68 results on '"R. Dhamodharan"'
Search Results
2. 3-({[(1-Phenylethyl)sulfanyl]methanethioyl}sulfanyl)propanoic acid
- Author
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M. Kannan, V. Ramkumar, and R. Dhamodharan
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Crystallography ,QD901-999 - Abstract
In the title compound, C12H14O2S3, a chain transfer agent (CTA) used in polymerization, the dihedral angle between the aromatic ring and the CS3 grouping is 84.20 (10)°. In the crystal, carboxylic acid inversion dimers linked by pairs of O—H...O hydrogen bonds generate R22(8) loops.
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- 2011
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3. 3-(9H-Carbazol-9-yl)propan-1-ol
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R. Dhamodharan, V. Ramkumar, and N. Haridharan
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Crystallography ,QD901-999 - Abstract
In the title compound, C15H15NO, the dihedral angle between the benzene rings is 2.25 (2)°. The C—C—C—O atoms of the propanol side chain are in a gauche conformation [torsion angle = −60.5 (2)°]. In the crystal, O—H...O hydrogen bonds link the molecules into C(2) chains propagating in [100]. The O-bonded H atom is disordered over two sites of equal occupancy.
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- 2011
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4. 2-Bromo-2-methyl-N-(4-methyl-2-oxo-2H-chromen-7-yl)propanamide
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N. Haridharan, V. Ramkumar, and R. Dhamodharan
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Crystallography ,QD901-999 - Abstract
In the title compound C14H14BrNO3, the coumarin ring system is almost planar (r.m.s. deviation = 0.008 Å) and an intramolecular C—H...O interaction generates an S(6) ring. In the crystal, molecules are linked by N—H...O hydrogen bonds, with the C=O unit of the coumarin ring system acting as the acceptor group, generating [010] C(8) chains. The chain connectivity is reinforced by two C—H...O interactions.
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- 2010
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5. 2-Oxo-4-trifluoromethyl-2H-chromen-7-yl 2-bromo-2-methylpropanoate
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N. Haridharan, V. Ramkumar, and R. Dhamodharan
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Crystallography ,QD901-999 - Abstract
In the title compound, C14H10BrF3O4, the coumarin ring system is almost plannar (r.m.s. deviation = 0.025 Å) and a short C—H...F contact occurs. The propanoate fragment is orientated almost perpendicular to the ring [dihedral angle = 71.80 (12)°]. In the crystal, molecules are linked by C—H...O hydrogen bonds, generating [100] chains.
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- 2010
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6. 2,4,6-Trimethyl-3,5-bis[(phenylcarbonothioyl)sulfanylmethyl]benzyl benzenecarbodithioate
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M. Kannan, V. Ramkumar, and R. Dhamodharan
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Crystallography ,QD901-999 - Abstract
In the title compound C33H30S6, the three pendant methylene benzodithioate groups lie to one side of the central benzene ring in a cis-cis-cis `tripod' arrangement. The dihedral angles between the central benzene ring and the three pendant rings are 72.54 (4), 89.68 (4) and 86.74 (4)°. In the crystal structure, one of the benzene rings is disordered over two orientations in a 0.559 (13):0.441 (13) ratio.
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- 2010
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7. Smart Obstacle Recognition System using Raspberry Pi
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S, Mohamed Ismail, primary, R, Gohul Raj, additional, R, Dhamodharan, additional, and Sekar, G., additional
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- 2021
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8. Genetic Diversity, Molecular Markers, and Population Genetics of Human Lymphatic Filarial Parasites
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S. L. Hoti and R. Dhamodharan
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biology ,Culex ,Anopheles ,Zoology ,biology.organism_classification ,medicine.disease ,medicine.disease_cause ,Brugia malayi ,Diethylcarbamazine ,Wuchereria bancrofti ,Ivermectin ,parasitic diseases ,Genetic variation ,medicine ,Lymphatic filariasis ,medicine.drug - Abstract
One of the most disfiguring diseases is lymphatic filariasis (LF) which is a major public health problem in tropical world. The disease is caused majorly by Wuchereria bancrofti and to smaller extent by Brugia malayi and B. timori. It is transmitted by mosquito vectors belonging to genera Culex, Anopheles, Aedes, and/or Mansonia. Currently, LF is targeted for elimination with mass drug administration of a combination of diethylcarbamazine/ivermectin and albendazole as a tool. Several rounds of MDA have already been administered in endemic communities, and questions have arisen pertaining to the continuance of parasite prevalence in some areas despite repeated rounds of MDA. This could be due to variations in the parasite strains that may not be responding to the anti-filarial drug administered. These variations could be the result of various factors such as geographic isolation, infra-population or refugia, environmental factors, and drug pressure. The long-term administration of the drug in the elimination program itself might have led to this phenomenon, or wide geographic distribution spanning continents might have affected variation. Investigating genetic variations among these variants may reveal the differential response to the anti-filarial drugs, and such studies are important for devising the drug administration strategies. In summary, there is a need to understand the genetic variation among the parasite populations in different LF endemic areas for which there is a need to develop appropriate markers. This review discusses the biological, physiological, and genetic variations among LF parasites.
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- 2018
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9. A chitosan/poly(ethylene glycol)-ran-poly(propylene glycol) blend as an eco-benign separator and binder for quasi-solid-state supercapacitor applications
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Raja, M., primary, Sadhasivam, Balaji, additional, Naik R, Janraj, additional, R, Dhamodharan, additional, and Ramanujam, Kothandaraman, additional
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- 2019
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10. Characterization of cofactor-independent phosphoglycerate mutase isoform-1 (Wb-iPGM) gene: A drug and diagnostic target from human lymphatic filarial parasite, Wuchereria bancrofti
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T. Sankari, S.L. Hoti, and R. Dhamodharan
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Microbiology (medical) ,Gene isoform ,DNA, Complementary ,Molecular Sequence Data ,Sequence alignment ,medicine.disease_cause ,Microbiology ,Brugia malayi ,Phosphoglycerate mutase ,parasitic diseases ,Genetics ,medicine ,Animals ,Humans ,Wuchereria bancrofti ,Amino Acid Sequence ,Molecular Biology ,Gene ,Peptide sequence ,Genes, Helminth ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Phosphoglycerate Mutase ,Base Sequence ,Sequence Homology, Amino Acid ,biology ,Molecular Sequence Annotation ,Helminth Proteins ,biology.organism_classification ,Molecular biology ,Filariasis ,genomic DNA ,Infectious Diseases ,Biochemistry ,Sequence Alignment - Abstract
The inter-conversion of 3-phosphoglycerate and 2-phosphoglycerate during glycolysis and gluconeogenesis in filarial nematodes, is catalyzed by a co-factor-independent phosphoglycerate mutase (iPGM). The gene encoding iPGM isoform-1 was amplified from Wuchereria bancrofti, the major causative agent of human lymphatic filariasis. Partial genomic DNA (gDNA) fragment of the gene was also amplified from periodic and sub-periodic forms of W. bancrofti and Brugia malayi and sequenced. The Wb-iPGM isoform-1 gene encodes an ORF of 515 amino acids and is found to share 99.4%, 96.0%, and 64.0% amino acid sequence identity with iPGM of B. malayi, Onchocerca volvulus, and Caenorhabditis elegans, respectively. Serine and all the other 13 amino acid residues involved in the catalytic function of iPGM are highly conserved. Further comparison of iPGM nucleotide and amino acid sequences of Wolbachia of B. malayi with Wb-iPGM showed 41% and 54.4% similarity, respectively. The analysis of partial genomic and amino acid sequences and phylogenetic tree of Wb-iPGM indicated that this gene, apart from being a potential drug target, could provide diagnostic, taxonomical, and evolutionary markers. This is the first report of the characterization of iPGM gene from W. bancrofti.
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- 2012
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11. Molecular differentiation of nocturnally periodic and diurnally sub-periodic Wuchereria bancrofti by Randomly Amplified Polymorphic DNA (RAPD)
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Manoj K. Das, R. Dhamodharan, S.L. Hoti, and Aditya P Dash
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Genetics ,Genetic diversity ,biology ,Phylogenetic tree ,Physiology ,General Medicine ,medicine.disease ,medicine.disease_cause ,biology.organism_classification ,Applied Microbiology and Biotechnology ,Genetic analysis ,Brugia malayi ,RAPD ,Filariasis ,Wuchereria bancrofti ,Evolutionary biology ,parasitic diseases ,medicine ,Lymphatic filariasis ,Biotechnology - Abstract
Wuchereria bancrofti, a nematode parasite, is responsible for causing 90% of lymphatic filariasis infection in the world. In India, W. bancrofti exists in two physiological forms, nocturnally periodic in the main land and diurnally sub-periodic in Car Nicobar group of islands. Differentiation of these two parasitic forms by conventional microscopic methods difficult requiring good skill and hence tedious. Therefore, we developed a simple and rapid Random Amplified Polymorphic DNA (RAPD) assay to differentiate these parasitic forms. Also, the phylogenetic relationship between periodic and sub-periodic W. bancrofti and also Brugia malayi populations was analyzed using RAPD profile generated. Distinct RAPD profiles were observed among the three parasites with the formation of three distinct clusters in the phylogenetic tree. Substantial genetic diversity (Nei's genetic diversity H) was observed among periodic (H = 0.0577) and sub-periodic (H = 0.1415) W. bancrofti populations.
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- 2010
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12. Studies on Ethylene Propylene Diene Rubber and Thermoplastic Polyurethane Blends: The Effect of Maleation
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R. Dhamodharan, Ganga Radhakrishnan, and Pralay Maiti
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Materials science ,Polymers and Plastics ,Diene ,EPDM rubber ,General Chemical Engineering ,Materials Science (miscellaneous) ,Maleic anhydride ,Ethylene propylene rubber ,chemistry.chemical_compound ,Thermoplastic polyurethane ,Natural rubber ,chemistry ,visual_art ,Materials Chemistry ,visual_art.visual_art_medium ,Polymer blend ,Thermoplastic elastomer ,Composite material - Abstract
Blends of maleated ethylene propylene diene rubber (EPDM) and thermoplastic polyurethane (TPU) have been studied to understand the effect of the maleation level of EPDM on the compatibility and morphology of the blends. Blends with different maleation levels on EPDM (0.25, 0.50, and 0.75 wt%) were compared for mechanical, thermal, and other properties. The appearance of single T g for 0.5% and 0.75% confirms that a maleation level of more than 0.5 wt% is required for EPDM blends with TPU. However, best mechanical properties are obtained for 0.5% maleated EPDM and TPU blends. Aging, filler reinforcement, and weather resistance measurements were also studied for the blends of varying maleation levels.
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- 2008
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13. Genetic heterogeneity of Wuchereria bancrofti populations at spatially hierarchical levels in Pondicherry and surrounding areas, south India
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R. Thangadurai, R. Dhamodharan, S.L. Hoti, and Pradeep Das
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Adult ,Male ,Rural Population ,Microbiology (medical) ,Adolescent ,Urban Population ,Population ,India ,Biology ,medicine.disease_cause ,Microbiology ,Host-Parasite Interactions ,Gene flow ,parasitic diseases ,Genetic variation ,Genetics ,medicine ,Animals ,Humans ,Wuchereria bancrofti ,Child ,education ,Molecular Biology ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Lymphatic filariasis ,Aged ,education.field_of_study ,Polymorphism, Genetic ,Genetic heterogeneity ,Ecology ,Age Factors ,Genetic Variation ,Middle Aged ,medicine.disease ,Filariasis ,Infectious Diseases ,Genetic structure ,Female ,Rural area - Abstract
Lymphatic filariasis (LF), caused by Wuchereria bancrofti is widely distributed in areas of India with variable geoclimatic factors. These factors, coupled with chemotherapeutic pressure exerted for past half a century may have influenced the genetic structure of the parasite populations. A complex genetic structure of parasite populations will have major consequences to the on-going global LF elimination programme. Hence, it is of interest to understand the genetic heterogeneity of W. bancrofti parasite populations. We studied the genetic heterogeneity of populations of W. bancrofti populations from mf carriers residing in an urban area of Pondicherry and surrounding villages through molecular (RAPD) fingerprinting. The analysis showed that W. bancrofti populations of an urban area were mostly highly heterogeneous, while those of rural areas were homogenous. The urban parasite populations appeared to be a pool of parasite population originating from surrounding rural areas. At least two genotypes, exhibiting high genetic differentiation and minimum gene flow between them, existed in Pondicherry urban areas. There was a minimum gene flow between parasite populations of villages. The genetic heterogeneity of parasite population in an adult microfilariae carrier was significantly high, possibly due to accumulation of different genotypes of the parasite with increasing age. The genetic heterogeneity of W. bancrofti populations in an individual mf carrier, in urban and rural areas, within an endemic area at large, and in different geographical regions of India may have far reaching implications to the epidemiology and strategies of chemotherapy control being adopted for LF elimination programme launched on a global scale.
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- 2008
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14. Genetic variability of diurnally sub-periodic Wuchereria bancrofti in Nicobarese tribe of Nicobar group of Islands, Andaman and Nicobar Islands, India
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R. Dhamodharan, Manoj K. Das, Aditya P Dash, Pradeep Das, and S.L. Hoti
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Population ,India ,Biology ,medicine.disease_cause ,Microfilaria ,Gene flow ,parasitic diseases ,medicine ,Animals ,Humans ,Parasite hosting ,Wuchereria bancrofti ,Genetic variability ,education ,Phylogeny ,education.field_of_study ,geography ,geography.geographical_feature_category ,Geography ,General Veterinary ,Ecology ,Dendrogram ,General Medicine ,Circadian Rhythm ,Filariasis ,Infectious Diseases ,Insect Science ,Archipelago ,Parasitology - Abstract
Sub-periodic form of Wuchereria bancrofti occurs in several well-isolated islands of Nicobar group of islands of Andaman Nicobar archipelago, India, presenting an interesting situation to study the genetic variability of its population. Microfilariae collected from 40 microfilaria (mf) carriers residing in eight locations on five islands (five carriers from each locality) were studied for genetic variability by generating random-amplified polymorphic DNA profiles. Phylognetic analysis of the profiles revealed a considerable genetic variability among parasite populations of different islands. The Nei's gene diversity between populations of 40 individual mf carriers ranged from 0.0218 to 0.2400. It was highest (0.24) among the parasite populations of Car Nicobar island and lowest (0.0218) among those of Payuha area of Camorta island and Teressa island. The dendrogram constructed exhibited four distinct clusters, which are geographically localized, and the gene flow between them appears to be influenced by human migration pattern.
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- 2008
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15. Study on Blends of Ethylene Propylene Diene Rubber and Thermoplastic Polyurethanes
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Pralay Maiti, R. Dhamodharan, and Ganga Radhakrishnan
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chemistry.chemical_classification ,Materials science ,Thermoplastic ,Polymers and Plastics ,Diene ,EPDM rubber ,General Chemical Engineering ,Materials Science (miscellaneous) ,Ethylene propylene rubber ,chemistry.chemical_compound ,Thermoplastic polyurethane ,chemistry ,Natural rubber ,visual_art ,Materials Chemistry ,visual_art.visual_art_medium ,Polymer blend ,Thermoplastic elastomer ,Composite material - Abstract
Blends of ethylene propylene diene rubber (EPDM) and thermoplastic polyurethane (TPU) have been studied to understand the compatibility and morphology. The study was initially done with unmodified EPDM and subsequently with modified EPDM through maleation process. Mechanical properties of unmodified EPDM blends are improved with the addition of TPU. However, the appearance of two T gs even at lower concentrations of PU in the blends indicates that the blends are incompatible. Blends of maleated EPDM with TPU showed a single T g and further improvement in mechanical properties which is attributed to the improvement in compatibility as also confirmed by SEM analysis.
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- 2007
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16. An allele specific PCR assay for screening for drug resistance among Wuchereria bancrofti populations in India
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S L, Hoti, R, Dhamodharan, K, Subramaniyan, and P K, Das
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Polymorphism, Genetic ,Base Sequence ,Molecular Sequence Data ,Drug Resistance ,Albendazole ,Polymerase Chain Reaction ,Elephantiasis, Filarial ,Filaricides ,Parasitic Sensitivity Tests ,Tubulin ,Animals ,Humans ,Wuchereria bancrofti ,Amino Acid Sequence ,Sequence Alignment ,Alleles - Abstract
Albendazole, a commonly used anthelminthic drug that targets the polymerization of alpha- and beta-tubulin dimer is currently co-administered with the antifilarial drug, diethylcarbamazine citrate (DEC) in the ongoing Global Programme for Elimination of Lymphatic Filariasis (GPELF). The experience in veterinary field has shown that there can be a rapid development of resistance to this drug, which therefore, needs to be monitored regularly in GPELF. Hence, we investigated the nucleotide polymorphism in the albendazole-binding domain of the isotype 1 beta-tubulin gene from several populations of Wuchereria bancrofti and developed an AS-PCR assay useful in screening for sensitive/resistance alleles among parasite populations and also evaluated its utility.For studying the polymorphism of isotype 1 beta-tubulin gene, a 475 bp fragment spanning exon 5 and 6 of the gene was amplified and sequenced from the genomic DNA of W. bancrofti collected from six geographic regions of India. An allele specific (AS) PCR for screening albendazole sensitivity/resistance was developed and a total of 55 mf samples from blood smears on slides collected from Thiruvannamalai, Thanjavur and Puducherry were screened. Selective therapy with DEC was in place in three areas, mass drug administration (MDA) with DEC alone was implemented in four areas, while DEC plus albendazole was administered in one district.The analysis of the nucleotide sequence of the fragment from 20 W. bancrofti populations showed the domain to be highly conserved. An allele-specific PCR assay developed was used to detect sensitive/resistance alleles among 55 isolates of W. bancrofti and no albendazole resistance alleles were detected among the populations tested.The drug-binding domain of isotype 1 beta-tubulin gene of W. bancrofti from different geographical locations was highly conserved. The AS-PCR developed showed potential application as a tool for monitoring albendazole sensitivity/resistance alleles among W. bancrofti populations, in areas where combination therapy of DEC-albendazole is being mass administered in the LF elimination programme.
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- 2009
17. Ambient temperature Atom Transfer Radical copolymerization of tetrahydrofurfuryl methacrylate and methyl methacrylate: Reactivity ratio determination
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Kannapiran Rajendrakumar and R. Dhamodharan
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Atoms ,Tetrahydrofurfuryl methacrylates ,Polymers and Plastics ,Bulk polymerization ,Polymers ,Radical polymerization ,General Physics and Astronomy ,Free radicals ,Catalysis ,Nuclear magnetic resonance ,Tetrahydrofurfuryl ,chemistry.chemical_compound ,Ambient temperatures ,Copolymerization ,Polymer chemistry ,Tetrahydrofurfuryl methacrylate ,Materials Chemistry ,Copolymer ,Reactivity (chemistry) ,Kelen-Tudos method ,Methyl methacrylate ,Heterocyclic monomers ,Atom transfer radical polymerization ,Reactivity ratio ,Rapid polymerization ,Catalysts ,Atom-transfer radical-polymerization ,Catalytic system ,Free radical polymerization ,Organic Chemistry ,Monomers ,Temperature ,Esters ,Conventional free-radical polymerization ,Oxygen atom ,Copolymer compositions ,Oxygen ,Monomer ,chemistry ,Polymerization ,IR spectroscopy ,Methyl methacrylates ,Ambient temperature ATRP ,Atom transfer radical copolymerization ,Acrylic monomers - Abstract
Tetrahydrofurfuryl methacrylate (THFMA), a heterocyclic monomer was polymerized by ambient temperature Atom Transfer Radical Polymerization (AT ATRP) using CuX/PMDETA/EBiB system. THFMA was found to undergo very rapid polymerization, in bulk. For a target DP > 200, bulk polymerization results in cross-linking as evidenced by (CH2)n,wag peaks (IR spectroscopy). Atom Transfer Radical copolymerization (ATRcP) of THFMA with MMA was performed and the reactivity ratios were calculated from the copolymer composition, as determined by 1H NMR, using Fineman-Ross and Kelen-Tudos methods. The reactivity ratios determined for ATRP were found to be significantly different from the literature values for conventional free radical polymerization (CFRP). This may be due to the coordination of copper catalytic system with the oxygen atom of the tetrahydrofurfuryl group that could lead to the variation in reactivity ratios. 1H NMR evidence for catalyst-monomer interaction is also provided. � 2009 Elsevier Ltd. All rights reserved.
- Published
- 2009
18. Poly(4-(1-hydroxyalkyl)styrene based photoresist materials: design, synthesis, and their lithographic performance
- Author
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Mohammed J. Nasrullah and R. Dhamodharan
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chemistry.chemical_classification ,Materials science ,Polymer ,Photoresist ,law.invention ,chemistry.chemical_compound ,Anionic addition polymerization ,Monomer ,chemistry ,Chemical engineering ,Polymerization ,law ,Polymer chemistry ,Copolymer ,Photolithography ,Ionic polymerization - Abstract
Several synthetic approaches are available to make photoresist polymers for deep UV (DUV) lithography. Two approaches were widely used in semiconductor manufacturing: i) direct polymerization of corresponding monomers by (controlled) radical, (living) ionic polymerization ii) thermal or chemical catalyzed deprotection or protection of the macromolecules. The latter approach which is also called polymer modification chemistry (PMC) or polymer analogous chemistry offers several advantageous over the direct polymerization approach. In this presentation, we will provide an overview on the preparation and basic lithographically important characterization of new polymers based on poly(4-(1-hydroxyalkyl)styrene -co- styrene) [Poly(4-HAS -co- S)]. These polymers were synthesized for the first time by PMC and this methodology is an simple alternative for the synthesis of poly(4-HAS -co- S) than conventionally used synthetically challenging free radical or low temperature anionic polymerization of the protected monomer. We have synthesized high and low molecular weight (M n ) polymers with mole fraction of functional group ranging from partial to complete functionalization. Several formulations based on poly(4-HAS -co- S) were developed and tested for negative tone imaging at DUV lithography. Lithographic performance of these polymers at DUV lithography will be compared with their molecular weight and mole fraction of functional groups.
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- 2006
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19. Dielectric studies of hydrogen bonded polar binary mixtures of ethyl benzoate with aromatic amines
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B. Subramanyam, R. Dhamodharan, M. Chitra, V. Madhurima, and V.R.K. Murthy
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Ethyl benzoate ,Hydrogen ,Hydrogen bond ,Binary mixtures ,chemistry.chemical_element ,Aromatic amines ,Debye plots ,Hydrogen bonded polar binary mixtures ,Hydrogen bonds ,Solvent ,chemistry.chemical_compound ,Aniline point ,Aniline ,chemistry ,Computational chemistry ,Computational methods ,Physical chemistry ,Amines ,Benzene ,Molecular structure ,Dielectric liquids ,Methyl group - Abstract
The chosen liquids: ethyl benzoate, aniline and n-methyl aniline are high boiling point liquids for possible microwave applications. Dielectric measurements are carried out at 300 KHz, 5.59 GHz, 7.95 GHz, 33.7 GHz, 72 GHz and at optical frequency on the above polar liquids and their equimolar binary mixtures diluted in non-polar solvent (benzene). Cole-Davidson plot is obtained for the binary mixture of ethyl benzoate and aniline whereas Debye plot is observed for the binary mixture of ethyl benzoate and N-methyl aniline in dilute solutions of benzene. The binary mixture of an associated liquid aniline and non-associated liquid ethyl benzoate leads to formation of an extensive tree like hydrogen bonded system. In N-methyl aniline, where one hydrogen atom of the -NH/sub 2/ group is replaced by a methyl group, it acts as a terminator to prevent hydrogen bonding. The experimentally determined dipole moments are compared with computational results obtained from semiempirical molecular orbital package MOPAC Version 6.0 and ab initio calculations using the Gaussian 92 W program. The results are discussed.
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- 2003
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20. Hepatoprotective activity of methanolic extract of Syzygium jambos (Linn.) leaf against paracetamol intoxicated Wistar albino rats
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Sathyabalan Murugesan, N Thamizh Selvam, V. Venkatakrishnan, R Dhamodharan, and S Damodar Kumar
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medicine.medical_specialty ,food.ingredient ,paracetamol ,business.industry ,Syzygium jambos ,General Medicine ,Pharmacology ,Body weight ,Pharmacological Study ,food ,liver marker enzymes ,Hepatoprotection ,Hepatic damage ,medicine ,Alkaline phosphatase ,Histopathology ,Liver function ,business ,Marker enzymes - Abstract
Hepatoprotective activity of methanolic extract of Syzygium jambos (Alston) (Linn.) leaves against Paracetamol-induced hepatic damage in Wistar albino rats was observed at two different doses, 100 and 200 mg/kg body weight. The healthy control, disease control, and standard drug Silymarin-treated groups were also maintained for the comparison. The liver marker enzymes SGOT, SGPT, ALKP, Serum Bilirubin and other metabolic parameters like total cholesterol, HDL-cholesterol were evaluated in all the experimental groups. The changes in liver function parameters were significant in comparison to disease control group and the observed efficacy was comparable to standard drug. The efficacy of the extract was found to be dose dependent. The histopathology study of liver also supports the presence of hepatoprotective activity in S. jambos by showing improved cytoarchitecture of liver cells in the treated groups. The results obtained in this study indicate necessity for further research on isolation and characterization of functional molecules from the extract.
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- 2013
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21. 3.307 IN VITRO AMPLIFICATION OF VARIOUS ALPHA SYNUCLEIN FIBRILS
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H.J. Shin, R. Dhamodharan, W.K. Lim, and A. Aravinthan
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Alpha-synuclein ,chemistry.chemical_compound ,Neurology ,chemistry ,Biophysics ,Neurology (clinical) ,Geriatrics and Gerontology ,Fibril ,In vitro - Published
- 2012
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22. Cloning and sequence analysis of partial genomic DNA coding for HtrA-type serine protease of Wolbachia from human lymphatic filarial parasite, Wuchereria bancrofti
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R. Dhamodharan, Manoj K. Das, G Sivapragasam, and S.L. Hoti
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Genetics ,Serine protease ,Proteases ,biology ,Sequence analysis ,biology.organism_classification ,medicine.disease_cause ,Virology ,Brugia malayi ,Wuchereria bancrofti ,parasitic diseases ,medicine ,biology.protein ,HtrA serine protease ,bacteria ,Original Article ,Wolbachia ,lymphatic filariasis ,Peptide sequence ,Gene - Abstract
Background: Periplasmic serine proteases of HtrA type of Wolbachia have been shown to play a role in the pathogenesis of filarial disease. Aims: This study was aimed to sequence Wb-HtrA serine protease and analyze its phylogenetic position by comparing with other filarial and non-filarial nematode homologs. Materials and Methods: Partial HtrA gene fragment was amplified from DNA isolated from periodic and sub-periodic Wuchereria bancrofti parasites collected from Pondicherry and Nicobar islands, respectively. The amplicons were sequenced, and sequence homology and phylogenetic relationship with other filarial and non-filarial nematodes were analyzed. Results: Partial orthologue of HtrA-type serine protease from Wolbachia of W. bancrofti was amplified, cloned and sequenced. The deduced amino acid sequence exhibited 87%, 81% and 74% identity with the homologous Wolbachia proteases identified from Brugia malayi, Onchocerca volvulus and Drosophila melanogaster , respectively. The Wb-HtrA has arthologues in several proteobacteria with very high homology and hence is highly conserved not only among Wolbachia of filarial parasites but also across proteobacteria. The phylogenetic tree constructed using Neighbor-Joining method showed two main clusters: cluster-I containing bacteria that dwell in diverse habitats such as soil, fresh and marine waters and plants and cluster-II comprising Anaplasma sp. and Erlichia , and Wolbachia endosymbionts of insects and nematodes, in distinct groups. Conclusions: HtrA-type serine protease from Wolbachia of W. bancrofti is highly conserved among filarial parasites. It will be of interest to know whether filarial Wolbachia HtrA type of serine protease might influence apoptosis and lymphatic epithelium, thereby playing a role in the filarial pathogenesis. Such information will be useful for identifying targets for the development of newer drugs for filariasis treatment, especially for preventing lymphatic pathology.
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- 2011
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23. Selective Hydrogenation of Phenylacetylene Using Block Copolymer Additional Poisoning Agent
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R. Dhamodharan
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chemistry.chemical_compound ,Monomer ,Phenylacetylene ,chemistry ,Polymer chemistry ,Copolymer ,Organic chemistry ,General Chemistry ,Gas chromatography ,Selectivity ,Catalysis - Abstract
A block copolymer, poly (styrenc-block-4-vinylpyridine) is used as an additional poisoning agent in combination with Lindlar's catalyst to drastically afreet the selectivity in the semi-hydrogenation of phenylacetylene. Selectivity is demonstrated from gas chromatography data. The extra advantage in terms of preparing poisoning agent free, very pure and dry monomer are illustrated.
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- 1996
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24. Arborescent Polystyrene via Ambient Temperature ATRP: Toward Ordered Honeycomb Microstructured Templates.
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A. V. Vivek, K. Babu, and R. Dhamodharan
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- 2009
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25. A Robust Method for the Immobilization of Polymer Molecules on SiO2Surfaces.
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G. K. Raghuraman, R. Dhamodharan, Oswald Prucker, and Jürgen Rühe
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POLYMERS , *MONOMOLECULAR films , *POLYMERIZATION , *MOLECULES - Abstract
In this work, we describe the use of hydridosilanes for the attachment of polymer monolayers to SiO2surfaces. In one approach, first a benzophenone group containing hydridosilane is self-assembled on the SiO2surface followed by photochemical attachment of polymer chains deposited onto the monolayer. In a second approach an ATRP initiator is self-assembled to the substrate surface, again using hydridosilane anchor groups. The surface-attached initiator groups are subsequently used for the growth of surface-attached polymer chains in a surface-initiated polymerization reaction. It is shown that, while chlorosilanes require rather stringent exclusion of moisture during self-assembly, the hydridosilanes are rather robust and functional monolayers are formed even under ambient conditions. That in turn allows for the use of silanes in standard printing processes. In contrast to printing of chlorosilanes, which must be carried out under strictly anhydrous conditions, printing of hydridosilanes thus represents a simple and versatile technique for the generation of microstructured surfaces. [ABSTRACT FROM AUTHOR]
- Published
- 2008
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26. Ambient Temperature Polymerization of Styrene by Single Electron Transfer Initiation, Followed by Reversible Addition Fragmentation Chain Transfer Control.
- Author
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S. Harihara Subramanian, R. Prakash Babu, and R. Dhamodharan
- Published
- 2008
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27. Grafting of methacrylates and styrene on to polystyrene backbone via a “grafting from” ATRP process at ambient temperature.
- Author
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A. V. Vivek and R. Dhamodharan
- Subjects
- *
METHYL methacrylate , *GRAFT copolymers , *POLYMERIZATION , *CHEMICAL reactions - Abstract
Well defined graft copolymers are prepared by “grafting from” atom transfer radical polymerization (ATRP) at room temperature (30 °C). The experiments were aimed at grafting methacrylates and styrene at latent initiating sites of polystyrene. For this purpose, the benzylic hydrogen in polystyrene was subjected to allylic bromination with N‐bromosuccinimide and azobisisobutrylnitirle to generate tertiary bromide ATRP initiating sites (Br—C—PS). The use of Br—C—PS with lesser mol % of bromide initiating groups results in better control and successful graft copolymerization. This was used to synthesize a series of new graft copolymers such as PS‐g‐PBnMA, PS‐g‐PBMA, PS‐g‐GMA, and PS‐g‐(PMMA‐b‐PtBA) catalyzed by CuBr/PMDETA system, in bulk, at room temperature. The polymers are characterized by GPC, NMR, FTIR, TEM, and TGA. Graft copolymerization followed by block polymerization enabled the synthesis of highly branched polymer brush, in which the grafting density can be adjusted by appropriate choice of bromide concentration in the polystyrene. © 2007 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 45: 3818–3832, 2007 [ABSTRACT FROM AUTHOR]
- Published
- 2007
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28. Synthesis and characterization of statistical copolymers of styrene and 4-(1-hydroxyalkyl)styrene.
- Author
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J. Mohammed Nasrullah and R. Dhamodharan
- Published
- 2004
29. Managing drug therapy-related problems and assessment of chronic diabetic wounds.
- Author
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Mahendran MIMS, Gopalakrishnan V, Saravanan V, Dhamodharan R, Jothimani P, Balasubramanian M, Singh AK, and Vaithianathan R
- Subjects
- Humans, Medication Adherence, Chronic Disease, Polypharmacy, Biofilms drug effects, Diabetes Mellitus, Type 2 drug therapy, Diabetes Mellitus, Type 2 complications, Wound Healing drug effects, Hypoglycemic Agents adverse effects, Hypoglycemic Agents therapeutic use, Diabetic Foot drug therapy
- Abstract
Type 2 diabetes mellitus (T2DM), responsible for most diabetes cases recorded worldwide, increases the risk of chronic wounds and amputation. Patients with T2DM appear to be more susceptible to delayed wound healing due to their treatment adherence. This review explores the specifics of polypharmacy, side effects, possible drug interactions and the importance of medication adherence for therapeutic efficacy. We discuss the effects of anti-diabetes medications on wound healing as well as the role that biofilms and microbial infections play in diabetic wounds. Inconsistent use of medications can lead to poor glycaemic control, which negatively affects the healing process of diabetic foot ulcers. Managing chronic wounds represents a substantial portion of healthcare expenditures. Biofilm-associated infections are difficult for the immune system to treat and respond inconsistently to antibiotics as these infections are slow growing and persistent. Additionally, we emphasize the critical role pharmacists play in enhancing patient adherence and optimizing diabetes treatment by offering comprehensive coverage of drugs associated with problems related to pharmacological therapy in type 2 diabetes.
- Published
- 2024
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30. Macroporous scaffold of chitosan as soilless medium for seed germination and seedling growth.
- Author
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Sharma R and Dhamodharan R
- Subjects
- Porosity, Urea chemistry, Water chemistry, Chitosan chemistry, Germination drug effects, Seedlings growth & development, Seedlings drug effects, Seeds growth & development, Seeds drug effects, Seeds chemistry
- Abstract
The preparation of soilless medium for the growth of seeds based on macroporous scaffolds of chitosan-glutaric acid and urea (CHGAUR) is reported. The CHGAUR scaffold was prepared by the hydrothermal reaction of chitosan with GA in presence of urea. The product was purified using Soxhlet extraction with methanol. CHGAUR was composed of chitosan with a small weight fraction of glutaric acid and urea, which were present in the salt form as confirmed by TGA and FT IR spectroscopy. This suggested that CH is most likely to be physically crosslinked in the scaffold through GAUR links. SEM images confirmed the porous structure of material. Water absorption studies suggested that CHGAUR could absorb ∼4100-5700 % water and could be varied by varying the CH: UR ratio used in the preparation. The percentage porosity of CHGAUR did not vary much with urea content suggesting that significant variation in the micropore structure was not obtained by varying the urea content in the preparation. Mechanical tests revealed that material was soft and flexible and able to retain its original shape even after removing the load. CHGAUR, in purified state, was studied for the germination and seedling growth. Among the seeds investigated, pigeon pea showed the best result., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)
- Published
- 2024
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31. Tannic acid crosslinked chitosan-guar gum composite films for packaging application.
- Author
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Sharma R and Dhamodharan R
- Subjects
- Steam, Tensile Strength, Antioxidants, Permeability, Solubility, Food Packaging, Chitosan chemistry, Galactans, Mannans, Plant Gums, Polyphenols
- Abstract
Chitosan (CH)-guar gum (GG) composite films crosslinked with tannic acid (TnA) were prepared by solution casting method. The films were then immersed in 5 % aqueous NH
3 and dried again. They were characterized by IR spectroscopy, wide angle x-ray diffraction and thermogravimetric analysis. All the films were studied for physicochemical properties such as moisture content, swelling, solubility in water, water contact angle, water vapor permeability, opacity, tensile strength and antioxidant activity. The physicochemical and mechanical properties of films changed significantly when compared to CH as reflected by an increase in the amorphous domains of the films, a decrease in moisture content, swelling and solubility in water. The films turned hydrophobic with concomitant decrease in moisture content, swelling, water-solubility and exhibited improved UV absorption as well as mechanical strength, which in turn was dependent on the tannic acid concentration. These results along with enhanced antioxidant properties, UV absorption with no significant change in water vapor permeation compared to CH suggested that the films could find application in packaging applications., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)- Published
- 2024
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32. Scale-up of non-toxic poly(butylene adipate-co-terephthalate)-Chitin based nanocomposite articles by injection moulding and 3D printing.
- Author
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Sadhasivam B, Ramamoorthy D, and Dhamodharan R
- Subjects
- Animals, Biodegradable Plastics pharmacology, Butylene Glycols pharmacology, Chitin pharmacology, Phthalic Acids chemistry, Phthalic Acids pharmacology, Polyesters chemistry, Polyesters pharmacology, Polymers pharmacology, Printing, Three-Dimensional, Rats, Spectroscopy, Fourier Transform Infrared, Tensile Strength, X-Ray Diffraction, Biodegradable Plastics chemistry, Butylene Glycols chemistry, Chitin chemistry, Nanocomposites chemistry, Polymers chemistry
- Abstract
Poly(butylene adipate-co-terephthalate) (PBAT), a compostable polymer, filled with different weight percentage of unbleached nano chitin (NC; 10%, 30% and 50%), a biodegradable filler from crustacean waste, were prepared from the extruded blends by injection moulding and 3D printing. The nanochitin required was prepared from chitin isolated from prawn shells (Fenneropenaeus indicus). The nanochitin crystals were observed to contain carboxylic acid surface functional groups as assessed by FT-IR,
13 C solid state NMR (SS NMR) spectroscopy, zeta potential measurements and the extent of the same was estimated by potentiometric titration. The PBAT-NC nanocomposites were characterized SS NMR spectroscopy, FT-IR spectroscopy, wide angle X-ray diffraction, dynamic mechanical analysis, DSC and TGA. Thermal and mechanical properties of the nanocomposites were determined. The moulded nanocomposites changed more and more rigid with increasing weight percentage of NC without significant change in the tensile strength. The TGA indicated that the thermal stability of PBAT could be improved but not significantly by the addition of NC. Wound healing was enhanced in the presence of the nanocomposite while in vivo toxicity was significant at high concentration. The PBAT-NC nanocomposites could be moulded in to useful articles such as laptop charger cover, rat cover for washing machine, planters and key holders under conditions similar to that used in the processing of LDPE., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier B.V. All rights reserved.)- Published
- 2020
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33. Biocompatible hydrogels of chitosan-alkali lignin for potential wound healing applications.
- Author
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Ravishankar K, Venkatesan M, Desingh RP, Mahalingam A, Sadhasivam B, Subramaniyam R, and Dhamodharan R
- Subjects
- Animals, Biocompatible Materials chemistry, Carbon-13 Magnetic Resonance Spectroscopy, Cell Survival drug effects, Chitosan chemistry, Elastic Modulus, Embryo, Nonmammalian drug effects, Hardness, Hydrogels chemistry, Lignin chemistry, Mice, NIH 3T3 Cells, Rheology, Thermogravimetry, X-Ray Diffraction, Zebrafish embryology, Alkalies pharmacology, Biocompatible Materials pharmacology, Chitosan pharmacology, Hydrogels pharmacology, Lignin pharmacology, Wound Healing drug effects
- Abstract
Biocompatible hydrogels were prepared by mixing aqueous-acidic solution of chitosan with alkali lignin, a major by-product of the paper producing industries, for the first time, by sustainable means. Electrostatic interactions between the phenoxide groups in lignin and the ammonium groups on the chitosan backbone were found to be responsible for the ionotropic cross-linking. These gels were non-toxic to Mesenchymal stem cells, in vitro, and to zebrafish up to 100 μg/ml, in vivo. In addition, these gels provided a conducive surface for cell attachment and proliferation, making it suitable for application as scaffolds in tissue engineering. In presence of the hydrogel, NIH 3T3 mouse fibroblast cells showed good cell migration characteristics suggesting that the gel might be suitable for wound healing application. The chitosan-alkali lignin gelation system was further capable of removing ferric ions from contaminated water by way of complexation and coagulation. Cross-linked films of chitosan and alkali lignin could also be prepared by simply immersing chitosan films into a solution of alkali lignin. Alkali lignin was observed to diffuse into the chitosan "crystal", forming electrostatic cross-links between the chitosan chains. The choice of lignin, in comparison to the other ionotropic cross-linkers for chitosan, makes the cross-linking system, inexpensive and sustainable., (Copyright © 2019 Elsevier B.V. All rights reserved.)
- Published
- 2019
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34. Facile, shear-induced, rapid formation of stable gels of chitosan through in situ generation of colloidal metal salts.
- Author
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Ravishankar K, Kanniyappan H, Shelly KM, Muthuvijayan V, and Dhamodharan R
- Abstract
A novel method of preparing chitosan gels using in situ generated negatively-charged colloidal salts of a variety of metal ions is described. Their potential as scaffolds for tissue-engineering and as recoverable catalysts in aza-Michael addition is demonstrated here. Given their wide range of properties, they have broad scope for applications.
- Published
- 2018
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35. Biocompatible Porous Scaffolds of Chitosan/Poly(EG- ran -PG) Blends with Tailored Pore Size and Nontoxic to Mesenchymal Stem Cells: Preparation by Controlled Evaporation from Aqueous Acetic Acid Solution.
- Author
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Sadhasivam B, Ravishankar K, Desingh R, Subramaniyam R, and Dhamodharan R
- Abstract
The preparation of porous films (average size variation from 1 to 32 μm) of a 1:1 blend of chitosan with poly(EG- ran -PG) by the controlled evaporation of water from a 2 wt % aqueous acetic acid solution is reported. Interestingly, the blend exhibited porosity that could be tailored from 1 to 32 μm with the temperature of preparation of the blend film. The powder X-ray diffraction, Fourier transform infrared, and differential scanning calorimetry analyses of the films suggested the formation of partially miscible blends. Temperature-induced phase separation of the blend appears to be the mechanism of pore formation. The tensile strength, cytotoxicity, and biocompatibility of the blend films for the growth of mesenchymal stem cells were assessed vis-a-vis chitosan. The 1:1 blend film was observed to lack cytotoxicity and was also viable for the growth of mesenchymal stem cells. The tensile properties of the 1:1 blend were superior to those of the chitosan film. The simple preparation of porous, nontoxic, and biocompatible films could find use as a scaffold in the growth of tissue, and especially bone tissue, in wound dressing, and in filtration if a better control over pore size is achieved., Competing Interests: The authors declare no competing financial interest.
- Published
- 2018
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36. Phenothiazine Based Donor-Acceptor Compounds with Solid-State Emission in the Yellow to NIR Region and Their Highly Selective and Sensitive Detection of Cyanide Ion in ppb Level.
- Author
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Ramachandran E, Vandarkuzhali SAA, Sivaraman G, and Dhamodharan R
- Abstract
Four new novel donor-acceptor (A-π-D-A, A-D-π-D-A) compounds (1 a, 1 b, 2 a and 2 b) based on ethylenedioxythiophene (EDOT) and phenothiazine (PTz) have been rationally designed and synthesized towards solid state emission ranging from yellow to near infrared (NIR). The compounds 1 b and 2 b, in thin film form, showed an emission maximum at 713 nm and 696 nm, respectively, with the corresponding absolute solid-state quantum yield of 3.3 % and 9.0 %. The fluorophores showed high emission in the doped state as well when dispersed in polystyrene (PS) matrix with emission maximum ranging from 536 nm to 648 nm with quantum yield in the range 12.4 %-64.4 %. The presence of dicyanovinyl (DCV) group in both the fluorophores was exploited towards cyanide sensing in DMSO leading to turn-on fluorescence emission with high selectivity and sensitivity for cyanide ion with a detection limit of as low as 0.32 μm (8 ppb) for 1 b and 0.57 μm (14 ppb) for 2 b. DFT and TTDFT calculations suggested that the addition of cyanide ion prevented the intramolecular charge transfer (ICT) from the donor (PTz or EDOT) to acceptor (DCV), thereby turning the fluorescence "On". Using fluorescent spectral and color switching, we have explored logic gates with single and two input signal amplification by applying chemical and light inputs in the form of CN
- ion and UV., (© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)- Published
- 2018
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37. Super water absorbing polymeric gel from chitosan, citric acid and urea: Synthesis and mechanism of water absorption.
- Author
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Narayanan A, Kartik R, Sangeetha E, and Dhamodharan R
- Abstract
A new superabsorbent with maximum water absorption capacity of ∼1250 g/g is prepared by hydrothermal synthesis from sustainable and biodegradable resources such as chitosan, citric acid and urea (denoted as 'CHCAUR'). CHCAUR is characterized extensively by various analytical techniques such as PXRD, SSNMR, FTIR, and TGA. Pure and saline water absorption study showed that CHCAUR could be a better adsorbent compared to the super absorbent polymer (SAP) used in commercial diaper material. The mechanism of water absorption is shown to arise out of a combination of electrostatic attraction of water to the ionic crosslinks and the presence of macropores as well as undulated surface due to the formation of nanofibrous bundles. When applied to soil CHCAUR was found to decrease water evaporation rate significantly., (Copyright © 2018 Elsevier Ltd. All rights reserved.)
- Published
- 2018
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38. Green, Seed-Mediated Synthesis of Au Nanowires and Their Efficient Electrocatalytic Activity in Oxygen Reduction Reaction.
- Author
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Balasubramanian S, Sheelam A, Ramanujam K, and Dhamodharan R
- Abstract
A new, simple, green method for the synthesis of Au nanowires (average diameter 8 nm and several micrometers in length) using Au seeds prepared from bael gum (BG) is reported. The nanowires are characterized using UV-visible absorption spectroscopy, powder X-ray diffraction, transmission electron microscopy (TEM), and high-resolution-TEM. It is observed that the rate of the reduction process might be the decisive factor for the shape selectivity, as evident from the formation of nanowires at a particular concentration of seeds and NaOH. The polysaccharide present in BG is the active ingredient for the synthesis of Au nanowires, while the small molecules present in BG, when used alone, did not result in nanowire formation. The TEM images of the precursor to the Au nanowires suggested that new, nucleated particles align in a linear manner and fuse with one another, resulting in the nanowire. The linear fusion of the newly nucleated particles could be due to the lack of adequate protecting agent and the presence of Au complex adsorbed to the surface. The electrochemical activity of the nanowires for oxygen reduction reaction (ORR) is assessed and compared with that of nanotriangles and spherical nanoparticles of Au. The performance of Au nanowire is better than Au-nanomaterials (heat-treated as well as non-heat-treated), Au seeds, and clusters. The better efficiency of the nanowires when compared to that of the other reported catalysts is attributed to the presence of active (100) facets with numerous corners, edges, and surface defects.
- Published
- 2017
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39. Super water-absorbing new material from chitosan, EDTA and urea.
- Author
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Narayanan A and Dhamodharan R
- Subjects
- Agriculture, Delayed-Action Preparations chemistry, Edetic Acid chemistry, Water administration & dosage, Chitosan chemistry, Edetic Acid analogs & derivatives, Hydrogel, Polyethylene Glycol Dimethacrylate chemistry, Urea chemistry, Water chemistry
- Abstract
A new, super water-absorbing, material is synthesized by the reaction between chitosan, EDTA and urea and named as CHEDUR. CHEDUR is probably formed through the crosslinking of chitosan molecules (CH) with the EDTA-urea (EDUR) adduct that is formed during the reaction. CHEDUR as well as the other products formed in control reactions are characterized extensively. CHEDUR exhibits a very high water uptake capacity when compared with chitosan, chitosan-EDTA adduct, as well as a commercial diaper material. A systematic study was done to find the optimum composition as well as reaction conditions for maximum water absorbing capacity. CHEDUR can play a vital role in applications that demand the rapid absorption and slow release of water such as agriculture, as a three in one new material for the slow release of urea, water and other metal ions that can be attached through the EDTA component. The other potential advantage of CHEDUR is that it can be expected to degrade in soil based on its chitosan backbone. The new material with rapid and high water uptake could also find potential applications as biodegradable active ingredient of the diaper material., (Copyright © 2015 Elsevier Ltd. All rights reserved.)
- Published
- 2015
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40. Non-contiguous finished genome sequence and description of Corynebacterium jeddahense sp. nov.
- Author
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Edouard S, Bibi F, Dhamodharan R, Lagier JC, Azhar EI, Robert C, Caputo A, Yasir M, Jiman-Fatani AA, Alawi M, Fournier PE, and Raoult D
- Abstract
Corynebacterium jeddahense sp. nov., strain JCB(T), is the type strain of Corynebacterium jeddahense sp. nov., a new species within the genus Corynebacterium. This strain, whose genome is described here, was isolated from fecal flora of a 24-year-old Saudi male suffering from morbid obesity. Corynebacterium jeddahense is a Gram-positive, facultative anaerobic, nonsporulating bacillus. Here, we describe the features of this bacterium, together with the complete genome sequencing and annotation, and compare it to other member of the genus Corynebacterium. The 2,472,125 bp-long genome (1 chromosome but not plasmid) contains 2,359 protein-coding and 53 RNA genes, including 1 rRNA operon.
- Published
- 2014
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41. Hepatoprotective activity of methanolic extract of Syzygium jambos (Linn.) leaf against paracetamol intoxicated Wistar albino rats.
- Author
-
Selvam NT, Venkatakrishnan V, Dhamodharan R, Murugesan S, and Kumar SD
- Abstract
Hepatoprotective activity of methanolic extract of Syzygium jambos (Alston) (Linn.) leaves against Paracetamol-induced hepatic damage in Wistar albino rats was observed at two different doses, 100 and 200 mg/kg body weight. The healthy control, disease control, and standard drug Silymarin-treated groups were also maintained for the comparison. The liver marker enzymes SGOT, SGPT, ALKP, Serum Bilirubin and other metabolic parameters like total cholesterol, HDL-cholesterol were evaluated in all the experimental groups. The changes in liver function parameters were significant in comparison to disease control group and the observed efficacy was comparable to standard drug. The efficacy of the extract was found to be dose dependent. The histopathology study of liver also supports the presence of hepatoprotective activity in S. jambos by showing improved cytoarchitecture of liver cells in the treated groups. The results obtained in this study indicate necessity for further research on isolation and characterization of functional molecules from the extract.
- Published
- 2013
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42. Characterization of cofactor-independent phosphoglycerate mutase isoform-1 (Wb-iPGM) gene: a drug and diagnostic target from human lymphatic filarial parasite, Wuchereria bancrofti.
- Author
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Dhamodharan R, Hoti SL, and Sankari T
- Subjects
- Amino Acid Sequence, Animals, Base Sequence, DNA, Complementary genetics, Helminth Proteins chemistry, Helminth Proteins metabolism, Humans, Molecular Sequence Annotation, Molecular Sequence Data, Phosphoglycerate Mutase chemistry, Phosphoglycerate Mutase metabolism, Phylogeny, Sequence Alignment, Sequence Homology, Amino Acid, Filariasis parasitology, Genes, Helminth, Helminth Proteins genetics, Phosphoglycerate Mutase genetics, Wuchereria bancrofti enzymology, Wuchereria bancrofti genetics
- Abstract
The inter-conversion of 3-phosphoglycerate and 2-phosphoglycerate during glycolysis and gluconeogenesis in filarial nematodes, is catalyzed by a co-factor-independent phosphoglycerate mutase (iPGM). The gene encoding iPGM isoform-1 was amplified from Wuchereria bancrofti, the major causative agent of human lymphatic filariasis. Partial genomic DNA (gDNA) fragment of the gene was also amplified from periodic and sub-periodic forms of W. bancrofti and Brugia malayi and sequenced. The Wb-iPGM isoform-1 gene encodes an ORF of 515 amino acids and is found to share 99.4%, 96.0%, and 64.0% amino acid sequence identity with iPGM of B. malayi, Onchocerca volvulus, and Caenorhabditis elegans, respectively. Serine and all the other 13 amino acid residues involved in the catalytic function of iPGM are highly conserved. Further comparison of iPGM nucleotide and amino acid sequences of Wolbachia of B. malayi with Wb-iPGM showed 41% and 54.4% similarity, respectively. The analysis of partial genomic and amino acid sequences and phylogenetic tree of Wb-iPGM indicated that this gene, apart from being a potential drug target, could provide diagnostic, taxonomical, and evolutionary markers. This is the first report of the characterization of iPGM gene from W. bancrofti., (Copyright © 2012 Elsevier B.V. All rights reserved.)
- Published
- 2012
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43. N,N'-(1,4-Phenyl-ene)bis-(2-bromo-2-methyl-propanamide).
- Author
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Haridharan N, Ramkumar V, and Dhamodharan R
- Abstract
The mol-ecular structure of the title compound, C(14)H(18)Br(2)N(2)O(2), has one half-mol-ecule in the asymmetric unit. The mol-ecule has a crystallographic inversion centre in the middle of the benzene ring. The C-C-N-C torsion angle between the benzene ring and the bromo-amide group is 149.2 (7)°. The crystal is stabilized by a strong inter-molecular N-H⋯O bond and weak C-H⋯O inter-actions. These contacts give rise to a three-dimensional network.
- Published
- 2012
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44. 3-({[(1-Phenyl-eth-yl)sulfan-yl]methane-thio-yl}sulfan-yl)propanoic acid.
- Author
-
Kannan M, Ramkumar V, and Dhamodharan R
- Abstract
In the title compound, C(12)H(14)O(2)S(3), a chain transfer agent (CTA) used in polymerization, the dihedral angle between the aromatic ring and the CS(3) grouping is 84.20 (10)°. In the crystal, carb-oxy-lic acid inversion dimers linked by pairs of O-H⋯O hydrogen bonds generate R(2) (2)(8) loops.
- Published
- 2011
- Full Text
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45. Synthesis and morphological study of thick benzyl methacrylate-styrene diblock copolymer brushes.
- Author
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Munirasu S, Karunakaran RG, Rühe J, and Dhamodharan R
- Abstract
We demonstrate, for the first time, the synthesis of model poly(benzyl methacrylate) [P(BnMA)] brushes of very high thickness (>300 nm) on silicon wafer. P(BnMA) brush is also synthesized from the surface of silica nanoparticles, from a covalently anchored initiator monolayer, using ambient temperature ATRP. The kinetic studies and block copolymerization from the surface anchored P(BnMA)-Br macroinitiator showed that the polymerization was controlled in nature. AFM, ellipsometry, and water contact angle were used for the characterization of the polymer brush. The grafting density of the P(BnMA) brush, formed by immersion in a dilute monomer solution, was relatively less (∼11% less) in comparison to that obtained by immersion in neat monomer under similar conditions. The P(BnMA)-Br macroinitiator brushes were used to synthesize P(BnMA-b-S) diblock copolymer brushes by the ATRP of styrene at 95 °C. The P(BnMA-b-S) brushes showed stimulus response to a selective solvent and various nanopatterns were observed according to the composition of the block copolymer.
- Published
- 2011
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46. Cloning and sequence analysis of partial genomic DNA coding for HtrA-type serine protease of Wolbachia from human lymphatic filarial parasite, Wuchereria bancrofti.
- Author
-
Dhamodharan R, Hoti S, Sivapragasam G, and Das M
- Abstract
Background: Periplasmic serine proteases of HtrA type of Wolbachia have been shown to play a role in the pathogenesis of filarial disease., Aims: This study was aimed to sequence Wb-HtrA serine protease and analyze its phylogenetic position by comparing with other filarial and non-filarial nematode homologs., Materials and Methods: Partial HtrA gene fragment was amplified from DNA isolated from periodic and sub-periodic Wuchereria bancrofti parasites collected from Pondicherry and Nicobar islands, respectively. The amplicons were sequenced, and sequence homology and phylogenetic relationship with other filarial and non-filarial nematodes were analyzed., Results: Partial orthologue of HtrA-type serine protease from Wolbachia of W. bancrofti was amplified, cloned and sequenced. The deduced amino acid sequence exhibited 87%, 81% and 74% identity with the homologous Wolbachia proteases identified from Brugia malayi, Onchocerca volvulus and Drosophila melanogaster, respectively. The Wb-HtrA has arthologues in several proteobacteria with very high homology and hence is highly conserved not only among Wolbachia of filarial parasites but also across proteobacteria. The phylogenetic tree constructed using Neighbor-Joining method showed two main clusters: cluster-I containing bacteria that dwell in diverse habitats such as soil, fresh and marine waters and plants and cluster-II comprising Anaplasma sp. and Erlichia, and Wolbachia endosymbionts of insects and nematodes, in distinct groups., Conclusions: HtrA-type serine protease from Wolbachia of W. bancrofti is highly conserved among filarial parasites. It will be of interest to know whether filarial Wolbachia HtrA type of serine protease might influence apoptosis and lymphatic epithelium, thereby playing a role in the filarial pathogenesis. Such information will be useful for identifying targets for the development of newer drugs for filariasis treatment, especially for preventing lymphatic pathology.
- Published
- 2011
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47. Molecular differentiation of nocturnally periodic and diurnally sub-periodic Wuchereria bancrofti by Randomly Amplified Polymorphic DNA (RAPD).
- Author
-
Das MK, Dhamodharan R, Hoti SL, and Dash AP
- Abstract
Wuchereria bancrofti, a nematode parasite, is responsible for causing 90% of lymphatic filariasis infection in the world. In India, W. bancrofti exists in two physiological forms, nocturnally periodic in the main land and diurnally sub-periodic in Car Nicobar group of islands. Differentiation of these two parasitic forms by conventional microscopic methods difficult requiring good skill and hence tedious. Therefore, we developed a simple and rapid Random Amplified Polymorphic DNA (RAPD) assay to differentiate these parasitic forms. Also, the phylogenetic relationship between periodic and sub-periodic W. bancrofti and also Brugia malayi populations was analyzed using RAPD profile generated. Distinct RAPD profiles were observed among the three parasites with the formation of three distinct clusters in the phylogenetic tree. Substantial genetic diversity (Nei's genetic diversity H) was observed among periodic (H = 0.0577) and sub-periodic (H = 0.1415) W. bancrofti populations.
- Published
- 2011
- Full Text
- View/download PDF
48. 3-(9H-Carbazol-9-yl)propan-1-ol.
- Author
-
Haridharan N, Ramkumar V, and Dhamodharan R
- Abstract
In the title compound, C(15)H(15)NO, the dihedral angle between the benzene rings is 2.25 (2)°. The C-C-C-O atoms of the propanol side chain are in a gauche conformation [torsion angle = -60.5 (2)°]. In the crystal, O-H⋯O hydrogen bonds link the mol-ecules into C(2) chains propagating in [100]. The O-bonded H atom is disordered over two sites of equal occupancy.
- Published
- 2010
- Full Text
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49. 2-Bromo-2-methyl-N-(4-methyl-2-oxo-2H-chromen-7-yl)propanamide.
- Author
-
Haridharan N, Ramkumar V, and Dhamodharan R
- Abstract
In the title compound C(14)H(14)BrNO(3), the coumarin ring system is almost planar (r.m.s. deviation = 0.008 Å) and an intra-molecular C-H⋯O inter-action generates an S(6) ring. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds, with the C=O unit of the coumarin ring system acting as the acceptor group, generating [010] C(8) chains. The chain connectivity is reinforced by two C-H⋯O inter-actions.
- Published
- 2010
- Full Text
- View/download PDF
50. 2-Oxo-4-trifluoro-meth-yl-2H-chromen-7-yl 2-bromo-2-methyl-propano-ate.
- Author
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Haridharan N, Ramkumar V, and Dhamodharan R
- Abstract
In the title compound, C(14)H(10)BrF(3)O(4), the coumarin ring system is almost plannar (r.m.s. deviation = 0.025 Å) and a short C-H⋯F contact occurs. The propano-ate fragment is orientated almost perpendicular to the ring [dihedral angle = 71.80 (12)°]. In the crystal, mol-ecules are linked by C-H⋯O hydrogen bonds, generating [100] chains.
- Published
- 2010
- Full Text
- View/download PDF
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