167 results on '"Renan P Souza"'
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2. Leaf quality and macrofauna are more important than the presence of trees and shrubs in riparian vegetation for leaf litter breakdown in subtropical highland grassland soil systems
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da Silva, Bruna, Cararo, Emanuel Rampanelli, Lima-Rezende, Cássia Alves, Galeti, Gabriela, Dal Magro, Jacir, and Rezende, Renan de Souza
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- 2024
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3. Does the compost barn system bedding as a source of organic fertilizer cause toxicity in soil invertebrates?
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Edpool Rocha Silva, Tamires Rodrigues dos Reis, Vicente Flores Motta Schneider, Dilmar Baretta, Renan de Souza Rezende, and Carolina Riviera Duarte Maluche-Baretta
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animal bedding ,e. andrei ,f. candida ,terrestrial ecotoxicology. ,Environmental sciences ,GE1-350 - Abstract
Modernizing dairy cattle farming techniques promotes a gradual shift from traditional pasture-based systems to confinement with higher investments in animal comfort and welfare, such as the compost barn system (CBS). In this method, animals generate composted waste in the barn itself, on the bedding where they are housed, which is of high fertilizing potential, and whose subsequent application to soils can affect the functionality of edaphic organisms. The study aimed to evaluate the toxicity on edaphic organisms (Folsomia candidaand Eisenia andrei) of increasing doses of CB bedding applied to two soils with different textural characteristics. Ecotoxicological tests were standardized following the recommendations of ISO 11268-1 and 11268-2 for earthworms, and ISO 11267 for springtails. The experimental design was completely randomized with five replications, with the treatments being CB bedding doses (0, 6, 12, 18, 24, and 30 t of waste ha-1). Data were subjected to normality (Shapiro-Wilk) and variance homogeneity (Levene) tests, followed by analysis of variance (ANOVA) and post-hoc comparisons using the Dunnett test (p
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- 2024
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4. Ecophysiological investigation of the cyanobacteria Anabaenopsis elenkinii and Limnospira platensis: predominant species in saline/alkaline lakes of the Pantanal Wetland
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Kleber Renan de Souza Santos, Guilherme Scotta Hentschke, Arnaldo Yoso Sakamoto, Luciana Retz de Carvalho, and Célia Leite Sant’Anna
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cyanobacterial physiology ,cyanobacterial growth ,heterocyte formation ,nitrogen availability ,tropical environment ,Ecology ,QH540-549.5 - Abstract
Abstract: Aim In this study, we investigated the distribution of Anabaenopsis elenkinii and Limnospira platensis in the saline-alkaline lakes of Nhecolândia (Pantanal wetland) and evaluated the impact of pH, temperature, and nitrogen on their growth and development to understand their ecological responses, showing insights into their ecophysiology in both cultured and natural environments. Methods Both species were collected in the subsurface, using a plastic bottle (200 mL) and the parameters temperature, conductivity, and pH were measured in situ. From these samples, the strains A. elenkinii CCIBt1059 and L. platensis CCIBt3335 were isolated and underwent six different cultivation treatments, in triplicate, during 30 days, with daily cell count, photoperiod of 12-12 hours of light-dark, and light intensity between 80-100 µmol photons m-2.s-1, using BG-11 modified medium, as follows: nitrate concentration experiments were performed with a 750 mg.L-1 NaNO3 (50%) and a nitrogen-free condition (0%) (T1 vs T2); temperature experiments were performed with 30 °C and 35 °C (T3 vs T4); pH experiments with 10.5 and 7.0 (T5 vs T6). The adopted control conditions were BG-11m medium (3% NaNO3, 45 mg.L-1), pH adjusted to 9.5, and temperature set at 25 °C. Results We have found that the treatment with the highest nitrogen availability (T1), pH of 9.5, and a temperature of 25 °C, provides the most favorable conditions for the growth of both studied species. In nature, A. elenkinii occurred predominantly between pH 9.04 to 10.4 (average 9.8) and L. platensis at pH 9.22 to 10.23 (mean 9.9), highlighting the alkaliphilic nature of these species. Furthermore, we observed that temperature influences the frequency of heterocyte formation in A. elenkinii. At elevated temperatures (30 and 35 °C), the frequency of heterocytes was higher compared to 25 °C during the exponential growth phase, indicating that increased heterocyte formation is a strategy in response to temperature stress. Conclusions This research provides valuable insights into the ecological aspects and optimization of the cultivation of the two species studied, which hold ecological significance to saline lakes. Further studies are recommended to explore their potential biotechnological applications.
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- 2024
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5. Spatial variability of edaphic attributes on Coleoptera (Insecta) in land use systems
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Natânie Bigolin Narciso, Pâmela Niederauer Pompeo, Dilmar Baretta, Renan de Souza Rezende, and Carolina Riviera Duarte Maluche Baretta
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bioindicadores ,paisagem subtropical ,geoestatística ,Environmental sciences ,GE1-350 - Abstract
A alteração na estrutura natural da paisagem afeta condições abióticas e promove uma resposta biológica da comunidade local. A diversidade de organismos edáficos está relacionada com a diversidade de outros táxons e características abióticas, representando potenciais bioindicadores do ecossistema. O objetivo deste trabalho foi identificar quais atributos do solo explicam a comunidade de coleópteros e explorar seus efeitos por meio da modelagem espacial. O estudo foi desenvolvido em três paisagens do oeste de Santa Catarina (Brasil) localizadas em: Chapecó, Pinhalzinho e São Miguel do Oeste. Os sistemas de uso e cobertura do solo identificados foram: plantio direto, floresta nativa, pastagem, plantio de eucalipto, integração lavoura-pecuária e capoeira. Foram realizadas coletas de solo, liteira e coleópteros. A seleção das variáveis foi realizada pela Análise de Táxons Indicadores de Limiares e a modelagem espacial pela Geoestatística. Maiores valores de resistência a penetração associados ao sistema de plantio direto promoveram menor abundância de coleópteros da família Staphylinidae, condicionadas pela porosidade total do solo. Menores valores de umidade volumétrica, identificados em sistema plantio direto próximo de fragmentos de vegetação nativa, promoveram maior abundância da família Nitidulidae, em razão da adaptabilidade da família ao ambiente seco. A tendência de maior concentração de carbono microbiano em áreas de vegetação nativa explicou a maior abundância da família Chrysomelidae nessas áreas, em decorrência dos hábitos fitófagos das espécies dessa família. Dessa forma, a comunidade de coleópteros possui potencial como bioindicador da qualidade do solo e suas relações com os atributos físicos — químicos e microbiológicos — do solo podem ser modeladas espacialmente por meio da Geoestatística.
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- 2024
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6. Genotype-based ancestral background consistently predicts efficacy and side effects across treatments in CATIE and STAR*D.
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Daniel E Adkins, Renan P Souza, Karolina Aberg, Shaunna L Clark, Joseph L McClay, Patrick F Sullivan, and Edwin J C G van den Oord
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Medicine ,Science - Abstract
Only a subset of patients will typically respond to any given prescribed drug. The time it takes clinicians to declare a treatment ineffective leaves the patient in an impaired state and at unnecessary risk for adverse drug effects. Thus, diagnostic tests robustly predicting the most effective and safe medication for each patient prior to starting pharmacotherapy would have tremendous clinical value. In this article, we evaluated the use of genetic markers to estimate ancestry as a predictive component of such diagnostic tests. We first estimated each patient's unique mosaic of ancestral backgrounds using genome-wide SNP data collected in the Clinical Antipsychotic Trials of Intervention Effectiveness (CATIE) (n = 765) and the Sequenced Treatment Alternatives to Relieve Depression (STAR*D) (n = 1892). Next, we performed multiple regression analyses to estimate the predictive power of these ancestral dimensions. For 136/89 treatment-outcome combinations tested in CATIE/STAR*D, results indicated 1.67/1.84 times higher median test statistics than expected under the null hypothesis assuming no predictive power (p
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- 2013
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7. Chemistry Matters: High Leaf Litter Consumption Does Not Represent a Direct Increase in Shredders’ Biomass
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Cararo, Emanuel Rampanelli, Bernardi, João Pedro, Lima-Rezende, Cássia Alves, Magro, Jacir Dal, and Rezende, Renan de Souza
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- 2023
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8. Ethyl acetate fractions of Myrciaria floribunda, Ocotea pulchella, and Ocotea notata exhibit promising in vitro activity against Sporothrix brasiliensis isolates with low susceptibility to itraconazole
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de Souza, Lais Cavalcanti dos Santos Velasco, Reis, Nathália Faria, Alcântara, Lucas Martins, da Silveira Souto, Simone Rocha Leal, de Araújo Penna, Bruno, Santos, Renan Caetano Souza, Robbs, Bruno Kaufmann, Machado, Francisco Paiva, Castro, Helena Carla, Machado, Ricardo Luiz Dantas, Rocha, Leandro, and de Souza Baptista, Andréa Regina
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- 2023
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9. Molecular, morphological and ecological studies of Limnospira platensis (Cyanobacteria), from saline and alkaline lakes, Pantanal Biome, Brazil
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Kleber Renan de Souza Santos, Guilherme Scotta Hentschke, Graciela Ferrari, Ana Paula Dini Andreote, Marli de Fátima Fiore, Vitor Vasconcelos, and Célia Leite Sant’Anna
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salines ,extreme environments ,biodiversity ,polyphasic approach ,new combination ,Environmental sciences ,GE1-350 - Abstract
We studied nineteen populations of A. platensis (Microcoleaceae, Cyanobacteria), from Pantanal (Brazil) shallow, saline and alkaline lakes. The lakes are connected to the Paraná and Paraguay Rivers Basins, and during wet seasons, the waters flow towards La Plata River estuary. Morphology of natural populations and cultures were analyzed using optical microscope, and 16S rDNA sequences were used for the BI and ML phylogenetic analysis. The morphological analysis shows that our populations fit in the original description of A. platensis, but with additional aerotopes. Also, it is evident that these structures are facultative and the species is planktonic, rather than benthic without aerotopes, as originally described. The phylogenetic analysis shows our strains in the monophyletic Limnospira clade. Considering that, in this paper we transfer the species A. platensis to the genus Limnospira, based on phylogenetic and morphological data. This new taxonomical combination is supported also by ecological data, and indicates that the species is more related and abundant in Pantanal, than in La Plata Basin, region from where it was originally described. According to our results, L. platensis is planktonic or benthic and typical from saline, alkaline and warm waters.
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- 2023
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10. Effect of agriculture land use on standard cellulosic substrates breakdown and invertebrates’ community
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Cavallet, Bruna Valencio, Silva, Edpool Rocha, Baretta, Carolina Riviera Duarte Maluche, and Rezende, Renan de Souza
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- 2022
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11. Predator presence influences life history traits of Aedes aegypti
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Borges, William Gabriel, Cozzer, Gilberto Dinis, Durigon, Giovana Rech, Lima-Rezende, Cássia Alves, and Rezende, Renan de Souza
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- 2023
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12. Genomic and Biological Characterization of Ralstonia solanacearum Inovirus Brazil 1, an Inovirus that Alters the Pathogenicity of the Phytopathogen Ralstonia pseudosolanacearum
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de Almeida, Juliana Cristina Fraleon, da Silva Xavier, André, Cascardo, Renan de Souza, de Rezende, Rafael Reis, de Souza, Flavia Oliveira, Lopes, Carlos Alberto, and Alfenas-Zerbini, Poliane
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- 2022
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13. Artificial intelligence in the clinical pharmacy service in a public hospital in Belo Horizonte/MG
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Clara Lemos LEITÃO, Amanda Fonseca MEDEIROS, Elaine Ferreira DIAS, Renan Pedra SOUZA, and Maria Auxiliadora MARTINS
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Public aspects of medicine ,RA1-1270 ,Pharmacy and materia medica ,RS1-441 ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Objective: to evaluate aspects related to the analysis of prescriptions by clinical pharmacists and the rate of medication-related errors after the implementation of an AI tool for the analysis of medical prescriptions in a large public teaching hospital in the city of Belo Horizonte/MG. Method: This is an observational study in which the results of the analysis of medical prescriptions performed in two periods were verified: the first (denoted BEFORE), period previously to the use of the AI tool (NoHarm.ai), in the months of March to September 2021; the second (named AFTER), comprises the same period in 2022, already in use of the AI tool. Results: In the BEFORE period, it was found that the rate of prescriptions evaluated was 0.6%, with an error rate of 13% and an average of 85 pharmaceutical interventions/month, which resulted in average savings of direct medication costs of R$1020.76/month. In the AFTER period, there was a 49% evaluated prescription rate and a 0.3% error rate and an average of 239 pharmaceutical interventions/month, with an estimated savings of R$ 7848.39/month. Conclusion: The use of an AI tool contributed substantially to the pharmaceutical analysis of medical prescriptions with an average increase of 50% in the prescriptions evaluated, a 43-fold reduction in the number of errors and generated almost triple the number of pharmaceutical interventions after the implementation of the tool, in addition to the direct savings obtained with these interventions that increased sevenfold. The results of this study show that the use of an AI tool probable save of financial resources, increased productivity of the Clinical Pharmacy Service, and increased safety related to the medication use.
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- 2023
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14. Characterization of a new mitovirus infecting the phytopathogenic fungus Microdochium albescens
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de Rezende, Rafael Reis, de Oliveira Souza, Flávia, Leal, Lorhan Lima, Morgan, Túlio, Bermudez, Johan Manuel Murcia, Cascardo, Renan de Souza, de Barros, Danielle Ribeiro, and Alfenas-Zerbini, Poliane
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- 2021
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15. Macroinvertebrados bentônicos como indicadores da qualidade da água em riachos de campos e florestas de altitudes
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Jean Carlo Bacca, Emanuel Rampanelli Cararo, Jacir Dal Magro, and Renan de Souza Rezende
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campos ,bmwp ,ept ,qualidade ambiental ,poluentes emergêntes ,Physical geography ,GB3-5030 ,Geography (General) ,G1-922 - Abstract
Os campos sulinos são ambientes sensíveis que vêm sofrendo considerável diminuição em área ao longo dos anos, principalmente para dar lugar a silvicultura e monoculturas. Além disso, por se tratar de vegetação predominante gramínea, estas áreas são utilizadas largamente pela pecuária. Assim, nosso objetivo foi avaliar os impactos da presença e manejo de áreas de silvicultura e pecuária, através da riqueza e abundância dos macronivertebrados aquáticos bentônicos em riachos do Refúgio da Vida silvestre Campos de Palmas PR. Para tal, foram amostrados dez riachos com quatro fitofisionomias diferentes. Para verificar a qualidade ambiental, foram utilizados os índices BMWP e EPT, além da verificação da presença de poluentes emergentes. Os resultados demonstram que a presença de áreas de silvicultura e o manejo do gado possuem os valores mais baixos de BMWP e EPT. Isso demonstra a fragilidade ambiental nas áreas de campos que possuem criação extensiva de gado. Os demais pontos obtiveram índices satisfatórios na qualidade da água.
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- 2022
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16. Litter inputs and standing stocks in riparian zones and streams under secondary forest and managed and abandoned cocoa agroforestry systems
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Haialla Carolina Rialli Santos Brandão, Camila Andrade Coqueiro Moraes, Ana Paula Silva, José Francisco Gonçalves Júnior, Renan de Souza Rezende, and Daniela Mariano Lopes da Silva
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Riparian vegetation ,Cocoa ,Tropical streams ,Litterfall ,Agroforestry system ,Medicine ,Biology (General) ,QH301-705.5 - Abstract
Background Cocoa is an important tropical tree crop that is mainly cultivated in agroforestry systems (AFS). This system, known as cabruca in northeastern Brazil, holds promise to reconcile biodiversity conservation and economic development. However, since cocoa AFS alters forest structure composition, it can affect litter dynamics in riparian zones and streams. Thus, our objective was to determine litter inputs and standing stocks in riparian zones and streams under three types of forest: managed cocoa AFS, abandoned cocoa AFS, and secondary forest. Methods We determined terrestrial litter fall (TI), vertical (VI) and lateral (LI) litter inputs to streams, and litter standing stocks on streambeds (BS) in the Atlantic Forest of northeastern Brazil. Litter was collected every 30 days from August 2018 to July 2019 using custom-made traps. The litter was dried, separated into four fractions (leaves, branches, reproductive organs, and miscellaneous material) and weighed. Results Terrestrial litter fall was similar in all forests, ranging from 89 g m−2 month−1 in secondary forest (SF) to 96 g m−2 month−1 in abandoned cocoa AFS (AC). Vertical input were higher in AC (82 g m−2 month−1) and MC (69 g m−2 month−1) than in SF (40 g m−2 month−1), whereas lateral input were higher in MC (43 g m−2 month−1) than in AC (15 g m−2 month−1) and SF (24 g m−2 month−1). Standing stocks followed the order SF > AC > MC, corresponding to 425, 299 and 152 g m−2. Leaves contributed most to all litter fractions in all forests. Reproductive plant parts accounted for a larger proportion in managed AFS. Branches and miscellaneous litter were also similar in all forests, except for higher benthic standing stocks of miscellaneous litter in the SF. Despite differences in the amounts of litter inputs and standing stocks among the forests, seasonal patterns in the abandoned AFS (AC) were more similar to those of the secondary forest (SF) than the managed AFS, suggesting potential of abandoned AFS to restore litter dynamics resembling those of secondary forests.
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- 2022
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17. How long is long enough? Decreasing effects in Aedes aegypti larval mortality by plant extracts over time
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Gilberto Dinis Cozzer, Renan de Souza Rezende, Junir Antônio Lutinski, Walter Antônio Roman Júnior, Maria Assunta Busato, and Daniel Albeny Simões
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dengue ,vector control ,inseticide ,entomology ,mate herb. ,Environmental sciences ,GE1-350 - Abstract
Aedes aegypti has overcome all kinds of mosquito control attempts over the last century. Strategies for population control resorts to the use of synthetic insecticides, which can lead to problems like human intoxication and environmental contamination. The effects of Bacillus thuringiensis var. israelensis (Bti), Ilex paraguariensis (yerba mate), and Ilex theezans (caúna herb) extracts against A. aegypti larvae were evaluated. The bioassays were conducted under controlled laboratory conditions of temperature (27 ± 3°C) and photoperiod (12 h). Hydroalcoholic extract of the leaves of I. theezans displayed better residual effect compared to the aqueous extract of I. paraguariensis fruits. The strongest residual effect of I. theezans was probably due to the presence of certain chemicals in its leaves, such as coumarins, hemolytic saponins, and cyanogenic glucosides, which were absent in I. paraguariensis. The results herein contributed to the prospection of natural insecticides and opened the possibility for subsequent studies on the use of plant extracts in field situations in a short-time scale.
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- 2021
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18. Association between ACE2 and TMPRSS2 nasopharyngeal expression and COVID-19 respiratory distress
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Átila Duque Rossi, João Locke Ferreira de Araújo, Tailah Bernardo de Almeida, Marcelo Ribeiro-Alves, Camila de Almeida Velozo, Jéssica Maciel de Almeida, Isabela de Carvalho Leitão, Sâmila Natiane Ferreira, Jéssica da Silva Oliveira, Hugo José Alves, Helena Toledo Scheid, Débora Souza Faffe, Rafael Mello Galliez, Renata Eliane de Ávila, Gustavo Gomes Resende, Mauro Martins Teixeira, COVID-19 UFRJ Workgroup, Orlando da Costa Ferreira Júnior, Terezinha Marta P. P. Castiñeiras, Renan Pedra Souza, Amilcar Tanuri, Renato Santana de Aguiar, Shana Priscila Coutinho Barroso, and Cynthia Chester Cardoso
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Medicine ,Science - Abstract
Abstract ACE2 and TMPRSS2 are key players on SARS-CoV-2 entry into host cells. However, it is still unclear whether expression levels of these factors could reflect disease severity. Here, a case–control study was conducted with 213 SARS-CoV-2 positive individuals where cases were defined as COVID-19 patients with respiratory distress requiring oxygen support (N = 38) and controls were those with mild to moderate symptoms of the disease who did not need oxygen therapy along the entire clinical course (N = 175). ACE2 and TMPRSS2 mRNA levels were evaluated in nasopharyngeal swab samples by RT-qPCR and logistic regression analyzes were applied to estimate associations with respiratory outcomes. ACE2 and TMPRSS2 levels positively correlated with age, which was also strongly associated with respiratory distress. Increased nasopharyngeal ACE2 levels showed a protective effect against this outcome (adjOR = 0.30; 95% CI 0.09–0.91), while TMPRSS2/ACE2 ratio was associated with risk (adjOR = 4.28; 95% CI 1.36–13.48). On stepwise regression, TMPRSS2/ACE2 ratio outperformed ACE2 to model COVID-19 severity. When nasopharyngeal swabs were compared to bronchoalveolar lavages in an independent cohort of COVID-19 patients under mechanical ventilation, similar expression levels of these genes were observed. These data suggest nasopharyngeal TMPRSS2/ACE2 as a promising candidate for further prediction models on COVID-19.
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- 2021
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19. Numerical and experimental evaluation of the thermally stratified atmospheric boundary layer in wind tunnels
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Renan de Souza Teixeira, Daniel José Nahid Mansur Chalhub, and Pollyana de L Massari
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atmospheric boundary layer ,Reynolds-averaged Navier-Stokes ,heat transfer ,computational fluid dynamics ,Mining engineering. Metallurgy ,TN1-997 ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
Abstract The atmospheric boundary layer (ABL) flow occurs due to the interaction between the Earth’s surface and atmosphere, and it usually happens under thermal stratification. Therefore, in order to emulate this phenomenon, atmospheric wind tunnels need appropriate devices, such as spires and cubical roughness elements, at the entrance of the wind tunnel to create atmospheric characteristics for the analysis. In the current study, numerical and experimental investigations of the thermally stratified boundary layer are performed. The experimental data are measured using Inmetro’s atmospheric wind tunnel. Two different spires set configurations and inlet velocities are considered. Moreover, the compressible Navier-Stokes equations using the k-epsilon turbulence model are computed by OpenFOAM opensource software. The simulated results and measured data presented a good overall agreement and showed that the proposed configuration provides the desired thermal and dynamic boundary layer necessary for the study of ABL.
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- 2021
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20. An analysis on paradoxical gender equality+ policies and the violence in Brazil
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Renan de Souza
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women ,lgbtq ,brazil ,violence ,gender ,Anthropology ,GN1-890 ,Political science ,Social Sciences - Abstract
Brazil records alarming rates of epidemic violence against women and LGBTQ+. According to statistics, the country ranks as the fifth most violent for women and the deadliest in the world for homosexuals. On the other hand, progressive policies to support both groups have been implemented by different public administrations in the last decades generating remarkable milestones. Despite being considered as cutting-edge, those actions have not necessarily translated into a reduction of violence. One explanation for these paradoxes between progressive policies to protect women, LGBTQ+ and the frequent violence against these groups, might be found in historical, cultural, and religious roots. This article highlights that, notwithstanding that some progress was made in Brazil, the rise of conservative and far-right groups may undermine all the advancement reached in the last decades, which could lead to the aggravation of the gender-based violence in the country.
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- 2020
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21. Multi-ancestry GWAS of the electrocardiographic PR interval identifies 202 loci underlying cardiac conduction
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Ioanna Ntalla, Lu-Chen Weng, James H. Cartwright, Amelia Weber Hall, Gardar Sveinbjornsson, Nathan R. Tucker, Seung Hoan Choi, Mark D. Chaffin, Carolina Roselli, Michael R. Barnes, Borbala Mifsud, Helen R. Warren, Caroline Hayward, Jonathan Marten, James J. Cranley, Maria Pina Concas, Paolo Gasparini, Thibaud Boutin, Ivana Kolcic, Ozren Polasek, Igor Rudan, Nathalia M. Araujo, Maria Fernanda Lima-Costa, Antonio Luiz P. Ribeiro, Renan P. Souza, Eduardo Tarazona-Santos, Vilmantas Giedraitis, Erik Ingelsson, Anubha Mahajan, Andrew P. Morris, Fabiola Del Greco M, Luisa Foco, Martin Gögele, Andrew A. Hicks, James P. Cook, Lars Lind, Cecilia M. Lindgren, Johan Sundström, Christopher P. Nelson, Muhammad B. Riaz, Nilesh J. Samani, Gianfranco Sinagra, Sheila Ulivi, Mika Kähönen, Pashupati P. Mishra, Nina Mononen, Kjell Nikus, Mark J. Caulfield, Anna Dominiczak, Sandosh Padmanabhan, May E. Montasser, Jeff R. O’Connell, Kathleen Ryan, Alan R. Shuldiner, Stefanie Aeschbacher, David Conen, Lorenz Risch, Sébastien Thériault, Nina Hutri-Kähönen, Terho Lehtimäki, Leo-Pekka Lyytikäinen, Olli T. Raitakari, Catriona L. K. Barnes, Harry Campbell, Peter K. Joshi, James F. Wilson, Aaron Isaacs, Jan A. Kors, Cornelia M. van Duijn, Paul L. Huang, Vilmundur Gudnason, Tamara B. Harris, Lenore J. Launer, Albert V. Smith, Erwin P. Bottinger, Ruth J. F. Loos, Girish N. Nadkarni, Michael H. Preuss, Adolfo Correa, Hao Mei, James Wilson, Thomas Meitinger, Martina Müller-Nurasyid, Annette Peters, Melanie Waldenberger, Massimo Mangino, Timothy D. Spector, Michiel Rienstra, Yordi J. van de Vegte, Pim van der Harst, Niek Verweij, Stefan Kääb, Katharina Schramm, Moritz F. Sinner, Konstantin Strauch, Michael J. Cutler, Diane Fatkin, Barry London, Morten Olesen, Dan M. Roden, M. Benjamin Shoemaker, J. Gustav Smith, Mary L. Biggs, Joshua C. Bis, Jennifer A. Brody, Bruce M. Psaty, Kenneth Rice, Nona Sotoodehnia, Alessandro De Grandi, Christian Fuchsberger, Cristian Pattaro, Peter P. Pramstaller, Ian Ford, J. Wouter Jukema, Peter W. Macfarlane, Stella Trompet, Marcus Dörr, Stephan B. Felix, Uwe Völker, Stefan Weiss, Aki S. Havulinna, Antti Jula, Katri Sääksjärvi, Veikko Salomaa, Xiuqing Guo, Susan R. Heckbert, Henry J. Lin, Jerome I. Rotter, Kent D. Taylor, Jie Yao, Renée de Mutsert, Arie C. Maan, Dennis O. Mook-Kanamori, Raymond Noordam, Francesco Cucca, Jun Ding, Edward G. Lakatta, Yong Qian, Kirill V. Tarasov, Daniel Levy, Honghuang Lin, Christopher H. Newton-Cheh, Kathryn L. Lunetta, Alison D. Murray, David J. Porteous, Blair H. Smith, Bruno H. Stricker, André Uitterlinden, Marten E. van den Berg, Jeffrey Haessler, Rebecca D. Jackson, Charles Kooperberg, Ulrike Peters, Alexander P. Reiner, Eric A. Whitsel, Alvaro Alonso, Dan E. Arking, Eric Boerwinkle, Georg B. Ehret, Elsayed Z. Soliman, Christy L. Avery, Stephanie M. Gogarten, Kathleen F. Kerr, Cathy C. Laurie, Amanda A. Seyerle, Adrienne Stilp, Solmaz Assa, M. Abdullah Said, M. Yldau van der Ende, Pier D. Lambiase, Michele Orini, Julia Ramirez, Stefan Van Duijvenboden, David O. Arnar, Daniel F. Gudbjartsson, Hilma Holm, Patrick Sulem, Gudmar Thorleifsson, Rosa B. Thorolfsdottir, Unnur Thorsteinsdottir, Emelia J. Benjamin, Andrew Tinker, Kari Stefansson, Patrick T. Ellinor, Yalda Jamshidi, Steven A. Lubitz, and Patricia B. Munroe
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Science - Abstract
On the electrocardiogram, the PR interval reflects conduction from the atria to ventricles and also serves as risk indicator of cardiovascular morbidity and mortality. Here, the authors perform genome-wide meta-analyses for PR interval in multiple ancestries and identify 141 previously unreported genetic loci.
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- 2020
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22. Integration of Corn and Cane for Ethanol Production: Effects of Lactobacilli Contamination on Fermentative Parameters and Use of Ionizing Radiation Treatment for Disinfection
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Ana Paula Maria da Silva, Pietro Sica, Lucas de Almeida Nobre Pires, Liandra Spironello, Layna Amorim Mota, Gustavo Theodoro Peixoto, Rubens Perez Calegari, Thiago Olitta Basso, Aldo Tonso, Marcelo Pego Gomes, Samir Luiz Somessari, Heitor Gameiro Duarte, Elizabeth S. Ribeiro Somessari, Renan de Souza Carvalho, and Antonio Sampaio Baptista
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biofuels ,sustainability ,biorefinery ,biomass ,antibiotics replacement ,Fermentation industries. Beverages. Alcohol ,TP500-660 - Abstract
Recently, in Brazil, corn ethanol industries are being installed and the integration with sugar/energy-cane has been proposed, using bagasse for cogeneration and the juice to dilute the corn. However, this integration may have some limitations, such as the quality of the cane juice and potential contamination by microorganisms brought with the cane from the field. In this article, we first tested the effects of mixing energy cane juice with corn on fermentative parameters. We also assessed the effects of Lactobacilli. contamination on organic acids produced during the fermentation and fermentation parameters and proposed the use of ionizing radiation to replace antibiotics as a disinfection control method. Our results showed that mixing energy cane juice with corn does not have any negative effect on fermentation parameters, including ethanol production. The contamination with Lactobacilli. considerably increased the production of acetic, lactic, and succinic acid, reducing the pH and ethanol content from 89.2 g L−1 in the sterilized treatment to 72.9 g L−1 in the contaminated treatment. Therefore, for the integration between corn and cane to be applied on an industrial scale, it is essential to have effective disinfection before fermentation. Ionizing radiation (20 kGy) virtually disinfected the wort, showing itself to be a promising technology; however, an economic viability study for adopting it in the industry should be carried out.
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- 2023
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23. Abiotic factors and trophic interactions affect the macroinvertebrate community of bromeliad tanks in a Neotropical Restinga
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Rezende, Renan de Souza, Kroth, Nádia, Capitanio, Bruna Maria, Lima-Rezende, Cássia Alves, Cassol, Angélica Soligo, Cozzer, Gilberto Dinis, Baldissera, Ronei, Breaux, Jennifer Ann, and Albeny-Simões, Daniel
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- 2020
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24. Metformin Treatment Modulates Long Non-Coding RNA Isoforms Expression in Human Cells
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Izabela Mamede C. A. da Conceição, Thomaz Luscher-Dias, Lúcio R. Queiroz, Ana Gabrielle B. de Melo, Carlos Renato Machado, Karina B. Gomes, Renan P. Souza, Marcelo R. Luizon, and Glória R. Franco
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lncRNA ,metformin ,transcriptome ,RNA isoforms ,Genetics ,QH426-470 - Abstract
Long noncoding RNAs (lncRNAs) undergo splicing and have multiple transcribed isoforms. Nevertheless, for lncRNAs, as well as for mRNA, measurements of expression are routinely performed only at the gene level. Metformin is the first-line oral therapy for type 2 diabetes mellitus and other metabolic diseases. However, its mechanism of action remains not thoroughly explained. Transcriptomic analyses using metformin in different cell types reveal that only protein-coding genes are considered. We aimed to characterize lncRNA isoforms that were differentially affected by metformin treatment on multiple human cell types (three cancer, two non-cancer) and to provide insights into the lncRNA regulation by this drug. We selected six series to perform a differential expression (DE) isoform analysis. We also inferred the biological roles for lncRNA DE isoforms using in silico tools. We found the same isoform of an lncRNA (AC016831.6-205) highly expressed in all six metformin series, which has a second exon putatively coding for a peptide with relevance to the drug action. Moreover, the other two lncRNA isoforms (ZBED5-AS1-207 and AC125807.2-201) may also behave as cis-regulatory elements to the expression of transcripts in their vicinity. Our results strongly reinforce the importance of considering DE isoforms of lncRNA for understanding metformin mechanisms at the molecular level.
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- 2022
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25. WGS-Based Lineage and Antimicrobial Resistance Pattern of Salmonella Typhimurium Isolated during 2000–2017 in Peru
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Raquel Hurtado, Debmalya Barh, Bart C. Weimer, Marcus Vinicius Canário Viana, Rodrigo Profeta, Thiago Jesus Sousa, Flávia Figueira Aburjaile, Willi Quino, Renan Pedra Souza, Orson Mestanza, Ronnie G. Gavilán, and Vasco Azevedo
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antimicrobial resistance ,multi-drug resistance ,Salmonella Typhimurium ,whole-genome sequencing ,resistance plasmids ,antimicrobial susceptibility test ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Salmonella Typhimurium is associated with foodborne diseases worldwide, including in Peru, and its emerging antibiotic resistance (AMR) is now a global public health problem. Therefore, country-specific monitoring of the AMR emergence is vital to control this pathogen, and in these aspects, whole genome sequence (WGS)—based approaches are better than gene-based analyses. Here, we performed the antimicrobial susceptibility test for ten widely used antibiotics and WGS-based various analyses of 90 S. Typhimurium isolates (human, animal, and environment) from 14 cities of Peru isolated from 2000 to 2017 to understand the lineage and antimicrobial resistance pattern of this pathogen in Peru. Our results suggest that the Peruvian isolates are of Typhimurium serovar and predominantly belong to sequence type ST19. Genomic diversity analyses indicate an open pan-genome, and at least ten lineages are circulating in Peru. A total of 48.8% and 31.0% of isolates are phenotypically and genotypically resistant to at least one antibiotic, while 12.0% are multi-drug resistant (MDR). Genotype–phenotype correlations for ten tested drugs show >80% accuracy, and >90% specificity. Sensitivity above 90% was only achieved for ciprofloxacin and ceftazidime. Two lineages exhibit the majority of the MDR isolates. A total of 63 different AMR genes are detected, of which 30 are found in 17 different plasmids. Transmissible plasmids such as lncI-gamma/k, IncI1-I(Alpha), Col(pHAD28), IncFIB, IncHI2, and lncI2 that carry AMR genes associated with third-generation antibiotics are also identified. Finally, three new non-synonymous single nucleotide variations (SNVs) for nalidixic acid and eight new SNVs for nitrofurantoin resistance are predicted using genome-wide association studies, comparative genomics, and functional annotation. Our analysis provides for the first time the WGS-based details of the circulating S. Typhimurium lineages and their antimicrobial resistance pattern in Peru.
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- 2022
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26. Common Dysregulation of Innate Immunity Pathways in Human Primary Astrocytes Infected With Chikungunya, Mayaro, Oropouche, and Zika Viruses
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Victor Emmanuel Viana Geddes, Otávio José Bernardes Brustolini, Liliane Tavares de Faria Cavalcante, Filipe Romero Rebello Moreira, Fernando Luz de Castro, Ana Paula de Campos Guimarães, Alexandra Lehmkuhl Gerber, Camila Menezes Figueiredo, Luan Pereira Diniz, Eurico de Arruda Neto, Amilcar Tanuri, Renan Pedra Souza, Iranaia Assunção-Miranda, Soniza Vieira Alves-Leon, Luciana Ferreira Romão, Jorge Paes Barreto Marcondes de Souza, Ana Tereza Ribeiro de Vasconcelos, and Renato Santana de Aguiar
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Chikungunya ,Mayaro ,Oropouche ,Zika ,innate immunity ,astrocytes ,Microbiology ,QR1-502 - Abstract
Arboviruses pose a major threat throughout the world and represent a great burden in tropical countries of South America. Although generally associated with moderate febrile illness, in more severe cases they can lead to neurological outcomes, such as encephalitis, Guillain-Barré syndrome, and Congenital Syndromes. In this context astrocytes play a central role in production of inflammatory cytokines, regulation of extracellular matrix, and control of glutamate driven neurotoxicity in the central nervous system. Here, we presented a comprehensive genome-wide transcriptome analysis of human primary astrocytes infected with Chikungunya, Mayaro, Oropouche, or Zika viruses. Analyses of differentially expressed genes (DEGs), pathway enrichment, and interactomes have shown that Alphaviruses up-regulated genes related to elastic fiber formation and N-glycosylation of glycoproteins, with down-regulation of cell cycle and DNA stability and chromosome maintenance genes. In contrast, Oropouche virus up-regulated cell cycle and DNA maintenance and condensation pathways while down-regulated extracellular matrix, collagen metabolism, glutamate and ion transporters pathways. Zika virus infection only up-regulated eukaryotic translation machinery while down-regulated interferon pathways. Reactome and integration analysis revealed a common signature in down-regulation of innate immune response, antiviral response, and inflammatory cytokines associated to interferon pathway for all arboviruses tested. Validation of interferon stimulated genes by reverse transcriptase quantitative polymerase chain reaction (RT-qPCR) corroborated our transcriptome findings. Altogether, our results showed a co-evolution in the mechanisms involved in the escape of arboviruses to antiviral immune response mediated by the interferon (IFN) pathway.
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- 2021
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27. Who’s afraid of Islamic Feminism, and why? Raising voices through education
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Renan de Souza
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Feminism ,Islamic Feminist Movement ,Patriarchy ,Islamic Feminist Authors ,History of Asia ,DS1-937 ,International relations ,JZ2-6530 - Abstract
The Islamic Feminism is a powerful movement which is shaking the patriarchal structure in the Muslim world, since women have largely granted accesses to education. Even though, the movement is not uniform, and it gathers many different voices even, sometimes, disagreeing of its fundamental goals. The essay states that the reinterpretation of the Quranic message – originated in solid education – by the feminists claiming equality in the society is perceived as a threat by the fundamentalist – and in some cases by members of the Political Islam group – and offers a critique of the mainstream male Islamic discourse, based on some Islamic feminist authors interpretation. Ultimately, the essay finishes presenting the case of Malala Yousafzai as a reference. Furthermore, the essay grounds its analyses juxtaposing various interpretations within this movement and among relevant authors and scholars such as Fatema Mernissi and Amina Wadud. It also presents the discussions from two different angles before stating the conclusion of the research.
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- 2020
28. Delta Variant of SARS-CoV-2 Replacement in Brazil: A National Epidemiologic Surveillance Program
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Joice P. Silva, Aline B. de Lima, Luige B. Alvim, Frederico S. V. Malta, Cristiane P. T. B. Mendonça, Paula L. C. Fonseca, Filipe R. R. Moreira, Daniel C. Queiroz, Jorge G. G. Ferreira, Alessandro C. S. Ferreira, Renan P. Souza, Renato S. Aguiar, and Danielle A. G. Zauli
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SARS-CoV-2 ,variants ,epidemiologic surveillance ,COVID-19 ,transmission ,symptoms ,Microbiology ,QR1-502 - Abstract
Coronavirus disease 2019 (COVID-19) pandemic has caused immeasurable impacts on the health and socioeconomic system. The real-time identification and characterization of new Variants of Concern (VOCs) are critical to comprehend its emergence and spread worldwide. In this sense, we carried out a national epidemiological surveillance program in Brazil from April to October 2021. Genotyping by reverse transcription-quantitative polymerase chain reaction (RT-qPCR) and sequencing were performed to monitor the dynamics and dissemination of VOCs in samples from 15 federative units. Delta VOC was first detected on June 2021 and took sixteen weeks to replace Gamma. To assess the transmissibility potential of Gamma and Delta VOCs, we studied the dynamics of RT-qPCR cycle threshold (Ct) score in the dominance period of each variant. The data suggest that Delta VOC has a higher transmission rate than Gamma VOC. We also compared relevant symptom patterns in individuals infected with both VOCs. The Delta-infected subjects were less likely to have low oxygen saturation or fatigue, altered results on chest computed tomography, and a propensity for altered X-rays. Altogether, we described the replacement of Gamma by Delta, Delta enhanced transmissibility, and differences in symptom presentation.
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- 2022
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29. A PERCEPÇÃO DE DISCENTES SOBRE A FORMAÇÃO DE PROFESSORES NO CONTEXTO DA POLÍTICA DE EXPANSÃO DO ENSINO SUPERIOR
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Renan Arjona Souza and Nádia Maria Pereira Souza
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ensino superior ,formação de professores ,baixada fluminense. ,Education ,Special aspects of education ,LC8-6691 - Abstract
Este artigo analisa o significado social da formação de professores a partir da política de expansão e interiorização do ensino superior implementada à partir do ano de 2003 no Brasil. Para tal, além do levantamento de dados em documentos oficiais federais e institucionais, realizou-se uma pesquisa qualitativa com 39 discentes ingressantes dos primeiros cursos de licenciatura de um Campus Universitário Federal na Baixada Fluminense, região metropolitana do Rio de Janeiro (BR). Para a coleta de dados foi aplicado um questionário semiestruturado o qual foi explorado com base na análise de conteúdo de Bardin (1979). Os resultados da investigação, entre outros aspectos, evidenciava que a implementação do Campus da Universidade na Baixada Fluminense parece estar contribuindo com a mobilidade social e a redução das desigualdades sociais na região, ainda que de forma lenta.
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- 2018
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30. Spinal cord compression due to extramedullary hematopoiesis in beta-thalassemia
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Renan Ramon Souza LOPES, Larissa Soares CARDOSO, and Franz ONISHI
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Published
- 2020
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31. Variation of rs3754689 at lactase gene and inhibitors in admixed Brazilian patients with hemophilia A
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Luciana W. Zuccherato, Silvana M. Elói-Santos, Letícia L. Jardim, Ricardo M. Camelo, Daniel G. Chaves, Renan P. Souza, Edward J. Hollox, and Suely M. Rezende
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Published
- 2019
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32. Epidemic Spread of SARS-CoV-2 Lineage B.1.1.7 in Brazil
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Filipe R. R. Moreira, Diego M. Bonfim, Danielle A. G. Zauli, Joice P. Silva, Aline B. Lima, Frederico S. V. Malta, Alessandro C. S. Ferreira, Victor C. Pardini, Wagner C. S. Magalhães, Daniel C. Queiroz, Rafael M. Souza, Victor E. V. Geddes, Walyson C. Costa, Rennan G. Moreira, Nuno R. Faria, Carolina M. Voloch, Renan P. Souza, and Renato S. Aguiar
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n/a ,Microbiology ,QR1-502 - Abstract
The emergence of diverse lineages harboring mutations with functional significance and potentially enhanced transmissibility imposes an increased difficulty on the containment of the SARS-CoV-2 pandemic [...]
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- 2021
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33. Isolation and selection of plant growth-promoting bacteria associated with sugarcane
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Ariana Alves Rodrigues, Marcus Vinicius Forzani, Renan de Souza Soares, Sergio Tadeu Sibov, and José Daniel Gonçalves Vieira
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Zea mays L. ,Enterobacteriaceae ,Klebsiella ,Enterobacter ,Pantoea ,Agriculture (General) ,S1-972 - Abstract
Microorganisms play a vital role in maintaining soil fertility and plant health. They can act as biofertilizers and increase the resistance to biotic and abiotic stress. This study aimed at isolating and characterizing plant growth-promoting bacteria associated with sugarcane, as well as assessing their ability to promote plant growth. Endophytic bacteria from leaf, stem, root and rhizosphere were isolated from the RB 867515 commercial sugarcane variety and screened for indole acetic acid (IAA) production, ability to solubilize phosphate, fix nitrogen and produce hydrogen cyanide (HCN), ammonia and the enzymes pectinase, cellulase and chitinase. A total of 136 bacteria were isolated, with 83 of them presenting some plant growth mechanism: 47 % phosphate solubilizers, 26 % nitrogen fixers and 57 % producing IAA, 0.7 % HCN and chitinase, 45 % ammonia, 30 % cellulose and 8 % pectinase. The seven best isolates were tested for their ability to promote plant growth in maize. The isolates tested for plant growth promotion belong to the Enterobacteriaceae family and the Klebsiella, Enterobacter and Pantoea genera. Five isolates promoted plant growth in greenhouse experiments, showing potential as biofertilizers.
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- 2016
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34. Genetic association of the PERIOD3 (PER3) Clock gene with extreme obesity
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Luana Reis Miranda, Maria Aparecida Camargos Bicalho, Rayane Benfica Alves, Eduardo de Souza Nicolau, Eitan Friedman, Adauto Versiani Ramos, Luiz De Marco, Pedro G. Azevedo, Patrícia P. Couto, Rafael Longhi, Luciana Bastos-Rodrigues, and Renan P. Souza
- Subjects
Adult ,0301 basic medicine ,Genotype ,Endocrinology, Diabetes and Metabolism ,CLOCK Proteins ,Physiology ,030209 endocrinology & metabolism ,Single-nucleotide polymorphism ,Biology ,Polymorphism, Single Nucleotide ,03 medical and health sciences ,0302 clinical medicine ,Gene Frequency ,medicine ,Humans ,Allele frequency ,Alleles ,Genetic association ,030109 nutrition & dietetics ,Nutrition and Dietetics ,Class III obesity ,Haplotype ,Period Circadian Proteins ,Tag SNP ,medicine.disease ,Obesity ,Circadian Rhythm ,Obesity, Morbid - Abstract
Background Obesity has reached epidemic proportions worldwide, affecting life quality and span. Susceptibility to obesity is partly mediated by genetic differences. Indeed, several genes from the clock gene family have already been shown to be intimately associated with obesity in diverse ethnic groups. In the present study, an association between BMI and the rs707467, rs228697 and rs228729 PER3 (Period Circadian Clock 3) polymorphisms in subjects with class II (BMI ≥ 35.0–39.9 kg/m2) and class III obesity (>40 kg/m2, extreme obesity) were carried out using TaqMan real-time PCR. Overall, 259 Brazilian adults were genotyped, of whom 122 had class II or III obesity (BMI ≥ 35.0 kg/m2) and 137 were controls having normal weight (BMI > 18.5 and Results PER3 tag SNP (rs228729) shows a significant association with extreme obesity (1000 permutation p = 0.03 and p = 0.04), for genotype and allele frequency respectively) and a haplotype among the three assessed SNPs (alleles G/T/A, rs228697, rs228729, and rs707467, respectively, 1000 permutation p = 0.03) was significantly more prevalent in the group with obesity. Conclusion This exploratory association study suggests that PER3 rs228729 may be associated with extreme obesity in Brazilian adults, however, replication is needed.
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- 2021
35. DIVERSIDADE DA FLORA FANEROGÂMICA DE TRÊS MATAS DE GALERIA NO BIOMA CERRADO
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Paulino Bambi, Renan de Souza Rezende, Takumâ Machado Scarponi Cruz, Juan Enrique de Araújo Batista, Fernanda Gabriela Graciano Miranda, Lauana Vieira dos Santos, and José Francisco Gonçalves Júnior
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Biodiversidade ,florí?stica ,heterogeneidade de habitat ,zona ripí?¡ria. ,Plant culture ,SB1-1110 ,Botany ,QK1-989 - Abstract
O objetivo deste estudo foi avaliar a diversidade vegetal de fanerógamas em três matas de galeria no Distrito Federal, Brasil. O estudo foi realizado na Área de Proteção Ambiental Gama-Cabeça de Veado, a partir do levantamento fitossociológico em 12 parcelas paralelas aos córregos das matas de galerias amostradas, totalizando 3600 m2 de área. Foram identificadas 146 espécies, sendo Fabaceae, Myrtaceae e Rubiaceae as famílias mais representativas. Apenas sete espécies ocorreram concomitantemente nas áreas estudadas, indicando elevada diversidade, sobretudo em termos de árvores e arbustos. Os valores de riqueza de espécies e diversidade de Shannon foram maiores no córrego Cabeça-de-Veado (JBB), comparado ao córrego Capetinga (FAL) e Roncador (IBGE), respectivamente. Enquanto que a Dominância Absoluta apresentou maiores valores no córrego Roncador, comparado aos córregos Capetinga e Cabeça-de-Veado, respectivamente. Assim, observamos que a diversidade de espécies está relacionada heterogeneidade ambiental das matas amostradas, as quais estão relacionadas as características edáficas e do regime hidrológico.
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- 2017
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36. Impairment of motor but not anxiety‐like behavior caused by the increase of dopamine during development is sustained in zebrafish larvae at later stages
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Renan P. Souza, Marco Aurélio Romano-Silva, Erika K. Sacramento, Bruno R. Souza, Kevin Augusto Farias de Alvarenga, Beatriz Campos Codo, Ana Carolina Monteiro de Souza Lima, and Daniela V.F. Rosa
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Aging ,medicine.medical_specialty ,animal structures ,Brain development ,Light ,Dopamine ,Motor behavior ,Anxiety ,Motor Activity ,Biology ,03 medical and health sciences ,0302 clinical medicine ,Developmental Neuroscience ,Internal medicine ,medicine ,Zebrafish larvae ,Animals ,Zebrafish ,030304 developmental biology ,0303 health sciences ,Movement Disorders ,Anxiety like ,fungi ,Dopaminergic ,biology.organism_classification ,Endocrinology ,Larva ,embryonic structures ,GABAergic ,Locomotion ,030217 neurology & neurosurgery ,Developmental Biology ,medicine.drug - Abstract
Many neuropsychiatric disorders are associated with both dopaminergic (DAergic) and developmental hypotheses. Since DAergic receptors are expressed in the developing brain, it is possible that alterations in dopamine (DA) signaling may impair brain development and consequent behavior. In our previous study, using a zebrafish model, we showed that an increase of DA during the 3 to 5 days postfertilization (dpf) developmental window (an important window for GABAergic neuronal differentiation) affects the motor behavior of 5 dpf larvae. In this study, we set out to determine whether these behavioral alterations were sustained in larvae at older stages (7 and 14 dpf). To test this hypothesis, we chronically treated zebrafish larvae from 3 to 5 dpf with DA. After washing the drug, we recorded and analyzed the first 5 and 30 min of the motor behavior of 5, 7, and 14 dpf subjects. We analyzed mobile episodes, distance traveled, time mobile, distance traveled per mobile episode, time in movement per mobile episode, and distance traveled per time mobile. We showed, once again, that an increase of DA during the 3 to 5 dpf developmental window reduces the number of movement episodes initiated by 5 dpf larvae. We also detected a decrease of other motor behavior parameters in 5 dpf DA-treated larvae. We observed that these alterations are sustained in the 7 dpf larvae. However, we did not see these general locomotor alterations in the 14 dpf larvae. Moreover, we detected a decrease of distance traveled and an increase of time of locomotion per episode in the first 5 min of behavioral analyses in 14 dpf DA-treated larvae. To test if the alterations in the first 5 min were due to anxiety-like behavior, we used a light/dark preference paradigm. We recorded 5dpf, 7dpf, and 14dpf larvae for 5 min and analyzed time of freezing, preference for light or dark, number of entries to the dark, percentage of time in the light. We observed that 5dpf larvae treated with DA showed more freezing, less passages to the dark, and more time spent in the light as compared to their control counterparts. But 7dpf and 14dpf larvae did not show these alterations. Taken overall, therefore, our results suggest that DA does play a role in the development of zebrafish motor behavior, and, furthermore, that some behaviors are more sensitive than others to the effects of DAergic imbalances during development.
- Published
- 2020
37. Report 46: Factors driving extensive spatial and temporal fluctuations in COVID-19 fatality rates in Brazilian hospitals
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Otavio T. Ranzani, Bruce Walker Nelson, Marcia C. Castro, D. M. Bonfim, Renan P. Souza, Nuno R. Faria, Samir Bhatt, Ester Cerdeira Sabino, A. A. de Souza Santos, Carlos A. Prete, Oliver Ratmann, Xiaoyue Xi, S. F. Costa, Paula Luize Camargos Fonseca, Leonardo Soares Bastos, Ricardo P Schnekenberg, Lewis F Buss, L. M. S. Servo, Victor Emmanuel Viana Geddes, R. Sonnabend, Philippe Lemey, Seth Flaxman, Xenia Miscouridou, Darlan da Silva Candido, A. Brizzi, Bernardo Gutierrez, Renato Santana Aguiar, Alexandra Blenkinsop, W. M. de Souza, Charles Whittaker, Thomas A. Mellan, Elizaveta Semenova, Iwona Hawryluk, Melodie Monod, Rafael Henrique Moraes Pereira, A. S. Levin, Leonardo José Tadeu de Araújo, Christopher Dye, Julio Croda, Filipe Romero Rebello Moreira, and Sharmistha Mishra
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education.field_of_study ,Coronavirus disease 2019 (COVID-19) ,business.industry ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Pandemic preparedness ,Population ,Economic shortage ,Article ,Geography ,Case fatality rate ,Health care ,Pandemic ,business ,education ,Demography - Abstract
The SARS-CoV-2 Gamma variant spread rapidly across Brazil, causing substantial infection and death waves. We use individual-level patient records following hospitalisation with suspected or confirmed COVID-19 to document the extensive shocks in hospital fatality rates that followed Gamma’s spread across 14 state capitals, and in which more than half of hospitalised patients died over sustained time periods. We show that extensive fluctuations in COVID-19 in-hospital fatality rates also existed prior to Gamma’s detection, and were largely transient after Gamma’s detection, subsiding with hospital demand. Using a Bayesian fatality rate model, we find that the geographic and temporal fluctuations in Brazil’s COVID-19 in-hospital fatality rates are primarily associated with geographic inequities and shortages in healthcare capacity. We project that approximately half of Brazil’s COVID-19 deaths in hospitals could have been avoided without pre-pandemic geographic inequities and without pandemic healthcare pressure. Our results suggest that investments in healthcare resources, healthcare optimization, and pandemic preparedness are critical to minimize population wide mortality and morbidity caused by highly transmissible and deadly pathogens such as SARS-CoV-2, especially in low- and middle-income countries., One sentence summary COVID-19 in-hospital fatality rates fluctuate dramatically in Brazil, and these fluctuations are primarily associated with geographic inequities and shortages in healthcare capacity.
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- 2021
38. Systematic review of host genetic association with Covid‐19 prognosis and susceptibility: What have we learned in 2020?
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Diego Menezes, Luciana de Lima Ferreira, Julia Maria Saraiva-Duarte, Renan P. Souza, João Locke Ferreira de Araújo, and Renato Santana Aguiar
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Candidate gene ,genetic association ,Locus (genetics) ,Genome-wide association study ,Review ,Human leukocyte antigen ,Disease ,Bioinformatics ,SARS‐CoV‐2 ,susceptibility ,Virology ,ABO blood group system ,Humans ,Medicine ,Exome sequencing ,Genetic association ,Covid‐19 ,SARS-CoV-2 ,business.industry ,Interleukins ,COVID-19 ,Membrane Proteins ,RNA-Binding Proteins ,Prognosis ,candidate genetic variants ,Infectious Diseases ,polymorphisms ,business - Abstract
Summary Biomarker identification may provide strategic opportunities to understand disease pathophysiology, predict outcomes, improve human health, and reduce healthcare costs. The highly heterogeneous Covid‐19 clinical manifestation suggests a complex interaction of several different human, viral and environmental factors. Here, we systematically reviewed genetic association studies evaluating Covid‐19 severity or susceptibility to SARS‐CoV‐2 infection following PRISMA recommendations. Our research comprised papers published until December 31st, 2020, in PubMed and BioRXiv databases focusing on genetic association studies with Covid‐19 prognosis or susceptibility. We found 20 eligible genetic association studies, of which 11 assessed Covid‐19 outcome and 14 evaluated infection susceptibility (five analyzed both effects). Q‐genie assessment indicated moderate quality. Five large‐scale association studies (GWAS, whole‐genome, or exome sequencing) were reported with no consistent replication to date. Promising hits were found on the 3p21.31 region and ABO locus. Candidate gene studies examined ACE1, ACE2, TMPRSS2, IFITM3, APOE, Furin, IFNL3, IFNL4, HLA, TNF‐ɑ genes, and ABO system. The most evaluated single locus was the ABO, and the most sampled region was the HLA with three and five candidate gene studies, respectively. Meta‐analysis could not be performed. Available data showed the need for further reports to replicate claimed associations.
- Published
- 2021
39. Blockade of Interleukin Seventeen (IL-17A) with Secukinumab in Hospitalized COVID-19 patients – the BISHOP study
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Roberto Tunala, Mauro M. Teixeira, Argenil Jose Assis de Oliveira, Henrique Cerqueira Guimaraes, Alessandra Dias Costa e Silva, Júlio Sílvio de Souza Bueno Filho, Denise Souza, Renan P. Souza, Isabella Gomes, Antonio Tolentino Nogueira de Sa, Samara Quadros Lobe, Gustavo Gomes Resende, Renato S. Aguiar, Ricardo da Cruz Lage, Francisco Forestiero, and Amanda Fonseca Medeiros
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Adult ,Male ,Microbiology (medical) ,medicine.medical_specialty ,Antibodies, Monoclonal, Humanized ,Group B ,law.invention ,Randomized controlled trial ,law ,Internal medicine ,Clinical endpoint ,Humans ,Medicine ,Adverse effect ,General Immunology and Microbiology ,business.industry ,Interleukin-17 ,Acute kidney injury ,General Medicine ,medicine.disease ,Intensive care unit ,COVID-19 Drug Treatment ,Hospitalization ,Treatment Outcome ,Infectious Diseases ,Secukinumab ,business ,Viral load - Abstract
BackgroundPatients with severe COVID-19 seem to have a compromised antiviral response and hyperinflammation. Neutrophils are critical players in COVID-19 pathogenesis. IL-17A plays a major role in protection against extracellular pathogens and neutrophil attraction and activation. We hypothesized that secukinumab, an anti-IL17A monoclonal antibody, could mitigate the deleterious hyperinflammation in COVID-19.MethodsBISHOP was an open-label, single-center, phase-II controlled trial. Fifty adults hospitalized Covid-19 patients, confirmed by a positive SARS-CoV-2 RT-PCR, were randomized 1:1 to receive 300mg of secukinumab subcutaneously at day-0 (group A) plus standard of care (SoC: antiviral drugs, antimicrobials, corticosteroids, and/or anticoagulants) or SoC alone (group B). A second dose of 300mg of secukinumab could be administered on day-7, according to staff judgment. The primary endpoint was ventilator-free days at day-28 (VFD-28). Secondary efficacy and safety outcomes were also explored.FindingsAn intention-to-treat analysis showed no difference in VFD-28: 23.7 (95%CI 19.6-27.8) in group A vs. 23.8 (19.9-27.6) in group B, p=0.62; There was also no difference in hospitalization time, intensive care unit demand, the incidence of circulatory shock, acute kidney injury, fungal or bacterial co-infections, and severe adverse events. Pulmonary thromboembolism was less frequent in group A (4.2% vs. 26.2% p=0.04). There was one death in each group. Viral clearance, defined by the viral load fold change (2-ΔΔCT) in upper airways, between day-0 and day-7, was also similar: 0.17 (0.05-0.56) in group A vs. 0.24 (0.10-0.57) in group B.InterpretationThe efficacy of secukinumab in the treatment of Covid19 was not demonstrated. No difference between groups in adverse events and no unexpected events were observed.FundingNovartis Brazil supported this research providing expert input in the development of the project, drug supply, data management, and monitoring.
- Published
- 2021
40. Cannabinoid receptor gene polymorphisms and cognitive performance in patients with schizophrenia and controls
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Rafael Rodrigo dos Santos, Bruna Panizzutti, Antônio Lúcio Teixeira, Clarissa S. Gama, Rodrigo Ferretjans, Salvina Maria de Campos-Carli, Pâmela Ferrari, Fernanda Guimarães, João Vinícius Salgado, Lucas M. Mantovani, and Renan P. Souza
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Cannabinoid receptor ,RC435-571 ,Neuropsychological Tests ,Bioinformatics ,Receptor, Cannabinoid, CB2 ,cannabinoids ,Cognition ,Receptor, Cannabinoid, CB1 ,cognitive dysfunction ,Medicine ,Verbal fluency test ,Humans ,Effects of sleep deprivation on cognitive performance ,endocannabinoids ,Genetic association ,Psychiatry ,Polymorphism, Genetic ,CNR1 ,business.industry ,CNR2 ,medicine.disease ,Endocannabinoid system ,Psychiatry and Mental health ,Schizophrenia ,Case-Control Studies ,business ,Neurocognitive - Abstract
Objective: To test the hypothesis that genetic variations of cannabinoid receptors contribute to the pathophysiology of cognitive deficits in schizophrenia. Methods: In this genetic association case-control study, cannabinoid receptor polymorphisms CNR1 rs12720071 and CNR2 rs2229579 were tested for association with neurocognitive performance in 69 patients with schizophrenia and 45 healthy controls. Neurocognition was assessed by the Brief Assessment of Cognition in Schizophrenia (BACS). Results: We found a consistent association between CNR1 rs12720071 polymorphism and the cognitive performance of patients in several cognitive domains. Patients with C/C polymorphism presented significantly worse performance in motor speed, verbal fluency, attention/processing speed and reasoning/problem solving. Conclusion: Although limited, our data support the hypothesis that CNR1 variations may be associated with the pathogenesis of cognitive deficits of schizophrenia.
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- 2021
41. Ethyl acetate fractions of Myrciaria floribunda, Ocotea pulchella, and Ocotea notataexhibit promising in vitro activity against Sporothrix brasiliensisisolates with low susceptibility to itraconazole
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de Souza, Lais Cavalcanti dos Santos Velasco, Reis, Nathália Faria, Alcântara, Lucas Martins, da Silveira Souto, Simone Rocha Leal, de Araújo Penna, Bruno, Santos, Renan Caetano Souza, Robbs, Bruno Kaufmann, Machado, Francisco Paiva, Castro, Helena Carla, Machado, Ricardo Luiz Dantas, Rocha, Leandro, and de Souza Baptista, Andréa Regina
- Abstract
Sporothrix brasiliensiswith low susceptibility isolates were described from the Brazilian zoonotic sporotrichosis hyperendemics. The aim of this work was to evaluate distinct fractions of Ocotea pulchella, Ocotea notata, Myrciaria floribunda, and Hypericum brasilienseplant extracts against itraconazole-sensitive and low susceptibility S. brasiliensisisolates. Crude extracts were tested against clinical isolates and the ATCC MYA4823 to determine the minimum inhibitory concentrations (MICs) and fungicidal or fungistatic activities (MFC). A high MICs and MFCs amplitude (1 – > 128 µg/mL) were obtained for seven extracts. The highest antimicrobial activities against sensitive S. brasiliensiswere displayed by the ethyl acetate extracts of O. notata(MIC = 2–128 μg/mL) and M. floribunda(MIC = 1–8 μg/mL). A fungicidal effect was observed for all fraction extracts. Ocoteaspp. and M. floribundaethyl acetate extracts provide promising profiles against itraconazole-sensitive or low susceptibility S. brasiliensis. Future studies will determine if these extracts can contribute as alternative therapies to this neglected zoonosis.
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- 2023
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42. Non-genetic factors and polymorphisms in genes CYP2C9 and VKORC1: predictive algorithms for TTR in Brazilian patients on warfarin
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Emílio Itamar de Freitas Campos, Edna Afonso Reis, Daniel Dias Ribeiro, Marcus Fernando da Silva Praxedes, Renan P. Souza, Maria Auxiliadora Parreiras Martins, Manoel Otávio da Costa Rocha, Karina Braga Gomes, and Aline Mansueto Mourão
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Male ,endocrine system ,medicine.medical_specialty ,Time Factors ,Administration, Oral ,Sensitivity and Specificity ,030226 pharmacology & pharmacy ,Cohort Studies ,03 medical and health sciences ,0302 clinical medicine ,Polymorphism (computer science) ,Vitamin K Epoxide Reductases ,Internal medicine ,Genotype ,medicine ,Humans ,Pharmacology (medical) ,International Normalized Ratio ,030212 general & internal medicine ,CYP2C9 ,Aged ,Cytochrome P-450 CYP2C9 ,Retrospective Studies ,Pharmacology ,Polymorphism, Genetic ,biology ,business.industry ,Warfarin ,Anticoagulants ,nutritional and metabolic diseases ,On warfarin ,Retrospective cohort study ,General Medicine ,Middle Aged ,Transthyretin ,biology.protein ,Female ,VKORC1 ,business ,Algorithms ,Brazil ,medicine.drug - Abstract
This study was designed to evaluate the association of non-genetic factors and polymorphisms CYP2C9*2 (rs1799853), CYP2C9*3 (rs1075910), and VKORC1-G1639A (rs9923231) with time in therapeutic range (TTR), and to build a regression model to predict the quality of oral anticoagulation control in a sample of Brazilian patients. This is a retrospective cohort study developed at an anticoagulation clinic of a university hospital. Overall, 312 patients were included. The quality of oral anticoagulation control was evaluated by TTR. TTR was dichotomized for analysis, using two cutoff points for classification as inadequate (TTR ≤ 60.0%) and optimal (TTR ≥ 75.0%) control. The average age was 60.4 ± 13.5 years, with a predominance of women (187; 59.9%). The -G1639A polymorphism of the VKORC1 gene, when evaluated, based on the recessive inheritance pattern [AA × (GA + GG)], patients with AA genotype exhibited a higher TTR (68.2% versus 62.8%, p = 0.017). TTR ≤ 60.0% was associated with number of drugs in chronic use, assistance for warfarin administration, reports of not taking warfarin, absenteeism, sex (female), and target INR (International Normalized Ratio; 2.00–3.00). TTR ≥ 75.0% was associated with sex (male), target INR (2.00–3.00), assistance for warfarin administration, reports of not taking warfarin, and absenteeism. The two algorithms proposed showed adequate ability to predict TTR presenting good sensitivity and specificity. Our findings provided useful information for risk stratification depending on TTR level and for future investigations on the quality of oral anticoagulation control in Brazilian anticoagulation clinics.
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- 2019
43. Author Correction: Spatial and temporal fluctuations in COVID-19 fatality rates in Brazilian hospitals
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Andrea Brizzi, Charles Whittaker, Luciana M. S. Servo, Iwona Hawryluk, Carlos A. Prete, William M. de Souza, Renato S. Aguiar, Leonardo J. T. Araujo, Leonardo S. Bastos, Alexandra Blenkinsop, Lewis F. Buss, Darlan Candido, Marcia C. Castro, Silvia F. Costa, Julio Croda, Andreza Aruska de Souza Santos, Christopher Dye, Seth Flaxman, Paula L. C. Fonseca, Victor E. V. Geddes, Bernardo Gutierrez, Philippe Lemey, Anna S. Levin, Thomas Mellan, Diego M. Bonfim, Xenia Miscouridou, Swapnil Mishra, Mélodie Monod, Filipe R. R. Moreira, Bruce Nelson, Rafael H. M. Pereira, Otavio Ranzani, Ricardo P. Schnekenberg, Elizaveta Semenova, Raphael Sonabend, Renan P. Souza, Xiaoyue Xi, Ester C. Sabino, Nuno R. Faria, Samir Bhatt, and Oliver Ratmann
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General Medicine ,General Biochemistry, Genetics and Molecular Biology - Abstract
Correction to: Nature Medicine https://doi.org/10.1038/s41591-022-01807-1, published online 10 May 2022.
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- 2022
44. Epidemic Spread of SARS-CoV-2 Lineage B.1.1.7 in Brazil
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Wagner C. S. Magalhães, Rafael Morais de Souza, Renan P. Souza, Walyson Coelho Costa, Joice do P. Silva, Daniel Costa Queiroz, Nuno R. Faria, Carolina M. Voloch, Alessandro C. S. Ferreira, Rennan G. Moreira, Danielle A G Zauli, Victor Emmanuel Viana Geddes, Victor Cavalcanti Pardini, Diego M Bonfim, Renato Santana Aguiar, Frederico S V Malta, Filipe R. R. Moreira, Aline B. de Lima, Medical Research Council-São Paulo Research Foundation (FAPESP), and Wellcome Trust
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0301 basic medicine ,2019-20 coronavirus outbreak ,Lineage (genetic) ,Coronavirus disease 2019 (COVID-19) ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,030106 microbiology ,Genome, Viral ,Biology ,Microbiology ,03 medical and health sciences ,Virology ,Epidemic spread ,Pandemic ,Humans ,skin and connective tissue diseases ,Phylogeny ,Science & Technology ,SARS-CoV-2 ,fungi ,COVID-19 ,respiratory system ,QR1-502 ,Transmissibility (vibration) ,body regions ,Phylogeography ,n/a ,030104 developmental biology ,Infectious Diseases ,Editorial ,Mutation ,Functional significance ,Life Sciences & Biomedicine ,human activities ,Brazil ,0605 Microbiology - Abstract
The emergence of diverse lineages harboring mutations with functional significance and potentially enhanced transmissibility imposes an increased difficulty on the containment of the SARS-CoV-2 pandemic [...]
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- 2021
45. Common Dysregulation of Innate Immunity Pathways in Human Primary Astrocytes Infected With Chikungunya, Mayaro, Oropouche, and Zika Viruses
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Fernando Luz de Castro, Soniza Vieira Alves-Leon, Filipe Romero Rebello Moreira, Jorge Marcondes de Souza, Ana Paula de C Guimarães, Renato S. Aguiar, Alexandra L. Gerber, Luan Pereira Diniz, Camila Menezes Figueiredo, Otávio J. B. Brustolini, Luciana Romão, Liliane T. F. Cavalcante, Iranaia Assunção-Miranda, Amilcar Tanuri, Eurico de Arruda Neto, Renan P. Souza, Victor Emmanuel Viana Geddes, and Ana Tereza Ribeiro de Vasconcelos
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0301 basic medicine ,Microbiology (medical) ,Immunology ,lcsh:QR1-502 ,Mayaro ,medicine.disease_cause ,Microbiology ,lcsh:Microbiology ,Zika virus ,Transcriptome ,03 medical and health sciences ,Cellular and Infection Microbiology ,Zika ,0302 clinical medicine ,Immune system ,Interferon ,medicine ,Humans ,Chikungunya ,innate immunity ,Original Research ,Innate immune system ,biology ,Zika Virus Infection ,Oropouche virus ,astrocytes ,Zika Virus ,biology.organism_classification ,Virology ,Immunity, Innate ,Reverse transcriptase ,Oropouche ,030104 developmental biology ,Infectious Diseases ,Chikungunya Fever ,030217 neurology & neurosurgery ,medicine.drug - Abstract
Arboviruses pose a major threat throughout the world and represent a great burden in tropical countries of South America. Although generally associated with moderate febrile illness, in more severe cases they can lead to neurological outcomes, such as encephalitis, Guillain-Barré syndrome, and Congenital Syndromes. In this context astrocytes play a central role in production of inflammatory cytokines, regulation of extracellular matrix, and control of glutamate driven neurotoxicity in the central nervous system. Here, we presented a comprehensive genome-wide transcriptome analysis of human primary astrocytes infected with Chikungunya, Mayaro, Oropouche, or Zika viruses. Analyses of differentially expressed genes (DEGs), pathway enrichment, and interactomes have shown that Alphaviruses up-regulated genes related to elastic fiber formation and N-glycosylation of glycoproteins, with down-regulation of cell cycle and DNA stability and chromosome maintenance genes. In contrast, Oropouche virus up-regulated cell cycle and DNA maintenance and condensation pathways while down-regulated extracellular matrix, collagen metabolism, glutamate and ion transporters pathways. Zika virus infection only up-regulated eukaryotic translation machinery while down-regulated interferon pathways. Reactome and integration analysis revealed a common signature in down-regulation of innate immune response, antiviral response, and inflammatory cytokines associated to interferon pathway for all arboviruses tested. Validation of interferon stimulated genes by reverse transcriptase quantitative polymerase chain reaction (RT-qPCR) corroborated our transcriptome findings. Altogether, our results showed a co-evolution in the mechanisms involved in the escape of arboviruses to antiviral immune response mediated by the interferon (IFN) pathway.
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- 2021
46. Biosafety in Dental Health Care During Covid-19 Pandemic: A Longitudinal Study
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Diego Rodrigues de Aguilar, Tarcília Aparecida Silva, Paula Luize Camargos Fonseca, Lucyene Miguita, Daniel Costa Queiroz, Raphaela Alvarenga Braga de Freitas, Rafael Marques de Souza, Larissa Marques Bemquerer, Renato Santana Aguiar, Rennan Garcias Moreira, Victor Emmanuel Viana Geddes, Francisca Daniele Jardilino Silami, Renan P. Souza, Mauro Henrique Nogueira Guima de Abreu, Sara Ferreira Dos Santos Costa, Diego Menezes, Carolina Cavaliéri Gomes, Leandro Napier de Souza, Maria Elisa de Souza e Silva, Aline Fernanda Cruz, Ricardo Santiago Gomez, Hugo José Alves, Suellen da Rocha Mendes, Aline Araujo Sampaio, Roberta Rayra Martins-Chaves, and Filipe Romero Rebello Moreira
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History ,Longitudinal study ,medicine.medical_specialty ,Polymers and Plastics ,business.industry ,Dental Assistant ,Declaration ,Industrial and Manufacturing Engineering ,Test (assessment) ,Biosafety ,Dental Staff ,Family medicine ,Pandemic ,Health care ,medicine ,Business and International Management ,business - Abstract
Background: The COVID-19 pandemic highly impacted dental healthcare assistance owing to concerns about the risk of transmission by contaminant fluids, droplet formation during dental practice, drastically reducing the number of dental procedures worldwide. This longitudinal study was conducted to monitor SARS-CoV-2 contamination in dental clinics during activities return of students at university. Methods: We evaluated the presence of SARS-CoV-2 RNA by RT-PCR in a dental school clinic environment, on professors, undergraduate dental students, dental assistants, and patients from January 11th to March 12th, 2021 (9 weeks). Serological testing was performed on dental healthcare personnel (DHCP) during the first and last weeks. Additionally, samples with low Ct values were sequenced to identify circulating SARS-CoV-2 variants and possible transmission clusters. Findings: A low number of dental staff (5·8%), patients (0·9%), and environmental sites (0·8%) tested positive for SARS-CoV-2. Most positive cases were asymptomatic to mildly symptomatic, and two asymptomatic DHCP tested positive in longitudinal follow-up RT-PCR test. Previous exposition to COVID-19 were found in 16·2% of the DHCP that showed IgM or IgG antibodies against SARS-CoV-2, and 1/3 of them had undetected antibodies in the last week. Variant Zeta (P.2) were detected. No cross-infection was observed among the participants. Interpretation: Our study suggests that dental practice can be executed safely when control measures and biosafety protocols are applied adequately. DHCP and patient testing, telemonitoring, proper use of personal protection equipment, and surface sanitisation are essential to avoid SARS-CoV-2 cross-infection in dental practice. Funding Information: UFMG/RTR/PRPq, FAPEMIG, CNPq, CAPES/MEC, FINEP, and Rede Corona-omica BR MCTI/FINEP affiliated to RedeVirus/MCTI. Declaration of Interests: All authors declare to have no conflict of interests. Ethics Approval Statement: The present study was approved by the Ethics Committee of Universidade Federal de Minas Gerais (UFMG) (Protocol no31041720.3.0000.5149) (https://plataformabrasil.saude.gov.br/login.jsf). All participants enrolled in this study were volunteers, and their samples and clinical data were collected only via signed consent forms.
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- 2021
47. Dengue virus infection induces inflammation and oxidative stress on the heart
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Vivian Vasconcelos Costa, Marcos B. Melo, Natália Nóbrega, Daniella Bonaventura, Lucas M. Kangussu, Celso Martins Queiroz-Junior, Mauro M. Teixeira, Milene Alvarenga Rachid, Carlos R. Tirapelli, Antonio Nei Santana Gondim, Renan P. Souza, Daniela Reis, Robson A.S. Santos, Danielle G. Souza, Natália Costa Araújo, Jader S. Cruz, and Vania C. Olivon
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Male ,Cardiac output ,Myocarditis ,Inflammation ,Dengue virus ,Systemic inflammation ,medicine.disease_cause ,Dengue ,03 medical and health sciences ,Mice ,medicine ,Animals ,Humans ,030304 developmental biology ,0303 health sciences ,Mice, Inbred BALB C ,030306 microbiology ,business.industry ,Dengue Virus ,medicine.disease ,Oxidative Stress ,Blood pressure ,Heart failure ,Immunology ,medicine.symptom ,Cardiology and Cardiovascular Medicine ,business ,PERICARDITE ,Oxidative stress - Abstract
ObjectiveDengue fever is one of the most important arboviral diseases in the world, and its severe forms are characterised by a broad spectrum of systemic and cardiovascular hallmarks. However, much remains to be elucidated regarding the pathogenesis triggered by Dengue virus (DENV) in the heart. Herein, we evaluated the cardiac outcomes unleashed by DENV infection and the possible mechanisms associated with these effects.MethodsA model of an adapted DENV-3 strain was used to infect male BALB/c mice to assess haemodynamic measurements and the functional, electrophysiological, inflammatory and oxidative parameters in the heart.ResultsDENV-3 infection resulted in increased systemic inflammation and vascular permeability with consequent reduction of systolic blood pressure and increase in heart rate. These changes were accompanied by a decrease in the cardiac output and stroke volume, with a reduction trend in the left ventricular end-systolic and end-diastolic diameters and volumes. Also, there was a reduction trend in the calcium current density in the ventricular cardiomyocytes of DENV-3 infected mice. Indeed, DENV-3 infection led to leucocyte infiltration and production of inflammatory mediators in the heart, causing pericarditis and myocarditis. Moreover, increased reactive oxygen species generation and lipoperoxidation were also verified in the cardiac tissue of DENV-3 infected mice.ConclusionsDENV-3 infection induced a marked cardiac dysfunction, which may be associated with inflammation, oxidative stress and electrophysiological changes in the heart. These findings provide new cardiac insights into the mechanisms involved in the pathogenesis triggered by DENV, contributing to the research of new therapeutic targets for clinical practice.
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- 2020
48. Prevalence of bacterial pathogens and potential role in COVID-19 severity in patients admitted to intensive care units in Brazil
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Renata Eliane de Ávila, Ana Tereza Ribeiro de Vasconcelos, Tailah Bernardo de Almeida, Fabíola Marques de Carvalho, Shana Priscila Coutinho Barroso, Luciane Prioli Ciapina, Mauro M. Teixeira, Leandro Nascimento Lemos, Jheimson Silva Lima, Renato Santana Aguiar, Virginia Antunes de Andrade Zambelli, Renan P. Souza, Tatiani Oliveira Fereguetti, Ana Paula de C Guimarães, Alexandra L. Gerber, Cynthia Chester Cardoso, and Rennan Garcias Moreira
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Mechanical ventilation ,Immune system ,Coronavirus disease 2019 (COVID-19) ,business.industry ,Intensive care ,medicine.medical_treatment ,Medicine ,Virulence ,Colonization ,Risk factor ,Lung injury ,business ,Microbiology - Abstract
Secondary bacterial and fungal infections are associated with respiratory viral infections and invasive mechanical ventilation. In Coronavirus disease 2019 (COVID-19), lung injury by SARS-CoV-2 and impaired immune response can provide a favorable environment for microorganism growth and colonization in hospitalized individuals. Recent studies suggest that secondary bacterial pneumonia is a risk factor associated with COVID-19. In Brazil, knowledge about microbiota present in COVID-19 patients is incipient. This work describes the microbiota of 21 COVID-19 patients admitted to intensive care units from two Brazilian centers. We identified respiratory, nosocomial and bacterial pathogens as prevalent microorganisms. Other bacterial opportunistic and commensal species are also represented. Virulence factors of these pathogenic species, metabolic pathways used to evade and modulate immunological processes and the interconnection between bacterial presence and virulence in COVID-19 progression are discussed.Article Summary LineWe identified respiratory, nosocomial and bacterial pathogens as prevalent microorganisms in 21 Brazilian COVID-19 patients admitted to Intensive Care Units. Pathogen virulence factors and immune response evasion metabolic pathways are correlated to COVID-19 severity.
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- 2020
49. O conceito de relações de ensino: elaboração conceitual entre licenciandos em química
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Joana de Jesus de Andrade, Renan de Souza Moser, Daniela Gonçalves de Abreu, and Thiago Bernardo Cavassani
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Formação inicial de professores ,Relações de ensino ,Estágio docente ,Education (General) ,L7-991 ,Theory and practice of education ,LB5-3640 ,Special aspects of education ,LC8-6691 ,History of education ,LA5-2396 - Abstract
Neste texto apresentamos alguns resultados do projeto de pesquisa Epistemologia e Psicologia em Educação: aprofundamentos acerca dos processos de elaboração conceitual entre licenciandos em Química. Por meio de entrevistas semiestruturadas com alunos do 5º ano de um curso de Licenciatura em Química de uma universidade pública brasileira investigou-se os processos de elaboração conceitual do termo Relações de Ensino. As entrevistas foram gravadas, transcritas e analisadas com base na abordagem da Psicologia Histórico-Cultural. Neste trabalho apresentamos alguns excertos selecionados a partir dos discursos de três alunos. Concluímos que os processos de elaboração são ressiginificados ao longo da carreira docente; são construídas e transformadas de acordo com a história pregressa e; o esforço de entender como ocorrem as relações de ensino passa pelo espaço institucionalizado da escola que demarca discursos, comportamentos e identidades docentes.
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- 2013
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50. Evolution and epidemic spread of SARS-CoV-2 in Brazil
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Marcílio Jorge Fumagalli, Camila A. M. Silva, Átila Duque Rossi, Mauro M. Teixeira, Chieh-Hsi Wu, William Marciel de Souza, Pedro S. Peixoto, Carlos A. Prete, Thomas A. Mellan, Angelica Zaninelli Schreiber, Renan P. Souza, Samir Bhatt, Rennan G. Moreira, Jaqueline Goes de Jesus, Josy Hubner, Mandev S. Gill, Philippe Lemey, Mauricio W. Perroud, Celso Francisco Hernandes Granato, Andrei C. Sposito, Patricia Asfora Falabella Leme, Nicholas J. Loman, Giulia M. Ferreira, Julien Thézé, José Luiz Proença-Módena, Mariane Talon de Menezes, Fabiana Granja, Louis du Plessis, Márcia Teixeira Garcia, Darlan da Silva Candido, Sarah C. Hill, Ronaldo da Silva Francisco, Luiz Carlos de Almeida, Rafael Henrique Moraes Pereira, Nelson Gaburo, Lewis F Buss, Mariana S. Ramundo, Ana Tereza Ribeiro de Vasconcelos, Magnun N. N. Santos, Ester Cerdeira Sabino, Samuel M. Nicholls, Andreza Aruska de Souza Santos, Luiz Max Carvalho, Oliver J. Brady, Carolina S. Lazari, Luciana C. Resende-Moreira, Ingra Morales Claro, José Eduardo Levi, Oliver G. Pybus, Flavia C. S. Sales, Camila Zolini de Sá, Cristiano Xavier Lima, Amilcar Tanuri, Neil M. Ferguson, Helder I. Nakaya, Swapnil Mishra, Henrique Hoeltgebaum, Maria Luiza Moretti, Simon Dellicour, Thais M. Coletti, Alessandro C. S. Ferreira, Jordan Ashworth, Cecila Salete Alencar, Silvia Figueiredo Costa, Carlos Kaue Vieira Braga, Carolina M. Voloch, Renato Santana Aguiar, Ana Paula de C Guimarães, Andrew Rambaut, Alexandra L. Gerber, Nuno R. Faria, Filipe R. R. Moreira, Maurício Lacerda Nogueira, Camila L. Simeoni, Terezinha M. P. P. Castineiras, Erika R. Manuli, Mariene R. Amorim, Julia Forato, Université libre de Bruxelles (ULB), University of Oxford [Oxford], Laboratorio Nacional de Computação Cientifica [Rio de Janeiro] (LNCC / MCT), Unité Mixte de Recherche d'Épidémiologie des maladies Animales et zoonotiques (UMR EPIA), VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven), Yerkes National Primate Research Center [Lawrenceville, GA], Emory University [Atlanta, GA], Comissão de Coordenação e Desenvolvimento Regional do Alentejo, Universidade de São Paulo (USP), University of Campinas [Campinas] (UNICAMP), IBM Research - Brazil, IBM Brazil, Instituto de Ciencias Biologicas [Minas Gerais], Universidade Federal de Minas Gerais [Belo Horizonte] (UFMG), University of London, Rega Institute for Medical Research [Leuven, België], University of Southampton, University of Edinburgh, University of Birmingham [Birmingham], Wellcome Trust, and Medical Research Council-São Paulo Research Foundation (FAPESP)
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0301 basic medicine ,Urban Population ,Virus transmission ,Epidemiology ,[SDV]Life Sciences [q-bio] ,Basic Reproduction Number ,CORONAVIRUS ,law.invention ,0302 clinical medicine ,COVID-19 Testing ,law ,Socioeconomics ,Clade ,Phylogeny ,[SDV.MHEP.ME]Life Sciences [q-bio]/Human health and pathology/Emerging diseases ,Travel ,Multidisciplinary ,biology ,3. Good health ,Multidisciplinary Sciences ,Europe ,Phylogeography ,Transmission (mechanics) ,Geography ,Science & Technology - Other Topics ,ACCURATE ,Coronavirus Infections ,Brazil ,General Science & Technology ,Evolution ,Genomic data ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,030231 tropical medicine ,Pneumonia, Viral ,Genome, Viral ,Evolution, Molecular ,03 medical and health sciences ,Betacoronavirus ,Spatio-Temporal Analysis ,Brazil-UK Centre for Arbovirus Discovery, Diagnosis, Genomics and Epidemiology (CADDE) Genomic Network ,Report ,Epidemic spread ,Humans ,Cities ,Pandemics ,Air travel ,Science & Technology ,Models, Statistical ,Models, Genetic ,Clinical Laboratory Techniques ,SARS-CoV-2 ,COVID-19 ,Bayes Theorem ,biology.organism_classification ,030104 developmental biology ,Basic reproduction number ,Demography ,Reports - Abstract
Brazil currently has one of the fastest growing SARS-CoV-2 epidemics in the world. Due to limited available data, assessments of the impact of non-pharmaceutical interventions (NPIs) on virus transmission and epidemic spread remain challenging. We investigate the impact of NPIs in Brazil using epidemiological, mobility and genomic data. Mobility-driven transmission models for São Paulo and Rio de Janeiro cities show that the reproduction number (Rt) reached below 1 following NPIs but slowly increased to values between 1 to 1.3 (1.0–1.6). Genome sequencing of 427 new genomes and analysis of a geographically representative genomic dataset from 21 of the 27 Brazilian states identified >100 international introductions of SARS-CoV-2 in Brazil. We estimate that three clades introduced from Europe emerged between 22 and 27 February 2020, and were already well-established before the implementation of NPIs and travel bans. During this first phase of the epidemic establishment of SARS-CoV-2 in Brazil, we find that the virus spread mostly locally and within-state borders. Despite sharp decreases in national air travel during this period, we detected a 25% increase in the average distance travelled by air passengers during this time period. This coincided with the spread of SARS-CoV-2 from large urban centers to the rest of the country. In conclusion, our results shed light on the role of large and highly connected populated centres in the rapid ignition and establishment of SARS-CoV-2, and provide evidence that current interventions remain insufficient to keep virus transmission under control in Brazil.One Sentence SummaryJoint analysis of genomic, mobility and epidemiological novel data provide unique insight into the spread and transmission of the rapidly evolving epidemic of SARS-CoV-2 in Brazil.
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- 2020
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