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Cave heritage is often threatened by tourism or even scientific activities, which can lead to irreversible deterioration. We present a preventive conservation monitoring protocol to protect caves with rock art, focusing on La Garma Cave (Spain), a World Heritage Site with valuable archaeological materials and Palaeolithic paintings. This study assessed the suitability of the cave for tourist use through continuous microclimate and airborne particles monitoring, biofilm analysis, aerobiological monitoring and experimental visits. Our findings indicate several factors that make it inadvisable to adapt the cave for tourist use. Human presence and transit within the cave cause cumulative effects on the temperature of environmentally very stable and fragile sectors and significant resuspension of particles from the cave sediments. These environmental perturbations represent severe impacts as they affect the natural aerodynamic control of airborne particles and determine bacterial dispersal throughout the cave. This monitoring protocol provides part of the evidence to design strategies for sustainable cave management.

Castañar is a cave with strict visitor control measures since it was open to public visits in 2003. However, in recent years, the cave suffered two fungal outbreaks, the first in 2008 and controlled by cleaning the contaminated sediments and subsequent closure of the cave until 2014. The cave was reopened but limited to a maximum of 450 visitors/year. Despite these restrictions on visit, the cave experienced a second outbreak in 2021, originating from the installation of a steel grating walkway, aiming at protecting the ground sediments from the visitors’ footsteps. Here, we conducted an analysis using Next-Generation Sequencing and culture-dependent techniques to investigate the fungal communities related to the second outbreak and compare with those present before the cave suffered the outbreak. The results show that the most abundant fungi involved in the 2021 outbreak were already detected in 2020, and even in 2008 and 2009, although the main species that originating both outbreaks were different, likely due to the different carbon sources introduced into the cave.

The Gypsum Karst of Sorbas, Almeria, southeast Spain, includes a few caves whose entrances are open and allow the entry and roosting of numerous bats. Caves are characterized by their diversity of gypsum speleothems, such as stalactites, coralloids, gypsum crusts, etc. Colored biofilms can be observed on the walls of most caves, among which the Covadura and C3 caves were studied. The objective was to determine the influence that bat mycobiomes may have on the fungal communities of biofilms. The results indicate that the fungi retrieved from white and yellow biofilms in Covadura Cave (Ascomycota, Mortierellomycota, Basidiomycota) showed a wide diversity, depending on their location, and were highly influenced by the bat population, the guano and the arthropods that thrive in the guano, while C3 Cave was more strongly influenced by soil- and arthropod-related fungi (Ascomycota, Mortierellomycota), due to the absence of roosting bats.

A flood event affecting Pindal Cave, a UNESCO World Heritage site, introduced a substantial amount of external sediments and waste into the cave. This event led to the burial of preexisting sediments, altering the biogeochemical characteristics of the cave ecosystem by introducing heightened levels of organic matter, nitrogen compounds, phosphorus, and heavy metals. The sediments included particulate matter and waste from a cattle farm located within the water catchment area of the cavity, along with diverse microorganisms, reshaping the cave microbial community. This study addresses the ongoing influence of a cattle farm on the cave ecosystem and aims to understand the adaptive responses of the underground microbial community to the sudden influx of waste allochthonous material. Here, we show that the flood event had an immediate and profound effect on the cave microbial community, marked by a significant increase in methanogenic archaea, denitrifying bacteria, and other microorganisms commonly associated with mammalian intestinal tracts. Furthermore, our findings reveal that one year after the flood, microorganisms related to the flood decreased, while the increase in inorganic forms of ammonium and nitrate suggests potential nitrification, aligning with increased abundances of corresponding functional genes involved in nitrogen cycling. The results reveal that the impact of pollution was neither recent nor isolated, and it was decisive in stopping livestock activity near the cave. The influence of the cattle farm has persisted since its establishment over the impluvium area, and this influence endures even a year after the flood. Our study emphasizes the dynamic interplay between natural events, anthropogenic activities, and microbial communities, offering insights into the resilience of cave ecosystems. Understanding microbial adaptation in response to environmental disturbances, as demonstrated in this cave ecosystem, has implications for broader ecological stu

A data-driven approach insensitive to the initial conditions was developed to extract governing equations for the concentration of CO2 in the Altamira cave (Spain) and its two main drivers: the outside temperature and the soil moisture. This model was then reformulated in order to use satellite observations and meteorological predictions, as a forcing. The concentration of CO2 inside the cave was then investigated from 1950 to 2100 under various scenarios. It is found that extreme levels of CO2 were reached during the period 1950–1972 due to the massive affluence of visitors. It is demonstrated that it is possible to monitor the CO2 in the cave in real time using satellite information as an external forcing. For the future, it is shown that the maximum values of CO2 will exceed the levels reached during the 1980s and the 1990s when the CO2 introduced by the touristic visits, although intentionally reduced, still enhanced considerably the micro corrosion of walls and pigments.

In the absence of sunlight, caves harbor a great diversity of microbial colonies to extensive biofilms with different sizes and colors visible to the naked eye. One of the most widespread and visible types of biofilm are those with yellow hues that can constitute a serious problem for the conservation of cultural heritage in many caves, such as Pindal Cave (Asturias, Spain). This cave, declared a World Heritage Site by UNESCO for its Paleolithic parietal art, shows a high degree of development of yellow biofilms that represents a real threat to the conservation of painted and engraved figures. This study aims to: 1) identify the microbial structures and the most characteristic taxa composing the yellow biofilms, 2) seek the linked microbiome reservoir primarily contributing to their growth; 3) seed light on the driving vectors that contribute to their formation and determine the subsequent proliferation and spatial distribution. To achieve this goal, we used amplicon-based massive sequencing, in combination with other techniques such as microscopy, in situ hybridization and environmental monitoring, to compare the microbial communities of yellow biofilms with those of drip waters, cave sediments and exterior soil. The results revealed microbial structures related to the phylum Actinomycetota and the most characteristic bacteria in yellow biofilms, represented by the genera wb1-P19, Crossiella, Nitrospira, and Arenimonas. Our findings suggest that sediments serve as potential reservoirs and colonization sites for these bacteria that can develop into biofilms under favorable environmental and substrate conditions, with a particular affinity for speleothems and rugged-surfaced rocks found in condensation-prone areas. This study presents an exhaustive study of microbial communities of yellow biofilms in a cave, which could be used as a procedure for the identification of similar biofilms in other caves and to design effective conservation strategies in caves with valuab

Castañar Cave (Caceres, Spain) is a unique show cave known for its high natural radiation levels. This study presents a comprehensive analysis of its prokaryotic diversity, specifically focusing on investigating the influence of environmental conditions and substrate characteristics on the prokaryotic community structure in the cave sediments. Additionally, the research aims to evaluate the potential impact of human activities on the cave ecosystem. The identification of distinct bioclimatic zones within the cave was made possible through a combination of environmental and microbial monitoring (ATP assays). The results reveal sediment texture as a significant factor, notably affecting the structure, diversity, and phylogenetic variability of the microbial community, including both Bacteria and Archaea. The proportion of clay minerals in sediments plays a crucial role in regulating moisture levels and nutrient availability. These substrate properties collectively exert a significant selective pressure on the structure of prokaryotic communities within cave sediments. The molecular approach shows that heterotrophic bacteria, including those with chitinolytic enzymes, primarily inhabit the cave. Furthermore, chemoautotrophic nitrifiers such as the archaea Nitrososphaeria and the genus Nitrospira, as well as methanotrophic bacteria from the phyla Methylomirabilota, Pseudomonadota, and Verrucomicrobiota, are also present. Remarkably, despite being a show cave, the cave microbiota displays minimal impacts from human activities and the surface ecosystem. Prokaryotic populations exhibit stability in the innermost areas, while the tourist trail area experiences slightly higher biomass increases due to visitor traffic. This suggests that conservation efforts have successfully limited the entry of external nutrients into the innermost cave areas. Additionally, the results suggest that integrating biomarkers like ATP into environmental monitoring can significantly enhance the m

European caves contain some of the world’s greatest Paleolithic paintings, and their conservation is at risk due to the use of artificial lighting. Both lighting and high CO2 promotes the growth of phototrophic organisms on walls, speleothems and ground sediments. In addition, the combined effect of increases in CO2, vapor concentration and temperature variations induced by visitors can directly affect the development of corrosion processes on the cave rock surfaces. An early detection of the occurrence of phototrophic biofilms on Paleolithic paintings is of the utmost importance, as well as knowing the microorganisms involved in the colonization of rocks and walls. Knowledge of the colonizing species and their ecology will allow the adoption of control measures. However, this is not always possible due to the limited amount of biomass available for molecular analyses. Here, we present an alternative approach to study faint green biofilms of Chlorophyta in the initial stage of colonization on the Polychrome Panel in El Castillo Cave, Cantabria, Spain. The study of the biofilms collected on the rock art panel and in the ground sediments revealed that the lighting of the cave promoted the development of the green algae Jenufa and Coccomyxa, as well as of complex prokaryotic and eukaryotic communities, including amoebae, their endoparasites and associated bacteria and fungi. The enrichment method used is proposed as a tool to overcome technical constraints in characterizing biofilms in the early stages, allowing a preliminary characterization before deciding for direct or indirect interventions in the cave.

Castañar Cave is a clear example of an oligotrophic ecosystem with high hygrothermal stability both seasonal and interannual and the particularity of registering extraordinary levels of environmental radiation. These environmental conditions make the cave an ideal laboratory to evaluate both the responses of the subterranean environment to sudden changes in the matter and energy fluxes with the exterior and also any impact derived from its use as a tourist resource under a very restrictive access regime. In 2008, a fungal outbreak provoked by a vomit contaminated the sediments which were removed and subsequently treated with hydrogen peroxide. Fungal surveys were carried out in 2008 and 2009. The visits were resumed in 2014. Here, 12 years after the outbreak, we present an exhaustive study on the cave sediments in order to know the distribution of the different fungal taxa, as well as the prevalence and spatio-temporal evolution of the fungi caused by the vomit over the years under the conditions of relative isolation and high radiation that characterize this cave.

La Cueva del Pindal (Ribadedeva, Asturias) y su arte rupestre paleolítico forman parte de la Lista del Patrimonio Mundial de la UNESCO desde 2008. Actualmente está abierta al público con visitas limitadas y en ella se desarrolla un proyecto de investigación sobre actividad microbiana en ecosistemas naturales subterráneos y su aplicación al diseño de estrategias de conservación. El sistema kárstico del Pindal se desarrolla en un macizo calcáreo modelado en forma de terrazas marinas (rasas), situadas entre 30 y 68 metros s.n.m que constituyen el área de captación hídrica preferente y en las que se observan numerosas estructuras exokársticas tipo dolina y poljé. Sobre una de las dolinas, situada casi en la vertical de la cavidad, se instaló una explotación ganadera en 1995. El 23 de octubre de 2019 tras un episodio extremo de precipitaciones (209 l/m2) se produjo una fuerte acumulación de agua en la dolina y una entrada masiva de agua y sedimentos en la cueva. El 31 de octubre se realizó un muestreo específico para conocer los cambios provocados en el ecosistema subterráneo. La inundación provocó un fuerte incremento de materia orgánica, nitrógeno, fósforo y potasio disponibles en los sedimentos y modificaciones muy significativas en la composición de las comunidades microbianas presentes en los sedimentos: aparición de nuevos filos bacterianos (Firmicutes y Bacteroidetes), incluyendo grupos de bacterias patógenas oportunistas (Corynebacterium, Thauera, Clostridiales) y la casi total desaparición de otros (Rokubacteria y Nitrospirae). Los resultados confirman que el agua y sedimentos arrastrados al interior de la cueva en la inundación fueron acompañados de residuos procedentes de la explotación ganadera, demostrando el alto grado de vulnerabilidad de este tipo de ambientes. Tras el estudio e informe correspondiente, la actividad ganadera cesó en 2021 y continúa el estudio de las poblaciones microbianas para conocer su evolución a medio-largo plazo.

El patrimonio natural y cultural de las cuevas se ve a menudo amenazado por el turismo y por otras actividades de carácter científico que las expone a riesgos que pueden provocar la alteración irreversible de sus condiciones ambientales de carácter irreversible. Las cuevas con arte rupestre y yacimientos arqueológicos suponen un caso especial y complejo. Cualquier modificación en sus condiciones climáticas conlleva un cambio en el ecosistema subterráneo que, a menudo, favorece el desarrollo y proliferación de poblaciones microbianas que llegan a colonizar los diferentes sustratos presentes en la cueva. La cueva de La Garma constituye un ejemplo destacado de cavidad con una larga frecuentación humana desde el Paleolítico antiguo hasta la Edad Media. Desde su descubrimiento en noviembre de 1995, la cueva sólo es accesible para la investigación arqueológica y la monitorización de sus condiciones ambientales. En este trabajo se presentan los resultados del estudio detallado de sus condiciones microclimáticas, y su influencia en la dispersión de microorganismos en el aire subterráneo y en el desarrollo de biofilms sobre la superficie de las rocas y los sedimentos. La dispersión bacteriana en el aire de la cueva está directamente influenciada por la circulación del aire, con fuertes incrementos durante los pulsos de ventilación vinculados a los vientos de componente sur en el exterior. Las conclusiones del estudio desaconsejan la adecuación de la cueva para su uso turístico y el control exhaustivo de cualquier trabajo arqueológico que implique perforaciones, zanjas o movimientos de tierras- sedimentos, ya que se favorecería la proliferación inmediata de colonias microbianas y con ello el desarrollo de procesos irreversibles de biodeterioro.

Cave heritage is often threatened by tourism or even scientific activities, which can lead to irreversible deterioration. We present a preventive conservation monitoring protocol to protect caves with rock art, focusing on La Garma Cave (Spain), a World Heritage Site with valuable archaeological materials and Palaeolithic paintings. This study assessed the suitability of the cave for tourist use through continuous microclimate and airborne particles monitoring, biofilm analysis, aerobiological monitoring and experimental visits. Our findings indicate several factors that make it inadvisable to adapt the cave for tourist use. Human presence and transit within the cave cause cumulative effects on the temperature of environmentally very stable and fragile sectors and significant resuspension of particles from the cave sediments. These environmental perturbations represent severe impacts as they affect the natural aerodynamic control of airborne particles and determine bacterial dispersal throughout the cave. This monitoring protocol provides part of the evidence to design strategies for sustainable cave management.

Along the northern littoral of the Iberian Peninsula, from Cuerres (Asturias) to Oyambre (Cantabria) there are caves, such as El Pindal (World Heritage List). Two geomorphologic maps have been prepared: a general scaled 1:25000, and a detail one of the cave, with erosional and depositional landforms geomorphologic units. A relative Quaternary chronology for the depositional landforms, uses colour spots. Marine morphologies suitable for determining past sea-level positions were surveyed to identify the elevation of past high-stands and reconstructing paleo-shorelines. As a result, the study of seven erosional surfaces (rasas) in quartzites and six on limestones led to reconstructing a general sequence between 275–120 m and 90–1 m above sea level (a.s.l.) respectively. Around the El Pindal cave there are four rasas cut on quartzites (171–160 m) and four cut on limestone (65–32 m). Other additional indicators of paleoshorelines are: 24–25 m entrance to the El Pindal cave, 20–21 m lower Pindal, 15–17 m marine terrace, 9–10 m shelter, 2–3 m notches and 0–1 m present rasa.Considering the elevation rates for the various rasas, an estimated value of 0.066 mm/y as the most probable, it is concluded that the beginning of Quaternary lays at 172 m a.s.l., MCIN/AEI/10.13039/501100011033, Depto. de Geodinámica, Estratigrafía y Paleontología, Fac. de Ciencias Geológicas, TRUE, pub

The genus Crossiella contains two species, C. equi, causing nocardioform placentitis in horses, and C. cryophila, an environmental bacterium. Apart from C. equi, which is not discussed here, environmental Crossiella is rarely reported in the literature; thus, it has not been included among “rare actinobacteria”, whose isolation frequency is very low. After C. cryophila, only five reports cover the isolation of Crossiella strains. However, the frequency of published papers on environmental Crossiella has increased significantly in recent years due to the extensive use of next-generation sequencing (NGS) and a huge cascade of data that has improved our understanding of how bacteria occur in the environment. In the last five years, Crossiella has been found in different environments (caves, soils, plant rhizospheres, building stones, etc.). The high abundance of Crossiella in cave moonmilk indicates that this genus may have an active role in moonmilk formation, as evidenced by the precipitation of calcite, witherite, and struvite in different culture media. This review provides an overview of environmental Crossiella, particularly in caves, and discusses its role in biomineralization processes and bioactive compound production.

Along the northern littoral of the Iberian Peninsula, from Cuerres (Asturias) to Oyambre (Cantabria) there are caves, such as El Pindal (World Heritage List). Two geomorphologic maps have been prepared: a general scaled 1:25000, and a detail one of the cave, with erosional and depositional landforms geomorphologic units. A relative Quaternary chronology for the depositional landforms, uses colour spots. Marine morphologies suitable for determining past sea-level positions were surveyed to identify the elevation of past high-stands and reconstructing paleo-shorelines. As a result, the study of seven erosional surfaces (rasas) in quartzites and six on limestones led to reconstructing a general sequence between 275–120 m and 90–1 m above sea level (a.s.l.) respectively. Around the El Pindal cave there are four rasas cut on quartzites (171–160 m) and four cut on limestone (65–32 m). Other additional indicators of paleoshorelines are: 24–25 m entrance to the El Pindal cave, 20–21 m lower Pindal, 15–17 m marine terrace, 9–10 m shelter, 2–3 m notches and 0–1 m present rasa. Considering the elevation rates for the various rasas, an estimated value of 0.066 mm/y as the most probable, it is concluded that the beginning of Quaternary lays at 172 m a.s.l.

Rull cave is a karstic cave located in Vall d’Ebo (Alicante, Southeast of Spain) developed in massive Miocene conglomerates and Cretaceous limestones. Processes in soil above Rull cave and outdoor atmosphere directly influence the underground environment of the cave. Continuous and discrete monitoring of cave atmosphere and soil (from 2012 to 2022) allows to characterise the spatial distribution and temporal variations of the gaseous concentration (222Rn and CO2) and understand the relationship between the processes which occurred in the 3-component system (soil-cave-atmosphere). Besides the presence of visitors, Rull cave maintains stable values of mean temperature (16.2 °C) and relative humidity (97.6%). In an annual cycle the cave presents two different gaseous stages (stagnation and ventilation). Maximum average values of CO2 and 222Rn concentration are reached within the stagnation stage, in the warmest period of the year. On the contrary, in the ventilation stage (in the coldest months) the cave reaches the lowest concentrations in its inner atmosphere. For the study period, daily average CO2 and 222Rn concentrations are 2008 ppm and 1745 Bq/m3, respectively. Results show that the dynamics of 222Rn and CO2 in the cave air follow different patterns defined by the complex relationships between external and internal factors. Findings from this study provide substantial information about the environmental situation of the cave atmosphere in terms of air quality for visitors and workers.

Los ambientes kársticos son los ecosistemas subterráneos más representativos a escala global ya que ocupan aproximadamente el 20 % de la superficie terrestre, albergan cavidades próximas a la superficie y forman parte de lo que se conoce como Zona Crítica de la Tierra. A pesar de que podrían jugar un papel importante en la regulación de la composición de la atmósfera externa, los ecosistemas subterráneos aún no han sido incluidos en las estimaciones globales de los balances de los principales GEI, pero son cada vez más numerosos los trabajos de investigación en este campo..., Karstic environments are the most representative underground ecosystems on a global scale since they cover approximately 20% of the land surface of the Earth and contain shallow caves that belong to the Critical Zone of the Earth. Although they could play an important role in regulation of the external atmosphere composition, the underground ecosystems have not yet been included in the annual carbon balances of the main GHGs. However, the research interest in this field has recently increased...

In the absence of sunlight, caves harbor a great diversity of microbial colonies to extensive biofilms with different sizes and colors visible to the naked eye. One of the most widespread and visible types of biofilm are those with yellow hues that can constitute a serious problem for the conservation of cultural heritage in many caves, such as Pindal Cave (Asturias, Spain). This cave, declared a World Heritage Site by UNESCO for its Paleolithic parietal art, shows a high degree of development of yellow biofilms that represents a real threat to the conservation of painted and engraved figures. This study aims to: 1) identify the microbial structures and the most characteristic taxa composing the yellow biofilms, 2) seek the linked microbiome reservoir primarily contributing to their growth; 3) seed light on the driving vectors that contribute to their formation and determine the subsequent proliferation and spatial distribution. To achieve this goal, we used amplicon-based massive sequencing, in combination with other techniques such as microscopy, in situ hybridization and environmental monitoring, to compare the microbial communities of yellow biofilms with those of drip waters, cave sediments and exterior soil. The results revealed microbial structures related to the phylum Actinomycetota and the most characteristic bacteria in yellow biofilms, represented by the genera wb1-P19, Crossiella, Nitrospira, and Arenimonas. Our findings suggest that sediments serve as potential reservoirs and colonization sites for these bacteria that can develop into biofilms under favorable environmental and substrate conditions, with a particular affinity for speleothems and rugged-surfaced rocks found in condensation-prone areas. This study presents an exhaustive study of microbial communities of yellow biofilms in a cave, which could be used as a procedure for the identification of similar biofilms in other caves and to design effective conservation strategies in caves with valuab

© 2006 Elsevier Ltd. All rights reserved. The experiment was supported by the C.I.C.Y.T. CGL2004-03564/BTE, Communidad de Madrid, MATERNAS-S-0505/MAT/000094 and BFM2002-00048 Projects. Thanks are also due to Martin Fernandez (Colmenar Viejo, Madrid) for the valuable help in the Cabrera granite quarries for providing the calcite samples. The authors thank R. Schmidtling of the Museum Research Laboratory of the Getty Conservation Institute for the critical review of the manuscript., Cabrera (Madrid) low-Mg calcites exhibit: (i) an unusual twofold elevation in X-ray diffraction pattern intensity; (ii) a 60-fold elevation of luminescence emission, compared to six common natural calcites selected for comparison purposes; (iii) a natural relatively high radiation level of circa 200 nSv h^-1 not detected in 1300 other calcites from the Natural History Museum of Madrid. Calcites were analysed by the X-ray diffraction powder method (XRD), cathodo-luminescence spectroscopy in scanning electron microscopy (CL-SEM), thermoluminescence (TL), differential thermal analysis (DTA), X-ray fluorescence spectrometry (XRF) and particle size distribution (PSD). The Cabrera calcite study shows: (i) helicoidally distributed steps along the (0001) orientation; (ii) protuberance defects onto the (0001) surface, observed by SEM; (iii) XRF chemical contents of 0.03% MgO, 0.013% of Y_2O_3, and 0.022% of U_3O_8, with accessory amounts of rare earth elements (REE); (iv) DTA dissociation temperature of 879 degrees C; (v) TL maxima peaks at 233 and 297 degrees C whose areas are 60 times compared to other calcites; (vi) spectra CL-SEM bands at 2.0 and 3.4 eV in the classic structure of Mn^2+ activators; (vii) a twofold XRD pattern explained given that sample is a low-Mg calcite. The huge TL and CL emissions of the Cabrera calcite sample must be linked with the uranyl group presence. This intense XRD pattern in low-Mg calcites could bring into being analytical errors., C.I.C.Y.T., Comunidad de Madrid, Depto. de Física de Materiales, Fac. de Ciencias Físicas, TRUE, pub

Castañar Cave (Caceres, Spain) is a unique show cave known for its high natural radiation levels. This study presents a comprehensive analysis of its prokaryotic diversity, specifically focusing on investigating the influence of environmental conditions and substrate characteristics on the prokaryotic community structure in the cave sediments. Additionally, the research aims to evaluate the potential impact of human activities on the cave ecosystem. The identification of distinct bioclimatic zones within the cave was made possible through a combination of environmental and microbial monitoring (ATP assays). The results reveal sediment texture as a significant factor, notably affecting the structure, diversity, and phylogenetic variability of the microbial community, including both Bacteria and Archaea. The proportion of clay minerals in sediments plays a crucial role in regulating moisture levels and nutrient availability. These substrate properties collectively exert a significant selective pressure on the structure of prokaryotic communities within cave sediments. The molecular approach shows that heterotrophic bacteria, including those with chitinolytic enzymes, primarily inhabit the cave. Furthermore, chemoautotrophic nitrifiers such as the archaea Nitrososphaeria and the genus Nitrospira, as well as methanotrophic bacteria from the phyla Methylomirabilota, Pseudomonadota, and Verrucomicrobiota, are also present. Remarkably, despite being a show cave, the cave microbiota displays minimal impacts from human activities and the surface ecosystem. Prokaryotic populations exhibit stability in the innermost areas, while the tourist trail area experiences slightly higher biomass increases due to visitor traffic. This suggests that conservation efforts have successfully limited the entry of external nutrients into the innermost cave areas. Additionally, the results suggest that integrating biomarkers like ATP into environmental monitoring can significantly enhance the m

The genus Crossiella contains two species, C. equi, causing nocardioform placentitis in horses, and C. cryophila, an environmental bacterium. Apart from C. equi, which is not discussed here, environmental Crossiella is rarely reported in the literature; thus, it has not been included among "rare actinobacteria", whose isolation frequency is very low. After C. cryophila, only five reports cover the isolation of Crossiella strains. However, the frequency of published papers on environmental Crossiella has increased significantly in recent years due to the extensive use of next-generation sequencing (NGS) and a huge cascade of data that has improved our understanding of how bacteria occur in the environment. In the last five years, Crossiella has been found in different environments (caves, soils, plant rhizospheres, building stones, etc.). The high abundance of Crossiella in cave moonmilk indicates that this genus may have an active role in moonmilk formation, as evidenced by the precipitation of calcite, witherite, and struvite in different culture media. This review provides an overview of environmental Crossiella, particularly in caves, and discusses its role in biomineralization processes and bioactive compound production.

“Rare actinobacteria” are non-Streptomyces actinobacteria whose isolation frequency is much lower than Streptomyces strains, commonly isolated by conventional methods [1][2]. Tiwari and Gupta [3][4] reported 120 new genera of “rare actinobacteria” in the first decade of the 21th century. A total of 40 out of 120 genera were isolated from soils, with comparatively lower percentages from other environments: marine and freshwater sediments, marine animals, plants, buildings, etc. A few reports included the rare genera Actinomadura, Nonomuraea, Micromonospora, Streptosporangium, Nocardiopsis, and Pseudonocardia as the most frequent in diverse environments [5][6][7][8][9]. It is noteworthy an abundance of “rare actinobacteria” in extreme environments, as exemplified in Atacama [7] and other deserts [10][11][12][13]. However, Crossiella has not been included among “rare actinobacteria” thus far. Researchers have found that Crossiella is an abundant genus in most studied Spanish caves, whether they are gypsum, karstic or volcanic [14][15][16][17][18][19][20][21], and in other terrestrial and aquatic environments., Texto completo disponible en: https://encyclopedia.pub/entry/45605

Rull cave is a karstic cave located in Vall d’Ebo (Alicante, Southeast of Spain) developed in massive Miocene conglomerates and Cretaceous limestones. Processes in soil above Rull cave and outdoor atmosphere directly influence the underground environment of the cave. Continuous and discrete monitoring of cave atmosphere and soil (from 2012 to 2022) allows to characterise the spatial distribution and temporal variations of the gaseous concentration (222Rn and CO2) and understand the relationship between the processes which occurred in the 3-component system (soil-cave-atmosphere). Besides the presence of visitors, Rull cave maintains stable values of mean temperature (16.2 °C) and relative humidity (97.6%). In an annual cycle the cave presents two different gaseous stages (stagnation and ventilation). Maximum average values of CO2 and 222Rn concentration are reached within the stagnation stage, in the warmest period of the year. On the contrary, in the ventilation stage (in the coldest months) the cave reaches the lowest concentrations in its inner atmosphere. For the study period, daily average CO2 and 222Rn concentrations are 2008 ppm and 1745 Bq/m3, respectively. Results show that the dynamics of 222Rn and CO2 in the cave air follow different patterns defined by the complex relationships between external and internal factors. Findings from this study provide substantial information about the environmental situation of the cave atmosphere in terms of air quality for visitors and workers.

Los ambientes subterráneos son ecosistemas únicos ubicados bajo la superficie terrestre, tanto de origen natural como resultado de la actividad humana. Muchos de estos ambientes destacan por albergar un valioso patrimonio natural y cultural que debe ser protegido y conservado para las generaciones futuras. Albergan una gran diversidad biológica y formaciones minerales especiales, que registran cambios ambientales pasados. Por otro lado, las representaciones de arte rupestre y los yacimientos arqueológicos presentes en muchas cuevas son tesoros culturales de valor incalculable. Estos ecosistemas subterráneos son muy estables ambientalmente y esa estabilidad depende directamente de las variaciones físico-químicas de la atmósfera externa y su interacción con el ambiente subterráneo. El aumento de los gases de efecto invernadero y de la temperatura de las últimas décadas amenazan esa estabilidad. Es crucial investigar la interacción entre los ambientes subterráneos y la atmósfera para diseñar estrategias efectivas de conservación a corto plazo.

The advent of molecular tools, and particularly next-generation sequencing, has dramatically changed our knowledge of the diversity of microbial life on Earth. In recent decades, many studies on different terrestrial environments have described the intriguing diversity and abundance of Euzebyales/Euzebyaceae/Euzebya, yet its role in the geochemical cycle of elements is unknown. In addition, as far as we know, no Euzebya isolates have been obtained from terrestrial niches. In this review, it is shown that Euzebya and other haloalkaliphilic bacteria can thrive under harsh conditions, such as high concentrations of sodium and/or calcium, high electric conductivity and alkaline pH, highly variable temperatures, and water fluctuations. These conditions are quasi-extreme in the studied terrestrial environments. However, the culture media used so far for isolation have failed to reproduce the original conditions of these terrestrial ecosystems, and this is likely the reason why strains of Euzebya and other bacteria that inhabit the same niche could not be isolated. It is expected that culture media reproducing the environmental conditions outlined in this review could cope with the isolation of terrestrial Euzebya and other haloalkaliphilic genera.

Along the northern littoral of the Iberian Peninsula, from Cuerres (Asturias) to Oyambre (Cantabria) there are caves, such as El Pindal (World Heritage List). Two geomorphologic maps have been prepared: a general scaled 1:25000, and a detail one of the cave, with erosional and depositional landforms geomorphologic units. A relative Quaternary chronology for the depositional landforms, uses colour spots. Marine morphologies suitable for determining past sea-level positions were surveyed to identify the elevation of past high-stands and reconstructing paleo-shorelines. As a result, the study of seven erosional surfaces (rasas) in quartzites and six on limestones led to reconstructing a general sequence between 275–120 m and 90–1 m above sea level (a.s.l.) respectively. Around the El Pindal cave there are four rasas cut on quartzites (171–160 m) and four cut on limestone (65–32 m). Other additional indicators of paleoshorelines are: 24–25 m entrance to the El Pindal cave, 20–21 m lower Pindal, 15–17 m marine terrace, 9–10 m shelter, 2–3 m notches and 0–1 m present rasa.Considering the elevation rates for the various rasas, an estimated value of 0.066 mm/y as the most probable, it is concluded that the beginning of Quaternary lays at 172 m a.s.l.

During the eruption at Cumbre Vieja ridge (La Palma, Canary Islands, 2021) a radon (222Rn) detector (CORENTIUM Pro alpha particles counter) was emplaced inside the Las Palomas lava tube (San Juan eruption, 1949). In addition, a CO2 meter logger was emplaced to determine relationships between the 2021 eruption and radon plus CO2 inner fluxes. There is a geostructural relationship between the 1949 and 2021 eruptions, probably connected by a previous fault, shown the volcanic vents¿ alignment trending NW-SE. In October 2021, the radon and CO2 loggers were moved to the upper part of the lava tube, in the San Juan volcanic vent (Llano del Banco hollow dyke). Once the eruption ended (in early 2022) both loggers were placed in one newly formed lava tube, and data will be collected in February 2023. Preliminary results show daily average radon values ranging between 2 - 9 Bq/m3, although sporadic peaks of about 270 and 650 Bq/m3 were recorded related to volcano-tectonic earthquakes and volcanic intensity. In general, basaltic eruptions of alkaline affinity show low radon values due to the low concentration in the magma body of uranium and related chemical elements (Th, Ra, etc.). Geochemical analysis of emitted lavas shows a U concentration of about 1 to 5 ppm (g/g) and Th 9.5 ppm. Summer values of Rn increased up to 3 KBq/m3, related to the climate conditions instead of volcanic activity.

Pindal Cave (Asturias, Spain) and its Paleolithic art have been part of the UNESCO World Heritage List since 2008. The importance of this Paleolithic art led to a research project that deals with deciphering the relationships between environmental conditions and microbial activity in natural underground ecosystems and its application to the design of conservation strategies. The Pindal karstic system develops in a calcareous massif (Carboniferous) modeled in the form of an erosional marine terrace (rasa) by coastal morphogenetic processes. This marine terrace level is located at an elevation of 30-68 meters above current sea level and constitutes the preferred catchment area for runoff water from another higher level (140-170 m) developed on quartzite layers with very low permeability (Ordovician). The cave is the main endokarstic feature of the system. On the surface of the 30-68 m rasa there are numerous exokarstic structures of sinkhole and polje type. On one of the sinkholes, located almost vertically to the cave, a cattle farm was installed in 1995. Between October 19 and 23, 2019, an extreme episode of rainfall occurred in the area with a cumulative total of 209 l/m2. This event caused a strong accumulation of water in the aforementioned sinkhole that finally collapsed, flooding the cave for several days. Immediately after the cave had been drained, environmental measurements and sediment samplings were carried out at various points in order to determine the changes caused in the underground ecosystem. In the most affected area by the flood, changes in humidity and temperature of air and sediments were recorded for several months. Biogeochemical data indicated that the sediments deposited as a result of the flooding presented high values of available organic matter, nitrogen, phosphorus and potassium, much higher than those of the innermost areas did not directly affect by the flooding. The comparative microbiological study of sediment samples revealed that th

Lava caves differ from karstic caves in their genesis and mineral composition. Subsurface microbiology of lava tube caves in Canary Islands, a volcanic archipelago in the Atlantic Ocean, is largely unknown. We have focused the investigation in a representative lava tube cave, Fuente de la Canaria Cave, in La Palma Island, Spain, which presents different types of speleothems and colored microbial mats. Four samples collected in this cave were studied using DNA next-generation sequencing and field emission scanning electron microscopy for bacterial identification, functional profiling, and morphological characterization. The data showed an almost exclusive dominance of Bacteria over Archaea. The distribution in phyla revealed a majority abundance of Proteobacteria (37,89%), followed by Actinobacteria, Acidobacteria and Candidatus Rokubacteria. These four phyla comprised a total relative abundance of 72,96%. The main ecological functions in the microbial communities were chemoheterotrophy, methanotrophy, sulfur and nitrogen metabolisms, and CO2 fixation; although other ecological functions were outlined. Genome annotations of the especially representative taxon Ga0077536 (about 71% of abundance in moonmilk) predicted the presence of genes involved in CO2 fixation, formaldehyde consumption, sulfur and nitrogen metabolisms, and microbially-induced carbonate precipitation. The detection of several putative lineages associated with C, N, S, Fe and Mn indicates that Fuente de la Canaria Cave basalts are colonized by metabolically diverse prokaryotic communities involved in the biogeochemical cycling of major elements.

Airborne microorganisms can cause important conservation problems in caves with Paleolithic art and therefore the knowledge of cave aerodynamic is essential. La Garma Cave (Cantabria, Spain), an exceptional archaeological site with several levels of galleries interconnected and two entrances, presents a complex atmospheric dynamics. An approach including aerobiological sampling together with microclimate monitoring was applied to assess the factors controlling the origin of airborne fungi. Here we show that winter ventilation is critical for the increasing of Basidiomycota spores in the cave air and the highest concentrations were found in the most ventilated areas. On the contrary, Ascomycota spores prevailed in absence of ventilation. Besides, most Ascomycota were linked to insects and bats that visit or inhabit the cave. The combination of aerobiological and microclimate data constitutes a good approach to evaluate the influence of external climatic conditions and design the most suitable strategies for the conservation of cultural heritage in the cave environment.