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Background Strong spontaneous inspiratory efforts can be difficult to control and prohibit protective mechanical ventilation. Instead of using deep sedation and neuromuscular blockade, the authors hypothesized that perineural administration of lidocaine around the phrenic nerve would reduce tidal volume (VT) and peak transpulmonary pressure in spontaneously breathing patients with acute respiratory distress syndrome. Methods An established animal model of acute respiratory distress syndrome with six female pigs was used in a proof-of-concept study. The authors then evaluated this technique in nine mechanically ventilated patients under pressure support exhibiting driving pressure greater than 15 cm H2O or VT greater than 10 ml/kg of predicted body weight. Esophageal and transpulmonary pressures, electrical activity of the diaphragm, and electrical impedance tomography were measured in pigs and patients. Ultrasound imaging and a nerve stimulator were used to identify the phrenic nerve, and perineural lidocaine was administered sequentially around the left and right phrenic nerves. Results Results are presented as median [interquartile range, 25th to 75th percentiles]. In pigs, VT decreased from 7.4 ml/kg [7.2 to 8.4] to 5.9 ml/kg [5.5 to 6.6] (P < 0.001), as did peak transpulmonary pressure (25.8 cm H2O [20.2 to 27.2] to 17.7 cm H2O [13.8 to 18.8]; P < 0.001) and driving pressure (28.7 cm H2O [20.4 to 30.8] to 19.4 cm H2O [15.2 to 22.9]; P < 0.001). Ventilation in the most dependent part decreased from 29.3% [26.4 to 29.5] to 20.1% [15.3 to 20.8] (P < 0.001). In patients, VT decreased (8.2 ml/ kg [7.9 to 11.1] to 6.0 ml/ kg [5.7 to 6.7]; P < 0.001), as did driving pressure (24.7 cm H2O [20.4 to 34.5] to 18.4 cm H2O [16.8 to 20.7]; P < 0.001). Esophageal pressure, peak transpulmonary pressure, and electrical activity of the diaphragm also decreased. Dependent ventilation only slightly decreased from 11.5% [8.5 to 12.6] to 7.9% [5.3 to 8.6] (P = 0.005). Respiratory rate did not vary. Variables recovered 1 to 12.7 h [6.7 to 13.7] after phrenic nerve block. Conclusions Phrenic nerve block is feasible, lasts around 12 h, and reduces VT and driving pressure without changing respiratory rate in patients under assisted ventilation. Editor’s Perspective What We Already Know about This Topic What This Article Tells Us That Is New

Our objectives were to determine the effects of an injectable formulation of calcitriol on mineral metabolism and immune function in postpartum Holstein cows that received an acidogenic diet prepartum to minimize hypocalcemia. In experiment 1, cows within 6 h of calving received calcitriol (0, 200, or 300 μg) to determine the dose needed to increase plasma concentrations of Ca; 300 μg was sufficient to sustain Ca for at least 3 d. In experiment 2, multiparous cows were assigned randomly to receive only vehicle (control, n = 25) or 300 μg of calcitriol (n = 25) subcutaneously within the first 6 h after calving. Blood was sampled before treatment and 12 h later, then daily until 15 d in milk (DIM), and analyzed for concentrations of ionized Ca (iCa), total Ca (tCa), total Mg (tMg), and total P (tP), metabolites, and hormones. Urine was sampled in the first 7 DIM and analyzed for concentrations of tCa, tMg, and creatinine. Neutrophil function was evaluated in the first week postpartum. Dry matter intake and production performance were evaluated for the first 36 DIM. Calcitriol administration increased concentrations of calcitriol in plasma within 12 h of application from 51 to 427 pg/mL, which returned to baseline within 5 d. Concentrations of iCa and tCa increased 24 h after treatment with calcitriol. Concentrations of iCa (control = 1.08 vs. calcitriol = 1.20 mM), tCa (control = 2.23 vs. calcitriol = 2.33 mM), and tP (control = 1.47 vs. calcitriol = 1.81 mM) remained elevated in cows treated with calcitriol until 3, 5, and 7 DIM, respectively, whereas concentration of tMg (control = 0.76 vs. calcitriol = 0.67 mM) was less in calcitriol cows than control cows until 3 DIM. Concentrations of parathyroid hormone decreased in calcitriol cows compared with control cows (control = 441 vs. calcitriol = 336 pg/mL). Calcitriol tended to increase plasma concentrations of β-hydroxybutyrate and serotonin, but concentrations of glucose, nonesterified fatty acids, and C-telopeptide of type I collagen in plasma did not differ between treatments. Cows treated with calcitriol excreted more urinary tCa (control = 0.5 vs. calcitriol = 2.1 g/d) and tMg (control = 4.5 vs. calcitriol = 5.0 g/d) in the first 7 and 2 DIM, respectively, than control cows. Compared with control, calcitriol improved the proportion of neutrophils with oxidative burst (control = 31.9 vs. calcitriol = 40.6%), mean fluorescence intensity for oxidative burst (control = 90,900 vs. calcitriol = 99,746), and mean fluorescence intensity for phagocytosis (control = 23,887 vs. calcitriol = 28,080). Dry matter intake, yields of milk, and milk components did not differ between treatments. Administration of 300 μg of calcitriol at calving was safe and effective in increasing blood concentration of iCa and plasma concentrations of calcitriol, tCa, and tP for the first 6 d after treatment, and improved measures of innate immune function in early-lactation Holstein cows.

The objectives were to determine the effects of supplementing docosahexaenoic acid (DHA)-rich algae on reproduction of dairy cows. Holstein cows were assigned randomly to either a control (n = 373) or the same diet supplemented daily with 100 g/cow of an algae product containing 10% DHA (algae,n = 366) from 27 to 147 days postpartum. Measurements included yields of milk and milk components, fatty acids (FA) profiles in milk fat and plasma phospholipids, resumption of ovulation by 57 days postpartum, pregnancy per artificial insemination (AI) and expression of interferon-stimulated genes in leukocytes. Feeding algae increased resumption of estrous cyclicity (77.6 vs 65.9%) and pregnancy at first AI (47.6 vs 32.8%) in primiparous cows. Algae increased pregnancy per AI in all AI in both primiparous and multiparous cows (41.6 vs 30.7%), which reduced days to pregnancy by 22 days (102 vs 124 days) compared with control cows. Pregnant cows fed algae had greater expression ofRTP4in blood leukocytes compared with those in pregnant control cows. Feeding algae increased the incorporation of DHA, eicosapentaenoic acid, conjugated linoleic acid isomerscis-9trans-11,trans-10cis-12 and total n-3 FA in phospholipids in plasma and milk fat. Yields of milk and true protein increased by 1.1 kg/day and 30 g/day respectively, whereas fat yield decreased 40 g/day in algae compared with that in control. Supplementing DHA-rich algae altered the FA composition of lipid fractions and improved reproduction in dairy cows. The benefits on reproduction might be mediated by enhanced embryo development based on changes in interferon-stimulated gene expression.

The objective of this study was to investigate the relationship among functional traits (age at first calving (AFC), calving interval (CI), reproductive efficiency (RE), total milk yield (TMY), and lactation period (LP)) in Red Sindhi breed through multivariate techniques. For this goal, performance data provided by the Brazilian Association of Zebu Breeders related to 560 Red Sindhi dairy cattle from 28 different herds in Brazil, born in the period from 1987 to 2011, were used. Principal component analysis with correlation matrix was used to find the relationship among AFC, CI, RE, TMY, and LP. It was found that for all functional traits, first 3 principal components explained more than 90% of the total variation. Clustering analysis was performed based on Tocher method, and results showed physiological relationships among functional traits. By cluster analysis, twelve different groups were generated from the pool of Sindhi herds analyzed, with a great homogeneity among females for the traits evaluated and only few females generating separate groups. Four hundred and twenty-nine females were clustered in one group, representing 76.60% of the genotypes. Total milk yield (TMY) showed 71.92% of the total variation, and age at first calving (AFC) contributed with 23.06% of the variation, being the two most important traits for the variability of the data set. In conclusion, the multivariate procedures were effective in generating the correlations among the functional traits, showing that CI is correlated with RE and all these functional traits are related with total milk yield. Electronic supplementary material The online version of this article (10.1007/s11250-019-02009-7) contains supplementary material, which is available to authorized users.

The objectives of this study were to determine the effects of supplemental progesterone on fertility responses of lactating dairy cows with a CL at the initiation of the timed artificial insemination (AI) program. Holstein cows were subjected to the Ovsynch protocol (Day -10 GnRH, Day -3 PGF2α, Day -0.7 GnRH, and Day 0 timed AI). Ovaries were scanned by ultrasonography on Day -10 and cows with CL were blocked by pen and assigned randomly to receive no supplemental progesterone (control, n = 863) or to receive a controlled internal drug-release (CIDR) insert containing progesterone from Days -10 to -3 (1CIDR, n = 862). Cows were observed for signs of estrus beginning on Day -9 based on removal of tail chalk and those in estrus received AI on the same day. Blood sampled from a subset of cows was analyzed for progesterone concentrations on Days -10, -9, -7, -5, -3, 0, 6, 13, and 19. Pregnancy was diagnosed on Days 32 and 60 after AI. Supplementation increased (P < 0.01) progesterone concentrations between Day -9 and -3 compared with control (7.5 vs. 6.2 ng/mL). Treatment had no effect on the ovulatory response to the first and final GnRH injections of the Ovsynch protocol, the proportion of cows that maintained their CL until the day of PGF2α injection, or the diameter of the ovulatory follicle before AI. Although the overall proportion of cows in estrus at AI did not differ between treatments, progesterone supplementation prevented (P < 0.01) cows from coming into estrus from Days -9 to -3 (0.0% vs. 4.7%), whereas it increased (P = 0.02) the proportion of cows inseminated in estrus from Days -2 to -1 (7.1% vs. 4.5%). Pregnancy per AI (P/AI) tended to be reduced (P = 0.06) by supplemental progesterone on Day 32 (40.5% vs. 45.0%), but not on Day 60 after AI (36.6% vs. 39.7%). A tendency for an interaction (P = 0.09) between treatment and the presence of CL at the PGF2α injection was observed for P/AI on Day 32 in cows that received timed AI because progesterone supplementation reduced P/AI in cows that maintained their CL until Day -3 (40.3% vs. 46.7%); however, it increased P/AI in those that did not have a CL at PGF2α (38.1% vs. 27.7%). Treatment did not affect pregnancy loss between Days 32 and 60 of gestation. In conclusion, incorporating a single intravaginal insert to the timed AI program increased progesterone concentrations in plasma by 1.3 ng/mL, but did not benefit fertility in dairy cows that have CL at the initiation of the synchronization protocol.

This review focuses on the paracrine and endocrine actions of interferon tau (IFNT) during pregnancy recognition and establishment in ruminants. Pregnancy recognition involves the suppression of the endometrial luteolytic mechanism by the conceptus to maintain progesterone production by the corpus luteum (CL). The paracrine antiluteolytic effects of conceptus-derived IFNT inhibit upregulation of oxytocin receptors in the endometrial epithelia of the uterus, thereby preventing the production of luteolytic prostaglandin F2 alpha (PGF2α) pulses. In the endometrium, IFNT induces or upregulates a large number of classical IFN-stimulated genes (ISGs) and regulates expression of many other genes in a cell-specific manner that are likely important for conceptus elongation, implantation and establishment of pregnancy. Further, IFNT has endocrine effects on extrauterine cells and tissues. In sheep, IFNT induces luteal resistance to PGF2α, thereby ensuring survival of the CL for maintenance of pregnancy. The ISGs induced in circulating peripheral blood mononuclear cells by IFNT may also be useful as an indicator of pregnancy status in cattle. An increased knowledge of IFNT and ISGs is important to improve the reproductive efficiency in ruminants.

The aim of this study was to compare the reproductive performance of dairy cows subjected to early (ER) or late (LR) resynchronization programs after nonpregnancy diagnoses based on either pregnancy-associated glycoproteins (PAG) ELISA or transrectal palpation, respectively. In addition, the accuracy of the PAG ELISA for early pregnancy diagnosis was assessed. Lactating Holstein cows were subjected to a PresynchOvsynch protocol with timed artificial insemination (AI) performed between 61 and 74 DIM. On the day of the first postpartum AI, 1,093 cows were blocked by parity and assigned randomly to treatments; however, because of attrition, 452 ER and 520 LR cows were considered for the statistical analyses. After the first postpartum AI, cows were observed daily for signs of estrus and inseminated on the same day of detected estrus. Cows from ER that were not reinseminated in estrus received the first GnRH injection of the Ovsynch protocol for resynchronization 2 d before pregnancy diagnosis. On d 28 after the previous AI (d 27 to 34), pregnancy status was determined by PAG ELISA, and nonpregnant cows continued on the Ovsynch protocol for reinsemination. Pregnant cows had pregnancy status reconfirmed on d 46 after AI (d 35 to 52) by transrectal palpation, and those that lost the pregnancies were resynchronized. Cows assigned to LR had pregnancy diagnosed by transrectal palpation on d 46 after AI (d 35 to 52) and nonpregnant cows were resynchronized with the Ovsynch protocol. Blood was sampled on d 28 after AI (d 27 to 34) from cows in both treatments that had not been reinseminated on estrus and again on d 46 after AI (d 35 to 52) for assessment of PAG ELISA to determine the accuracy of the test. Cows were subjected to treatments for 72 d after the first insemination. Pregnancy per AI (P/AI) at first postpartum timed AI did not differ between treatments and averaged 28.9%. The proportion of nonpregnant cows that were resynchronized and received timed AI was greater for ER than for LR (30.0 vs. 7.6%). Cows in ER had a shorter interval between inseminations when inseminated following spontaneous estrus (21.7 ± 1.1 vs. 27.8 ± 0.8 d) or after timed AI (35.3 ± 1.2 vs. 55.2 ± 1.4 d). Nevertheless, the ER did not affect the rate of pregnancy (adjusted hazard ratio = 1.23; 95% confidence interval = 0.94 to 1.61) or the median days postpartum to pregnancy (ER = 132 vs. LR = 140). A total of 2,129 PAG ELISA were evaluated. Overall, sensitivity, specificity, and positive and negative predictive values averaged 95.1, 89.0, 90.1, and 94.5%, respectively, and the accuracy was 92.1%. In conclusion, PAG ELISA for early diagnosis of pregnancy had acceptable accuracy, but early resynchronization after nonpregnancy diagnosis with PAG ELISA did not improve the rate of pregnancy or reduce days open in dairy cows continuously observed for estrus.

O objetivo do presente estudo foi comparar o desempenho da ovulacao multipla (SOV) seguida da fertilizacao in vivo em vacas adultas puras da raca Gir Leiteiro (Bos taurus indicus), em duas diferentes condicoes climaticas da regiao Sudeste do Brasil. As SOV, realizadas entre os anos de 1997 e 2010, foram agrupadas nos meses de novembro, dezembro, janeiro e fevereiro (caracterizados como verao) e nos meses de maio, junho, julho e agosto (caracterizados como inverno). As informacoes avaliadas neste estudo consistiram de resultados de 180 sessoes de SOV realizadas em 71 doadoras. Foram submetidas a fertilizacao in vivo com semen convencional de 34 touros puros da mesma raca e fertilidade conhecida. Foi recuperado o total de 1406 estruturas e foram produzidos 797 embrioes viaveis que se destinavam a inovulacoes em rebanhos comerciais. As medias das respostas obtidas por cada sessao de SOV no inverno e verao foram respectivamente: totais de estruturas recuperadas (8,5 vs 7,3), embrioes viaveis (4,8 vs 4,0), embrioes degenerados (2,1 vs 2,5) e estruturas nao fecundadas (1,5 vs 0,7); apenas esta ultima resposta apresentou diferenca significativa (p

In this paper, we discuss the porting strategy and the achieved performance of Petrobras production code that implements Kirchhoff prestack time and depth seismic migration algorithms on a cluster of 64 GPUs and 256 CPU cores. The time migration of a real-world survey was 20 times faster in the full cluster with GPUs than in the full cluster without GPUs. The introduction of GPUs accelerated the depth migration of another real-world survey by a factor of 5. In both cases, a large fraction of the achieved gains were due to the porting strategy that privileges CPU-GPU cooperation instead of pure GPU speed. Another strategy that contributed to the high gains was GPU overloading by multiple MPI processes. To cope with the heterogeneous load of real-world data, we developed a dynamic load balancing scheme that significantly speeds up computation.

Two experiments were conducted to characterize blood concentrations of minerals and acid-base status after oral dosing of Ca salts and to determine the effects of oral Ca on mineral and metabolic status and incidence diseases. The hypotheses were that administration of oral Ca as CaCl2 and CaSO4 maintains blood total Ca (tCa) concentrations ≥2.125 mM and reduces the incidence of diseases in early lactation. In experiment 1, 18 Holstein cows on the day of calving were assigned to receive a single dose of 0, 43, or 86g of Ca as an oral bolus. Blood was sampled before and after treatments to characterize acid-base status and concentrations of minerals. In experiment 2, 450 Holstein cows considered of low (LRM; normal calving) or high risk (HRM; dystocia, twins, stillbirth, retained placenta, vulvo-vaginal laceration, or a combination of these) of metritis (primiparous-LRM=84; primiparous-HRM=84; multiparous-LRM=138; multiparous-HRM=138) on the day of calving were blocked by parity and then randomly assigned to control, no Ca supplementation; 86g of Ca on d 0 and 1 postpartum (CaS1); or 86g of Ca on d 0 and 1 postpartum followed by 43g/d on d 2 to 4 postpartum (CaS4). Blood was sampled before and 30 min after treatment on d 0, and 30 min after treatments on d 1 to 4, and d 7 and 10 for determination of concentrations of minerals and metabolites and blood acid-base responses. Disease incidence was evaluated for the first 30 DIM. Concentrations of ionized Ca (iCa) increased for 2h in cows supplemented with 43g of Ca and fewer than 8h in cows supplemented with 86g of Ca. The changes in iCa concentrations from pretreatment to 30 min after 86g of Ca supplemented on d 0 were 0.11±0.03 mM in multiparous cows and 0.25±0.03 mM in primiparous cows. Oral Ca reduced the incidence of subclinical hypocalcemia (SCH; tCa

Objectives were to create a model to induce subclinical hypocalcemia (SCH) (blood ionized calcium [Ca2+] < 1.0 mM), and to study the effects of induced SCH on clinical parameters and function of innate and adaptive immune cells in dairy cows., American Association of Bovine Practitioners Proceedings of the Annual Conference, 2013

We discuss the performance of Petrobras production Kirchhoff prestack seismic migration on a cluster of 72 GPUs and 288 CPU cores with CPU and GPU cooperation. Porting and optimization of the application hot spot (contribution loop) to a single GPU reduces total execution time by a factor of 20 per node. Instead of porting the next hot spot (trace filtering) to the GPU, we also show that cooperation of CPU (trace filtering) and GPU (contribution loop) is optimal, since the CPU workload is totally overlapped by GPU workload.

We discuss the performance of Petrobras production Kirchhoff prestack seismic migration on a cluster of 64 GPUs and 256 CPU cores. Porting and optimization of the application hot spot (98.2% of a single CPU core execution time) to a single GPU reduces total execution time by a factor of 36 on a control run. We then argue against the usual practice of porting the next hot spot (1.5% of single CPU core execution time) to the GPU. Instead, we show that cooperation of CPU and GPU reduces total execution time by a factor of 59 on the same control run. Remaining GPU idle cycles are eliminated by overloading the GPU with multiple requests originated from distinct CPU cores. However, increasing the number of CPU cores in the computation reduces the gain due to the combination of enhanced parallelism in the runs without GPUs and GPU saturation on runs with GPUs. We proceed by obtaining close to perfect speed-up on the full cluster over homogeneous load obtained by replicating control run data. To cope with the heterogeneous load of real world data we show a dynamic load balancing scheme that reduces total execution time by a factor of 20 on runs that use all GPUs and half of the cluster CPU cores with respect to runs that use all CPU cores but no GPU.

This paper describes performance results obtained by porting production seismic imaging software to a set of novel processor architectures, with particular emphasis on a cluster of GPUs. Introduction Seismic processing algorithms are constantly evolving, in close connection with innovations in seismic data acquisition technology. In addition to that, an oil company has to adequate its proprietary algorithms to easily interrelate with a small set of commercial processing packages. In order to cope with this dynamic environment, production codes for seismic imaging developed at Tecnologia Geofisica of Petrobras are designed to accommodate multipurpose algorithms under a software structure that emphasizes portability and modularity. But the lifetime of a software design may be limited by the lifetime of the computer architecture it was designed for. New trends in processor architecture (multi-core and many-core) and the ever-increasing number of processors on a cluster may trigger software redesign. The flexibility of Petrobras seismic imaging software makes it a natural candidate to test the adequacy of a set of different algorithms and a previously designed software structure to the recently arrived computer architectures, since testing demands a limited amount of change in the actual production code. This paper describes the structure of seismic imaging software developed at Petrobras, its use in daily production runs and the porting and achieved speed of one algorithm – the Kirchhoff time migration – to novel computer architectures, including a cluster of GPUs.

We describe the computational characteristics of the Kirchhoff prestack seismic migration currently used in daily production runs at Petrobras and its port to novel architectures. Fully developed in house, this portable and fault tolerant application has high sequential and parallel efficiency, with parallel scalability tested up to 8192 processors on the IBM Blue Gene without exhausting parallelism. Production load comprises thousands of jobs per year, consuming the installed park of a few thousand x86 CPU cores, with top production runs continuously using up to 1000 dedicated processors during 20 days. A built in mechanism automatically produces, collects and stores job performance data, allowing single job performance analysis and multi job performance statistics. Its port to quad-core x86 and Sony PlayStation 3 achieved very high price/performance and performance/watt gains over single core x86 machines. Port to the PS3 is described in detail. Experimental performance data on a modest PS3 cluster is also presented.

We describe a method to perform two-pass 3-D Kirchho prestack time migration whose com- putation time is nearly the square-root of that required for the one-pass algorithm. To better understand the conditions and restrictions associated with the application of the method we discuss the kinematical approximations involved in its derivation. A real data example shows that this approach can be applied with success in areas with moderate structural complexity.

Physiological and behavioral differences between Bos taurus and Bos indicus can influence the response to a fixed AI protocol. The objective of this study was to examine the reduction of the usual dose of 2 mg of estradiol benzoate (EB) to 1 mg at the beginning of a fixed-time AI protocol, aiming at follicular regression. In a second step, we evaluated the effect of EB on follicle development during follicular pre-deviation and dominance. The experiment was performed at Monte Verde Farm (Uberaba, MG, Brazil). Twenty-two cows (n = 10 heifers and n = 12 nonlactating cows) underwent an estrous synchronization protocol with a progesterone-releasing intravaginal device (P4; Sincrogest®, Ouro Fino Animal Health, São Paulo, Brazil) and received 1 (G1mg, n = 11) or 2 mg (G2mg, n = 11) of EB (Sincrodiol®, Ouro Fino Animal Health), on a random day (designated Day 0). Follicular dynamics was monitored once per day by ultrasonography from Day 0 to 4 with blood sample collections. In a second step, females received 2 mg of EB on Day 3 (GD3, pre-deviation, n = 4) or Day 5 (GD5, dominance, n = 4) of the estrous cycle (Day 0 was the ovulation). Following these treatments, follicular development was monitored daily for 6 days with blood sample collections. The statistical analysis was conducted using the SAS System for Windows 2 (2003; SAS Institute Inc., Cary, NC, USA). The explanatory variables included in the statistical model were the dose of EB, animal category (cows and heifers), and their interaction. The mean test was used to compare intervals from EB treatment to follicular atresia and follicular wave emergence using ANOVA. Progesterone concentrations between groups were compared using the Wilcoxon test. Independently of animal category or stage of the estrous cycle, both EB doses (1 or 2 mg) induced follicular atresia in 2.2 ± 0.9 and 2.1 ± 1.2 days (P > 0.05), respectively. Emergence of a new follicular wave was observed, from Day 0 to 4, in 64% (7/11) of females from G1mg and in 45% (5/11) from G2mg, and the interval between treatment and follicular emergence was 3.4 ± 0.8 and 3.0 ± 1.0 days (P > 0.05), respectively. Plasma progesterone concentrations of the 22 animals increased from 2.1 ± 2.0 ng mL–1 to 7.6 ± 3.0 ng mL–1 by 24 h after the device insertion (P

Este trabalho visa avaliar a viabilidade do uso de paralelismo no processamento sísmico. Para isto foi escolhida uma aplicação representativa (migração sísmica), resolvida por um algoritmo comumente empregado em produção (migração w-x). Sua implementação foi experimentada em cinco máquinas paralelas com três arquiteturas distintas. Os resultados experimentais foram constantemente bons e coerentes com trabalhos correlatos recentes, o que nos leva a concluir pela viabilidade do uso do paralelismo no processamento sísmico.