140 results on '"Suhonen, H"'
Search Results
2. Investigation of the porosity of L/LL4 ordinary chondrite Bjurböle using synchrotron radiation microtomography and scanning electron microscopy: Implications for parent body evolution
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Soini, A.-J., Kukkonen, I.T., Suhonen, H., Lukić, B., Kohout, T., and Luttinen, A.V.
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- 2023
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3. Characterization of texturized meat analogues containing native lupin flour and lupin protein concentrate/isolate
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Ramos-Diaz, J.M., Oksanen, S., Kantanen, K., Edelmann, J.M., Suhonen, H., Sontag-Strohm, T., Piironen, V., and Jouppila, K.
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- 2023
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4. Fibrous meat analogues containing oat fiber concentrate and pea protein isolate: Mechanical and physicochemical characterization
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Ramos Diaz, J.M., Kantanen, K., Edelmann, J.M., Suhonen, H., Sontag-Strohm, T., Jouppila, K., and Piironen, V.
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- 2022
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5. Novel fine particle reduction method for wood stoves based on high-temperature electric collection of naturally charged soot particles
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Suhonen, H., Laitinen, A., Kortelainen, M., Koponen, H., Kinnunen, N., Suvanto, M., Tissari, J., and Sippula, O.
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- 2021
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6. Alterations of mass density and 3D osteocyte lacunar properties in bisphosphonate-related osteonecrotic human jaw bone, a synchrotron μCT study
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Kazakia, Galateia, Hesse, B, Langer, M, Varga, P, Pacureanu, A, Dong, P, Schrof, S, Man̈nicke, N, Suhonen, H, Olivier, C, and Maurer, P
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Osteonecrosis of the jaw, in association with bisphosphonates (BRONJ) used for treating osteoporosis or cancer, is a severe and most often irreversible side effect whose underlying pathophysiological mechanisms remain largely unknown. Osteocytes are involv
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- 2014
7. Direct comparison between X-ray nanotomography and scanning electron microscopy for the microstructure characterization of a solid oxide fuel cell anode
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Quey, R., Suhonen, H., Laurencin, J., Cloetens, P., and Bleuet, P.
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- 2013
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8. Interconnectivity Explains High Canalicular Network Robustness between Neighboring Osteocyte Lacunae in Human Bone
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Bortel, E., Liam Grover, Neil Eisenstein, Seim, C., Suhonen, H., Pacureanu, A., Westenberger, P., Raum, K., Langer, M., Peyrin, F., owen addison, Bernhard Hesse, University of Helsinki, Department of Physics, Xploraytion [Berlin], University of Birmingham [Birmingham], Technical University Berlin, Helsingin yliopisto = Helsingfors universitet = University of Helsinki, European Synchroton Radiation Facility [Grenoble] (ESRF), Thermo Fisher Scientific Inc., Charité - UniversitätsMedizin = Charité - University Hospital [Berlin], Centre de Recherche en Acquisition et Traitement de l'Image pour la Santé (CREATIS), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon), Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Hospices Civils de Lyon (HCL)-Université Jean Monnet - Saint-Étienne (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Translational Innovation in Medicine and Complexity / Recherche Translationnelle et Innovation en Médecine et Complexité - UMR 5525 (TIMC ), VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes (UGA)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP ), Université Grenoble Alpes (UGA), King‘s College London, and Langer, Max
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[SDV.MHEP.AHA] Life Sciences [q-bio]/Human health and pathology/Tissues and Organs [q-bio.TO] ,ARCHITECTURE ,canalicular network ,[SDV.IB.IMA]Life Sciences [q-bio]/Bioengineering/Imaging ,osteocyte lacunar networks ,[SPI.MECA.BIOM]Engineering Sciences [physics]/Mechanics [physics.med-ph]/Biomechanics [physics.med-ph] ,FLUID-FLOW ,digestive system ,bone mineral homeostasis ,114 Physical sciences ,[SDV.IB.IMA] Life Sciences [q-bio]/Bioengineering/Imaging ,540 Chemie und zugeordnete Wissenschaften ,TISSUE ,[SPI.MECA.BIOM] Engineering Sciences [physics]/Mechanics [physics.med-ph]/Biomechanics [physics.med-ph] ,DENSITY ,ddc:540 ,[SDV.MHEP.AHA]Life Sciences [q-bio]/Human health and pathology/Tissues and Organs [q-bio.TO] ,MORPHOLOGY ,synchrotron nano computed tomography ,PERMEABILITY - Abstract
International audience; Osteocytes are the most frequent bone cells connected with each other through cell processes within tiny tubular-shaped canaliculi. The so-called osteocyte lacunar-canalicular network (LCN) plays a crucial role in bone remodeling and mineral homeostasis. Given the critical nature of these functions, it is herein hypothesized that the LCN must be structurally “overengineered” to provide network resilience. This hypothesis is tested by characterizing canalicular networks in human bone at the fundamental “building-block” level of LCN formed by two adjacent osteocytes. As the hierarchical micro- and macroscale structure of bone is influenced by anatomical location, subjected loads, and growth rate, three distinct tissue types are studied. These include femur, jaw, and heterotopic ossification (HO), a rapidly forming mineralized tissue found in soft tissue compartments following severe trauma. It is found that the LCNs at the fundamental level are composed of hundreds of canalicular segments but of only few separated groups of linked canaliculi (canalicular clusters), resulting in a strongly pronounced interconnectivity. Fluid permeability simulations on intact and artificially altered LCN suggest that the function of the LCN is not only to optimize rapid and efficient access to bone mineral, but also to maintain high permeability when inevitable local interruption of canaliculi occurs.
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- 2022
9. Resolution effect on the study of ductile damage using synchrotron X-ray tomography
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Landron, C., Maire, E., Adrien, J., Bouaziz, O., Di Michiel, M., Cloetens, P., and Suhonen, H.
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- 2012
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10. Characterisation of Solid Oxide Fuel Cell Ni–8YSZ substrate by synchrotron X-ray nano-tomography: from 3D reconstruction to microstructure quantification
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Laurencin, J., Quey, R., Delette, G., Suhonen, H., Cloetens, P., and Bleuet, P.
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- 2012
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11. Guided hierarchical X-ray nano-laminography enabling high-resolution in situ investigation of damage nucleation in alloy sheets
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Hurst, Mathias, Morgeneyer, Thilo, Helfen, Lukas, Suhonen, H, Buljac, Ante, Suuronen, Jussi-Petteri, Baumbach, Tilo, Haenschke, Daniel, Morgeneyer, Thilo, and LAMinographie in situ lors de chargements bi-axiaux pour l'étude multi-échelle de l'évolution d'enDommAgement dans les matériaux pour le transport - - LAMBDA2017 - ANR-17-CE08-0051 - AAPG2017 - VALID
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[SPI.MECA.MSMECA] Engineering Sciences [physics]/Mechanics [physics.med-ph]/Materials and structures in mechanics [physics.class-ph] ,[SPI.MECA.STRU] Engineering Sciences [physics]/Mechanics [physics.med-ph]/Structural mechanics [physics.class-ph] ,[SPI.MAT] Engineering Sciences [physics]/Materials ,[SPI.MECA.GEME] Engineering Sciences [physics]/Mechanics [physics.med-ph]/Mechanical engineering [physics.class-ph] ,[SPI.MECA.MEMA] Engineering Sciences [physics]/Mechanics [physics.med-ph]/Mechanics of materials [physics.class-ph] - Published
- 2022
12. Reptile-like physiology in Early Jurassic stem-mammals
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Newham, E, Gill, Pamela, Brewer, Philippa, Benton, MJ, Fernandez, Vincent, Gostling, NJ, Haberthür, D, Jernvall, J, Kankaanpää, T, Kallonen, A, Navarro, C, Pacureanu, A, Richards, K, Brown, KR, Schneider, P, Suhonen, H, Tafforeau, P, Williams, KA, Zeller-Plumhoff, B, Corfe, IJ, Newham, E, Gill, Pamela, Brewer, Philippa, Benton, MJ, Fernandez, Vincent, Gostling, NJ, Haberthür, D, Jernvall, J, Kankaanpää, T, Kallonen, A, Navarro, C, Pacureanu, A, Richards, K, Brown, KR, Schneider, P, Suhonen, H, Tafforeau, P, Williams, KA, Zeller-Plumhoff, B, and Corfe, IJ
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Despite considerable advances in knowledge of the anatomy, ecology and evolution of early mammals, far less is known about their physiology. Evidence is contradictory concerning the timing and fossil groups in which mammalian endothermy arose. To determine the state of metabolic evolution in two of the earliest stem-mammals, the Early Jurassic Morganucodon and Kuehneotherium, we use separate proxies for basal and maximum metabolic rate. Here we report, using synchrotron X-ray tomographic imaging of incremental tooth cementum, that they had maximum lifespans considerably longer than comparably sized living mammals, but similar to those of reptiles, and so they likely had reptilian-level basal metabolic rates. Measurements of femoral nutrient foramina show Morganucodon had blood flow rates intermediate between living mammals and reptiles, suggesting maximum metabolic rates increased evolutionarily before basal metabolic rates. Stem mammals lacked the elevated endothermic metabolism of living mammals, highlighting the mosaic nature of mammalian physiological evolution., Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/., NHM Repository
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- 2020
13. Quantifying complex micro‐topography of degenerated articular cartilage surface by contrast‐enhanced micro‐computed tomography and parametric analyses
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Ylitalo, T. (Tuomo), Finnilä, M. A. (Mikko A.J.), Gahunia, H. K. (Harpal K.), Karhula, S. S. (Sakari S.), Suhonen, H. (Heikki), Valkealahti, M. (Maarit), Lehenkari, P. (Petri), Hæggström, E. (Edward), Pritzker, K. P. (Kenneth P.H.), Saarakkala, S. (Simo), and Nieminen, H. J. (Heikki J.)
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topography ,3D imaging ,surface roughness ,articular cartilage ,microcomputed X‐ray tomography - Abstract
One of the earliest changes in osteoarthritis (OA) is a surface discontinuity of the articular cartilage (AC), and these surface changes become gradually more complex with OA progression. We recently developed a contrast enhanced micro‐computed tomography (μCT) method for visualizing AC surface in detail. The present study aims to introduce a μCT analysis technique to parameterize these complex AC surface features and to demonstrate the feasibility of using these parameters to quantify degenerated AC surface. Osteochondral plugs (n = 35) extracted from 19 patients undergoing joint surgery were stained with phosphotungstic acid and imaged using μCT. The surface micro‐topography of AC was analyzed with developed method. Standard root mean square roughness (Rq) was calculated as a reference, and the Area Under Curve (AUC) for receiver operating characteristic analysis was used to compare the acquired quantitative parameters with semi‐quantitative visual grading of μCT image stacks. The parameters quantifying the complex micro‐topography of AC surface exhibited good sensitivity and specificity in identifying surface continuity (AUC: 0.93, [0.80 0.99]), fissures (AUC: 0.94, [0.83 0.99]) and fibrillation (AUC: 0.98, [0.88 1.0]). Standard Rq was significantly smaller compared with the complex roughness (CRq) already with mild surface changes with all surface reference parameters − continuity, fibrillation, and fissure sum. Furthermore, only CRq showed a significant difference when comparing the intact surface with lowest fissure sum score. These results indicate that the presented method for evaluating complex AC surfaces exhibit potential to identify early OA changes in superficial AC and is dynamic throughout OA progression.
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- 2019
14. Terveydenhuollon palveluiden ulkoistaminen Suomessa:systemaattinen kirjallisuuskatsaus
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Suhonen, H. (Harri), Rantakokko, P. (Piia), and Suhonen, M. (Marjo)
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outsourcing ,Health care ,health services - Abstract
in English, text in Finnish The aim of the article is to generate comprehensive data on the basis of previous evidence on the outsourcing of healthcare services in Finland. The outsourced healthcare services specifically refer to those operations that were previously provided by municipalities as their own service, and which were subsequently transferred either to an external service provider, or provided as a partially or fully outsourced service. In this article, the term external service provider refers to an independent provider, such as a commercial enterprise, a private sector service provider, or a third sector service provider. The research questions are as follows: 1. Which scientific perspectives have previously been applied to the study of outsourcing, and what are the types of methodology that have been employed in such research efforts? 2. Which specific topics have been investigated, and what are their main research findings? A systematic literature review was carried out, which resulted in 16 publications meeting the acceptance criteria. The data were analysed by qualitative content analysis. The results benefit healthcare management for the purposes of planning outsourcing activities. The results can also further be applied to direct future research studies into related topics. In Finland, research focusing on the outsourcing activities of healthcare services has been studied from the perspectives of health sciences, administrative science, medicine, and social sciences. Both qualitative and quantitative approaches have been employed. The most common method of data collection concerned interviews and questionnaires, with the resulting evidence being analysed by diverse methods. For qualitative studies, the most common methods of data analysis were content analysis and frame analysis, while in quantitative studies, descriptive methods were used, which were supplemented by several statistical methods. The main results of the existing evidence emphasised both the views and expectancies of the officials and politicians with respect to the outsourced healthcare services. In this article, these findings are discussed in the context of a decision-making theme. In addition, two further themes were identified from the data, namely know-how and the personnel and client perspectives. In Finland, the effects of outsourcing of healthcare services has been studied in a comprehensive and multifaceted manner especially in light of decision-making. An abundance of evidence also exists on the effects of outsourcing on the wellbeing of personnel and the quality of working atmosphere. On the other hand, research evidence concerning other aspects of outsourcing of healthcare services is scarce, and subsequently.
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- 2019
15. Quantitative Imaging of Regional Aerosol Deposition, Lung Ventilation and Morphology by Synchrotron Radiation CT
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Porra, L., Degrugilliers, L., Broche, Ludovic, Albu, G., Strengell, S., Suhonen, H., Fodor, G. H., Petak, F., Suortti, P., Habre, W., Sovijärvi, A. R. A., Bayat, S., Porra, L., Degrugilliers, L., Broche, Ludovic, Albu, G., Strengell, S., Suhonen, H., Fodor, G. H., Petak, F., Suortti, P., Habre, W., Sovijärvi, A. R. A., and Bayat, S.
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To understand the determinants of inhaled aerosol particle distribution and targeting in the lung, knowledge of regional deposition, lung morphology and regional ventilation, is crucial. No single imaging modality allows the acquisition of all such data together. Here we assessed the feasibility of dual-energy synchrotron radiation imaging to this end in anesthetized rabbits; both in normal lung (n = 6) and following methacholine (MCH)-induced bronchoconstriction (n = 6), a model of asthma. We used K-edge subtraction CT (KES) imaging to quantitatively map the regional deposition of iodine-containing aerosol particles. Morphological and regional ventilation images were obtained, followed by quantitative regional iodine deposition maps, after 5 and 10 minutes of aerosol administration. Iodine deposition was markedly inhomogeneous both in normal lung and after induced bronchoconstrition. Deposition was significantly reduced in the MCH group at both time points, with a strong dependency on inspiratory flow in both conditions (R-2 = 0.71; p < 0.0001). We demonstrate for the first time, the feasibility of KES CT for quantitative imaging of lung deposition of aerosol particles, regional ventilation and morphology. Since these are among the main factors determining lung aerosol deposition, we expect this imaging approach to bring new contributions to the understanding of lung aerosol delivery, targeting, and ultimately biological efficacy.
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- 2018
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16. Silver birch ability to refill fully embolised xylem conduits under tension
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Salmon, Y., primary, Lintunen, A., additional, Lindfors, L., additional, Suhonen, H., additional, Sevanto, S., additional, Vesala, T., additional, and Hölttä, T., additional
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- 2018
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17. Quantitative Imaging of Regional Aerosol Deposition, Lung Ventilation and Morphology by Synchrotron Radiation CT
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Porra, L., primary, Dégrugilliers, L., additional, Broche, L., additional, Albu, G., additional, Strengell, S., additional, Suhonen, H., additional, Fodor, G. H., additional, Peták, F., additional, Suortti, P., additional, Habre, W., additional, Sovijärvi, A. R. A., additional, and Bayat, S., additional
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- 2018
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18. Melanosomes in pigmented epithelia maintain eye lens transparency during zebrafish embryonic development
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Takamiya, M., Xu, F., Suhonen, H., Gourain, V., Yang, L., Ho, N.Y., Helfen, L., Schröck, A., Etard, C., Grabher, C., Rastegar, S., Schlunck, G., Reinhard, T., Baumbach, T., Strähle, U., Karlsruhe Inst Technol, Inst Toxicol & Genet, Postfach 3640, D-76021 Karlsruhe, Germany, Karlsruhe Inst Technol, Inst Photon Sci & Synchrotron Radiat IPS, D-76021 Karlsruhe, Germany, Univ Helsinki, Dept Phys, Helsinki, Finland, European Synchrotron Radiation Facility (ESRF), Chinese Res Inst Environm Sci, Dept Environm Pollut & Hlth, State Key Lab Environm Criteria & Risk Assessment, Beijing 100012, Peoples R China, Univ Freiburg, Med Ctr, Ctr Eye, Killianstr 5, D-79106 Freiburg, Germany, and Department of Physics
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Life sciences ,biology ,NUCLEAR CATARACT ,MELANIN ,CRYSTALLINS ,genetic structures ,[SDV]Life Sciences [q-bio] ,116 Chemical sciences ,Embryonic Development ,114 Physical sciences ,Article ,Cataract ,ZINC ,ddc:570 ,Lens, Crystalline ,Animals ,FLUORESCENCE ,Zebrafish ,AFFINITY ,Melanosomes ,IRON ,Spectrometry, X-Ray Emission ,Pigments, Biological ,eye diseases ,Trace Elements ,Oxidative Stress ,Embryonic induction ,Mechanisms of disease ,CELLS ,sense organs ,FERRITIN ,X-ray tomography - Abstract
International audience; Altered levels of trace elements are associated with increased oxidative stress that is eventually responsible for pathologic conditions. Oxidative stress has been proposed to be involved in eye diseases, including cataract formation. We visualized the distribution of metals and other trace elements in the eye of zebrafish embryos by micro X-ray fluorescence (mu-XRF) imaging. Many elements showed highest accumulation in the retinal pigment epithelium (RPE) of the zebrafish embryo. Knockdown of the zebrafish brown locus homologues tyrp1a/b eliminated accumulation of these elements in the RPE, indicating that they are bound by mature melanosomes. Furthermore, albino (slc45a2) mutants, which completely lack melanosomes, developed abnormal lens reflections similar to the congenital cataract caused by mutation of the myosin chaperon Unc45b, and an in situ spin trapping assay revealed increased oxidative stress in the lens of albino mutants. Finally transplanting a wildtype lens into an albino mutant background resulted in cataract formation. These data suggest that melanosomes in pigment epithelial cells protect the lens from oxidative stress during embryonic development, likely by buffering trace elements
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- 2016
19. Synchrotron radiation nanotomography with phase contrast - A new dimension in the analysis of the osteocyte lacuno-canalicuar network and the extracellular bone matrix
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Hesse, B., Varga, P., Schrof, S., Männicke, N., Pacureanu, A., Langer, M., Suhonen, H., Maurer, P., Cloetens, P., Peyrin, F., Raum, K., European Synchrotron Radiation Facility (ESRF), AO Research Institute, Julius Wolff Institute and Center for Musculoskeletal Surgery, Charité - UniversitätsMedizin = Charité - University Hospital [Berlin], Imagerie Tomographique et Radiothérapie, Centre de Recherche en Acquisition et Traitement de l'Image pour la Santé (CREATIS), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon), Institut National des Sciences Appliquées (INSA)-Université de Lyon-Institut National des Sciences Appliquées (INSA)-Hospices Civils de Lyon (HCL)-Université Jean Monnet [Saint-Étienne] (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Institut National des Sciences Appliquées (INSA)-Université de Lyon-Institut National des Sciences Appliquées (INSA)-Hospices Civils de Lyon (HCL)-Université Jean Monnet [Saint-Étienne] (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), and linikum Bremerhaven-Reinkenheide
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mineralisation ,[SDV.IB.IMA]Life Sciences [q-bio]/Bioengineering/Imaging ,extracellular matrix ,Kanalikuli ,osteocyte ,canaliculi ,phase-contrast ,lacuna ,Mineralisierung ,Lakune ,Synchrotron ,Phasenkontrast ,Nano-Tomografie ,Osteozyt ,extrazelluläre Matrix ,nano-tomography - Abstract
International audience; Gesunder humaner Knochen unterliegt einem permanenten Umbau, um sich den mechanischen Anforderungen anzupassen, Mikrofrakturen zu reparieren und das Mineralgleichgewicht zu erhalten. Der Umbauprozess der extrazellulären Matrix wird durch Osteoblasten und Osteoklasten realisiert. Eine bedeutende Rolle bei der Regulierung der Osteoklasten- und Osteoblastenaktivität wird den Osteozyten zugesprochen, welche in einem komplexen Netzwerk von Zelllakunen und Kanalikuli die extrazelluläre Matrix durchsetzen. Auf Phasenkontrast basierende hochauflösende Nano-Computertomografie erlaubt erstmals, sowohl das Zellnetzwerk als auch die direkt angrenzende mineralisierte Matrix in Untersuchungsvolumen, die hinsichtlich ihrer Größe als repräsentativ angesehen werden können, im nativen Zustand (nicht demineralisiert, nicht eingebettet) zu untersuchen.; Healthy human bone tissue undergoes a continuous remodeling process to i) repair microdamages, ii) adapt to mechanical boundary conditions, and iii) maintain a constant serum calcium level. Bone remodeling is realized by specialized bone synthesizing and resorbing cells, i. e. osteoblasts and osteoclasts, respectively. Osteocytes play an important role in the regulation of osteoblast and osteoclast activities. Osteocytes are embedded in the extracellular matrix in a complex porous lacunar-canalicular network (LCN). Recently developed high-fidelity phase-contrast nanotomography with synchrotron radiation x-ray sources enabled for the first time the simultaneous assessment of both, LCN and the adjacent extracellular mineralized matrix in close-to-native sample conditions.
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- 2016
20. USAXS and SAXS from cancer-bearing breast tissue samples
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Fernandez, M, Suhonen, H, Keyrilainen, J, Bravin, A, Fiedler, S, Karjalainen-Lindsberg, M, Leidenius, A, von Smitten, K, Suortti, P, Fernandez M, Suhonen H, Keyrilainen J, Bravin A, Fiedler S, Karjalainen-Lindsberg M-L, Leidenius A, von Smitten K, Suortti P, Fernandez, M, Suhonen, H, Keyrilainen, J, Bravin, A, Fiedler, S, Karjalainen-Lindsberg, M, Leidenius, A, von Smitten, K, Suortti, P, Fernandez M, Suhonen H, Keyrilainen J, Bravin A, Fiedler S, Karjalainen-Lindsberg M-L, Leidenius A, von Smitten K, and Suortti P
- Abstract
USAXS and SAXS patterns from cancer-bearing human breast tissue samples were recorded at beamline ID02 of the ESRF using a Bonse-Hart camera and a pinhole camera. The samples were classified as being ductal carcinoma, grade II, and ductal carcinoma in situ, partly invasive. The samples included areas of healthy collagen, invaded collagen, necrotic ducts with calcifications, and adipose tissue. The scattering patterns were analyzed in different ways to separate the scattering contribution and the direct beam from the observed rocking curve (RC) of the analyzer. It was found that USAXS from all tissues was weak, and the effects on the analyzer RC were observed only in the low-intensity tails of the patterns. The intrinsic RC was convolved with different model functions for the impulse response of the sample, and the best fit with experiment was obtained by the Pearson VII function. Significantly different distributions for the Pearson exponent m were obtained in benign and malignant regions of the samples. For a comparison with analyzer-based imaging (ABI) or diffraction enhanced imaging (DEI) a "long-slit" integration of the patterns was performed, and this emphasized the scattering contribution in the tails of the rocking curve.
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- 2008
21. Refraction and scattering of X-rays in analyzer based imaging
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Suhonen, H, Fernandez, M, Bravin, A, Keyriläinen, J, Suortti, P, Suhonen H, Fernandez M, Bravin A, Keyriläinen J, Suortti P, Suhonen, H, Fernandez, M, Bravin, A, Keyriläinen, J, Suortti, P, Suhonen H, Fernandez M, Bravin A, Keyriläinen J, and Suortti P
- Abstract
A new algorithm is introduced for separation of the scattered and non-scattered parts of a monochromatic and well collimated synchrotron radiation beam transmitted through a sample and analyzed by reflection from a perfect crystal in the non-dispersive setting. The observed rocking curve is described by the Voigt function, which is a convolution of Lorentzian and Gaussian functions. For the actual fitting, pseudo-Voigtians are used. The fit yields the scaled integrated intensity (the effect of absorption), the center of the rocking curve (the effect of refraction), and the intensity of the transmitted beam is divided into the scattered and non-scattered parts. The algorithm is tested using samples that exhibit various degrees of refraction and scattering. Very close fits are achieved in an angular range that is 15 times the full width at half-maximum of the intrinsic rocking curve of the analyzer. The scattering part has long tails of Lorentzian shape owing to the 'long-slit geometry' of the set-up. Quantitative images of absorption, refraction and scattering are constructed and compared with results of earlier treatments. The portion of scattering and the second moment of the observed rocking curve both increase linearly with the sample thickness and yield identical maps of the effects of scattering. The effects of refraction are calculated using the geometrical optics approximation, and a good agreement with experiment is found. The fits with reduced number of data points (minimum number is five) yield closely the same results as fits to the full data set.
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- 2007
22. Semi-automatic 3D surface characterization of degenerated articular cartilage
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Ylitalo, T.J., primary, Gahunia, H., additional, Karhula, S., additional, Finnilä, M., additional, Suhonen, H., additional, Hæggström, E., additional, Pritzker, K.P., additional, Saarakkala, S., additional, and Niemimen, H.J., additional
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- 2016
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23. Synchrotron-Nano-Tomografie mit Phasenkontrast
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Hesse, B., primary, Varga, P., primary, Schrof, S., primary, Männicke, N., primary, Pacureanu, A., primary, Langer, M., primary, Suhonen, H., primary, Maurer, P., primary, Cloetens, P., primary, Peyrin, F., primary, and Raum, K., additional
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- 2016
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24. Extending validity of X-ray in-line phase tomography to heterogeneous objects
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Langer, M., Hesse, B., Pacureanu, A., Suhonen, H., Cloetens, P., Raum, K., Peyrin, F., European Synchrotron Radiation Facility (ESRF), Centre de Recherche en Acquisition et Traitement de l'Image pour la Santé (CREATIS), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon), Institut National des Sciences Appliquées (INSA)-Université de Lyon-Institut National des Sciences Appliquées (INSA)-Hospices Civils de Lyon (HCL)-Université Jean Monnet [Saint-Étienne] (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Disciplinary Domain of Science and Technology, Uppsala University, Julius Wolff Institute and Center for Musculoskeletal Surgery, and Charité - UniversitätsMedizin = Charité - University Hospital [Berlin]
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- 2013
25. THE 3D ORIENTATION OF MINERALIZED COLLAGEN FIBRILS IN HUMAN LAMELLAR BONE AND ITS MECHANICAL CONSEQUENCES
- Author
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Varga, P., Pacureanu, A., Langer, M., Suhonen, H., Hesse, B., Grimal, Q., Cloetens, P., Raum, K., Peyrin, F., Julius Wolff Institute and Center for Musculoskeletal Surgery, Charité - UniversitätsMedizin = Charité - University Hospital [Berlin], European Synchrotron Radiation Facility (ESRF), Disciplinary Domain of Science and Technology, Uppsala University, Centre de Recherche en Acquisition et Traitement de l'Image pour la Santé (CREATIS), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon), Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Hospices Civils de Lyon (HCL)-Université Jean Monnet [Saint-Étienne] (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Laboratoire d'Imagerie Paramétrique (LIP), Université Pierre et Marie Curie - Paris 6 (UPMC)-IFR58-Centre National de la Recherche Scientifique (CNRS), and Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Université Jean Monnet - Saint-Étienne (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,ComputingMilieux_MISCELLANEOUS - Abstract
International audience
- Published
- 2013
26. Design of priors for X-ray in-line phase tomography
- Author
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Langer, M., Cloetens, P., Hesse, B., Suhonen, H., Pacureanu, A., Raum, K., Peyrin, F., European Synchrotron Radiation Facility (ESRF), Imagerie Tomographique et Radiothérapie, Centre de Recherche en Acquisition et Traitement de l'Image pour la Santé (CREATIS), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon), Institut National des Sciences Appliquées (INSA)-Université de Lyon-Institut National des Sciences Appliquées (INSA)-Hospices Civils de Lyon (HCL)-Université Jean Monnet [Saint-Étienne] (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Institut National des Sciences Appliquées (INSA)-Université de Lyon-Institut National des Sciences Appliquées (INSA)-Hospices Civils de Lyon (HCL)-Université Jean Monnet [Saint-Étienne] (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Disciplinary Domain of Science and Technology, Uppsala University, Julius Wolff Institute and Center for Musculoskeletal Surgery, and Charité - UniversitätsMedizin = Charité - University Hospital [Berlin]
- Subjects
[SDV.IB.IMA]Life Sciences [q-bio]/Bioengineering/Imaging ,ComputingMilieux_MISCELLANEOUS - Abstract
International audience
- Published
- 2013
27. Non-destructive and Multi-modal 3D Imaging of Biological Materials
- Author
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Cloetens, P., Suhonen, H., Bay, A., Bohic, S., Fleck, C., Langer, M., Pacureanu, A., Peyrin, F., Rack, A., Vigneron J., P., Zaslansky, P., European Synchrotron Radiation Facility (ESRF), Université de Namur [Namur] (UNamur), Grenoble Institut des Neurosciences (GIN), Université Joseph Fourier - Grenoble 1 (UJF)-Institut National de la Santé et de la Recherche Médicale (INSERM), Technische Universität Berlin (TU), Imagerie Tomographique et Radiothérapie, Centre de Recherche en Acquisition et Traitement de l'Image pour la Santé (CREATIS), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon), Institut National des Sciences Appliquées (INSA)-Université de Lyon-Institut National des Sciences Appliquées (INSA)-Hospices Civils de Lyon (HCL)-Université Jean Monnet [Saint-Étienne] (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), and Institut National des Sciences Appliquées (INSA)-Université de Lyon-Institut National des Sciences Appliquées (INSA)-Hospices Civils de Lyon (HCL)-Université Jean Monnet [Saint-Étienne] (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
[SDV.IB.IMA]Life Sciences [q-bio]/Bioengineering/Imaging ,ComputingMilieux_MISCELLANEOUS - Abstract
International audience
- Published
- 2012
28. Resolution dependence of petrophysical parameters derived from X-ray tomography of chalk
- Author
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Müter, Dirk, Sørensen, Henning Osholm, Jha, Diwaker, Harti, Ralph Patrick, Dalby, Kim Nicole, Suhonen, H., Feidenhans'l, Robert Krarup, Engstrøm, F., Stipp, Susan Louise Svane, Müter, Dirk, Sørensen, Henning Osholm, Jha, Diwaker, Harti, Ralph Patrick, Dalby, Kim Nicole, Suhonen, H., Feidenhans'l, Robert Krarup, Engstrøm, F., and Stipp, Susan Louise Svane
- Published
- 2014
29. Resolution dependence of petrophysical parameters derived from X-ray tomography of chalk
- Author
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Müter, D., primary, Sørensen, H. O., additional, Jha, D., additional, Harti, R., additional, Dalby, K. N., additional, Suhonen, H., additional, Feidenhans'l, R., additional, Engstrøm, F., additional, and Stipp, S. L. S., additional
- Published
- 2014
- Full Text
- View/download PDF
30. Reconstruction of wave front and object for inline holography from a set of detection planes
- Author
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Hagemann, J., primary, Robisch, A.-L., additional, Luke, D. R., additional, Homann, C., additional, Hohage, T., additional, Cloetens, P., additional, Suhonen, H., additional, and Salditt, T., additional
- Published
- 2014
- Full Text
- View/download PDF
31. Phase retrieval in in-line x-ray phase contrast imaging based on total variation minimization
- Author
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Batenburg, K.J. (Joost), Kostenko, A. (Alexander), Suhonen, H., Offerman, S.E., Vliet, L.J. (Lucas) van, Batenburg, K.J. (Joost), Kostenko, A. (Alexander), Suhonen, H., Offerman, S.E., and Vliet, L.J. (Lucas) van
- Published
- 2013
32. Phase retrieval in in-line x-ray phase contrast imaging based on total variation minimization
- Author
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Kostenko, A. (author), Batenburg, K.J. (author), Suhonen, H. (author), Offerman, S.E. (author), Van Vliet, L.J. (author), Kostenko, A. (author), Batenburg, K.J. (author), Suhonen, H. (author), Offerman, S.E. (author), and Van Vliet, L.J. (author)
- Abstract
State-of-the-art techniques for phase retrieval in propagation based X-ray phase-contrast imaging are aiming to solve an underdetermined linear system of equations. They commonly employ Tikhonov regularization – an L2-norm regularized deconvolution scheme – despite some of its limitations. We present a novel approach to phase retrieval based on Total Variation (TV) minimization. We incorporated TV minimization for deconvolution in phase retrieval using a variety of the most common linear phase-contrast models. The results of our TV minimization was compared with Tikhonov regularized deconvolution on simulated as well as experimental data. The presented method was shown to deliver improved accuracy in reconstructions based on a single distance as well as multiple distance phase-contrast images corrupted by noise and hampered by errors due to nonlinear imaging effects., IST/Imaging Science and Technology, Applied Sciences
- Published
- 2013
- Full Text
- View/download PDF
33. Toward high-contrast breast CT at low radiation dose
- Author
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Keyrilainen, J, Fernandez, M, Karjalainen-Lindsberg, M, Virkkunen, P, Leidenius, M, von Smitten, K, Sipila, P, Fiedler, S, Suhonen, H, Suortti, P, Bravin, A, Keyrilainen Jani, Fernandez Manuel, Karjalainen-Lindsberg Marja-Liisa, Virkkunen Pekka, Leidenius Marjut, von Smitten Karl, Sipila Petri, Fiedler Stefan, Suhonen Heikki, Suortti Pekka, Bravin A, Keyrilainen, J, Fernandez, M, Karjalainen-Lindsberg, M, Virkkunen, P, Leidenius, M, von Smitten, K, Sipila, P, Fiedler, S, Suhonen, H, Suortti, P, Bravin, A, Keyrilainen Jani, Fernandez Manuel, Karjalainen-Lindsberg Marja-Liisa, Virkkunen Pekka, Leidenius Marjut, von Smitten Karl, Sipila Petri, Fiedler Stefan, Suhonen Heikki, Suortti Pekka, and Bravin A
- Abstract
This study was approved by the local research ethics committee, and patient informed consent was obtained. The purpose of this study was to demonstrate that high-spatial- resolution low-dose analyzer-based x-ray computed tomography (CT) can substantially improve the radiographic contrast of breast tissue in vitro when compared with that attained by using diagnostic mammography and CT. An excised human breast tumor was examined by using analyzer-based x-ray imaging with synchrotron radiation. The correspondence between analyzer-based x-ray images and diagnostic mammograms, CT images, and histopathologic findings was determined. Calcifications and fine details of soft tissue, which are at the contrast detection limit on diagnostic mammograms, are clearly visible on planar analyzer-based x-ray images. Analyzer-based x-ray CT yields high contrast from smoothly varying internal structures, such as tumorous mass lesions, corresponding to information on actual structures seen at histopathologic analysis. The mean glandular dose of 1.9 mGy in analyzer-based x-ray CT is approximately equivalent to the dose administered during single-view screening mammography. The improved visibility of mammographically indistinguishable lesions in vitro suggests that analyzer-based x-ray CT may be a valuable method in radiographic evaluation of the breast, thereby justifying further investigations.
- Published
- 2008
34. Correlative Imaging of Structural and Elemental Composition of Bacterial Biofilms
- Author
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Yang, Y, primary, Heine, R, additional, Xu, F, additional, Suhonen, H, additional, Helfen, L, additional, Rosenhahn, A, additional, Gorniak, T, additional, Kirchen, S, additional, Schwartz, T, additional, and Baumbach, T, additional
- Published
- 2013
- Full Text
- View/download PDF
35. Gas phase synthesis of encapsulated iron oxide–titanium dioxide composite nanoparticles by spray pyrolysis
- Author
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Harra, J., primary, Nikkanen, J.-P., additional, Aromaa, M., additional, Suhonen, H., additional, Honkanen, M., additional, Salminen, T., additional, Heinonen, S., additional, Levänen, E., additional, and Mäkelä, J.M., additional
- Published
- 2013
- Full Text
- View/download PDF
36. Nano-laminography for three-dimensional high-resolution imaging of flat specimens
- Author
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Helfen, L, primary, Xu, F, additional, Suhonen, H, additional, Urbanelli, L, additional, Cloetens, P, additional, and Baumbach, T, additional
- Published
- 2013
- Full Text
- View/download PDF
37. Non-destructive 3-D reconstruction of the martensitic phase in a dual-phase steel using synchrotron holotomography
- Author
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Landron, C., primary, Maire, E., additional, Adrien, J., additional, Suhonen, H., additional, Cloetens, P., additional, and Bouaziz, O., additional
- Published
- 2012
- Full Text
- View/download PDF
38. Dynamically-figured mirror system for high-energy nanofocusing at the ESRF
- Author
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Barrett, R., primary, Baker, R., additional, Cloetens, P., additional, Dabin, Y., additional, Morawe, C., additional, Suhonen, H., additional, Tucoulou, R., additional, Vivo, A., additional, and Zhang, L., additional
- Published
- 2011
- Full Text
- View/download PDF
39. Mechanisms of Altered Airway Mechanics Following Acute Cigarette Smoke Inhalation in Rabbits.
- Author
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Bayat, S, primary, Porra, L, additional, Petak, F, additional, Janosi, TZ, additional, Bertrand, D, additional, Sovijarvi, A, additional, Suortti, P, additional, Suhonen, H, additional, Strengell, S, additional, Neitola, K, additional, Sipila, M, additional, Laakso, L, additional, Hantos, Z, additional, and Habre, W, additional
- Published
- 2009
- Full Text
- View/download PDF
40. Estimation of the Distribution of Specific Ventilation in Histamine-Challenged Rabbit Based on Single Xe-Enhanced Synchrotron CT Images.
- Author
-
Porra, L, primary, Bayat, S, additional, Strengell, S, additional, Suhonen, H, additional, Sovijarvi, AR, additional, and Suortti, P, additional
- Published
- 2009
- Full Text
- View/download PDF
41. Distinctive Bronchoconstriction Induced by Intravenous or Inhaled Methacholine in Rabbits Studied by Synchrotron Radiation CT.
- Author
-
Bayat, S, primary, Strengell, S, additional, Suhonen, H, additional, Porra, L, additional, Suortti, P, additional, and Sovijarvi, AR, additional
- Published
- 2009
- Full Text
- View/download PDF
42. USAXS and SAXS from cancer-bearing breast tissue samples
- Author
-
Fernández, M., primary, Suhonen, H., additional, Keyriläinen, J., additional, Bravin, A., additional, Fiedler, S., additional, Karjalainen-Lindsberg, M.-L., additional, Leidenius, M., additional, von Smitten, K., additional, and Suortti, P., additional
- Published
- 2008
- Full Text
- View/download PDF
43. Simultaneousin vivosynchrotron radiation computed tomography of regional ventilation and blood volume in rabbit lung using combined K-edge and temporal subtraction
- Author
-
Suhonen, H, primary, Porra, L, additional, Bayat, S, additional, Sovijärvi, A R A, additional, and Suortti, P, additional
- Published
- 2008
- Full Text
- View/download PDF
44. Influence of wood species on toxicity of log-wood stove combustion aerosols: A parallel animal and air-liquid interface cell exposure study on spruce and pine smoke
- Author
-
Ihantola, T., Di Bucchianico, S., Happo, M., Ihalainen, M., Uski, O., Bauer, S., Kuuspalo, K., Sippula, O., Tissari, J., Oeder, S., Hartikainen, A., Rönkkö, T. J., Martikainen, M.-V., Huttunen, K., Vartiainen, P., Suhonen, H., Kortelainen, M., Lamberg, H., Leskinen, A., Sklorz, M., Michalke, B., Dilger, M., Weiss, C., Dittmar, G., Beckers, J., Irmler, M., Buters, J., Candeias, J., Czech, H., Yli-Pirilä, P., Abbaszade, G., Jakobi, G., Orasche, J., Schnelle-Kreis, J., Kanashova, T., Karg, E., Streibel, T., Passig, J., Hakkarainen, H., Jokiniemi, J., Zimmermann, R., Hirvonen, M.-R., and Jalava, P. I.
- Subjects
13. Climate action ,complex mixtures - Abstract
Background Wood combustion emissions have been studied previously either by in vitro or in vivo models using collected particles, yet most studies have neglected gaseous compounds. Furthermore, a more accurate and holistic view of the toxicity of aerosols can be gained with parallel in vitro and in vivo studies using direct exposure methods. Moreover, modern exposure techniques such as air-liquid interface (ALI) exposures enable better assessment of the toxicity of the applied aerosols than, for example, the previous state-of-the-art submerged cell exposure techniques. Methods We used three different ALI exposure systems in parallel to study the toxicological effects of spruce and pine combustion emissions in human alveolar epithelial (A549) and murine macrophage (RAW264.7) cell lines. A whole-body mouse inhalation system was also used to expose C57BL/6 J mice to aerosol emissions. Moreover, gaseous and particulate fractions were studied separately in one of the cell exposure systems. After exposure, the cells and animals were measured for various parameters of cytotoxicity, inflammation, genotoxicity, transcriptome and proteome. Results We found that diluted (1:15) exposure pine combustion emissions (PM1 mass 7.7 ± 6.5 mg m− 3, 41 mg MJ$^{Zahl}$) contained, on average, more PM and polycyclic aromatic hydrocarbons (PAHs) than spruce (PM1 mass 4.3 ± 5.1 mg m− 3, 26 mg MJ− 1) emissions, which instead showed a higher concentration of inorganic metals in the emission aerosol. Both A549 cells and mice exposed to these emissions showed low levels of inflammation but significantly increased genotoxicity. Gaseous emission compounds produced similar genotoxicity and a higher inflammatory response than the corresponding complete combustion emission in A549 cells. Systems biology approaches supported the findings, but we detected differing responses between in vivo and in vitro experiments. Conclusions Comprehensive in vitro and in vivo exposure studies with emission characterization and systems biology approaches revealed further information on the effects of combustion aerosol toxicity than could be achieved with either method alone. Interestingly, in vitro and in vivo exposures showed the opposite order of the highest DNA damage. In vitro measurements also indicated that the gaseous fraction of emission aerosols may be more important in causing adverse toxicological effects. Combustion aerosols of different wood species result in mild but aerosol specific in vitro and in vivo effects.
45. Saccular cyst of the larynx in infants
- Author
-
Suhonen, H., primary, Kero, P.O., additional, Puhakka, H., additional, and Vilkki, P., additional
- Published
- 1984
- Full Text
- View/download PDF
46. Toward high-contrast breast CT at low radiation dose
- Author
-
Petri Sipilä, Pekka Virkkunen, Karl von Smitten, Marja-Liisa Karjalainen-Lindsberg, Alberto Bravin, Jani Keyriläinen, Pekka Suortti, Manuel Fernández, Heikki Suhonen, Stefan Fiedler, Marjut Leidenius, Department of Oncology and Radiotherapy, Turku University Central Hospital, Grenoble Institut des Neurosciences (GIN), Université Joseph Fourier - Grenoble 1 (UJF)-Institut National de la Santé et de la Recherche Médicale (INSERM), Department of Pathology, Helsinki University Central Hospital, Helsinki Medical Imaging Center, Breast surgery unit, Radiation Metrology Laboratory, Radiation and Nuclear Safety Authority, European Molecular Biology Laboratory [Hamburg] (EMBL), Department of Physical Sciences [Helsinki], University of Helsinki, Biomedical Beamline (ID17), European Synchrotron Radiation Facility (ESRF), Collaboration, Helsingin yliopisto = Helsingfors universitet = University of Helsinki, Serduc, Raphael, Keyrilainen, J, Fernandez, M, Karjalainen-Lindsberg, M, Virkkunen, P, Leidenius, M, von Smitten, K, Sipila, P, Fiedler, S, Suhonen, H, Suortti, P, and Bravin, A
- Subjects
low radiation dose ,Spectrum analyzer ,medicine.medical_specialty ,MESH: Radiation Dosage ,Radiobiology ,media_common.quotation_subject ,Radiography ,MESH: Mammography ,FIS/07 - FISICA APPLICATA (A BENI CULTURALI, AMBIENTALI, BIOLOGIA E MEDICINA) ,Radiation Dosage ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Humans ,Contrast (vision) ,Dosimetry ,Radiology, Nuclear Medicine and imaging ,media_common ,MESH: Humans ,business.industry ,Soft tissue ,breast CT ,[SDV.ETH] Life Sciences [q-bio]/Ethics ,3. Good health ,[SDV.ETH]Life Sciences [q-bio]/Ethics ,030220 oncology & carcinogenesis ,Female ,Radiology ,Tomography ,Tomography, X-Ray Computed ,Nuclear medicine ,business ,Diagnostic Mammography ,MESH: Tomography, X-Ray Computed ,MESH: Female ,Mammography - Abstract
International audience; This study was approved by the local research ethics committee, and patient informed consent was obtained. The purpose of this study was to demonstrate that high-spatial-resolution low-dose analyzer-based x-ray computed tomography (CT) can substantially improve the radiographic contrast of breast tissue in vitro when compared with that attained by using diagnostic mammography and CT. An excised human breast tumor was examined by using analyzer-based x-ray imaging with synchrotron radiation. The correspondence between analyzer-based x-ray images and diagnostic mammograms, CT images, and histopathologic findings was determined. Calcifications and fine details of soft tissue, which are at the contrast detection limit on diagnostic mammograms, are clearly visible on planar analyzer-based x-ray images. Analyzer-based x-ray CT yields high contrast from smoothly varying internal structures, such as tumorous mass lesions, corresponding to information on actual structures seen at histopathologic analysis. The mean glandular dose of 1.9 mGy in analyzer-based x-ray CT is approximately equivalent to the dose administered during single-view screening mammography. The improved visibility of mammographically indistinguishable lesions in vitro suggests that analyzer-based x-ray CT may be a valuable method in radiographic evaluation of the breast, thereby justifying further investigations.
- Published
- 2008
47. USAXS and SAXS from cancer-bearing breast tissue samples
- Author
-
Heikki Suhonen, A. Bravin, Jani Keyriläinen, Stefan Fiedler, Marjut Leidenius, Manuel Fernández, K. von Smitten, Marja-Liisa Karjalainen-Lindsberg, Pekka Suortti, Fernandez, M, Suhonen, H, Keyrilainen, J, Bravin, A, Fiedler, S, Karjalainen-Lindsberg, M, Leidenius, A, von Smitten, K, and Suortti, P
- Subjects
In situ ,Pathology ,medicine.medical_specialty ,Neutron diffraction ,FIS/07 - FISICA APPLICATA (A BENI CULTURALI, AMBIENTALI, BIOLOGIA E MEDICINA) ,02 engineering and technology ,In Vitro Techniques ,Sensitivity and Specificity ,030218 nuclear medicine & medical imaging ,law.invention ,03 medical and health sciences ,breast cancer ,0302 clinical medicine ,Nuclear magnetic resonance ,Imaging, Three-Dimensional ,law ,Scattering, Small Angle ,Medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Breast tissue ,Small-angle X-ray scattering ,Scattering ,business.industry ,Tomography, X-Ray ,Reproducibility of Results ,SAXS ,General Medicine ,Ductal carcinoma ,021001 nanoscience & nanotechnology ,Radiographic Image Enhancement ,Refractometry ,Pinhole camera ,Radiographic Image Interpretation, Computer-Assisted ,Female ,Small-angle scattering ,0210 nano-technology ,business ,USAXZ ,Algorithms ,Synchrotrons ,Mammography - Abstract
USAXS and SAXS patterns from cancer-bearing human breast tissue samples were recorded at beamline ID02 of the ESRF using a Bonse–Hart camera and a pinhole camera. The samples were classified as being ductal carcinoma, grade II, and ductal carcinoma in situ, partly invasive. The samples included areas of healthy collagen, invaded collagen, necrotic ducts with calcifications, and adipose tissue. The scattering patterns were analyzed in different ways to separate the scattering contribution and the direct beam from the observed rocking curve (RC) of the analyzer. It was found that USAXS from all tissues was weak, and the effects on the analyzer RC were observed only in the low-intensity tails of the patterns. The intrinsic RC was convolved with different model functions for the impulse response of the sample, and the best fit with experiment was obtained by the Pearson VII function. Significantly different distributions for the Pearson exponent m were obtained in benign and malignant regions of the samples. For a comparison with analyzer-based imaging (ABI) or diffraction enhanced imaging (DEI) a “long-slit” integration of the patterns was performed, and this emphasized the scattering contribution in the tails of the rocking curve. © 2008 Elsevier Ireland Ltd. All rights reserved.
- Published
- 2008
48. Refraction and scattering of X-rays in analyzer-based imaging
- Author
-
Heikki Suhonen, Jani Keyriläinen, Pekka Suortti, Manuel Fernandez, Alberto Bravin, Department of Physical Sciences [Helsinki], University of Helsinki, Grenoble Institut des Neurosciences (GIN), Université Joseph Fourier - Grenoble 1 (UJF)-Institut National de la Santé et de la Recherche Médicale (INSERM), Polytech, Université Montpellier 2 - Sciences et Techniques (UM2), MENTA, Menta, European Synchrotron Radiation Facility (ESRF), Department of Oncology and Radiotherapy, Turku University Central Hospital, Collaboration, Suhonen, H, Fernandez, M, Bravin, A, Keyriläinen, J, Suortti, P, Serduc, Raphael, Helsingin yliopisto = Helsingfors universitet = University of Helsinki, and Polytech'Montpellier
- Subjects
Paper ,Nuclear and High Energy Physics ,Voigtian function ,FIS/07 - FISICA APPLICATA (A BENI CULTURALI, AMBIENTALI, BIOLOGIA E MEDICINA) ,Second moment of area ,02 engineering and technology ,Collimated light ,030218 nuclear medicine & medical imaging ,MESH: X-Rays ,03 medical and health sciences ,0302 clinical medicine ,Optics ,Perfect crystal ,analyzer-based imaging ,Polymethyl Methacrylate ,Scattering, Radiation ,[SDV.NEU] Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC] ,MESH: Scattering, Radiation ,MESH: Polymethyl Methacrylate ,Instrumentation ,Voigt profile ,Physics ,Radiation ,Geometrical optics ,business.industry ,Scattering ,Phantoms, Imaging ,X-Rays ,Fatty Acids ,X-ray scattering ,021001 nanoscience & nanotechnology ,Refraction ,MESH: Fatty Acids ,diffraction enhanced imaging ,MESH: Phantoms, Imaging ,MESH: Paper ,[SDV.NEU]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC] ,Biological small-angle scattering ,0210 nano-technology ,business - Abstract
International audience; A new algorithm is introduced for separation of the scattered and non-scattered parts of a monochromatic and well collimated synchrotron radiation beam transmitted through a sample and analyzed by reflection from a perfect crystal in the non-dispersive setting. The observed rocking curve is described by the Voigt function, which is a convolution of Lorentzian and Gaussian functions. For the actual fitting, pseudo-Voigtians are used. The fit yields the scaled integrated intensity (the effect of absorption), the center of the rocking curve (the effect of refraction), and the intensity of the transmitted beam is divided into the scattered and non-scattered parts. The algorithm is tested using samples that exhibit various degrees of refraction and scattering. Very close fits are achieved in an angular range that is 15 times the full width at half-maximum of the intrinsic rocking curve of the analyzer. The scattering part has long tails of Lorentzian shape owing to the ;long-slit geometry' of the set-up. Quantitative images of absorption, refraction and scattering are constructed and compared with results of earlier treatments. The portion of scattering and the second moment of the observed rocking curve both increase linearly with the sample thickness and yield identical maps of the effects of scattering. The effects of refraction are calculated using the geometrical optics approximation, and a good agreement with experiment is found. The fits with reduced number of data points (minimum number is five) yield closely the same results as fits to the full data set.
- Published
- 2007
49. Multi-scale correlation of impact-induced defects in carbon fiber composites using X-ray scattering and machine learning.
- Author
-
Sexton AH, Suhonen H, Huss-Hansen MK, Demchenko H, Kjelstrup-Hansen J, Schwartzkopf M, and Knaapila M
- Abstract
Impact-induced defects in carbon fiber-reinforced polymers (CFRPs)-spanning from nanometer to macroscopic length scales-can be monitored using an aggregate of X-ray-based methods, but this is impractical in typical field conditions. We report on a low-velocity impacted CFRP, which is mapped using small- and wide-angle X-ray scattering and X-ray computed tomography, and employ machine learning for correlating material parameterizations derived from these techniques. The observed 1 μ m to 1 mm-sized defects are parameterized in terms of relative density and fiber orientation indicative of fiber failures (kink bands), and the nanometer sized defects in terms of crystal size and unit cell frustration. The 30 to 300 nm defects are parameterized by a power-law scattering decay, differentiating fractal-like behaviors. We find three spatial domains experimentally and by K-means Clustering: Domains of severe damage (with a visual dent), intact domains (without visual or measurable defects) and a transition domain (defects measurable by X-rays). How the parameters are correlated and how they overlap between the domains are discussed. All parameters are able to point to the detrimental fiber breakage in the severe damage domain, and scattering decay also in the transition domain, for example. How individual parameters determined from one experimental technique can be predicted from that of another is also described., (© 2024. The Author(s).)
- Published
- 2024
- Full Text
- View/download PDF
50. The origins of mammal growth patterns during the Jurassic mammalian radiation.
- Author
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Newham E, Corfe IJ, Brewer P, Bright JA, Fernandez V, Gostling NJ, Hoffmann S, Jäger KRK, Kague E, Lovric G, Marone F, Panciroli E, Schneider P, Schultz JA, Suhonen H, Witchell A, Gill PG, and Martin T
- Subjects
- Animals, Dental Cementum anatomy & histology, Synchrotrons, Phylogeny, Basal Metabolism, Mammals, Fossils, Biological Evolution
- Abstract
We use synchrotron x-ray tomography of annual growth increments in the dental cementum of mammaliaforms (stem and crown fossil mammals) from three faunas across the Jurassic to map the origin of patterns of mammalian growth patterns, which are intrinsically related to mammalian endothermy. Although all fossils studied exhibited slower growth rates, longer life spans, and delayed sexual maturity relative to comparably sized extant mammals, the earliest crown mammals developed significantly faster growth rates in early life that reduced at sexual maturity, compared to stem mammaliaforms. Estimation of basal metabolic rates (BMRs) suggests that some fossil crown mammals had BMRs approaching the lowest rates of extant mammals. We suggest that mammalian growth patterns first evolved during their mid-Jurassic adaptive radiation, although growth remained slower than in extant mammals.
- Published
- 2024
- Full Text
- View/download PDF
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