a viable method for recycling herbal residues.

Abstract Background Agarwood, generated from the Aquilaria sinensis, has high economic and medicinal value. Although its genome has been sequenced, the ploidy of A. sinensis paleopolyploid remains unclear. Moreover, the expression changes of genes associated with agarwood formation were not analyzed either. Results In the present work, we reanalyzed the genome of A. sinensis and found that it experienced a recent tetraploidization event ~ 63–71 million years ago (Mya). The results also demonstrated that the A. sinensis genome had suffered extensive gene deletion or relocation after the tetraploidization event, and exhibited accelerated evolutionary rates. At the same time, an alignment of homologous genes related to different events of polyploidization and speciation were generated as well, which provides an important comparative genomics resource for Thymelaeaceae and related families. Interestingly, the expression changes of genes related to sesquiterpene synthesis in wounded stems of A. sinensis were also observed. Further analysis demonstrated that polyploidization promotes the functional differentiation of the key genes in the sesquiterpene synthesis pathway. Conclusions By reanalyzing its genome, we found that the tetraploidization event shaped the A. sinensis genome and contributed to the ability of sesquiterpenes synthesis. We hope that these results will facilitate our understanding of the evolution of A. sinensis and the function of genes involved in agarwood formation.

In order to devise more effective penetration enhancers, 4-O-acylterpineol derivatives which were expected to be hydrolyzed into nontoxic metabolites by esterase in the living epidermis, were synthesized from 4-terpineol (4-TER) enantiomers and straight chain fatty acids. Their promoting activities on the SR-flurbiprofen and its enantiomers were tested across full-thickness rabbit skin, as well as to correlate under in vitro and in vivo conditions. The permeation studies indicated that both d-4-O-acylterpineol and l-4-O-acylterpineol had significant enhancing effects, interestingly, d-4-O-aclyterpineol had higher enhancing effects than l-4-O-aclyterpineol with the exception of d-4-methyl-1-(1-methylethyl)-3-cyclohexen-1-yl octadec-9-enoate (d-4-T-dC18). The mechanism of 4-O-acylterpineol facilitating the drug penetration across the skin was confirmed by Attenuated total reflection-Fourier transformed infrared spectroscopy (ATR-FTIR) and molecular simulation. The mechanism of penetration enhancers promoting drug release was explored by the in vitro release experiment. Finally, a relative safety skin irritation of enhancers was also investigated by in vivo histological evaluation. The present research suggested that d-4-O-aclyterpineol and l-4-O-aclyterpineol could significantly promote the penetration of SR-flurbiprofen and its enantiomers both in vitro and in vivo, with the superiorities of high flux and low dermal toxicity.

The present study aimed to evaluate the penetration activity of O-acylterpineol derivatives both in vitro and in vivo, and to investigate the enhancing mechanism of O-acylterpineol derivatives which were synthesized by α-terpineol and fatty acid. The promoting activities on the isosorbide dinitrate patch were tested across full thickness rabbit skin both in vitro and in vivo. In order to elucidate the permeation mechanism, attenuated total reflection Fourier transform infrared spectroscopy, molecular modeling, and confocal laser scanning microscopy were introduced to investigate the regulation of enhancers in the skin permeability and biophysical properties. With in vitro cytotoxicity test and in vivo erythema model, the skin irritation of enhancers was also evaluated. Permeation studies showed 2-(4-methylcyclohex-3-en-l-yl) propan-2-yl tetradecanoate produced the obvious enhancement activity for ISDN both in vitro and in vivo from patches. These results were supported by ATR-FTIR, molecular modeling, and CLSM studies which revealed that O-acylterpineol could decrease the order of the alkyl chains in the skin lipids. Additionally, it was found that TER-C14 produced a relatively low skin irritation, compared with the TER which was assumed to be a safe compound. The present research suggested that some newly designed acylterpineol derivatives are shown to be suitable permeation enhancers for transdermal drug delivery, and the chain length of C14 seem to be safe and more favorable for the penetration of ISDN from DIA patches.