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TCMPG 2.0: an enhanced database of traditional Chinese medicine plant genomes

Authors :
Fanbo Meng
Tianzhe Chu
Lianjiang Hu
Mengqing Zhang
Qian Cheng
Xiuping Yang
Zhuo Liu
Yuannong Ye
Xiaoming Song
Wei Chen
Source :
Medicinal Plant Biology, Vol 3, Iss 1, Pp 1-5 (2024)
Publication Year :
2024
Publisher :
Maximum Academic Press, 2024.

Abstract

With the rapid advancements in sequencing technology, an increasing number of genome sequences for medicinal plants have become available. In 2021, TCMPG was introduced as a comprehensive database dedicated to traditional Chinese medicine (TCM) plant genomes, capturing significant attention within the scientific community. To offer invaluable resources to researchers, this database received an upgrade to its latest version, named TCMPG 2.0, accessible at http://cbcb.cdutcm.edu.cn/TCMPG2/. TCMPG 2.0 surpasses its predecessor by adding 114 medicinal plants, 129 genomes, and 159 related herbs. Recognizing the critical role of ingredients in assessing the pharmacological effects of Chinese medicines, TCMPG 2.0 has also amassed data on 13,868 herbal ingredients. Additionally, four practical analytical tools, including Heatmap, Primer3, PlantiSMASH, and CRISPRCasFinder, have been integrated into the toolbox. These valuable enhancements significantly enhance the database's utility for researchers in the field.

Details

Language :
English
ISSN :
28356969
Volume :
3
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Medicinal Plant Biology
Publication Type :
Academic Journal
Accession number :
edsdoj.2ac53472e12479399ab4b207bddc573
Document Type :
article
Full Text :
https://doi.org/10.48130/mpb-0024-0004