57 results on '"Sweeney EL"'
Search Results
2. gyrA Mutations in Mycoplasma Genitalium and Their Contribution to Moxifloxacin Failure: Time for the Next Generation of Resistance-guided Therapy
- Author
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Murray, GL, Plummer, EL, Bodiyabadu, K, Vodstrcil, LA, Huaman, JL, Danielewski, JA, Chua, TP, Machalek, DA, Garland, S, Doyle, M, Sweeney, EL, Whiley, DM, Bradshaw, CS, Murray, GL, Plummer, EL, Bodiyabadu, K, Vodstrcil, LA, Huaman, JL, Danielewski, JA, Chua, TP, Machalek, DA, Garland, S, Doyle, M, Sweeney, EL, Whiley, DM, and Bradshaw, CS
- Abstract
BACKGROUND: Although single nucleotide polymorphisms (SNPs) in Mycoplasma genitalium parC contribute to fluoroquinolone treatment failure, data are limited for the homologous gene, gyrA. This study investigated the prevalence of gyrA SNPs and their contribution to fluoroquinolone failure. METHODS: Samples from 411 patients (male and female) undergoing treatment for M. genitalium infection (Melbourne Sexual Health Centre, March 2019-February 2020) were analyzed by Sanger sequencing (gyrA and parC). For patients treated with moxifloxacin (n = 194), the association between SNPs and microbiologic treatment outcome was analyzed. RESULTS: The most common parC SNP was G248T/S83I (21.1% of samples), followed by D87N (2.3%). The most common gyrA SNP was G285A/M95I (7.1%). Dual parC/gyrA SNPs were found in 8.6% of cases. One third of infections harboring parC G248T/S83I SNP had a concurrent SNP in gyrA conferring M95I. SNPs in gyrA cooccurred with parC S83I variations. Treatment failure was higher in patients with parC S83I/gyrA dual SNPs when compared with infections with single S83I SNP alone from analysis of (1) 194 cases in this study (81.2% vs 45.8%, P = .047), and (2) pooled analysis of a larger population of 535 cases (80.6% vs 43.2%; P = .0027), indicating a strong additive effect. CONCLUSIONS: Compared with parC S83I SNP alone, M. genitalium infections with dual mutations affecting parC/gyrA had twice the likelihood of failing moxifloxacin. Although antimicrobial resistance varies by region globally, these data indicate that gyrA should be considered as a target for future resistance assays in Australasia. We propose a strategy for the next generation of resistance-guided therapy incorporating parC and gyrA testing.
- Published
- 2023
3. Mycoplasma genitalium: enhanced management using expanded resistance-guided treatment strategies
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Sweeney, EL, Whiley, DM, Murray, GL, Bradshaw, CS, Sweeney, EL, Whiley, DM, Murray, GL, and Bradshaw, CS
- Abstract
Mycoplasma genitalium is an emerging sexually transmitted bacterium that is gaining attention because of the impact escalating antimicrobial resistance (AMR) is having on patient management. Of additional concern is that increased availability of testing appears to be resulting in screening practices that are not supported by clinical guidelines. This results in increasing numbers of asymptomatic M. genitalium infections being identified, which when combined with AMR issues, creates significant challenges for patients and clinicians. Rapidly rising levels of AMR, coupled with limited alternative treatment options, means patients can enter cycles of complex antimicrobial regimens that may cause more harm than the infection itself. In this review, we discuss the emergence of AMR and the implication for treatment practices, highlight the recommendations for testing but not screening for M. genitalium , and discuss expansion of individualised treatment strategies, to curb the emergence of resistance and improve outcomes for patients. We also provide suggestions for future research on the transmission and spread of resistance, to enhance global surveillance of this antimicrobial resistant pathogen and inform the revision of local and international treatment strategies.
- Published
- 2022
4. Novel probe-based melting curve assays for the characterization of fluoroquinolone resistance in Mycoplasma genitalium
- Author
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Tickner, JA, Bradshaw, CS, Murray, GL, Whiley, DM, Sweeney, EL, Tickner, JA, Bradshaw, CS, Murray, GL, Whiley, DM, and Sweeney, EL
- Abstract
BACKGROUND: Mycoplasma genitalium infection is a sexually transmitted infection that has rapidly become resistant to mainstay treatments. While individualized treatment approaches have been recommended and adopted for macrolides, individualized therapy for fluoroquinolones has not yet been explored, due to a lack of commercial molecular assays and a lack of confidence in specific mutations associated with resistance. In another recent study, we defined a clear role and diagnostic utility in focusing on the absence of resistance mutations to inform microbial cure with fluoroquinolone antimicrobials. METHODS: We developed two proof-of-concept molecular tests that focus on detection of M. genitalium and characterization of WT parC sequences that are strongly linked to fluoroquinolone susceptibility. RESULTS: We screened a total of 227 M. genitalium-positive samples using novel molecular beacon and dual hybridization probe assays. These assays were able to detect M. genitalium and characterize fluoroquinolone susceptibility in 143/227 (63%) samples, based on clear differences in melting peak temperatures. The results of these molecular assays were in 100% agreement with 'gold standard' Sanger sequencing. Additionally, WT parC sequences were readily distinguished from M. genitalium samples harbouring parC mutations of known or suspected clinical significance. The ability of the assays to successfully characterize fluoroquinolone susceptibility and resistance was reduced in low M. genitalium load samples. CONCLUSIONS: These proof-of-concept assays have considerable potential to improve individualized treatment approaches and rationalize tests of cure for M. genitalium infection. The ability to initiate individualized treatment in up to two-thirds of cases will enhance antimicrobial stewardship for this challenging pathogen.
- Published
- 2022
5. parC Variants in Mycoplasma genitalium: Trends over Time and Association with Moxifloxacin Failure
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Murray, GL, Bodiyabadu, K, Vodstrcil, LA, Machalek, DA, Danielewski, J, Plummer, EL, Garland, SM, Whiley, DM, Sweeney, EL, Bradshaw, CS, Murray, GL, Bodiyabadu, K, Vodstrcil, LA, Machalek, DA, Danielewski, J, Plummer, EL, Garland, SM, Whiley, DM, Sweeney, EL, and Bradshaw, CS
- Abstract
Prevalence, trends, and treatment outcome estimates were generated for parC variants in macrolide-resistant Mycoplasma genitalium. Among 539 cases, the most common amino acid change was S83I, which increased from 13% in 2012 to 2013, to 23% in 2019 to 2020 (Ptrend = 0.046). From 381 moxifloxacin treatments, failure occurred in 58.7% (95% confidence interval [CI], 46.7 to 69.9) of cases with S83I. Other changes affecting S83 or D87 were uncommon and minor contributors to failure. The absence of S83I was highly predictive of moxifloxacin cure (96.4%; 95% CI, 93.7 to 98.2), highlighting diagnostic potential.
- Published
- 2022
6. Global phylogeny of Treponema pallidum lineages reveals recent expansion and spread of contemporary syphilis
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Beale, MA, Marks, M, Cole, MJ, Lee, M-K, Pitt, R, Ruis, C, Balla, E, Crucitti, T, Ewens, M, Fernandez-Naval, C, Grankvist, A, Guiver, M, Kenyon, CR, Khairullin, R, Kularatne, R, Arando, M, Molini, BJ, Obukhov, A, Page, EE, Petrovay, F, Rietmeijer, C, Rowley, D, Shokoples, S, Smit, E, Sweeney, EL, Taiaroa, G, Vera, JH, Wenneras, C, Whiley, DM, Williamson, DA, Hughes, G, Naidu, P, Unemo, M, Krajden, M, Lukehart, SA, Morshed, MG, Fifer, H, Thomson, NR, Beale, MA, Marks, M, Cole, MJ, Lee, M-K, Pitt, R, Ruis, C, Balla, E, Crucitti, T, Ewens, M, Fernandez-Naval, C, Grankvist, A, Guiver, M, Kenyon, CR, Khairullin, R, Kularatne, R, Arando, M, Molini, BJ, Obukhov, A, Page, EE, Petrovay, F, Rietmeijer, C, Rowley, D, Shokoples, S, Smit, E, Sweeney, EL, Taiaroa, G, Vera, JH, Wenneras, C, Whiley, DM, Williamson, DA, Hughes, G, Naidu, P, Unemo, M, Krajden, M, Lukehart, SA, Morshed, MG, Fifer, H, and Thomson, NR
- Abstract
Syphilis, which is caused by the sexually transmitted bacterium Treponema pallidum subsp. pallidum, has an estimated 6.3 million cases worldwide per annum. In the past ten years, the incidence of syphilis has increased by more than 150% in some high-income countries, but the evolution and epidemiology of the epidemic are poorly understood. To characterize the global population structure of T. pallidum, we assembled a geographically and temporally diverse collection of 726 genomes from 626 clinical and 100 laboratory samples collected in 23 countries. We applied phylogenetic analyses and clustering, and found that the global syphilis population comprises just two deeply branching lineages, Nichols and SS14. Both lineages are currently circulating in 12 of the 23 countries sampled. We subdivided T. p. pallidum into 17 distinct sublineages to provide further phylodynamic resolution. Importantly, two Nichols sublineages have expanded clonally across 9 countries contemporaneously with SS14. Moreover, pairwise genome analyses revealed examples of isolates collected within the last 20 years from 14 different countries that had genetically identical core genomes, which might indicate frequent exchange through international transmission. It is striking that most samples collected before 1983 are phylogenetically distinct from more recently isolated sublineages. Using Bayesian temporal analysis, we detected a population bottleneck occurring during the late 1990s, followed by rapid population expansion in the 2000s that was driven by the dominant T. pallidum sublineages circulating today. This expansion may be linked to changing epidemiology, immune evasion or fitness under antimicrobial selection pressure, since many of the contemporary syphilis lineages we have characterized are resistant to macrolides.
- Published
- 2021
7. A retrospective pilot study to determine whether the reproductive tract microbiota differs between women with a history of infertility and fertile women
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Wee, BA, Thomas, M, Sweeney, EL, Frentiu, FD, Samios, M, Ravel, J, Gajer, P, Myers, G, Timms, P, Allan, JA, Huston, WM, Wee, BA, Thomas, M, Sweeney, EL, Frentiu, FD, Samios, M, Ravel, J, Gajer, P, Myers, G, Timms, P, Allan, JA, and Huston, WM
- Abstract
© 2017 The Royal Australian and New Zealand College of Obstetricians and Gynaecologists Background: We know very little about the microbiota inhabiting the upper female reproductive tract and how it impacts on fertility. Aims: This pilot study aimed to examine the vaginal, cervical and endometrial microbiota for women with a history of infertility compared to women with a history of fertility. Materials and methods: Using a retrospective case–control study design, women were recruited for collection of vaginal, cervical and endometrial samples. The microbiota composition was analysed by 16S ribosomal RNA (rRNA) gene amplification and endometrial expression of selected human genes by quantitative reverse transcription polymerase chain reaction. Results: Sixty-five specimens from the reproductive tract of 31 women were successfully analysed using 16S rRNA gene amplicon sequencing (16 controls and 15 cases). The dominant microbial community members were consistent in the vagina and cervix, and generally consistent with the endometrium although the relative proportions varied. We detected three major microbiota clusters that did not group by tissue location or case–control status. There was a trend that infertile women more often had Ureaplasma in the vagina and Gardnerella in the cervix. Testing for the expression of selected genes in the endometrium did not show evidence of correlation with case–control status, or with microbial community composition, although Tenascin-C expression correlated with a history of miscarriage. Conclusions: There is a need for further exploration of the endometrial microbiota, and how the microbiota members or profile interplays with fertility or assisted reproductive technologies.
- Published
- 2018
8. Molecular analysis of the oral bacterial microbiota of breast-fed and formula-fed human infants_part 1
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Saad Al-shehri, Knox CL, Cowley DM, Charles BG, Shaw PN, Liley H, Ranasinghe PD, Duley JA, Sweeney EL, Henman M, Wright J, Saad Al-shehri, Knox CL, Cowley DM, Charles BG, Shaw PN, Liley H, Ranasinghe PD, Duley JA, Sweeney EL, Henman M, and Wright J
- Published
- 2014
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9. Molecular analysis of the oral bacterial microbiota of breast-fed and formula-fed human infants_part 2
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Saad Al-shehri, Knox CL, Cowley DM, Charles BG, Shaw PN, Liley H, Ranasinghe PD, Duley JA, Sweeney EL, Henman M, Wright J, Saad Al-shehri, Knox CL, Cowley DM, Charles BG, Shaw PN, Liley H, Ranasinghe PD, Duley JA, Sweeney EL, Henman M, and Wright J
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- 2014
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10. A novel murine model mimicking male genital Neisseria species infection using Neisseria musculi†.
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Bryan ER, McRae J, Kumar V, Trim LK, Maidment TI, Tickner JAD, Sweeney EL, Williams ED, Whiley DM, and Beagley KW
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- Male, Animals, Mice, Gonorrhea microbiology, Mice, Inbred C57BL, Genitalia, Male microbiology, Neisseriaceae Infections microbiology, Disease Models, Animal, Neisseria isolation & purification
- Abstract
With ~78 million cases yearly, the sexually transmitted bacterium Neisseria gonorrhoeae is an urgent threat to global public health due to continued emergence of antimicrobial resistance. In the male reproductive tract, untreated infections may cause permanent damage, poor sperm quality, and subsequently subfertility. Currently, few animal models exist for N. gonorrhoeae infection, which has strict human tropism, and available models have limited translatability to human disease. The absence of appropriate models inhibits the development of vital new diagnostics and treatments. However, the discovery of Neisseria musculi, a mouse oral cavity bacterium, offers much promise. This bacterium has already been used to develop an oral Neisseria infection model, but the feasibility of establishing urogenital gonococcal models is unexplored. We inoculated mice via the intrapenile route with N. musculi. We assessed bacterial burden throughout the male reproductive tract, the systemic and tissue-specific immune response 2-weeks postinfection, and the effect of infection on sperm health. Neisseria musculi was found in penis (2/5) and vas deferens (3/5) tissues. Infection altered immune cell counts: CD19+ (spleen, lymph node, penis), F4/80+ (spleen, lymph node, epididymus), and Gr1+ (penis) compared with noninfected mice. This culminated in sperm from infected mice having poor viability, motility, and morphology. We hypothesize that in the absence of testis infection, infection and inflammation in other reproductive is sufficient to damage sperm quality. Many results herein are consistent with outcomes of gonorrhoea infection, indicating the potential of this model as a tool for enhancing the understanding of Neisseria infections of the human male reproductive tract., (© The Author(s) 2024. Published by Oxford University Press on behalf of Society for the Study of Reproduction. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
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- 2024
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11. Response to the ASHM 2023 statement on the use of doxy-PEP in Australia: considerations and recommendations.
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Bell SFE, Sweeney EL, Kong FYS, Whiley DM, Bradshaw CS, and Tickner JA
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- Humans, Australia, Doxycycline, Anti-Bacterial Agents therapeutic use
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- 2024
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12. Concurrent parC and gyrA fluoroquinolone resistance mutations and associated strains in Mycoplasma genitalium in Queensland, Australia.
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Ertl NG, Anderson TK, Pardo CJ, Maidment TI, Murray GL, Bradshaw CS, Whiley DM, and Sweeney EL
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- Humans, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Australia epidemiology, Fluoroquinolones pharmacology, Macrolides, Mutation, Queensland, Drug Resistance, Bacterial, Mycoplasma genitalium genetics, Mycoplasma Infections drug therapy, Mycoplasma Infections epidemiology, Mycoplasma Infections microbiology, DNA Gyrase genetics, DNA Gyrase metabolism, Bacterial Proteins genetics, Bacterial Proteins metabolism
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- 2024
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13. Application of the ViroKey® SQ FLEX assay for detection of cytomegalovirus antiviral resistance.
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Hume J, Lowry K, Whiley DM, Irwin AD, Bletchly C, and Sweeney EL
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- Adult, Humans, Child, Antiviral Agents pharmacology, Antiviral Agents therapeutic use, Mutation, Drug Resistance, Viral genetics, Cytomegalovirus genetics, Cytomegalovirus Infections drug therapy
- Abstract
Background: Cytomegalovirus (CMV) is a viral infection which establishes lifelong latency, often reactivating and causing disease in immunosuppressed individuals, including haematopoietic stem cell transplant (HSCT) recipients. Treatment can be problematic due to antiviral resistance which substantially increases the risk of patient mortality. Diagnostic testing capabilities for CMV antiviral resistance in Australia and elsewhere have traditionally relied on gene-specific Sanger sequencing approaches, however, are now being superseded by next generation sequencing protocols., Objective: Provide a snapshot of local mutations and explore the feasibility of the ViroKey
ࣨ ® SQ FLEX Genotyping Assay (Vela Diagnostics Pty Ltd) by examining sequencing success., Method: Performed sequencing on adult (n = 38) and paediatric (n = 81) plasma samples, over a large range of viral loads (above and below the assay recommended threshold of ≥1,000 International Units (IU)/mL; noting most of our paediatric samples have loads <1,000 IU/mL)., Results: Eleven test runs (including three repeat runs; 14 to 15 samples per run) were conducted, and four runs were deemed valid. The overall individual sample success rate for the four evaluable test runs was 71.2% (42/59 samples); 80.4% (37/46) samples ≥1,000 IU/mL were valid. Ten clinically important antiviral resistance mutations were detected, the most common being A594V in the UL97 gene, found in 6 (5%) samples., Conclusions: A range of technical issues were experienced, however with improvement this platform could be a useful addition to routine pathology workflows, providing timely antiviral resistance results for patients undergoing HSCT., Competing Interests: Declaration of Competing Interest MD Solutions Australasia Pty Ltd provided loan instruments and technical support. Reagents and consumables were purchased by the Children's Hospital Foundation grant (project ID RPC00095). MD solutions Australasia Pty Ltd and Vela Diagnostics played no role in the design, analysis and reporting within this study. The authors declare no conflict of interest., (Copyright © 2023 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2023
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14. gyrA Mutations in Mycoplasma genitalium and Their Contribution to Moxifloxacin Failure: Time for the Next Generation of Resistance-Guided Therapy.
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Murray GL, Plummer EL, Bodiyabadu K, Vodstrcil LA, Huaman JL, Danielewski JA, Chua TP, Machalek DA, Garland S, Doyle M, Sweeney EL, Whiley DM, and Bradshaw CS
- Subjects
- Humans, Male, Female, Moxifloxacin therapeutic use, Moxifloxacin pharmacology, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Drug Resistance, Bacterial genetics, Fluoroquinolones pharmacology, Fluoroquinolones therapeutic use, Mutation, Macrolides pharmacology, Mycoplasma genitalium genetics, Mycoplasma Infections microbiology
- Abstract
Background: Although single nucleotide polymorphisms (SNPs) in Mycoplasma genitalium parC contribute to fluoroquinolone treatment failure, data are limited for the homologous gene, gyrA. This study investigated the prevalence of gyrA SNPs and their contribution to fluoroquinolone failure., Methods: Samples from 411 patients (male and female) undergoing treatment for M. genitalium infection (Melbourne Sexual Health Centre, March 2019-February 2020) were analyzed by Sanger sequencing (gyrA and parC). For patients treated with moxifloxacin (n = 194), the association between SNPs and microbiologic treatment outcome was analyzed., Results: The most common parC SNP was G248T/S83I (21.1% of samples), followed by D87N (2.3%). The most common gyrA SNP was G285A/M95I (7.1%). Dual parC/gyrA SNPs were found in 8.6% of cases. One third of infections harboring parC G248T/S83I SNP had a concurrent SNP in gyrA conferring M95I. SNPs in gyrA cooccurred with parC S83I variations. Treatment failure was higher in patients with parC S83I/gyrA dual SNPs when compared with infections with single S83I SNP alone from analysis of (1) 194 cases in this study (81.2% vs 45.8%, P = .047), and (2) pooled analysis of a larger population of 535 cases (80.6% vs 43.2%; P = .0027), indicating a strong additive effect., Conclusions: Compared with parC S83I SNP alone, M. genitalium infections with dual mutations affecting parC/gyrA had twice the likelihood of failing moxifloxacin. Although antimicrobial resistance varies by region globally, these data indicate that gyrA should be considered as a target for future resistance assays in Australasia. We propose a strategy for the next generation of resistance-guided therapy incorporating parC and gyrA testing., Competing Interests: Potential conflicts of interest . C. S. B., D. M. W., E. L. S. and G. L. M. report receiving funding support and diagnostic kits from Speedx Pty Ltd for research on Mycoplasma genitalium. G. L. M. also reports that his laboratory has received diagnostic kits from TibMolBiol unrelated to this study. C. S. B. has advised a number of industries over the years including Nabriva, GSK, and Roche Pty Ltd but has not received payment for this advisory role. S. M. G. reports grants or contracts as an human papillomavirus (HPV) Advisory Board member for Merck, as well as payment or honoraria received as an HPV consultant for Merck. C. S. B. reports a leadership or fiduciary role in the ISSTDR Board. All other authors report no potential conflicts. All authors have submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest. Conflicts that the editors consider relevant to the content of the manuscript have been disclosed., (© The Author(s) 2023. Published by Oxford University Press on behalf of Infectious Diseases Society of America.)
- Published
- 2023
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15. Mycoplasma hominis and Ureaplasma urealyticum infections in the immediate post-lung transplant period: A case series and literature review.
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Divithotewala C, Sweeney EL, Burke A, Graves B, Stewart A, Whiley D, Heney C, Hopkins PM, and Chambers DC
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- Male, Humans, Middle Aged, Young Adult, Adult, Ureaplasma urealyticum, Mycoplasma hominis, Ureaplasma, Anti-Bacterial Agents therapeutic use, Ureaplasma Infections diagnosis, Ureaplasma Infections drug therapy, Ureaplasma Infections epidemiology, Mediastinitis
- Abstract
Mycoplasma hominis and Ureaplasma species infections in the post-transplant setting are believed to be donor-derived and can be associated with poor outcomes. Difficulty in culturing and identifying these organisms is a significant barrier to diagnosis and early intervention. Tetracyclines, macrolides and fluoroquinolones are the mainstay treatments to cure these infections; however, there are increasing reports of antibiotic resistance. In this case series, we report our single-centre experience with M. hominis and U. urealyticum infection after lung transplantation (9 recipients, all men, mean age 56 years). Delayed diagnosis was common. Young donor age (mean age 23 yrs) and high-risk donor social history (67%) were repeatedly noted in these cases, and all infections were associated with significant morbidity (anastomosis and sternal wound infection, empyema, mediastinitis, pericarditis). Two patients died; with one directly related to Ureaplasma urealyticum infection. In conclusion post lung transplant M. hominis, and U. urealyticum infections are challenging and carry high morbidity. More prospective studies are required to assess the true prevalence, full spectrum of complications and utility of molecular diagnostics to aid early diagnosis and identify antibiotic susceptibility of Mycoplasma and Ureaplasma infections in the post-lung transplant setting., (© 2023 Wiley Periodicals LLC.)
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- 2023
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16. Cytomegalovirus in children undergoing haematopoietic stem cell transplantation: a diagnostic and therapeutic approach to antiviral resistance.
- Author
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Hume J, Sweeney EL, Lowry K, Fraser C, Clark JE, Whiley DM, and Irwin AD
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Cytomegalovirus (CMV) is a ubiquitous virus which causes a mild illness in healthy individuals. In immunocompromised individuals, such as children receiving haematopoietic stem cell transplantation, CMV can reactivate, causing serious disease and increasing the risk of death. CMV can be effectively treated with antiviral drugs, but antiviral resistance is an increasingly common complication. Available therapies are associated with adverse effects such as bone marrow suppression and renal impairment, making the choice of appropriate treatment challenging. New agents are emerging and require evaluation in children to establish their role. This review will discuss established and emerging diagnostic tools and treatment options for CMV, including antiviral resistant CMV, in children undergoing haematopoietic stem cell transplant., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (© 2023 Hume, Sweeney, Lowry, Fraser, Clark, Whiley and Irwin.)
- Published
- 2023
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17. Primary oral vaccination followed by a vaginal pull protects mice against genital HSV-2 infection.
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Mulvey PBM, Trim LK, Aaskov JG, Bryan ER, Sweeney EL, Kollipara A, Plenderleith MB, Aldwell FE, and Beagley KW
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- Female, Humans, Herpesvirus 2, Human, CD8-Positive T-Lymphocytes, Vagina, Vaccination, HIV Infections, Herpes Genitalis prevention & control
- Abstract
Problem: HSV-2 infected more than 491 million people aged 15-49 world-wide in 2016. The morbidity associated with recurrent infections and the increased risk of HIV infection make this a major health problem. To date there is no effective vaccine. Because HSV-2 ascends to the dorsal route ganglion within 12-18 h of infection, an effective vaccine will need to elicit a strong local resident CD8+ T cell response to prevent the infection from becoming life-long., Method of Study: Using a mouse model we investigated the potential of oral immunization with a novel lipid adjuvant (Liporale
TM ) followed by local vaginal application of an inflammatory agents to protect against primary HSV-2 infections., Results: Oral vaccination of mice with live-attenuated HSV-2 in Liporale followed by vaginal application of DNFB or CXCL9/10 led to recruitment of tissue-resident CD8+ memory cells into the genital epithelia. This prime and pull vaccination strategy provided complete protection against wild-type HSV-2 challenge and prevented viral dissemination to the spinal cords., Conclusions: Activation of mucosal immunity by oral immunization, combined with induction of transient local genital inflammation can recruit long-lived tissue resident CD8+ T cells into the genital epithelium, providing significant protection against primary HSV-2 infection., (© 2022 The Authors. American Journal of Reproductive Immunology published by John Wiley & Sons Ltd.)- Published
- 2023
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18. Mycoplasma genitalium macrolide and fluoroquinolone resistance in pregnant women in Papua New Guinea.
- Author
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Jonduo ME, Vallely AJ, Whiley DM, Riddell MA, Pomat W, Low N, and Sweeney EL
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- Pregnancy, Humans, Female, Fluoroquinolones pharmacology, Fluoroquinolones therapeutic use, Macrolides pharmacology, Macrolides therapeutic use, Pregnant People, Papua New Guinea epidemiology, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Drug Resistance, Bacterial, Prevalence, Mycoplasma genitalium genetics, Mycoplasma Infections drug therapy, Mycoplasma Infections epidemiology
- Abstract
Competing Interests: Competing interests: DMW and ES report research funding from SpeeDx. SpeeDx kindly provided the ResistancePlus MG kit for use in this study.
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- 2023
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19. Mast cell-derived factor XIIIA contributes to sexual dimorphic defense against group B streptococcal infections.
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Piliponsky AM, Sharma K, Quach P, Brokaw A, Nguyen S, Orvis A, Saha SS, Samanas NB, Seepersaud R, Tang YP, Mackey E, Bhise G, Gendrin C, Furuta A, Seo AJ, Guga E, Miralda I, Coleman M, Sweeney EL, Bäuml CA, Imhof D, Snyder JM, Moeser AJ, and Rajagopal L
- Subjects
- Androgens metabolism, Animals, Female, Fibrin metabolism, Fibronectins genetics, Fibronectins metabolism, Humans, Male, Mast Cells metabolism, Mice, Streptococcus agalactiae metabolism, Transglutaminases metabolism, Factor XIIIa metabolism, Streptococcal Infections genetics
- Abstract
Invasive bacterial infections remain a major cause of human morbidity. Group B streptococcus (GBS) are Gram-positive bacteria that cause invasive infections in humans. Here, we show that factor XIIIA-deficient (FXIIIA-deficient) female mice exhibited significantly increased susceptibility to GBS infections. Additionally, female WT mice had increased levels of FXIIIA and were more resistant to GBS infection compared with isogenic male mice. We observed that administration of exogenous FXIIIA to male mice increased host resistance to GBS infection. Conversely, administration of a FXIIIA transglutaminase inhibitor to female mice decreased host resistance to GBS infection. Interestingly, male gonadectomized mice exhibited decreased sensitivity to GBS infection, suggesting a role for gonadal androgens in host susceptibility. FXIIIA promoted GBS entrapment within fibrin clots by crosslinking fibronectin with ScpB, a fibronectin-binding GBS surface protein. Thus, ScpB-deficient GBS exhibited decreased entrapment within fibrin clots in vitro and increased dissemination during systemic infections. Finally, using mice in which FXIIIA expression was depleted in mast cells, we observed that mast cell-derived FXIIIA contributes to host defense against GBS infection. Our studies provide insights into the effects of sexual dimorphism and mast cells on FXIIIA expression and its interactions with GBS adhesins that mediate bacterial dissemination and pathogenesis.
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- 2022
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20. Individualised treatment of Mycoplasma genitalium infection-incorporation of fluoroquinolone resistance testing into clinical care.
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Sweeney EL, Bradshaw CS, Murray GL, and Whiley DM
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- Anti-Bacterial Agents, Australia, Drug Resistance, Bacterial, Fluoroquinolones, Humans, Macrolides, Mutation, Prevalence, RNA, Ribosomal, 23S, Mycoplasma Infections, Mycoplasma genitalium
- Abstract
Mycoplasma genitalium is an emerging global health threat, due to an alarming rise in antimicrobial resistance. Although individualised treatment approaches have been successfully adopted for macrolides, treatment is complicated by rising rates of fluoroquinolone resistance and by the scarcity of alternative treatment options. In this Personal View, we discuss the available data within the literature and highlight issues surrounding individualised treatment using fluoroquinolones, including the hesitation to focus on inclusion of ParC fluoroquinolone resistance mutations for guiding antimicrobial treatments. We propose that there is a clear role for diagnostics that focus on the absence of resistance mutations (ie, wild-type sequences and antimicrobial susceptibility) to inform microbial cure following fluoroquinolone antimicrobials, with Australian data strongly supporting this approach. The development of molecular tests that incorporate markers to detect both wild-type and only the most common ParC mutation, Ser83Ile, could greatly improve first-line antimicrobial selection and stewardship, individualise tests of cure, and be extremely useful in the care of patients with M genitalium infection., Competing Interests: Declaration of interests All authors receive research funding from SpeeDx, and note that SpeeDx has specific interest related to resistance-guided therapy. SpeeDx did not have any role in the conception or drafting of this mauscript., (Copyright © 2022 Elsevier Ltd. All rights reserved.)
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- 2022
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21. Can ParC Ser83Ile status predict fluoroquinolone efficacy in Mycoplasma genitalium infection? - Authors' reply.
- Author
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Sweeney EL, Bradshaw CS, Murray GL, and Whiley DM
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- Anti-Bacterial Agents, DNA Gyrase, Drug Resistance, Bacterial, Fluoroquinolones, Humans, Macrolides, Mutation, Mycoplasma Infections, Mycoplasma genitalium
- Abstract
Competing Interests: All authors receive research funding from SpeeDx, and note that SpeeDx has specific interests related to resistance-guided therapy. SpeeDx had no role in the conception or drafting of this letter.
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- 2022
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22. Adverse pregnancy and birth outcomes associated with Mycoplasma hominis, Ureaplasma urealyticum and Ureaplasma parvum : a systematic review and meta-analysis.
- Author
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Jonduo ME, Vallely LM, Wand H, Sweeney EL, Egli-Gany D, Kaldor J, Vallely AJ, and Low N
- Subjects
- Female, Humans, Infant, Newborn, Mycoplasma hominis, Pregnancy, Ureaplasma, Ureaplasma urealyticum, Mycoplasma Infections, Pregnancy Complications, Infectious, Premature Birth, Vaginosis, Bacterial
- Abstract
Objectives: Mycoplasma hominis, Ureaplasma urealyticum and Ureaplasma parvum (genital mycoplasmas) commonly colonise the urogenital tract in pregnant women. This systematic review aims to investigate their role in adverse pregnancy and birth outcomes, alone or in combination with bacterial vaginosis (BV)., Methods: We searched Embase, Medline and CINAHL databases from January 1971 to February 2021. Eligible studies tested for any of the three genital mycoplasmas during pregnancy and reported on the primary outcome, preterm birth (PTB) and/or secondary outcomes low birth weight (LBW), premature rupture of membranes (PROM), spontaneous abortion (SA) and/or perinatal or neonatal death (PND).Two reviewers independently screened titles and abstracts, read potentially eligible full texts and extracted data. Two reviewers independently assessed risks of bias using published checklists. Random effects meta-analysis was used to estimate summary ORs (with 95% CIs and prediction intervals). Multivariable and stratified analyses were synthesised descriptively., Results: Of 57/1194 included studies, 39 were from high-income countries. In meta-analysis of unadjusted ORs, M. hominis was associated with PTB (OR 1.87, 95% CI 1.49 to 2.34), PROM, LBW and PND but not SA. U. urealyticum was associated with PTB (OR 1.84, 95% CI 1.34 to 2.55), PROM, LBW, SA and PND. U. parvum was associated with PTB (1.60, 95% CI 1.12 to 2.30), PROM and SA. Nine of 57 studies reported any multivariable analysis. In two studies, analyses stratified by BV status showed that M. hominis and U. parvum were more strongly associated with PTB in the presence than in the absence of BV. The most frequent source of bias was a failure to control for confounding., Conclusions: The currently available literature does not allow conclusions about the role of mycoplasmas in adverse pregnancy and birth outcomes, alone or with coexisting BV. Future studies that consider genital mycoplasmas in the context of the vaginal microbiome are needed., Prospero Registration Number: CRD42016050962., Competing Interests: Competing interests: NL is on the advisory board of Sefunda AG, a start-up company that develops point-of-care tests for sexually transmitted infections., (© Author(s) (or their employer(s)) 2022. Re-use permitted under CC BY. Published by BMJ.)
- Published
- 2022
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23. Mycoplasma genitalium : enhanced management using expanded resistance-guided treatment strategies.
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Sweeney EL, Whiley DM, Murray GL, and Bradshaw CS
- Subjects
- Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Asymptomatic Infections, Drug Resistance, Bacterial, Humans, Prevalence, Anti-Infective Agents therapeutic use, Mycoplasma Infections epidemiology, Mycoplasma genitalium
- Abstract
Mycoplasma genitalium is an emerging sexually transmitted bacterium that is gaining attention because of the impact escalating antimicrobial resistance (AMR) is having on patient management. Of additional concern is that increased availability of testing appears to be resulting in screening practices that are not supported by clinical guidelines. This results in increasing numbers of asymptomatic M. genitalium infections being identified, which when combined with AMR issues, creates significant challenges for patients and clinicians. Rapidly rising levels of AMR, coupled with limited alternative treatment options, means patients can enter cycles of complex antimicrobial regimens that may cause more harm than the infection itself. In this review, we discuss the emergence of AMR and the implication for treatment practices, highlight the recommendations for testing but not screening for M. genitalium , and discuss expansion of individualised treatment strategies, to curb the emergence of resistance and improve outcomes for patients. We also provide suggestions for future research on the transmission and spread of resistance, to enhance global surveillance of this antimicrobial resistant pathogen and inform the revision of local and international treatment strategies.
- Published
- 2022
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24. Novel probe-based melting curve assays for the characterization of fluoroquinolone resistance in Mycoplasma genitalium.
- Author
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Tickner JA, Bradshaw CS, Murray GL, Whiley DM, and Sweeney EL
- Subjects
- Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Drug Resistance, Bacterial genetics, Fluoroquinolones pharmacology, Fluoroquinolones therapeutic use, Humans, Macrolides therapeutic use, Mutation, Prevalence, RNA, Ribosomal, 23S genetics, Mycoplasma Infections drug therapy, Mycoplasma genitalium genetics
- Abstract
Background: Mycoplasma genitalium infection is a sexually transmitted infection that has rapidly become resistant to mainstay treatments. While individualized treatment approaches have been recommended and adopted for macrolides, individualized therapy for fluoroquinolones has not yet been explored, due to a lack of commercial molecular assays and a lack of confidence in specific mutations associated with resistance. In another recent study, we defined a clear role and diagnostic utility in focusing on the absence of resistance mutations to inform microbial cure with fluoroquinolone antimicrobials., Methods: We developed two proof-of-concept molecular tests that focus on detection of M. genitalium and characterization of WT parC sequences that are strongly linked to fluoroquinolone susceptibility., Results: We screened a total of 227 M. genitalium-positive samples using novel molecular beacon and dual hybridization probe assays. These assays were able to detect M. genitalium and characterize fluoroquinolone susceptibility in 143/227 (63%) samples, based on clear differences in melting peak temperatures. The results of these molecular assays were in 100% agreement with 'gold standard' Sanger sequencing. Additionally, WT parC sequences were readily distinguished from M. genitalium samples harbouring parC mutations of known or suspected clinical significance. The ability of the assays to successfully characterize fluoroquinolone susceptibility and resistance was reduced in low M. genitalium load samples., Conclusions: These proof-of-concept assays have considerable potential to improve individualized treatment approaches and rationalize tests of cure for M. genitalium infection. The ability to initiate individualized treatment in up to two-thirds of cases will enhance antimicrobial stewardship for this challenging pathogen., (© The Author(s) 2022. Published by Oxford University Press on behalf of the British Society for Antimicrobial Chemotherapy.)
- Published
- 2022
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25. Two Treponema pallidum strains account for the majority of syphilis infections, including among females, in Queensland, Australia.
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Sweeney EL, Lowry K, Seel M, Rahimi F, Langton-Lockton J, Bletchly C, Nimmo GR, and Whiley DM
- Subjects
- Australia epidemiology, Female, Homosexuality, Male, Humans, Male, Multilocus Sequence Typing, Pandemics, Queensland epidemiology, Treponema pallidum genetics, COVID-19, Sexual and Gender Minorities, Syphilis epidemiology
- Abstract
Abstract: An ongoing outbreak of syphilis in Australia, first reported in the state of Queensland in 2011, has led to increasing cases of congenital syphilis, including several deaths. Here, we applied multi-locus sequence typing (MLST) on available Treponema pallidum PCR-positive samples from the state of Queensland from the beginning of the outbreak to July 2020. In total, 393 samples from 337 males and 56 females were genotyped. Of 36 different Treponema pallidum sequence types (ST) observed, the two most common STs, ST 1 (also reported to be a dominant strain in various other countries) and ST 100 (the latter differing from ST 1 by only one single nucleotide polymorphism (SNP) based on the MLST scheme), together comprised 69% (271/393) of all samples, including the majority of samples in females (79%; 44/56). ST 1 was prevalent throughout the entire study period. Both strains remained the most common STs during the year 2020 where social distancing and other measures were implemented due to the COVID-19 pandemic. Both STs had high male-to-female ratios and included male rectal infections, therefore suggestive of occurrence primarily among men-who-have-sex-with-men (MSM). Hence, bridging from MSM to heterosexual networks may potentially contribute to infections among females, but further studies are needed to confirm this. Overall, there was considerable diversity of Treponema pallidum genotypes observed throughout the study period, but the fact that two key strains accounted for the majority of infections, including among females, stresses the need for further investigations into the transmission of these strains, and potentially a need for targeted public health interventions to better control the spread of syphilis in Queensland., (© Commonwealth of Australia CC BY-NC-ND.)
- Published
- 2022
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26. parC Variants in Mycoplasma genitalium: Trends over Time and Association with Moxifloxacin Failure.
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Murray GL, Bodiyabadu K, Vodstrcil LA, Machalek DA, Danielewski J, Plummer EL, Garland SM, Whiley DM, Sweeney EL, and Bradshaw CS
- Subjects
- Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Drug Resistance, Bacterial genetics, Fluoroquinolones therapeutic use, Humans, Macrolides, Moxifloxacin therapeutic use, Mycoplasma Infections drug therapy, Mycoplasma Infections epidemiology, Mycoplasma genitalium genetics
- Abstract
Prevalence, trends, and treatment outcome estimates were generated for parC variants in macrolide-resistant Mycoplasma genitalium. Among 539 cases, the most common amino acid change was S83I, which increased from 13% in 2012 to 2013, to 23% in 2019 to 2020 ( P
trend = 0.046). From 381 moxifloxacin treatments, failure occurred in 58.7% (95% confidence interval [CI], 46.7 to 69.9) of cases with S83I. Other changes affecting S83 or D87 were uncommon and minor contributors to failure. The absence of S83I was highly predictive of moxifloxacin cure (96.4%; 95% CI, 93.7 to 98.2), highlighting diagnostic potential.- Published
- 2022
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27. The Prevalence of Antimicrobial Resistant Neisseria gonorrhoeae in Papua New Guinea: A Systematic Review and Meta-Analysis.
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Willie B, Sweeney EL, Badman SG, Chatfield M, Vallely AJ, Kelly-Hanku A, and Whiley DM
- Subjects
- Anti-Bacterial Agents pharmacology, Drug Resistance, Bacterial, Humans, Microbial Sensitivity Tests, Papua New Guinea epidemiology, Prevalence, Gonorrhea drug therapy, Gonorrhea epidemiology, Neisseria gonorrhoeae
- Abstract
Neisseria gonorrhoeae antimicrobial resistance (NG AMR) has become an urgent concern globally. The World Health Organization, the United States of America Centers for Disease Control, and other regulators have called to improve resistance-testing methods to enhance NG AMR surveillance. NG AMR surveillance remains critical in informing treatment; unfortunately, this is often lacking in settings with limited resources, such as Papua New Guinea (PNG). We conducted a systematic review and a prevalence meta-analysis, and provided an overview of NG AMR in PNG. We showed the lack of NG AMR data in the last decade, and emphasized the need for NG AMR surveillance in PNG. Since NG AMR testing by the NG culture method is unreliable in PNG, we suggested using molecular tests to complement and enhance NG AMR surveillance.
- Published
- 2022
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28. Global phylogeny of Treponema pallidum lineages reveals recent expansion and spread of contemporary syphilis.
- Author
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Beale MA, Marks M, Cole MJ, Lee MK, Pitt R, Ruis C, Balla E, Crucitti T, Ewens M, Fernández-Naval C, Grankvist A, Guiver M, Kenyon CR, Khairullin R, Kularatne R, Arando M, Molini BJ, Obukhov A, Page EE, Petrovay F, Rietmeijer C, Rowley D, Shokoples S, Smit E, Sweeney EL, Taiaroa G, Vera JH, Wennerås C, Whiley DM, Williamson DA, Hughes G, Naidu P, Unemo M, Krajden M, Lukehart SA, Morshed MG, Fifer H, and Thomson NR
- Subjects
- Anti-Bacterial Agents pharmacology, Drug Resistance, Bacterial, Genome, Bacterial, Humans, Macrolides pharmacology, Treponema pallidum classification, Treponema pallidum genetics, Treponema pallidum physiology, Phylogeny, Syphilis microbiology, Treponema pallidum isolation & purification
- Abstract
Syphilis, which is caused by the sexually transmitted bacterium Treponema pallidum subsp. pallidum, has an estimated 6.3 million cases worldwide per annum. In the past ten years, the incidence of syphilis has increased by more than 150% in some high-income countries, but the evolution and epidemiology of the epidemic are poorly understood. To characterize the global population structure of T. pallidum, we assembled a geographically and temporally diverse collection of 726 genomes from 626 clinical and 100 laboratory samples collected in 23 countries. We applied phylogenetic analyses and clustering, and found that the global syphilis population comprises just two deeply branching lineages, Nichols and SS14. Both lineages are currently circulating in 12 of the 23 countries sampled. We subdivided T. p. pallidum into 17 distinct sublineages to provide further phylodynamic resolution. Importantly, two Nichols sublineages have expanded clonally across 9 countries contemporaneously with SS14. Moreover, pairwise genome analyses revealed examples of isolates collected within the last 20 years from 14 different countries that had genetically identical core genomes, which might indicate frequent exchange through international transmission. It is striking that most samples collected before 1983 are phylogenetically distinct from more recently isolated sublineages. Using Bayesian temporal analysis, we detected a population bottleneck occurring during the late 1990s, followed by rapid population expansion in the 2000s that was driven by the dominant T. pallidum sublineages circulating today. This expansion may be linked to changing epidemiology, immune evasion or fitness under antimicrobial selection pressure, since many of the contemporary syphilis lineages we have characterized are resistant to macrolides., (© 2021. The Author(s).)
- Published
- 2021
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29. Impairments in glycaemic control do not increase linearly with repeated nights of sleep restriction in healthy adults: a randomised controlled trial.
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Sweeney EL, Peart DJ, Ellis JG, and Walshe IH
- Subjects
- Adult, Area Under Curve, Cross-Over Studies, Energy Intake, Exercise physiology, Female, Glucose Tolerance Test, Glycemic Control, Humans, Insulin blood, Male, Young Adult, Blood Glucose metabolism, Sleep Deprivation blood
- Abstract
Evidence suggests reduced glycaemic control following sleep restriction in healthy individuals. However, it remains unknown if impairments in glycaemic control increase with each additional night of sleep restriction in a linear manner. This randomised crossover study aimed to determine if the impairment in glycaemic control increases with each additional night of sleep restriction. Ten healthy individuals underwent 4 nights of control sleep (8 hours in bed) and 4 nights of sleep restriction (4 hours in bed) in a sleep laboratory. An oral glucose tolerance test was conducted each morning. Serum glucose and insulin were measured. Glucose and insulin area under the curve were higher overall in the sleep restriction trial compared with control ( p < 0.001 and p = 0.033); however, no effect of day ( p = 0.620 and p = 0.863) or interaction effect ( p = 0.152 and p = 0.285) were observed. This supports previous literature showing a detrimental impact of sleep restriction on glucose regulation. The present findings, however, suggest the impairment in glycaemic control does not increase in a linear manner with an increasing number of nights of sleep restriction. This may have implications for the design of future studies examining sleep restriction and glycaemic control. Novelty: Four nights of sleep restriction impaired glycaemic control in healthy individuals, but did not do so in a linear manner. No effect of number of nights of restriction was found for glucose or insulin, which may have implications for future studies.
- Published
- 2021
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30. Management of the axilla post-neoadjuvant chemotherapy in node positive breast cancer: Can the combination of axillary ultrasound and tumor biomarkers improve patient selection for sentinel node biopsy?
- Author
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Dinneen K, O'Brien C, Quinn CM, Sweeney EL, Byrnes KG, McNally SM, Prichard RS, and Gibbons D
- Subjects
- Axilla, Biomarkers, Tumor, Female, Humans, Lymph Node Excision, Lymph Nodes diagnostic imaging, Patient Selection, Sentinel Lymph Node Biopsy, Breast Neoplasms diagnostic imaging, Breast Neoplasms drug therapy, Breast Neoplasms surgery, Neoadjuvant Therapy
- Published
- 2021
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31. Exploring the implications for coincidental treatment of Mycoplasma genitalium infection in Neisseria gonorrhoeae -positive patients.
- Author
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Mhango LP, Trembizki E, Thng C, Whiley DM, and Sweeney EL
- Published
- 2021
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32. Mycoplasma genitalium infections can comprise a mixture of both fluoroquinolone-susceptible and fluoroquinolone-resistant strains.
- Author
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Sweeney EL, Lowry K, Bletchly C, Nimmo GR, and Whiley DM
- Subjects
- Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Australia, Drug Resistance, Bacterial, Fluoroquinolones pharmacology, Humans, Macrolides, Mutation, RNA, Ribosomal, 23S, Mycoplasma Infections drug therapy, Mycoplasma genitalium genetics
- Abstract
Background: Mycoplasma genitalium was recently added to the CDC's antimicrobial resistance threats 'watch list', as it has rapidly become resistant to mainstay treatments. In Australia, treatment failure with fluoroquinolones remain commonplace, even when Sanger sequencing fails to identify evidence of resistance mutations., Methods: Suspecting that Sanger sequencing may miss low-load mixed infections, we applied three additional PCR-based approaches (allele-specific primer-based PCR, probe-based PCR and amplicon deep sequencing) to detect mutations associated with fluoroquinolone susceptibility/resistance. We focused on resistance mutations at amino acid positions 83 and 87 of parC, as these were previously shown to be common in Australia., Results: Our results showed evidence of mixtures of fluoroquinolone-susceptible and -resistant strains in up to 27/423 samples (6.4%). These included 1 sample that was indicated to be mixed by Sanger sequencing and all three additional PCR methods, 6 samples detected by two or more of the additional PCRs but not by Sanger sequencing and finally 20 samples that were detected by only one of the additional PCR methods. A key question was whether Sanger sequencing failed to detect fluoroquinolone resistance in any samples; overall, we observed that Sanger sequencing failed to detect fluoroquinolone resistance in up to 3.8% (16/423) of samples., Conclusions: The presence of mixed susceptibility infections may have important implications for clinical patient management and stresses the need for appropriate detection of resistance and selection of antimicrobials to ensure appropriate treatment of M. genitalium infections., (© The Author(s) 2021. Published by Oxford University Press on behalf of the British Society for Antimicrobial Chemotherapy. All rights reserved. For permissions, please email: journals.permissions@oup.com.)
- Published
- 2021
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33. Involvement of a multifunctional rhamnosyltransferase in the synthesis of three related Acinetobacter baumannii capsular polysaccharides, K55, K74 and K85.
- Author
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Kenyon JJ, Arbatsky NP, Sweeney EL, Zhang Y, Senchenkova SN, Popova AV, Shneider MM, Shashkov AS, Liu B, Hall RM, and Knirel YA
- Subjects
- Biosynthetic Pathways genetics, Carbon-13 Magnetic Resonance Spectroscopy, Multigene Family, Proton Magnetic Resonance Spectroscopy, Sugars chemistry, Acinetobacter baumannii enzymology, Bacterial Capsules metabolism, Bacterial Proteins metabolism, Hexosyltransferases metabolism, Polysaccharides, Bacterial metabolism
- Abstract
KL55, KL74, and KL85 capsular polysaccharide (CPS) biosynthesis loci in Acinetobacter baumannii BAL_204, BAL_309, and LUH5543 genomes, respectively, are related and each contains genes for l-Rhap and d-GlcpA synthesis. The CPSs were isolated and studied by sugar analysis, Smith degradation, and
1 H and13 C NMR spectroscopy. The K55 and K74 CPSs are built up of branched octasaccharide repeats (K units) containing one residue each of d-GlcpA and d-GlcpNAc and six residues of l-Rhap. The K55 unit differs from the K74 unit in the linkage between D-GlcpA and an l-Rhap residue in the K unit (1 → 3 versus 1 → 2) and linkage between K units. However, most K units in the isolated K74 CPS were modified by β-elimination of a side-chain α-l-Rhap-(1 → 3)-α-l-Rhap disaccharide from position 4 of GlcA to give 4-deoxy-l-threo-hex-4-enuronic acid (1:~3 ratio of intact and modified units). The K85 CPS has a branched heptasaccharide K unit similar to the K74 unit but with one fewer α-l-Rhap residue in the side chain. In contrast to previous findings on A. baumannii CPSs, each K locus includes fewer glycosyltransferase (Gtr) genes than the number required to form all linkages in the K units. Hence, one Gtr appears to be multifunctional catalysing formation of two 1 → 2 and one 1 → 3 linkages between the l-Rha residues., (Copyright © 2020 Elsevier B.V. All rights reserved.)- Published
- 2021
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34. Evaluation of the SpeeDx MG parC (Beta) PCR Assay for Rapid Detection of Mycoplasma genitalium Quinolone Resistance-Associated Mutations.
- Author
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Sweeney EL, Lowry K, Ebeyan S, Lundgren M, and Whiley DM
- Subjects
- Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Drug Resistance, Bacterial genetics, Fluoroquinolones, Humans, Macrolides, Mutation, Polymerase Chain Reaction, Mycoplasma Infections diagnosis, Mycoplasma genitalium genetics, Quinolones pharmacology
- Published
- 2020
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35. Genotyping of Mycoplasma genitalium Suggests De Novo Acquisition of Antimicrobial Resistance in Queensland, Australia.
- Author
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Sweeney EL, Tickner J, Bletchly C, Nimmo GR, and Whiley DM
- Subjects
- Anti-Bacterial Agents pharmacology, Australia epidemiology, Drug Resistance, Bacterial, Genotype, Humans, Macrolides, Queensland, Mycoplasma Infections epidemiology, Mycoplasma genitalium genetics
- Published
- 2020
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36. Impaired Insulin Profiles Following a Single Night of Sleep Restriction: The Impact of Acute Sprint Interval Exercise.
- Author
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Sweeney EL, Peart DJ, Kyza I, Harkes T, Ellis JG, and Walshe IH
- Abstract
Experimental sleep restriction (SR) has demonstrated reduced insulin sensitivity in healthy individuals. Exercise is well-known to be beneficial for metabolic health. A single bout of exercise has the capacity to increase insulin sensitivity for up to 2 days. Therefore, the current study aimed to determine if sprint interval exercise could attenuate the impairment in insulin sensitivity after one night of SR in healthy males. Nineteen males were recruited for this randomized crossover study which consisted of four conditions-control, SR, control plus exercise, and sleep restriction plus exercise. Time in bed was 8 hr (2300-0700) in the control conditions and 4 hr (0300-0700) in the SR conditions. Conditions were separated by a 1-week entraining period. Participants slept at home, and compliance was assessed using wrist actigraphy. Following the night of experimental sleep, participants either conducted sprint interval exercise or rested for the equivalent duration. An oral glucose tolerance test was then conducted. Blood samples were obtained at regular intervals for measurement of glucose and insulin. Insulin concentrations were higher in SR than control (p = .022). Late-phase insulin area under the curve was significantly lower in sleep restriction plus exercise than SR (862 ± 589 and 1,267 ± 558; p = .004). Glucose area under the curve was not different between conditions (p = .207). These findings suggest that exercise improves the late postprandial response following a single night of SR.
- Published
- 2020
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37. Evaluation of the ResistancePlus MG FleXible Cartridge for Near-Point-of-Care Testing of Mycoplasma genitalium and Associated Macrolide Resistance Mutations.
- Author
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Sweeney EL, Mhango LP, Ebeyan S, Tan LY, Bletchly C, Nimmo GR, and Whiley DM
- Subjects
- Anti-Bacterial Agents pharmacology, Australia, Female, Genes, Bacterial, Humans, Macrolides pharmacology, Male, Mutation, Mycoplasma genitalium genetics, Polymerase Chain Reaction methods, Sensitivity and Specificity, Molecular Diagnostic Techniques methods, Mycoplasma genitalium isolation & purification, Point-of-Care Testing, RNA, Ribosomal, 23S genetics
- Published
- 2020
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38. The effect of acute exercise on environmentally induced symptoms of dry eye.
- Author
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Peart DJ, Walshe IH, Sweeney EL, James E, Henderson T, O'Doherty AF, and McDermott AM
- Subjects
- Adult, Body Temperature, Female, Humans, Humidity, Male, Matrix Metalloproteinase 9 metabolism, Random Allocation, Tears metabolism, Dry Eye Syndromes therapy, Exercise Therapy methods
- Abstract
The purpose of this study was to investigate the effects of acute exercise on environmentally induced symptoms of dry eye. Twelve participants without dry eye disease volunteered to complete three experimental visits in a randomized order; (1) control condition seated for 1 h at a relative humidity (RH) of 40% (CONT), (2) dry condition seated for 1 h at a RH of 20% (DRY), and (3) exercise condition seated for 40 min followed by 20 min of cycling exercise at a RH of 20% (EXER). Tear volume, tear matrix metalloproteinase 9 (MMP-9), perception of dry eye symptoms (frequency and severity), core temperature, and ocular surface temperature (OST) were measured at the end of each exposure. The perception of dry eye frequency and MMP-9 concentration were significantly higher in DRY compared to CONT (P < 0.012), with no differences in EXER compared to CONT. The results suggest that an acute bout of exercise may attenuate symptoms of environmentally induced dry eye, and warrant further research., (© 2020 The Authors. Physiological Reports published by Wiley Periodicals, Inc. on behalf of The Physiological Society and the American Physiological Society.)
- Published
- 2020
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39. Group B Streptococcus serotypes Ia and V induce differential vaginal immune responses that may contribute to long term colonization of the female reproductive tract.
- Author
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Sweeney EL, Gardiner S, Tickner J, Trim L, Beagley KW, and Carey AJ
- Subjects
- Animals, Cell Line, Cytokines immunology, Epithelial Cells drug effects, Epithelial Cells immunology, Estrogens pharmacology, Female, Humans, Mice, Inbred C57BL, Progesterone pharmacology, Serogroup, Streptococcal Infections microbiology, Vagina microbiology, Streptococcal Infections immunology, Streptococcus agalactiae, Vagina immunology
- Abstract
Problem: Group B Streptococcus (GBS) is a common colonizer of the female genital tract at the time of pregnancy and has been associated with severe neonatal infections. Despite trials for GBS vaccines already being underway, the factors influencing vaginal GBS colonization and clearance are currently poorly understood., Method of Study: Within this study, we investigated the host immune responses to GBS infections in mice that affect GBS vaginal colonization and clearance. Cervicovaginal swabs were used to measure vaginal GBS persistence, and vaginal cytokine responses were measured using the BioPlex
® system. Lymphocytes isolated from spleens were stimulated with UV-killed GBS to examine systemic cellular responses. Additional in vitro cellular experiments using human vaginal epithelial cells were also performed, examining the effect pregnancy level hormones had on GBS adhesion, invasion, and cytokine responses., Results: We observed significant differences in the ability of GBS serotype V infections to persist, compared with GBS serotype Ia vaginal infections. Vaginal cytokine response examination identified temporal changes in cytokine production (IL10, IFNγ, IL6, IL1β, and TNFα) in relation to GBS serotype and clearance or colonization. Lymphocyte proliferation assays also revealed robust cellular immune responses to GBS vaginal infections irrespective of clearance or colonization. In vitro human cellular analyses also identified that vaginal epithelial cell line cytokine production was suppressed in the presence of hormones despite no alteration in adhesion/invasion., Conclusion: Here, we establish previously unknown, serotype specific, temporal immune responses which may be associated with vaginal GBS colonization or clearance in the female genital tract., (© 2019 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.)- Published
- 2020
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40. False-negative Chlamydia polymerase chain reaction result caused by a cryptic plasmid-deficient Chlamydia trachomatis strain in Australia.
- Author
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Sweeney EL, Bletchly C, Gupta R, and Whiley DM
- Subjects
- Australia, Chlamydia Infections microbiology, False Negative Reactions, Humans, Male, Middle Aged, Polymerase Chain Reaction, Queensland, Rectal Diseases microbiology, Chlamydia Infections diagnosis, Chlamydia trachomatis genetics, DNA, Bacterial genetics, Plasmids genetics, Rectal Diseases diagnosis, Sequence Deletion genetics
- Abstract
Background The 7.5-kb chlamydial cryptic plasmid remains a widely used sequence target for Chlamydia trachomatis nucleic acid amplification tests, but sequence variation in this plasmid, particularly a previously reported 377-bp deletion, can cause false-negative results. Here we report the presence in Australia of a C. trachomatis strain lacking the cryptic plasmid., Methods: A rectal swab from a male in his 50s provided a positive result for C. trachomatis using the Roche Cobas 4800 test, but a negative result in our confirmatory in-house polymerase chain reaction (PCR) method targeting the chlamydial cryptic plasmid. This result was unexpected given our in-house PCR assay targeted a region of sequence outside the recognised 377-bp deletion. To further investigate this discrepancy, the sample was retested using a second in-house PCR targeting a chromosomal (ompA) gene as well as six primer sets flanking various regions of the cryptic plasmid., Results: The sample provided positive results in the second in-house method, confirming the presence of C. trachomatis DNA. All other primer sets targeting the cryptic plasmid failed to amplify, indicating a lack of the chlamydial cryptic plasmid in this sample., Conclusions: The recognition of a plasmid-deficient strain of C. trachomatis within Australia highlights further limitations of using the chlamydial cryptic plasmid for C. trachomatis diagnostics and re-emphasises the benefits of using multitarget assays to avoid false-negative results.
- Published
- 2019
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41. Response to Daly-Smith et al.'s commentary on 'The Daily Mile makes primary school children more active, less sedentary and improves their fitness and body composition: a quasi-experimental pilot study'.
- Author
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Chesham RA, Booth JN, Sweeney EL, Ryde GC, Gorely T, Brooks NE, and Moran CN
- Subjects
- Body Composition, Child, Humans, Physical Fitness, Pilot Projects, Exercise, Schools
- Abstract
We thank Daly-Smith et al. for taking the time to read the results of our pilot research study, describing it as an important and welcome contribution. Nonetheless, the authors argue six points against our conclusion. We contend that we addressed three of these points in our original discussion and disagree with their remaining points. Overall, their Commentary adds little to the topic of research into the Daily Mile™ that we had not already raised in our discussion. Additionally, they attribute statements to us that we did not make and ignore the raising of key issues in our original article. Given this, we stand by our original peer-reviewed conclusion that introducing the Daily Mile™ to the primary school day appears to be an effective intervention for increasing levels of moderate to vigorous physical activity, reducing sedentary time, increasing physical fitness and improving body composition, and that these findings have relevance for teachers, policy-makers, public health practitioners and health researchers.
- Published
- 2019
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42. Production of the K16 capsular polysaccharide by Acinetobacter baumannii ST25 isolate D4 involves a novel glycosyltransferase encoded in the KL16 gene cluster.
- Author
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Kenyon JJ, Arbatsky NP, Sweeney EL, Shashkov AS, Shneider MM, Popova AV, Hall RM, and Knirel YA
- Subjects
- Gene Expression Regulation, Bacterial, Gene Order, Genes, Bacterial, Genetic Linkage, Genetic Loci, Glycosyltransferases chemistry, Magnetic Resonance Spectroscopy, Polysaccharides, Bacterial chemistry, Acinetobacter baumannii genetics, Acinetobacter baumannii metabolism, Bacterial Capsules metabolism, Glycosyltransferases genetics, Glycosyltransferases metabolism, Multigene Family, Polysaccharides, Bacterial biosynthesis
- Abstract
A new capsular polysaccharide (CPS) biosynthesis gene cluster, KL16, was found in the genome sequence of a clinical Acinetobacter baumannii ST25 isolate, D4. The variable part of KL16 contains a module of genes for synthesis of 5,7-diacetamido-3,5,7,9-tetradeoxy-l-glycero-l-manno-non-2-ulosonic acid (5,7-di-N-acetylpseudaminic acid, Pse5Ac7Ac), a gene encoding ItrA3 that initiates the CPS synthesis with d-GlcpNAc, and two glycosyltransferase (Gtr) genes. The K16 CPS was studied by sugar analysis and Smith degradation along with 1D and 2D
1 H and13 C NMR spectroscopy, and shown to be built up of linear trisaccharide repeats containing d-galactose (d-Gal), N-acetyl-d-glucosamine (d-GlcNAc), and Pse5Ac7Ac. The d-Galp residue is linked to the d-GlcpNAc initiating sugar via a β-(1 → 3) linkage evidently formed by a Gtr5 variant, Gtr5K16 , encoded in KL16. This reveals an altered or relaxed substrate specificity of this variant as the majority of Gtr5-type glycosyltransferases have previously been shown to form a β-d-Galp-(1 → 3)-d-GalpNAc linkage. The β-Psep5Ac7Ac-(2 → 4)-d-Galp linkage is predicted to be formed by the other glycosyltransferase, Gtr37, which does not match members of any known glycosyltransferase family., (Copyright © 2019 Elsevier B.V. All rights reserved.)- Published
- 2019
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43. Levels of Mycoplasma genitalium Antimicrobial Resistance Differ by Both Region and Gender in the State of Queensland, Australia: Implications for Treatment Guidelines.
- Author
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Sweeney EL, Trembizki E, Bletchly C, Bradshaw CS, Menon A, Francis F, Langton-Lockton J, Nimmo GR, and Whiley DM
- Subjects
- Australia epidemiology, Epidemiological Monitoring, Female, Humans, Macrolides pharmacology, Male, Mutation, Mycoplasma Infections epidemiology, Mycoplasma genitalium genetics, Quinolines pharmacology, Sex Factors, Sexually Transmitted Diseases, Bacterial epidemiology, Anti-Bacterial Agents pharmacology, Drug Resistance, Bacterial genetics, Mycoplasma Infections microbiology, Mycoplasma genitalium isolation & purification, Sexually Transmitted Diseases, Bacterial microbiology
- Abstract
Mycoplasma genitalium is frequently associated with urogenital and rectal infections, with the number of cases of macrolide-resistant and quinolone-resistant M. genitalium infection continuing to increase. In this study, we examined the levels of resistance to these two common antibiotic treatments in geographically distinct locations in Queensland, Australia. Samples were screened for macrolide resistance-associated mutations using a commercially available kit (ResistancePlus MG; SpeeDx), and quinolone resistance-associated mutations were identified by PCR and DNA sequencing. Comparisons between antibiotic resistance mutations and location/gender were performed. The levels of M. genitalium macrolide resistance were high across both locations (62%). Quinolone resistance mutations were found in ∼10% of all samples, with a number of samples harboring mutations conferring resistance to both macrolides and quinolones. Quinolone resistance was higher in southeast Queensland than in north Queensland, and this was consistent in both males and females ( P = 0.007). The M. genitalium isolates in rectal swab samples from males harbored high levels of macrolide (75.9%) and quinolone (19%) resistance, with 15.5% harboring resistance to both classes of antibiotics. Overall, the lowest observed level of resistance was to quinolones in females from north Queensland (1.6%). These data highlight the high levels of antibiotic resistance in M. genitalium isolates within Queensland and the challenges faced by sexually transmitted infection clinicians in managing these infections. The data do, however, show that the levels of antibiotic resistance may differ between populations within the same state, which has implications for clinical management and treatment guidelines. These findings also support the need for ongoing antibiotic resistance surveillance and tailored treatment., (Copyright © 2019 American Society for Microbiology.)
- Published
- 2019
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44. The effect of breastmilk and saliva combinations on the in vitro growth of oral pathogenic and commensal microorganisms.
- Author
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Sweeney EL, Al-Shehri SS, Cowley DM, Liley HG, Bansal N, Charles BG, Shaw PN, Duley JA, and Knox CL
- Subjects
- Adult, Female, Humans, Hydrogen Peroxide pharmacology, Bacteria growth & development, Microbiota, Milk, Human, Mouth microbiology, Saliva
- Abstract
Neonates are exposed to microbes in utero and at birth, thereby establishing their microbiota (healthy microbial colonisers). Previously, we reported significant differences in the neonatal oral microbiota of breast-fed and formula-fed babies after first discovering a primal metabolic mechanism that occurs when breastmilk (containing the enzyme xanthine oxidase) and neonatal saliva (containing highly elevated concentrations of the substrates for xanthine oxidase: xanthine and hypoxanthine). The interaction of neonatal saliva and breast milk releases antibacterial compounds including hydrogen peroxide, and regulates the growth of bacteria. Using a novel in vitro experimental approach, the current study compared the effects of this unique metabolic pathway on a range of bacterial species and determined the period of time that microbial growth was affected. We demonstrated that microbial growth was inhibited predominately, immediately and for up to 24 hr following breastmilk and saliva mixing; however, some microorganisms were able to recover and continue to grow following exposure to these micromolar amounts of hydrogen peroxide. Interestingly, growth inhibition was independent of whether the organisms possessed a catalase enzyme. This study further confirms that this is one mechanism that contributes to the significant differences in the neonatal oral microbiota of breast-fed and formula-fed babies.
- Published
- 2018
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45. A retrospective pilot study to determine whether the reproductive tract microbiota differs between women with a history of infertility and fertile women.
- Author
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Wee BA, Thomas M, Sweeney EL, Frentiu FD, Samios M, Ravel J, Gajer P, Myers G, Timms P, Allan JA, and Huston WM
- Subjects
- Adult, Case-Control Studies, Female, Gestational Age, Humans, Lactobacillus isolation & purification, Microbiota, Middle Aged, Pilot Projects, Pregnancy, Retrospective Studies, Cervix Uteri microbiology, Endometrium microbiology, Infertility, Female, Pregnancy Trimesters, Vagina microbiology
- Abstract
Background: We know very little about the microbiota inhabiting the upper female reproductive tract and how it impacts on fertility., Aims: This pilot study aimed to examine the vaginal, cervical and endometrial microbiota for women with a history of infertility compared to women with a history of fertility., Materials and Methods: Using a retrospective case-control study design, women were recruited for collection of vaginal, cervical and endometrial samples. The microbiota composition was analysed by 16S ribosomal RNA (rRNA) gene amplification and endometrial expression of selected human genes by quantitative reverse transcription polymerase chain reaction., Results: Sixty-five specimens from the reproductive tract of 31 women were successfully analysed using 16S rRNA gene amplicon sequencing (16 controls and 15 cases). The dominant microbial community members were consistent in the vagina and cervix, and generally consistent with the endometrium although the relative proportions varied. We detected three major microbiota clusters that did not group by tissue location or case-control status. There was a trend that infertile women more often had Ureaplasma in the vagina and Gardnerella in the cervix. Testing for the expression of selected genes in the endometrium did not show evidence of correlation with case-control status, or with microbial community composition, although Tenascin-C expression correlated with a history of miscarriage., Conclusions: There is a need for further exploration of the endometrial microbiota, and how the microbiota members or profile interplays with fertility or assisted reproductive technologies., (© 2017 The Royal Australian and New Zealand College of Obstetricians and Gynaecologists.)
- Published
- 2018
- Full Text
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46. The Daily Mile makes primary school children more active, less sedentary and improves their fitness and body composition: a quasi-experimental pilot study.
- Author
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Chesham RA, Booth JN, Sweeney EL, Ryde GC, Gorely T, Brooks NE, and Moran CN
- Subjects
- Child, Child, Preschool, Female, Humans, Male, Pilot Projects, Schools, Body Composition physiology, Exercise physiology, Physical Fitness physiology, Sedentary Behavior
- Abstract
Background: The Daily Mile is a physical activity programme made popular by a school in Stirling, Scotland. It is promoted by the Scottish Government and is growing in popularity nationally and internationally. The aim is that each day, during class time, pupils run or walk outside for 15 min (~1 mile) at a self-selected pace. It is anecdotally reported to have a number of physiological benefits including increased physical activity, reduced sedentary behaviour, increased fitness and improved body composition. This study aimed to investigate these reports., Methods: We conducted a quasi-experimental repeated measures pilot study in two primary schools in the Stirling Council area: one school with, and one without, intention to introduce the Daily Mile. Pupils at the control school followed their usual curriculum. Of the 504 children attending the schools, 391 children in primary classes 1-7 (age 4-12 years) at the baseline assessment took part. The follow-up assessment was in the same academic year. Outcomes were accelerometer-assessed average daily moderate to vigorous intensity physical activity (MVPA) and average daily sedentary behaviour, 20-m shuttle run fitness test performance and adiposity assessed by the sum of skinfolds at four sites. Valid data at both time points were collected for 118, 118, 357 and 327 children, respectively, for each outcome., Results: After correction for age and gender, significant improvements were observed in the intervention school relative to the control school for MVPA, sedentary time, fitness and body composition. For MVPA, a relative increase of 9.1 min per day (95% confidence interval or 95%CI 5.1-13.2 min, standardised mean difference SMD = 0.407, p = 0.027) was observed. For sedentary time, there was a relative decrease of 18.2 min per day (10.7-25.7 min, SMD = 0.437, p = 0.017). For the shuttle run, there was a relative increase of 39.1 m (21.9-56.3, SMD = 0.236, p = 0.037). For the skinfolds, there was a relative decrease of 1.4 mm (0.8-2.0 mm, SMD = 0.246, p = 0.036). Similar results were obtained when a correction for socioeconomic groupings was included., Conclusions: The findings show that in primary school children, the Daily Mile intervention is effective at increasing levels of MVPA, reducing sedentary time, increasing physical fitness and improving body composition. These findings have relevance for teachers, policymakers, public health practitioners, and health researchers.
- Published
- 2018
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47. Skeletal muscle insulin signaling and whole-body glucose metabolism following acute sleep restriction in healthy males.
- Author
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Sweeney EL, Jeromson S, Hamilton DL, Brooks NE, and Walshe IH
- Subjects
- Adolescent, Adult, Humans, Insulin blood, Insulin Resistance, Male, Proto-Oncogene Proteins c-akt metabolism, Signal Transduction, Sleep Deprivation blood, Glucose metabolism, Insulin metabolism, Muscle, Skeletal metabolism, Sleep Deprivation metabolism
- Abstract
Sleep restriction is associated with impaired glucose metabolism and insulin resistance, however, the underlying mechanisms leading to this impairment are unknown. This study aimed to assess whether the decrease in insulin sensitivity observed after sleep restriction is accompanied by changes in skeletal muscle PKB activity. Ten healthy young males participated in this randomized crossover study which included two conditions separated by a 3-week washout period. Participants underwent two nights of habitual sleep (CON) and two nights of sleep which was restricted to 50% of habitual sleep duration (SR) in the home environment. Whole-body glucose tolerance and insulin sensitivity were assessed by an oral glucose tolerance test after the second night of each condition. Skeletal muscle tissue samples were obtained from the vastus lateralis to determine PKB activity. Findings displayed no effect of trial on plasma glucose concentrations ( P = 0.222). Plasma insulin area under the curve was higher after sleep restriction compared to the control ( P = 0.013). Matsuda index was 18.6% lower in the sleep restriction ( P = 0.010). Fold change in PKB activity from baseline tended to be lower in the sleep restriction condition at 30 min ( P = 0.098) and 120 min ( P = 0.087). In conclusion, we demonstrated decreased whole-body insulin sensitivity in healthy young males following two nights of sleep restriction. Skeletal muscle insulin signaling findings are inconclusive and require further study to examine any potential changes., (© 2017 The Authors. Physiological Reports published by Wiley Periodicals, Inc. on behalf of The Physiological Society and the American Physiological Society.)
- Published
- 2017
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48. Ureaplasma Species Multiple Banded Antigen (MBA) Variation Is Associated with the Severity of Inflammation In vivo and In vitro in Human Placentae.
- Author
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Sweeney EL, Kallapur SG, Meawad S, Gisslen T, Stephenson SA, Jobe AH, and Knox CL
- Subjects
- Bacterial Proteins genetics, Bacterial Proteins pharmacology, Blotting, Western, Chorioamnionitis immunology, Chorioamnionitis microbiology, Cytokines blood, DNA, Bacterial, Escherichia coli genetics, Female, Fetal Blood immunology, Host-Parasite Interactions, Humans, Interleukin-8 blood, NF-kappa B metabolism, Placenta microbiology, Polymerase Chain Reaction, Pregnancy, Premature Birth immunology, Premature Birth microbiology, Recombinant Proteins, Serotyping, THP-1 Cells drug effects, Ureaplasma genetics, Ureaplasma isolation & purification, Ureaplasma pathogenicity, Virulence Factors, Antigenic Variation genetics, Antigenic Variation immunology, Bacterial Proteins immunology, Inflammation, Placenta immunology, Ureaplasma metabolism
- Abstract
Background: The multiple banded antigen (MBA), a surface-exposed lipoprotein, is a proposed virulence factor of Ureaplasma spp. We previously demonstrated that the number of Ureaplasma parvum MBA size variants in amniotic fluid was inversely proportional to the severity of chorioamnionitis in experimentally infected pregnant sheep. However, the effect of ureaplasma MBA size variation on inflammation in human pregnancies has not been reported. Methods: Ureaplasmas isolated from the chorioamnion of pregnant women from a previous study ( n = 42) were speciated/serotyped and MBA size variation was demonstrated by PCR and western blot. Results were correlated with the severity of chorioamnionitis and cord blood cytokines. In vitro , THP-1-derived macrophages were exposed to recombinant-MBA proteins of differing sizes and NF-κB activation and cytokine responses were determined. Results: MBA size variation was identified in 21/32 (65.6%) clinical isolates (in 10 clinical isolates MBA size variation was unable to be determined). Any size variation (increase/decrease) of the MBA (regardless of Ureaplasma species or serovar) was associated with mild or absent chorioamnionitis ( P = 0.023) and lower concentrations of cord blood cytokines IL-8 ( P = 0.04) and G-CSF ( P = 0.008). In vitro , recombinant-MBA variants elicited different cytokine responses and altered expression of NF-κB p65. Conclusion: This study demonstrates that size variation of the ureaplasma MBA protein modulates the host immune response in vivo and in vitro .
- Published
- 2017
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49. The Human Ureaplasma Species as Causative Agents of Chorioamnionitis.
- Author
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Sweeney EL, Dando SJ, Kallapur SG, and Knox CL
- Subjects
- Chorioamnionitis immunology, Female, Humans, Infant, Newborn, Obstetric Labor, Premature etiology, Pregnancy, Ureaplasma classification, Virulence Factors immunology, Chorioamnionitis microbiology, Ureaplasma pathogenicity, Ureaplasma Infections microbiology
- Abstract
The human Ureaplasma species are the most frequently isolated microorganisms from the amniotic fluid and placentae of women who deliver preterm and are also associated with spontaneous abortions or miscarriages, neonatal respiratory diseases, and chorioamnionitis. Despite the fact that these microorganisms have been habitually found within placentae of pregnancies with chorioamnionitis, the role of Ureaplasma species as a causative agent has not been satisfactorily explained. There is also controversy surrounding their role in disease, particularly as not all women infected with Ureaplasma spp. develop chorioamnionitis. In this review, we provide evidence that Ureaplasma spp. are associated with diseases of pregnancy and discuss recent findings which demonstrate that Ureaplasma spp. are associated with chorioamnionitis, regardless of gestational age at the time of delivery. Here, we also discuss the proposed major virulence factors of Ureaplasma spp., with a focus on the multiple-banded antigen (MBA), which may facilitate modulation/alteration of the host immune response and potentially explain why only subpopulations of infected women experience adverse pregnancy outcomes. The information presented within this review confirms that Ureaplasma spp. are not simply "innocent bystanders" in disease and highlights that these microorganisms are an often underestimated pathogen of pregnancy., (Copyright © 2016 American Society for Microbiology.)
- Published
- 2016
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50. Deep sequencing of the 16S ribosomal RNA of the neonatal oral microbiome: a comparison of breast-fed and formula-fed infants.
- Author
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Al-Shehri SS, Sweeney EL, Cowley DM, Liley HG, Ranasinghe PD, Charles BG, Shaw PN, Vagenas D, Duley JA, and Knox CL
- Subjects
- Actinobacteria classification, Actinobacteria genetics, Actinobacteria isolation & purification, Bacteroidetes classification, Bacteroidetes genetics, Bacteroidetes isolation & purification, Female, Firmicutes classification, Firmicutes genetics, Firmicutes isolation & purification, Gestational Age, High-Throughput Nucleotide Sequencing, Humans, Infant, Infant, Newborn, Male, Phylogeny, Proteobacteria classification, Proteobacteria genetics, Proteobacteria isolation & purification, RNA, Ribosomal, 16S genetics, Streptococcus classification, Streptococcus genetics, Streptococcus isolation & purification, Breast Feeding, Infant Formula microbiology, Microbiota genetics, Milk, Human microbiology, Mouth microbiology, Saliva microbiology
- Abstract
In utero and upon delivery, neonates are exposed to a wide array of microorganisms from various sources, including maternal bacteria. Prior studies have proposed that the mode of feeding shapes the gut microbiota and, subsequently the child's health. However, the effect of the mode of feeding and its influence on the development of the neonatal oral microbiota in early infancy has not yet been reported. The aim of this study was to compare the oral microbiota of healthy infants that were exclusively breast-fed or formula-fed using 16S-rRNA gene sequencing. We demonstrated that the oral bacterial communities were dominated by the phylum Firmicutes, in both groups. There was a higher prevalence of the phylum Bacteroidetes in the mouths of formula-fed infants than in breast-fed infants (p = 0.01), but in contrast Actinobacteria were more prevalent in breast-fed babies; Proteobacteria was more prevalent in saliva of breast-fed babies than in formula-fed neonates (p = 0.04). We also found evidence suggesting that the oral microbiota composition changed over time, particularly Streptococcus species, which had an increasing trend between 4-8 weeks in both groups. This study findings confirmed that the mode of feeding influences the development of oral microbiota, and this may have implications for long-term human health.
- Published
- 2016
- Full Text
- View/download PDF
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