74 results on '"Pennington DJ"'
Search Results
2. Signatures of inflammation and impending multiple organ dysfunction in the hyperacute phase of trauma: A prospective cohort study
- Author
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Cabrera, CP, Manson, J, Shepherd, JM, Torrance, HD, Watson, D, Longhi, MP, Hoti, M, Patel, MB, O'Dwyer, M, Nourshargh, S, Pennington, DJ, Barnes, MR, and Brohi, K
- Subjects
Adult ,Male ,Time Factors ,Critical Care and Emergency Medicine ,Neutrophils ,Multiple Organ Failure ,Immune Cells ,Immunology ,Gene Expression ,Pathology and Laboratory Medicine ,Research and Analysis Methods ,White Blood Cells ,Signs and Symptoms ,Spectrum Analysis Techniques ,Diagnostic Medicine ,Animal Cells ,London ,Medicine and Health Sciences ,Genetics ,Humans ,Prospective Studies ,Immune Response ,Trauma Medicine ,Inflammation ,Blood Cells ,Correction ,Biology and Life Sciences ,Computational Biology ,Genomics ,Cell Biology ,Middle Aged ,Genome Analysis ,Flow Cytometry ,Spectrophotometry ,Acute Disease ,Medicine ,Wounds and Injuries ,Multiple Organ Dysfunction Syndrome ,Female ,Cytophotometry ,Cellular Types ,Transcriptome ,Transcriptome Analysis ,Traumatic Injury ,Blood Chemical Analysis ,Research Article - Abstract
Background Severe trauma induces a widespread response of the immune system. This “genomic storm” can lead to poor outcomes, including Multiple Organ Dysfunction Syndrome (MODS). MODS carries a high mortality and morbidity rate and adversely affects long-term health outcomes. Contemporary management of MODS is entirely supportive, and no specific therapeutics have been shown to be effective in reducing incidence or severity. The pathogenesis of MODS remains unclear, and several models are proposed, such as excessive inflammation, a second-hit insult, or an imbalance between pro- and anti-inflammatory pathways. We postulated that the hyperacute window after trauma may hold the key to understanding how the genomic storm is initiated and may lead to a new understanding of the pathogenesis of MODS. Methods and findings We performed whole blood transcriptome and flow cytometry analyses on a total of 70 critically injured patients (Injury Severity Score [ISS] ≥ 25) at The Royal London Hospital in the hyperacute time period within 2 hours of injury. We compared transcriptome findings in 36 critically injured patients with those of 6 patients with minor injuries (ISS ≤ 4). We then performed flow cytometry analyses in 34 critically injured patients and compared findings with those of 9 healthy volunteers. Immediately after injury, only 1,239 gene transcripts (4%) were differentially expressed in critically injured patients. By 24 hours after injury, 6,294 transcripts (21%) were differentially expressed compared to the hyperacute window. Only 202 (16%) genes differentially expressed in the hyperacute window were still expressed in the same direction at 24 hours postinjury. Pathway analysis showed principally up-regulation of pattern recognition and innate inflammatory pathways, with down-regulation of adaptive responses. Immune deconvolution, flow cytometry, and modular analysis suggested a central role for neutrophils and Natural Killer (NK) cells, with underexpression of T- and B cell responses. In the transcriptome cohort, 20 critically injured patients later developed MODS. Compared with the 16 patients who did not develop MODS (NoMODS), maximal differential expression was seen within the hyperacute window. In MODS versus NoMODS, 363 genes were differentially expressed on admission, compared to only 33 at 24 hours postinjury. MODS transcripts differentially expressed in the hyperacute window showed enrichment among diseases and biological functions associated with cell survival and organismal death rather than inflammatory pathways. There was differential up-regulation of NK cell signalling pathways and markers in patients who would later develop MODS, with down-regulation of neutrophil deconvolution markers. This study is limited by its sample size, precluding more detailed analyses of drivers of the hyperacute response and different MODS phenotypes, and requires validation in other critically injured cohorts. Conclusions In this study, we showed how the hyperacute postinjury time window contained a focused, specific signature of the response to critical injury that led to widespread genomic activation. A transcriptomic signature for later development of MODS was present in this hyperacute window; it showed a strong signal for cell death and survival pathways and implicated NK cells and neutrophil populations in this differential response., In a prospective cohort study, Joanna Shepherd and colleagues use whole blood transcriptome and flow cytometry analyses to identify cell populations and genes associated with a focused immune response very early after injury that develops into a widespread immune dysregulation and multiple organ dysfunction., Author summary Why was this study done? Multiple Organ Dysfunction Syndrome (MODS) is common in patients who survive critical injuries and is associated with poor patient outcomes, including death, infection, and prolonged critical care admission. MODS describes a failure of multiple organ systems (including lung, heart, kidney, and liver), and an excessive or dysfunctional immune response has been implicated in its development after trauma. The precise immune mechanisms leading to MODS are not fully understood, but the first minutes to hours after severe injury are likely to be pivotal to the development of a “normal” or “dysregulated” immune response. Our study was designed to investigate the very early immune responses to critical injury to determine whether a specific immune reaction occurs in the hyperacute timeframe that leads to widespread dysregulation and MODS. What did the researchers do and find? We studied 29,385 immune cell genes within whole blood samples obtained from 36 critically injured patients at admission (within 2 hours of injury) and compared these to samples obtained at 24 and 72 hours following injury. We analysed the differences between critically injured patient who developed MODS and those who did not and compared these to 6 patients who had minor injuries. We also used flow cytometry to analyse the numbers of circulating immune cell populations in 34 critically injured patients and compared these to healthy volunteers. Our study identified only 1,239 (4%) immune cell genes that were different between critical and control patients at admission; however, this subsequently developed into a widespread reaction by 24 hours postinjury. Comparing patients with MODS to those without MODS, we found 363 genes were different at admission, but by 24 hours postinjury, only 33 genes differentiated between the groups. Further analysis of the hyperacute timeframe demonstrated enrichment of gene pathways associated with cell death in patients with MODS and implicated neutrophils and natural killer immune cells in this response. What do these findings mean? The hyperacute timeframe is crucial to understanding the immune response to trauma and how this subsequently develops into MODS. There is a focused immune response to trauma in the hyperacute timeframe, which subsequently develops into a widespread immune reaction. The MODS signal was strongest in the hyperacute window and implicated cell death pathways and innate immune cells in this response.
- Published
- 2017
3. IFN gamma Regulates Activated V delta 2+T Cells through a Feedback Mechanism Mediated by Mesenchymal Stem Cells
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Fechter, K, Dorronsoro, A, Jakobsson, E, Ferrin, I, Lang, V, Sepulveda, P, Pennington, DJ, and Trigueros, C
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DELTA T-CELLS ,LYMPHOCYTE-PROLIFERATION ,INTERFERON-GAMMA ,STROMAL CELLS ,ENCEPHALOMYELITIS ,CYTOTOXICITY ,DENDRITIC CELLS ,INDOLEAMINE 2,3-DIOXYGENASE ,CYTOKINE ANALYSIS ,RESPONSES - Abstract
gamma delta T cells play a role in a wide range of diseases such as autoimmunity and cancer. The majority of circulating human gamma delta T lymphocytes express a V gamma 9V delta 2+ (V delta 2+) T cell receptor (TCR) and following activation release pro-inflammatory cytokines. In this study, we show that IFN gamma, produced by V delta 2+ cells, activates mesenchymal stem cell (MSC)-mediated immunosupression, which in turn exerts a negative feedback mechanism on gamma delta T cell function ranging from cytokine production to proliferation. Importantly, this modulatory effect is limited to a short period of time (
- Published
- 2017
4. Imaging of the Urinary Tract in Children
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Zerin Jm and Pennington Dj
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Diagnostic Imaging ,Male ,medicine.medical_specialty ,Pyelonephritis ,business.industry ,Urinary system ,Urology ,Urography ,Hydronephrosis ,Magnetic Resonance Imaging ,Child, Preschool ,Urinary Tract Infections ,Pediatrics, Perinatology and Child Health ,medicine ,Humans ,Female ,Child ,Radionuclide Imaging ,business ,Ultrasonography - Published
- 1999
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5. Regulation of human bone marrow stromal cell proliferation and differentiation capacity by glucocorticoid receptor and AP-1 crosstalk
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Cárcamo-Orive I, Gaztelumendi A, Delgado J, Tejados N, Dorronsoro A, Fernández-Rueda J, Pennington DJ, and Trigueros C
- Abstract
Although marrow adipocytes and osteoblasts derive from a common bone marrow stromal cells (BMSCs), the mechanisms that underlie osteoporosis-associated bone loss and marrow adipogenesis during prolonged steroid treatment are unclear. We show in human BMSCs (hBMSCs) that glucocorticoid receptor (GR) signaling in response to high concentrations of glucocorticoid (GC) supports adipogenesis but inhibits osteogenesis by reducing c-Jun expression and hBMSC proliferation. Conversely, significantly lower concentrations of GC, which permit hBMSC proliferation, are necessary for normal bone mineralization. In contrast, platelet-derived growth factor (PDGF) signaling increases both JNK/c-Jun activity and hBMSC expansion, favoring osteogenic differentiation instead of adipogenesis. Indeed, PDGF antagonizes the proadipogenic qualities of GC/GR signaling. Thus our results reveal a novel c-Jun-centered regulatory network of signaling pathways in differentiating hBMSCs that controls the proliferation-dependent balance between osteogenesis and adipogenesis.
- Published
- 2010
6. IL-27 maintains cytotoxic Ly6C + γδ T cells that arise from immature precursors.
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Wiesheu R, Edwards SC, Hedley A, Hall H, Tosolini M, Fares da Silva MGF, Sumaria N, Castenmiller SM, Wardak L, Optaczy Y, Lynn A, Hill DG, Hayes AJ, Hay J, Kilbey A, Shaw R, Whyte D, Walsh PJ, Michie AM, Graham GJ, Manoharan A, Halsey C, Blyth K, Wolkers MC, Miller C, Pennington DJ, Jones GW, Fournie JJ, Bekiaris V, and Coffelt SB
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- Animals, Mice, Humans, Interferon-gamma metabolism, Interferon-gamma immunology, Interleukin-27 metabolism, Interleukin-27 genetics, Cell Differentiation immunology, Mice, Inbred C57BL, T-Lymphocytes, Cytotoxic immunology, T-Lymphocytes, Cytotoxic metabolism, Antigens, Ly metabolism, Antigens, Ly genetics, Tumor Necrosis Factor Receptor Superfamily, Member 7 metabolism, Tumor Necrosis Factor Receptor Superfamily, Member 7 genetics, Tumor Necrosis Factor Receptor Superfamily, Member 7 immunology, Receptors, Antigen, T-Cell, gamma-delta metabolism, Receptors, Antigen, T-Cell, gamma-delta immunology, Receptors, Antigen, T-Cell, gamma-delta genetics
- Abstract
In mice, γδ-T lymphocytes that express the co-stimulatory molecule, CD27, are committed to the IFNγ-producing lineage during thymic development. In the periphery, these cells play a critical role in host defense and anti-tumor immunity. Unlike αβ-T cells that rely on MHC-presented peptides to drive their terminal differentiation, it is unclear whether MHC-unrestricted γδ-T cells undergo further functional maturation after exiting the thymus. Here, we provide evidence of phenotypic and functional diversity within peripheral IFNγ-producing γδ T cells. We found that CD27
+ Ly6C- cells convert into CD27+ Ly6C+ cells, and these CD27+ Ly6C+ cells control cancer progression in mice, while the CD27+ Ly6C- cells cannot. The gene signatures of these two subsets were highly analogous to human immature and mature γδ-T cells, indicative of conservation across species. We show that IL-27 supports the cytotoxic phenotype and function of mouse CD27+ Ly6C+ cells and human Vδ2+ cells, while IL-27 is dispensable for mouse CD27+ Ly6C- cell and human Vδ1+ cell functions. These data reveal increased complexity within IFNγ-producing γδ-T cells, comprising immature and terminally differentiated subsets, that offer new insights into unconventional T-cell biology., (© 2024. The Author(s).)- Published
- 2024
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7. Perinatal thymic-derived CD8αβ-expressing γδ T cells are innate IFN-γ producers that expand in IL-7R-STAT5B-driven neoplasms.
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Sumaria N, Fiala GJ, Inácio D, Curado-Avelar M, Cachucho A, Pinheiro R, Wiesheu R, Kimura S, Courtois L, Blankenhaus B, Darrigues J, Suske T, Almeida ARM, Minguet S, Asnafi V, Lhermitte L, Mullighan CG, Coffelt SB, Moriggl R, Barata JT, Pennington DJ, and Silva-Santos B
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- Animals, Mice, Humans, Signal Transduction immunology, Mice, Inbred C57BL, CD8-Positive T-Lymphocytes immunology, Mice, Knockout, Receptors, Antigen, T-Cell, alpha-beta metabolism, Receptors, Antigen, T-Cell, alpha-beta genetics, CD8 Antigens metabolism, Female, Intraepithelial Lymphocytes immunology, Intraepithelial Lymphocytes metabolism, Interleukin-7 metabolism, Interferon-gamma metabolism, Interferon-gamma immunology, Receptors, Antigen, T-Cell, gamma-delta metabolism, Receptors, Antigen, T-Cell, gamma-delta immunology, Thymus Gland immunology, Receptors, Interleukin-7 metabolism, Immunity, Innate, STAT5 Transcription Factor metabolism
- Abstract
The contribution of γδ T cells to immune responses is associated with rapid secretion of interferon-γ (IFN-γ). Here, we show a perinatal thymic wave of innate IFN-γ-producing γδ T cells that express CD8αβ heterodimers and expand in preclinical models of infection and cancer. Optimal CD8αβ
+ γδ T cell development is directed by low T cell receptor signaling and through provision of interleukin (IL)-4 and IL-7. This population is pathologically relevant as overactive, or constitutive, IL-7R-STAT5B signaling promotes a supraphysiological accumulation of CD8αβ+ γδ T cells in the thymus and peripheral lymphoid organs in two mouse models of T cell neoplasia. Likewise, CD8αβ+ γδ T cells define a distinct subset of human T cell acute lymphoblastic leukemia pediatric patients. This work characterizes the normal and malignant development of CD8αβ+ γδ T cells that are enriched in early life and contribute to innate IFN-γ responses to infection and cancer., (© 2024. The Author(s).)- Published
- 2024
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8. Versican Associates with Tumor Immune Phenotype and Limits T-cell Trafficking via Chondroitin Sulfate.
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Hirani P, McDermott J, Rajeeve V, Cutillas PR, Jones JL, Pennington DJ, Wight TN, Santamaria S, Alonge KM, and Pearce OMT
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- Humans, CD8-Positive T-Lymphocytes metabolism, Chondroitin Sulfates, Phenotype, Tumor Microenvironment, Animals, Neoplasms, Versicans chemistry
- Abstract
Immunotherapies for cancers of epithelial origin have limited efficacy, and a growing body of evidence links the composition of extracellular matrix (ECM) with the likelihood of a favorable response to treatment. The ECM may be considered an immunologic barrier, restricting the localization of cytotoxic immune cells to stromal areas and inhibiting their contact with tumor cells. Identifying ECM components of this immunologic barrier could provide targets that whether degraded in situ may support antitumor immunity and improve immunotherapy response. Using a library of primary triple-negative breast cancer tissues, we correlated CD8+ T-cell tumor contact with ECM composition and identified a proteoglycan, versican (VCAN), as a putative member of the immunologic barrier. Our analysis reveals that CD8+ T-cell contact with tumor associates with the location of VCAN expression, the specific glycovariant of VCAN [defined through the pattern of posttranslational attachments of glycosaminoglycans (GAG)], and the cell types that produce the variant. In functional studies, the isomers of chondroitin sulfate presented on VCAN have opposing roles being either supportive or inhibiting of T-cell trafficking, and removal of the GAGs ameliorates these effects on T-cell trafficking. Overall, we conclude that VCAN can either support or inhibit T-cell trafficking within the tumor microenvironment depending on the pattern of GAGs present, and that VCAN is a major component of the ECM immunologic barrier that defines the type of response to immunotherapy., Significance: The response to immunotherapy has been poor toward solid tumors despite immune cells infiltrating into the tumor. The ECM has been associated with impacting T-cell infiltration toward the tumor and in this article we have identified VCAN and its structural modification, chondroitin sulfate as having a key role in T-cell invasion., (© 2024 The Authors; Published by the American Association for Cancer Research.)
- Published
- 2024
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9. Investigating iRHOM2-Associated Transcriptional Changes in Tylosis With Esophageal Cancer.
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Murtough S, Babu D, Webb CM, Louis Dit Picard H, McGinty LA, Chao-Chu J, Pink R, Silver AR, Smart HL, Field JK, Woodland P, Risk JM, Blaydon DC, Pennington DJ, and Kelsell DP
- Abstract
Background and Aims: Survival rates for esophageal squamous cell carcinoma (ESCC) are extremely low due to the late diagnosis of most cases. An understanding of the early molecular processes that lead to ESCC may facilitate opportunities for early diagnosis; however, these remain poorly defined. Tylosis with esophageal cancer (TOC) is a rare syndrome associated with a high lifetime risk of ESCC and germline mutations in RHBDF2 , encoding iRhom2. Using TOC as a model of ESCC predisposition, this study aimed to identify early-stage transcriptional changes in ESCC development., Methods: Esophageal biopsies were obtained from control and TOC individuals, the latter undergoing surveillance endoscopy, and adjacent diagnostic biopsies were graded as having no dysplasia or malignancy. Bulk RNA-Seq was performed, and findings were compared with sporadic ESCC vs normal RNA-Seq datasets., Results: Multiple transcriptional changes were identified in TOC samples, relative to controls, and many were detected in ESCC. Accordingly, pathway analyses predicted an enrichment of cancer-associated processes linked to cellular proliferation and metastasis, and several transcription factors were predicted to be associated with TOC and ESCC, including negative enrichment of GRHL2. Subsequently, a filtering strategy revealed 22 genes that were significantly dysregulated in both TOC and ESCC. Moreover, Keratin 17, which was upregulated in TOC and ESCC, was also found to be overexpressed at the protein level in 'normal' TOC esophagus tissue., Conclusion: Transcriptional changes occur in TOC esophagus prior to the onset of dysplasia, many of which are associated with ESCC. These findings support the utility of TOC to help reveal the early molecular processes that lead to sporadic ESCC., (© 2024 The Authors.)
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- 2023
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10. Deep characterization of human γδ T cell subsets defines shared and lineage-specific traits.
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Sanz M, Mann BT, Ryan PL, Bosque A, Pennington DJ, Hackstein H, and Soriano-Sarabia N
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- Humans, T-Lymphocyte Subsets, Receptors, Antigen, T-Cell, gamma-delta metabolism, Phenotype, Intraepithelial Lymphocytes metabolism, Neoplasms metabolism
- Abstract
Under non-pathological conditions, human γδ T cells represent a small fraction of CD3
+ T cells in peripheral blood (1-10%). They constitute a unique subset of T lymphocytes that recognize stress ligands or non-peptide antigens through MHC-independent presentation. Major human γδ T cell subsets, Vδ1 and Vδ2, expand in response to microbial infection or malignancy, but possess distinct tissue localization, antigen recognition, and effector responses. We hypothesized that differences at the gene, phenotypic, and functional level would provide evidence that γδ T cell subpopulations belong to distinct lineages. Comparisons between each subset and the identification of the molecular determinants that underpin their differences has been hampered by experimental challenges in obtaining sufficient numbers of purified cells. By utilizing a stringent FACS-based isolation method, we compared highly purified human Vδ1 and Vδ2 cells in terms of phenotype, gene expression profile, and functional responses. We found distinct genetic and phenotypic signatures that define functional differences in γδ T cell populations. Differences in TCR components, repertoire, and responses to calcium-dependent pathways suggest that Vδ1 and Vδ2 T cells are different lineages. These findings will facilitate further investigation into the ligand specificity and unique role of Vδ1 and Vδ2 cells in early immune responses., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Sanz, Mann, Ryan, Bosque, Pennington, Hackstein and Soriano-Sarabia.)- Published
- 2023
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11. Decosus: An R Framework for Universal Integration of Cell Proportion Estimation Methods.
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Anene CA, Taggart E, Harwood CA, Pennington DJ, and Wang J
- Abstract
The assessment of the cellular heterogeneity and abundance in bulk tissue samples is essential for characterising cellular and organismal states. Computational approaches to estimate cellular abundance from bulk RNA-Seq datasets have variable performances, often requiring benchmarking matrices to select the best performing methods for individual studies. However, such benchmarking investigations are difficult to perform and assess in typical applications because of the absence of gold standard/ground-truth cellular measurements. Here we describe Decosus, an R package that integrates seven methods and signatures for deconvoluting cell types from gene expression profiles (GEP). Benchmark analysis on a range of datasets with ground-truth measurements revealed that our integrated estimates consistently exhibited stable performances across datasets than individual methods and signatures. We further applied Decosus to characterise the immune compartment of skin samples in different settings, confirming the well-established Th1 and Th2 polarisation in psoriasis and atopic dermatitis, respectively. Secondly, we revealed immune system-related UV-induced changes in sun-exposed skin. Furthermore, a significant motivation in the design of Decosus is flexibility and the ability for the user to include new gene signatures, algorithms, and integration methods at run time., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Anene, Taggart, Harwood, Pennington and Wang.)
- Published
- 2022
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12. Early inflammation precedes cardiac fibrosis and heart failure in desmoglein 2 murine model of arrhythmogenic cardiomyopathy.
- Author
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Ng KE, Delaney PJ, Thenet D, Murtough S, Webb CM, Zaman N, Tsisanova E, Mastroianni G, Walker SLM, Westaby JD, Pennington DJ, Pink R, Kelsell DP, and Tinker A
- Subjects
- Animals, Disease Models, Animal, Humans, Inflammation pathology, Mice, Arrhythmias, Cardiac immunology, Cardiomyopathies immunology, Desmoglein 2 metabolism, Fibrosis physiopathology, Heart Failure physiopathology, Inflammation complications
- Abstract
The study of a desmoglein 2 murine model of arrhythmogenic cardiomyopathy revealed cardiac inflammation as a key early event leading to fibrosis. Arrhythmogenic cardiomyopathy (AC) is an inherited heart muscle disorder leading to ventricular arrhythmias and heart failure due to abnormalities in the cardiac desmosome. We examined how loss of desmoglein 2 (Dsg2) in the young murine heart leads to development of AC. Apoptosis was an early cellular phenotype, and RNA sequencing analysis revealed early activation of inflammatory-associated pathways in Dsg2-null (Dsg2
-/- ) hearts at postnatal day 14 (2 weeks) that were absent in the fibrotic heart of adult mice (10 weeks). This included upregulation of iRhom2/ADAM17 and its associated pro-inflammatory cytokines and receptors such as TNFα, IL6R and IL-6. Furthermore, genes linked to specific macrophage populations were also upregulated. This suggests cardiomyocyte stress triggers an early immune response to clear apoptotic cells allowing tissue remodelling later on in the fibrotic heart. Our analysis at the early disease stage suggests cardiac inflammation is an important response and may be one of the mechanisms responsible for AC disease progression., (© 2021. Crown.)- Published
- 2021
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13. Constrained TCRγδ-associated Syk activity engages PI3K to facilitate thymic development of IL-17A-secreting γδ T cells.
- Author
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Sumaria N, Martin S, and Pennington DJ
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- Animals, Mice, Mice, Inbred C57BL, Phosphatidylinositol 3-Kinase, Phosphatidylinositol 3-Kinases genetics, T-Lymphocytes, Interleukin-17 genetics, Receptors, Antigen, T-Cell, gamma-delta genetics
- Abstract
Murine γδ
17 cells, which are T cells that bear the γδ T cell receptor (TCRγδ) and secrete interleukin-17A (IL-17A), are generated in the thymus and are critical for various immune responses. Although strong TCRγδ signals are required for the development of interferon-γ (IFN-γ)-secreting γδ cells (γδIFN cells), the generation of γδ17 cells requires weaker TCRγδ signaling. Here, we demonstrated that constrained activation of the kinase Syk downstream of TCRγδ was required for the thymic development of γδ17 cells. Increasing or decreasing Syk activity by stimulating TCRγδ or inhibiting Syk, respectively, substantially reduced γδ17 cell numbers. This delimited Syk activity optimally engaged the phosphoinositide 3-kinase (PI3K)-Akt signaling pathway, which maintained the expression of master regulators of the IL-17 program, RORγt and c-Maf. Inhibition of PI3K not only abrogated γδ17 cell development but also augmented the development of a distinct, previously undescribed subset of γδ T cells. These CD8+ Ly6a+ γδ T cells had a type-I IFN gene expression signature and expanded in response to stimulation with IFN-β. Collectively, these studies elucidate how weaker TCRγδ signaling engages distinct signaling pathways to specify the γδ17 cell fate and identifies a role for type-I IFNs in γδ T cell development., (Copyright © 2021 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)- Published
- 2021
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14. Aging-induced isoDGR-modified fibronectin activates monocytic and endothelial cells to promote atherosclerosis.
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Park JE, JebaMercy G, Pazhanchamy K, Guo X, Ngan SC, Liou KCK, Lynn SE, Ng SS, Meng W, Lim SC, Leow MK, Richards AM, Pennington DJ, de Kleijn DPV, Sorokin V, Ho HH, McCarthy NE, and Sze SK
- Subjects
- Aging, Animals, Cell Adhesion, Endothelial Cells, Fibronectins, Humans, Mice, Protein D-Aspartate-L-Isoaspartate Methyltransferase, Atherosclerosis, Monocytes
- Abstract
Background and Aims: Aging is the primary risk factor for cardiovascular disease (CVD), but the mechanisms underlying age-linked atherosclerosis remain unclear. We previously observed that long-lived vascular matrix proteins can acquire 'gain-of-function' isoDGR motifs that might play a role in atherosclerotic pathology., Methods: IsoDGR-specific mAb were generated and used for ELISA-based measurement of motif levels in plasma samples from patients with coronary artery diseases (CAD) and non-CAD controls. Functional consequences of isoDGR accumulation in age-damaged fibronectin were determined by bioassay for capacity to activate monocytes, macrophages, and endothelial cells (signalling activity, pro-inflammatory cytokine expression, and recruitment/adhesion potential). Mice deficient in the isoDGR repair enzyme PCMT1 were used to assess motif distribution and macrophage localisation in vivo., Results: IsoDGR-modified fibronectin and fibrinogen levels in patient plasma were significantly enhanced in CAD and further associated with smoking status. Functional assays demonstrated that isoDGR-modified fibronectin activated both monocytes and macrophages via integrin receptor 'outside in' signalling, triggering an ERK:AP-1 cascade and expression of pro-inflammatory cytokines MCP-1 and TNFα to drive additional recruitment of circulating leukocytes. IsoDGR-modified fibronectin also induced endothelial cell expression of integrin β1 to further enhance cellular adhesion and matrix deposition. Analysis of murine aortic tissues confirmed accumulation of isoDGR-modified proteins co-localised with CD68
+ macrophages in vivo., Conclusions: Age-damaged fibronectin features isoDGR motifs that increase binding to integrins on the surface of monocytes, macrophages, and endothelial cells. Subsequent activation of 'outside-in' signalling elicits a range of potent cytokines and chemokines that drive additional leukocyte recruitment to the developing atherosclerotic matrix., (Copyright © 2021 Elsevier B.V. All rights reserved.)- Published
- 2021
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15. iRHOM2: A Regulator of Palmoplantar Biology, Inflammation, and Viral Susceptibility.
- Author
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Chao-Chu J, Murtough S, Zaman N, Pennington DJ, Blaydon DC, and Kelsell DP
- Subjects
- ADAM17 Protein metabolism, Animals, Carrier Proteins genetics, Carrier Proteins metabolism, Dermatitis genetics, Disease Models, Animal, Epidermis immunology, Esophageal Neoplasms immunology, Esophageal Neoplasms pathology, Foot, Gene Expression Regulation immunology, Hand, Host Microbial Interactions genetics, Host Microbial Interactions immunology, Humans, Intracellular Signaling Peptides and Proteins metabolism, Keratinocytes immunology, Keratinocytes metabolism, Keratins metabolism, Keratoderma, Palmoplantar immunology, Keratoderma, Palmoplantar pathology, Mice, Mice, Knockout, Mutation, Signal Transduction genetics, Signal Transduction immunology, Skin Diseases, Viral genetics, Skin Diseases, Viral virology, Transcription Factors metabolism, Tumor Suppressor Proteins metabolism, Dermatitis immunology, Epidermis pathology, Esophageal Neoplasms genetics, Intracellular Signaling Peptides and Proteins genetics, Keratoderma, Palmoplantar genetics, Skin Diseases, Viral immunology
- Abstract
The palmoplantar epidermis is a specialized area of the skin that undergoes high levels of mechanical stress. The palmoplantar keratinization and esophageal cancer syndrome, tylosis with esophageal cancer, is linked to mutations in RHBDF2 encoding the proteolytically inactive rhomboid protein, iRhom2. Subsequently, iRhom2 was found to affect palmoplantar thickening to modulate the stress keratin response and to mediate context-dependent stress pathways by p63. iRhom2 is also a direct regulator of the sheddase, ADAM17, and the antiviral adaptor protein, stimulator of IFN genes. In this perspective, the pleiotropic functions of iRhom2 are discussed with respect to the skin, inflammation, and the antiviral response., (Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2021
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16. Distinct metabolic programs established in the thymus control effector functions of γδ T cell subsets in tumor microenvironments.
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Lopes N, McIntyre C, Martin S, Raverdeau M, Sumaria N, Kohlgruber AC, Fiala GJ, Agudelo LZ, Dyck L, Kane H, Douglas A, Cunningham S, Prendeville H, Loftus R, Carmody C, Pierre P, Kellis M, Brenner M, Argüello RJ, Silva-Santos B, Pennington DJ, and Lynch L
- Subjects
- Animals, Breast Neoplasms immunology, Breast Neoplasms pathology, Breast Neoplasms therapy, Cell Line, Tumor, Cell Lineage, Colonic Neoplasms immunology, Colonic Neoplasms pathology, Colonic Neoplasms therapy, Female, Glucose metabolism, Glycolysis, Humans, Immunotherapy, Adoptive, Interferon-gamma metabolism, Interleukin-17 metabolism, Lipid Metabolism, Lymphocytes, Tumor-Infiltrating immunology, Lymphocytes, Tumor-Infiltrating transplantation, Melanoma, Experimental immunology, Melanoma, Experimental pathology, Melanoma, Experimental therapy, Mice, Inbred C57BL, Mice, Transgenic, Mitochondria metabolism, Obesity immunology, Obesity metabolism, Organ Culture Techniques, Phenotype, Signal Transduction, T-Lymphocyte Subsets immunology, T-Lymphocyte Subsets transplantation, Thymus Gland immunology, Tumor Burden, Mice, Breast Neoplasms metabolism, Colonic Neoplasms metabolism, Energy Metabolism, Lymphocytes, Tumor-Infiltrating metabolism, Melanoma, Experimental metabolism, Receptors, Antigen, T-Cell, gamma-delta metabolism, T-Lymphocyte Subsets metabolism, Thymus Gland metabolism, Tumor Microenvironment
- Abstract
Metabolic programming controls immune cell lineages and functions, but little is known about γδ T cell metabolism. Here, we found that γδ T cell subsets making either interferon-γ (IFN-γ) or interleukin (IL)-17 have intrinsically distinct metabolic requirements. Whereas IFN-γ
+ γδ T cells were almost exclusively dependent on glycolysis, IL-17+ γδ T cells strongly engaged oxidative metabolism, with increased mitochondrial mass and activity. These distinct metabolic signatures were surprisingly imprinted early during thymic development and were stably maintained in the periphery and within tumors. Moreover, pro-tumoral IL-17+ γδ T cells selectively showed high lipid uptake and intracellular lipid storage and were expanded in obesity and in tumors of obese mice. Conversely, glucose supplementation enhanced the antitumor functions of IFN-γ+ γδ T cells and reduced tumor growth upon adoptive transfer. These findings have important implications for the differentiation of effector γδ T cells and their manipulation in cancer immunotherapy.- Published
- 2021
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17. Deep Sequencing of B Cell Receptor Repertoires From COVID-19 Patients Reveals Strong Convergent Immune Signatures.
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Galson JD, Schaetzle S, Bashford-Rogers RJM, Raybould MIJ, Kovaltsuk A, Kilpatrick GJ, Minter R, Finch DK, Dias J, James LK, Thomas G, Lee WJ, Betley J, Cavlan O, Leech A, Deane CM, Seoane J, Caldas C, Pennington DJ, Pfeffer P, and Osbourn J
- Subjects
- B-Lymphocytes immunology, COVID-19 immunology, Female, High-Throughput Nucleotide Sequencing, Humans, Lymphopenia immunology, Male, Middle Aged, Spike Glycoprotein, Coronavirus immunology, Antibodies, Neutralizing immunology, Antibodies, Viral immunology, COVID-19 pathology, Receptors, Antigen, B-Cell genetics, SARS-CoV-2 immunology
- Abstract
Deep sequencing of B cell receptor (BCR) heavy chains from a cohort of 31 COVID-19 patients from the UK reveals a stereotypical naive immune response to SARS-CoV-2 which is consistent across patients. Clonal expansion of the B cell population is also observed and may be the result of memory bystander effects. There was a strong convergent sequence signature across patients, and we identified 1,254 clonotypes convergent between at least four of the COVID-19 patients, but not present in healthy controls or individuals following seasonal influenza vaccination. A subset of the convergent clonotypes were homologous to known SARS and SARS-CoV-2 spike protein neutralizing antibodies. Convergence was also demonstrated across wide geographies by comparison of data sets between patients from UK, USA, and China, further validating the disease association and consistency of the stereotypical immune response even at the sequence level. These convergent clonotypes provide a resource to identify potential therapeutic and prophylactic antibodies and demonstrate the potential of BCR profiling as a tool to help understand patient responses., Competing Interests: JO, AL, OC, SS, JG, JD, RM, and DF are employees of Alchemab Therapeutics Limited. RB-R is a founder of and consultant to Alchemab Therapeutics Limited. GK is a consultant to Alchemab Therapeutics Limited. CC is a member of the AstraZeneca External Science Panel and has research grants from Roche, Genentech, AstraZeneca, and Servier that are administered by the University of Cambridge. JB was employed by Illumina, Inc. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2020 Galson, Schaetzle, Bashford-Rogers, Raybould, Kovaltsuk, Kilpatrick, Minter, Finch, Dias, James, Thomas, Lee, Betley, Cavlan, Leech, Deane, Seoane, Caldas, Pennington, Pfeffer and Osbourn.)
- Published
- 2020
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18. Comparable Vδ2 Cell Functional Characteristics in Virally Suppressed People Living with HIV and Uninfected Individuals.
- Author
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Clohosey ML, Mann BT, Ryan PL, Apanasovich TV, Maggirwar SB, Pennington DJ, and Soriano-Sarabia N
- Subjects
- Adult, Anti-Retroviral Agents therapeutic use, Cell Line, Tumor, Female, HIV drug effects, HIV Infections drug therapy, Humans, Immunologic Memory immunology, Male, Phenotype, HIV immunology, HIV Infections immunology, Intraepithelial Lymphocytes immunology, Receptors, Antigen, T-Cell immunology, T-Lymphocyte Subsets immunology
- Abstract
Crosstalk between innate and adaptive pathways is a critical component to developing an effective, lasting immune response. Among natural effector cells, innate-like γδ T cells promote immunity by facilitating communication between the two compartments and exerting cytotoxic effector functions. Dysregulation of γδ T cell populations is a byproduct of primary Humanimmunodeficiency virus (HIV) infection. This is most pronounced in the depletion and loss of function within cells expressing a Vγ9Vδ2 TCR (Vδ2 cells). Whether or not prolonged viral suppression mediated by antiretroviral therapy (ART) can reverse these effects has yet to be determined. In this study, we present evidence of similar Vδ2 cell functional responses within a cohort of people living with HIV (PLWH) that has been stably suppressed for >1 year and uninfected donors. Through the use of aminobisphosphonate drugs, we were able to generate a comprehensive comparison between ex vivo and expanded Vδ2 cells within each group. Both groups had largely similar compositions of memory and effector phenotypes, post-expansion TCR repertoire diversity, and cytotoxic capabilities. Our findings support the notion that ART promotes the recovery of Vδ2 polyfunctionality and provides insight for strategies aiming to reconstitute the full immune response after infection with HIV.
- Published
- 2020
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19. Bordeaux 2018: Wine, Cheese, and γδ T Cells.
- Author
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Edelblum K, Gustafsson K, Pennington DJ, Willcox BE, and Ribot JC
- Subjects
- Animals, Butyrophilins physiology, Congresses as Topic, Humans, Immunotherapy, Infections immunology, Inflammation immunology, Lymphocyte Activation, Neoplasms immunology, Receptors, Lymphocyte Homing physiology, T-Lymphocyte Subsets physiology, Receptors, Antigen, T-Cell, gamma-delta physiology, T-Lymphocyte Subsets immunology
- Published
- 2019
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20. Developmental origins of murine γδ T-cell subsets.
- Author
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Sumaria N, Martin S, and Pennington DJ
- Subjects
- Animals, Mice, Signal Transduction immunology, Receptors, Antigen, T-Cell, gamma-delta immunology, T-Lymphocyte Subsets immunology
- Abstract
Murine γδ T cells display diverse responses to pathogens and tumours through early provision of pro-inflammatory cytokines such as interleukin-17A (IL-17) and interferon-γ (IFN-γ). Although it is now clear that acquisition of these cytokine-secreting effector fates is to a great extent developmentally pre-programmed in the thymus, the stages through which γδ progenitor cells transition, and the underlying mechanistic processes that govern these commitment events, are still largely unclear. Here, we review recent progress in the field, with particular consideration of how TCR-γδ signalling impacts on developmental programmes initiated before TCR-γδ expression., (© 2018 John Wiley & Sons Ltd.)
- Published
- 2019
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21. Correction: Signatures of inflammation and impending multiple organ dysfunction in the hyperacute phase of trauma: A prospective cohort study.
- Author
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Cabrera CP, Manson J, Shepherd JM, Torrance HD, Watson D, Longhi MP, Hoti M, Patel MB, O'Dwyer M, Nourshargh S, Pennington DJ, Barnes MR, and Brohi K
- Abstract
[This corrects the article DOI: 10.1371/journal.pmed.1002352.].
- Published
- 2018
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22. Increased TCR signal strength in DN thymocytes promotes development of gut TCRαβ (+) CD8αα (+) intraepithelial lymphocytes.
- Author
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Grandjean CL, Sumaria N, Martin S, and Pennington DJ
- Subjects
- Animals, Biomarkers, Immunophenotyping, Intraepithelial Lymphocytes metabolism, Mice, Mice, Knockout, Mice, Transgenic, Mucosal-Associated Invariant T Cells metabolism, Receptors, Antigen, T-Cell, alpha-beta genetics, Receptors, Antigen, T-Cell, alpha-beta metabolism, CD8-Positive T-Lymphocytes metabolism, Receptors, Antigen, T-Cell metabolism, Signal Transduction, Thymocytes metabolism
- Abstract
CD4
(+) CD8(+) "double positive" (DP) thymocytes differentiate into diverse αβ T cell sub-types using mechanistically distinct programs. For example, conventional αβ T cells develop from DP cells after partial-agonist T cell receptor (TCR) interactions with self-peptide/MHC, whereas unconventional αβ T cells, such as TCRαβ(+) CD8αα(+) intraepithelial lymphocytes (IELs), require full-agonist TCR interactions. Despite this, DP cells appear homogeneous, and it remains unclear how distinct TCR signalling instructs distinct developmental outcomes. Moreover, whether TCR signals at earlier stages of development, for example in CD4(-) CD8(-) double negative (DN) cells, impact on later fate decisions is presently unknown. Here, we assess four strains of mice that display altered TCR signal strength in DN cells, which correlates with altered generation of unconventional TCRαβ(+) CD8αα(+) IELs. FVB/n mice (compared to C57BL/6 animals) and mice with altered preTCRα (pTα) expression, both displayed weaker TCR signalling in DN cells, an inefficient DN-to-DP transition, and reduced contribution of TCRαβ(+) CD8αα(+) IELs to gut epithelium. Conversely, TCRαβ(+) CD8αα(+) IEL development was favoured in mice with increased TCR signal strength in DN cells. Collectively, these data suggest TCR signal strength in DN cells directly impacts on subsequent DP cell differentiation, fundamentally altering the potential of thymocyte progenitors to adopt conventional versus unconventional T cell fates.- Published
- 2017
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23. Strong TCRγδ Signaling Prohibits Thymic Development of IL-17A-Secreting γδ T Cells.
- Author
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Sumaria N, Grandjean CL, Silva-Santos B, and Pennington DJ
- Subjects
- Animals, Cell Differentiation, Cells, Cultured, Female, Mice, Inbred C57BL, Thymus Gland cytology, Interleukin-17 metabolism, Receptors, Antigen, T-Cell, gamma-delta metabolism, T-Lymphocytes physiology
- Abstract
Despite a growing appreciation of γδ T cell contributions to numerous immune responses, the mechanisms that underpin their thymic development remain poorly understood. Here, using precursor/product relationships, we identify thymic stages in two distinct developmental pathways that generate γδ T cells pre-committed to subsequent secretion of either IL-17A or IFNγ. Importantly, this framework for tracking γδ T cell development has permitted definitive assessment of TCRγδ signal strength in commitment to γδ T cell effector fate; increased TCRγδ signal strength profoundly prohibited the development of all IL-17A-secreting γδ T cells, regardless of Vγ usage, but promoted the development of γδ progenitors along the IFNγ pathway. This clarifies the recently debated role of TCRγδ signal strength in commitment to distinct γδ T cell effector fates and proposes an alternate methodology for the study of γδ T cell development., (Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2017
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24. Thymic Determinants of γδ T Cell Differentiation.
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Muñoz-Ruiz M, Sumaria N, Pennington DJ, and Silva-Santos B
- Subjects
- Animals, Cytokines immunology, Cytokines metabolism, Humans, Lymphocyte Activation immunology, Models, Immunological, Receptors, Antigen, T-Cell, gamma-delta metabolism, Signal Transduction immunology, T-Lymphocyte Subsets metabolism, Thymus Gland metabolism, Cell Differentiation immunology, Receptors, Antigen, T-Cell, gamma-delta immunology, T-Lymphocyte Subsets immunology, Thymus Gland immunology
- Abstract
γd T cells have emerged as major sources of the proinflammatory cytokines interleukin-17 (IL-17) and interferon-γ (IFNγ) in multiple models of infection, cancer and autoimmune disease. However, unlike their αβ T cell counterparts that require peripheral activation for effector cell differentiation, γδ T cells instead can be 'developmentally programmed' in the thymus to generate discrete γδ T cell effector subsets with distinctive molecular signatures. Nonetheless, recent studies have presented conflicting viewpoints on the signals involved in thymic γδ T cell development and differentiation, namely on the role of both T cell receptor (TCR)-dependent and TCR-independent factors. Here we review the current data and the ongoing controversies., (Copyright © 2017 Elsevier Ltd. All rights reserved.)
- Published
- 2017
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25. IFNγ Regulates Activated Vδ2+ T Cells through a Feedback Mechanism Mediated by Mesenchymal Stem Cells.
- Author
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Fechter K, Dorronsoro A, Jakobsson E, Ferrin I, Lang V, Sepulveda P, Pennington DJ, and Trigueros C
- Subjects
- Bone Marrow Cells drug effects, Bone Marrow Cells physiology, Cell Proliferation drug effects, Cells, Cultured, Feedback, Physiological drug effects, Humans, Immune Tolerance drug effects, Mesenchymal Stem Cells physiology, Receptors, Antigen, T-Cell, gamma-delta metabolism, Signal Transduction drug effects, Signal Transduction immunology, T-Lymphocytes immunology, T-Lymphocytes metabolism, Interferon-gamma pharmacology, Lymphocyte Activation drug effects, Mesenchymal Stem Cells drug effects, T-Lymphocytes drug effects
- Abstract
γδ T cells play a role in a wide range of diseases such as autoimmunity and cancer. The majority of circulating human γδ T lymphocytes express a Vγ9Vδ2+ (Vδ2+) T cell receptor (TCR) and following activation release pro-inflammatory cytokines. In this study, we show that IFNγ, produced by Vδ2+ cells, activates mesenchymal stem cell (MSC)-mediated immunosupression, which in turn exerts a negative feedback mechanism on γδ T cell function ranging from cytokine production to proliferation. Importantly, this modulatory effect is limited to a short period of time (<24 hours) post-T cell activation, after which MSCs can no longer exert their immunoregulatory capacity. Using genetically modified MSCs with the IFNγ receptor 1 constitutively silenced, we demonstrate that IFNγ is essential to this process. Activated γδ T cells induce expression of several factors by MSCs that participate in the depletion of amino acids. In particular, we show that indolamine 2,3-dioxygenase (IDO), an enzyme involved in L-tryptophan degradation, is responsible for MSC-mediated immunosuppression of Vδ2+ T cells. Thus, our data demonstrate that γδ T cell responses can be immuno-modulated by different signals derived from MSC., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2017
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26. Heterogeneous yet stable Vδ2(+) T-cell profiles define distinct cytotoxic effector potentials in healthy human individuals.
- Author
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Ryan PL, Sumaria N, Holland CJ, Bradford CM, Izotova N, Grandjean CL, Jawad AS, Bergmeier LA, and Pennington DJ
- Subjects
- Adolescent, Adult, Aged, CX3C Chemokine Receptor 1 metabolism, Child, Child, Preschool, Cytotoxicity, Immunologic, Female, Gene Expression Profiling, Genes, T-Cell Receptor delta, Healthy Volunteers, Humans, Immunophenotyping, Lymphocyte Activation immunology, Male, Middle Aged, Receptors, Antigen, T-Cell, gamma-delta genetics, Receptors, CCR6 metabolism, Young Adult, Receptors, Antigen, T-Cell, gamma-delta metabolism, T-Lymphocyte Subsets immunology, T-Lymphocytes, Cytotoxic immunology
- Abstract
Human γδ T cells display potent responses to pathogens and malignancies. Of particular interest are those expressing a γδ T-cell receptor (TCR) incorporating TCRδ-chain variable-region-2 [Vδ2
(+) ], which are activated by pathogen-derived phosphoantigens (pAgs), or host-derived pAgs that accumulate in transformed cells or in cells exposed to aminobisphosphonates. Once activated, Vδ2(+) T cells exhibit multiple effector functions that have made them attractive candidates for immunotherapy. Despite this, clinical trials have reported mixed patient responses, highlighting a need for better understanding of Vδ2(+) T-cell biology. Here, we reveal previously unappreciated functional heterogeneity between the Vδ2(+) T-cell compartments of 63 healthy individuals. In this cohort, we identify distinct "Vδ2 profiles" that are stable over time; that do not correlate with age, gender, or history of phosphoantigen activation; and that develop after leaving the thymus. Multiple analyses suggest these Vδ2 profiles consist of variable proportions of two dominant but contrasting Vδ2(+) T-cell subsets that have divergent transcriptional programs and that display mechanistically distinct cytotoxic potentials. Importantly, an individual's Vδ2 profile predicts defined effector capacities, demonstrated by contrasting mechanisms and efficiencies of killing of a range of tumor cell lines. In short, these data support patient stratification to identify individuals with Vδ2 profiles that have effector mechanisms compatible with tumor killing and suggest that tailored Vδ2-profile-specific activation protocols may maximize the chances of future treatment success., Competing Interests: The authors declare no conflict of interest.- Published
- 2016
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27. TCR signal strength controls thymic differentiation of discrete proinflammatory γδ T cell subsets.
- Author
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Muñoz-Ruiz M, Ribot JC, Grosso AR, Gonçalves-Sousa N, Pamplona A, Pennington DJ, Regueiro JR, Fernández-Malavé E, and Silva-Santos B
- Subjects
- Animals, Antigens, Ly metabolism, Cells, Cultured, Disease Models, Animal, Humans, Interferon-gamma metabolism, Interleukin-17 metabolism, Interleukin-2 Receptor beta Subunit metabolism, Mice, Mice, Inbred C57BL, Mice, Transgenic, NK Cell Lectin-Like Receptor Subfamily B metabolism, Receptors, Antigen, T-Cell, gamma-delta genetics, Signal Transduction, Cell Differentiation, Inflammation immunology, Malaria, Cerebral immunology, Receptors, Antigen, T-Cell, gamma-delta metabolism, T-Lymphocyte Subsets physiology, T-Lymphocytes physiology, Thymus Gland immunology
- Abstract
The mouse thymus produces discrete γδ T cell subsets that make either interferon-γ (IFN-γ) or interleukin 17 (IL-17), but the role of the T cell antigen receptor (TCR) in this developmental process remains controversial. Here we show that Cd3g(+/-) Cd3d(+/-) (CD3 double-haploinsufficient (CD3DH)) mice have reduced TCR expression and signaling strength on γδ T cells. CD3DH mice had normal numbers and phenotypes of αβ thymocyte subsets, but impaired differentiation of fetal Vγ6(+) (but not Vγ4(+)) IL-17-producing γδ T cells and a marked depletion of IFN-γ-producing CD122(+) NK1.1(+) γδ T cells throughout ontogeny. Adult CD3DH mice showed reduced peripheral IFN-γ(+) γδ T cells and were resistant to experimental cerebral malaria. Thus, TCR signal strength within specific thymic developmental windows is a major determinant of the generation of proinflammatory γδ T cell subsets and their impact on pathophysiology.
- Published
- 2016
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28. The emerging Protumor role of γδ T lymphocytes: implications for cancer immunotherapy.
- Author
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Rei M, Pennington DJ, and Silva-Santos B
- Subjects
- Animals, Disease Progression, Humans, Immunologic Surveillance, Immunotherapy methods, Lymphocytes, Tumor-Infiltrating immunology, Neoplasms immunology, Neoplasms therapy, Receptors, Antigen, T-Cell, gamma-delta immunology, T-Lymphocyte Subsets immunology
- Abstract
Tumor-infiltrating lymphocytes are key mediators of tumor immune surveillance and are important prognostic indicators in cancer progression. Among the various lymphocyte subsets implicated in protection against cancer are γδ T lymphocytes, which can kill tumor cells and secrete potent antitumor cytokines. By contrast, recent reports have revealed an unexpected series of protumor functions of γδ T cells in mouse models and human patients. In particular, specific γδ T-cell subsets are capable of recruiting immunosuppressive myeloid populations, inhibiting antitumor responses, and enhancing angiogenesis, thus promoting cancer progression. A common mediator of such functions appears to be the cytokine IL17, whose pathogenic effects can override the antitumor immune response orchestrated by IFNγ. Here, we review these studies and discuss their implications for the manipulation of γδ T cells in cancer immunotherapy., (©2015 American Association for Cancer Research.)
- Published
- 2015
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29. Cytokines and chemokines: At the crossroads of cell signalling and inflammatory disease.
- Author
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Turner MD, Nedjai B, Hurst T, and Pennington DJ
- Abstract
Inflammation occurs as a result of exposure of tissues and organs to harmful stimuli such as microbial pathogens, irritants, or toxic cellular components. The primary physical manifestations of inflammation are redness, swelling, heat, pain, and loss of function to the affected area. These processes involve the major cells of the immune system, including monocytes, macrophages, neutrophils, basophils, dendritic cells, mast cells, T-cells, and B-cells. However, examination of a range of inflammatory lesions demonstrates the presence of specific leukocytes in any given lesion. That is, the inflammatory process is regulated in such a way as to ensure that the appropriate leukocytes are recruited. These events are in turn controlled by a host of extracellular molecular regulators, including members of the cytokine and chemokine families that mediate both immune cell recruitment and complex intracellular signalling control mechanisms that characterise inflammation. This review will focus on the role of the main cytokines, chemokines, and their receptors in the pathophysiology of auto-inflammatory disorders, pro-inflammatory disorders, and neurological disorders involving inflammation., (Copyright © 2014 Elsevier B.V. All rights reserved.)
- Published
- 2014
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30. Murine CD27(-) Vγ6(+) γδ T cells producing IL-17A promote ovarian cancer growth via mobilization of protumor small peritoneal macrophages.
- Author
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Rei M, Gonçalves-Sousa N, Lança T, Thompson RG, Mensurado S, Balkwill FR, Kulbe H, Pennington DJ, and Silva-Santos B
- Subjects
- Animals, Cell Line, Tumor, Cell Movement, Cell Proliferation, Female, Inflammation Mediators metabolism, Lymphocytes, Tumor-Infiltrating classification, Lymphocytes, Tumor-Infiltrating immunology, Lymphocytes, Tumor-Infiltrating pathology, Macrophages, Peritoneal pathology, Mice, Mice, Inbred C57BL, Mice, Knockout, Neovascularization, Pathologic, Ovarian Neoplasms pathology, Receptors, Antigen, T-Cell, gamma-delta deficiency, Receptors, Antigen, T-Cell, gamma-delta genetics, Receptors, Interleukin-17 metabolism, T-Lymphocyte Subsets pathology, Tumor Necrosis Factor Receptor Superfamily, Member 7 deficiency, Tumor Necrosis Factor Receptor Superfamily, Member 7 genetics, Interleukin-17 biosynthesis, Macrophages, Peritoneal immunology, Ovarian Neoplasms immunology, Receptors, Antigen, T-Cell, gamma-delta metabolism, T-Lymphocyte Subsets immunology, Tumor Necrosis Factor Receptor Superfamily, Member 7 metabolism
- Abstract
Cancer-associated inflammation mobilizes a variety of leukocyte populations that can inhibit or enhance tumor cell growth in situ. These subsets include γδ T cells, which can infiltrate tumors and typically provide large amounts of antitumor cytokines, such as IFN-γ. By contrast, we report here that in a well-established transplantable (ID8 cell line) model of peritoneal/ovarian cancer, γδ T cells promote tumor cell growth. γδ T cells accumulated in the peritoneal cavity in response to tumor challenge and could be visualized within solid tumor foci. Functional characterization of tumor-associated γδ T cells revealed preferential production of interleukin-17A (IL-17), rather than IFN-γ. Consistent with this finding, both T cell receptor (TCR)δ-deficient and IL-17-deficient mice displayed reduced ID8 tumor growth compared with wild-type animals. IL-17 production by γδ T cells in the tumor environment was essentially restricted to a highly proliferative CD27((-)) subset that expressed Vγ6 instead of the more common Vγ1 and Vγ4 TCR chains. The preferential expansion of IL-17-secreting CD27((-)) Vγ6((+)) γδ T cells associated with the selective mobilization of unconventional small peritoneal macrophages (SPMs) that, in comparison with large peritoneal macrophages, were enriched for IL-17 receptor A, and for protumor and proangiogenic molecular mediators, which were up-regulated by IL-17. Importantly, SPMs were uniquely and directly capable of promoting ovarian cancer cell proliferation. Collectively, this work identifies an IL-17-dependent lymphoid/myeloid cross-talk involving γδ T cells and SPMs that promotes tumor cell growth and thus counteracts cancer immunosurveillance.
- Published
- 2014
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31. Epigenetic and transcriptional signatures of stable versus plastic differentiation of proinflammatory γδ T cell subsets.
- Author
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Schmolka N, Serre K, Grosso AR, Rei M, Pennington DJ, Gomes AQ, and Silva-Santos B
- Subjects
- Animals, Cytokines genetics, Cytokines metabolism, Female, Gene Expression Regulation, Genome-Wide Association Study, Histones metabolism, Methylation, Mice, Mice, Knockout, Receptors, Antigen, T-Cell, gamma-delta metabolism, T-Lymphocyte Subsets immunology, Th1 Cells immunology, Th1 Cells metabolism, Th17 Cells immunology, Th17 Cells metabolism, Cell Differentiation genetics, Epigenesis, Genetic, Gene Expression Profiling, Receptors, Antigen, T-Cell, gamma-delta genetics, T-Lymphocyte Subsets cytology, T-Lymphocyte Subsets metabolism, Transcriptome
- Abstract
Two distinct subsets of γδ T cells that produce interleukin 17 (IL-17) (CD27(-) γδ T cells) or interferon-γ (IFN-γ) (CD27(+) γδ T cells) develop in the mouse thymus, but the molecular determinants of their functional potential in the periphery remain unknown. Here we conducted a genome-wide characterization of the methylation patterns of histone H3, along with analysis of mRNA encoding transcription factors, to identify the regulatory networks of peripheral IFN-γ-producing or IL-17-producing γδ T cell subsets in vivo. We found that CD27(+) γδ T cells were committed to the expression of Ifng but not Il17, whereas CD27(-) γδ T cells displayed permissive chromatin configurations at loci encoding both cytokines and their regulatory transcription factors and differentiated into cells that produced both IL-17 and IFN-γ in a tumor microenvironment.
- Published
- 2013
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32. Functional development of γδ T cells.
- Author
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Prinz I, Silva-Santos B, and Pennington DJ
- Subjects
- Animals, CD4-Positive T-Lymphocytes metabolism, CD8-Positive T-Lymphocytes metabolism, Cell Differentiation, Cell Lineage, Humans, Interferon-gamma biosynthesis, Interleukin-17 biosynthesis, Mice, T-Lymphocyte Subsets metabolism, Thymus Gland metabolism, Transcription, Genetic, CD4-Positive T-Lymphocytes immunology, CD8-Positive T-Lymphocytes immunology, Receptors, Antigen, T-Cell, gamma-delta analysis, T-Lymphocyte Subsets immunology, Thymus Gland embryology
- Abstract
The thymus generates T cells that are generally functionally immature and thus require peripheral activation for differentiation into effector lymphocytes. Notable exceptions to this rule are murine γδ T cells, many of which have been shown to acquire their functional potential during thymic development from late embryonic stages. Here, we review the underlying ontogenic processes and molecular differentiation mechanisms of murine γδ T cells, focusing on the transcriptional control of IFN-γ and IL-17 expression. We propose that functional commitment of γδ T cells occurs in "developmental windows" defined by the molecular composition of the thymic microenvironment, such as T-cell receptor (TCR), TCR coreceptor ligands, and cytokines. We further discuss the similarities and particularities of functional development of γδ T cells in mice and humans, while highlighting some key unresolved issues for future investigation., (© 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2013
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33. Epithelial and dendritic cells in the thymic medulla promote CD4+Foxp3+ regulatory T cell development via the CD27-CD70 pathway.
- Author
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Coquet JM, Ribot JC, Bąbała N, Middendorp S, van der Horst G, Xiao Y, Neves JF, Fonseca-Pereira D, Jacobs H, Pennington DJ, Silva-Santos B, and Borst J
- Subjects
- Animals, Bone Marrow Transplantation, CD27 Ligand genetics, CD8 Antigens genetics, CD8 Antigens immunology, Cell Survival genetics, Cell Survival immunology, Dendritic Cells cytology, Epithelial Cells cytology, Forkhead Transcription Factors genetics, Forkhead Transcription Factors immunology, Mice, Mice, Knockout, Precursor Cells, T-Lymphoid cytology, Precursor Cells, T-Lymphoid immunology, T-Lymphocytes, Regulatory cytology, Thymus Gland cytology, Transcription Factors genetics, Transcription Factors immunology, Transplantation Chimera genetics, Transplantation Chimera immunology, Transplantation, Homologous, Tumor Necrosis Factor Receptor Superfamily, Member 7 genetics, AIRE Protein, CD27 Ligand immunology, Dendritic Cells immunology, Epithelial Cells immunology, Signal Transduction physiology, T-Lymphocytes, Regulatory immunology, Thymus Gland immunology, Tumor Necrosis Factor Receptor Superfamily, Member 7 immunology
- Abstract
CD4(+)Foxp3(+) regulatory T cells (Treg cells) are largely autoreactive yet escape clonal deletion in the thymus. We demonstrate here that CD27-CD70 co-stimulation in the thymus rescues developing Treg cells from apoptosis and thereby promotes Treg cell generation. Genetic ablation of CD27 or its ligand CD70 reduced Treg cell numbers in the thymus and peripheral lymphoid organs, whereas it did not alter conventional CD4(+)Foxp3(-) T cell numbers. The CD27-CD70 pathway was not required for pre-Treg cell generation, Foxp3 induction, or mature Treg cell function. Rather, CD27 signaling enhanced positive selection of Treg cells within the thymus in a cell-intrinsic manner. CD27 signals promoted the survival of thymic Treg cells by inhibiting the mitochondrial apoptosis pathway. CD70 was expressed on Aire(-) and Aire(+) medullary thymic epithelial cells (mTECs) and on dendritic cells (DCs) in the thymic medulla. CD70 on both mTECs and DCs contributed to Treg cell development as shown in BM chimera experiments with CD70-deficient mice. In vitro experiments indicated that CD70 on the CD8α(+) subset of thymic DCs promoted Treg cell development. Our data suggest that mTECs and DCs form dedicated niches in the thymic medulla, in which CD27-CD70 co-stimulation rescues developing Treg cells from apoptosis, subsequent to Foxp3 induction by TCR and CD28 signals.
- Published
- 2013
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34. Interleukin 7 (IL-7) selectively promotes mouse and human IL-17-producing γδ cells.
- Author
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Michel ML, Pang DJ, Haque SF, Potocnik AJ, Pennington DJ, and Hayday AC
- Subjects
- Animals, Cells, Cultured, Humans, Mice, Interleukin-17 biosynthesis, Interleukin-7 physiology, Receptors, Antigen, T-Cell, gamma-delta immunology, T-Lymphocytes metabolism
- Abstract
IL-17-producing CD27(-) γδ cells (γδ(27-) cells) are widely viewed as innate immune cells that make critical contributions to host protection and autoimmunity. However, factors that promote them over IFN-γ-producing γδ(27+) cells are poorly elucidated. Moreover, although human IL-17-producing γδ cells are commonly implicated in inflammation, such cells themselves have proved difficult to isolate and characterize. Here, murine γδ(27-) T cells and thymocytes are shown to be rapidly and substantially expanded by IL-7 in vitro and in vivo. This selectivity owes in substantial part to the capacity of IL-7 to activate STAT3 in such cells. Additionally, IL-7 promotes strong responses of IL-17-producing γδ cells to TCR agonists, thus reemphasizing the cells' adaptive and innate potentials. Moreover, human IL-17-producing γδ cells are also substantially expanded by IL-7 plus TCR agonists. Hence, IL-7 has a conserved potential to preferentially regulate IL-17-producing γδ cells, with both biological and clinical implications.
- Published
- 2012
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35. Understanding the complexity of γδ T-cell subsets in mouse and human.
- Author
-
Pang DJ, Neves JF, Sumaria N, and Pennington DJ
- Subjects
- Animals, Cell Differentiation immunology, Cell Lineage immunology, Humans, Lymphocyte Activation, Mice, Models, Immunological, Signal Transduction immunology, Species Specificity, T-Lymphocyte Subsets cytology, Thymus Gland cytology, Thymus Gland immunology, Receptors, Antigen, T-Cell, gamma-delta metabolism, T-Lymphocyte Subsets immunology
- Abstract
γδ T cells are increasingly recognized as having important functional roles in a range of disease scenarios such as infection, allergy, autoimmunity and cancer. With this has come realization that γδ cells are not a homogeneous population of cells with a single physiological role. Instead, ever increasing complexity in both phenotype and function is being ascribed to γδ cell subsets from various tissues and locations, and in both mouse and human. Here, we review this complexity by describing how diverse γδ cell subsets are generated in the murine thymus, and how these events relate to subsequent γδ subset function in the periphery. We then review the two major γδ cell populations in human, highlighting the several similarities of Vδ1(+) cells to certain murine γδ subsets, and describing the remarkable functional plasticity of human Vδ2(+) cells. A better understanding of this spectrum of γδ cell phenotypes should facilitate more targeted approaches to utilise their tremendous functional potential in the clinic., (© 2012 The Authors. Immunology © 2012 Blackwell Publishing Ltd.)
- Published
- 2012
- Full Text
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36. T cell receptor signalling in γδ cell development: strength isn't everything.
- Author
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Turchinovich G and Pennington DJ
- Subjects
- Adaptive Immunity, Animals, Cell Lineage, Humans, Immunity, Innate, Receptors, Antigen, T-Cell, gamma-delta metabolism, T-Lymphocytes cytology, T-Lymphocytes metabolism, Receptors, Antigen, T-Cell, gamma-delta immunology, Signal Transduction, T-Lymphocytes immunology
- Abstract
γδ cells have been conserved across ∼450 million years of evolution, from which they share the distinction, alongside αβ T cells and B cells, of forming antigen receptors by somatic gene recombination. However, much about these cells remains unclear. Indeed, although γδ cells display 'innate-like' characteristics exemplified by rapid tissue-localised responses to stress-associated stimuli, their huge capacity for T cell receptor (TCR)γδ diversity also suggests 'adaptive-like' potential. Clarity requires a better understanding of TCRγδ itself, not only through identification of TCR ligands, but also by correlating thymic TCRγδ signalling with commitment to γδ effector fates. Here, we propose that thymic TCRγδ-ligand engagement versus ligand-independent signalling differentially imprints innate-like versus adaptive-like characteristics on developing γδ cells, which fundamentally dictate their peripheral effector properties., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
- Full Text
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37. PreTCR and TCRγδ signal initiation in thymocyte progenitors does not require domains implicated in receptor oligomerization.
- Author
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Mahtani-Patching J, Neves JF, Pang DJ, Stoenchev KV, Aguirre-Blanco AM, Silva-Santos B, and Pennington DJ
- Subjects
- Animals, Cells, Cultured, Lymphoid Progenitor Cells cytology, Mice, Mice, Knockout, Protein Multimerization genetics, Protein Structure, Tertiary, Receptors, Antigen, T-Cell, gamma-delta genetics, Signal Transduction genetics, Thymus Gland cytology, Lymphoid Progenitor Cells immunology, Protein Multimerization immunology, Receptors, Antigen, T-Cell, gamma-delta immunology, Signal Transduction immunology, Thymus Gland immunology
- Abstract
Whether thymocytes adopt an αβ or a γδ T cell fate in the thymus is determined at the β selection checkpoint by the relatively weak or strong signals that are delivered by either the pre-T cell receptor (preTCR) or the γδ TCR, respectively. Signal initiation at the β selection checkpoint is thought to be independent of ligand engagement of these receptors. Some reports have suggested that receptor oligomerization, which is thought to be mediated by either the immunoglobulin (Ig)-like domain of the preTCRα (pTα) chain or the variable domain of TCRδ, is a unifying mechanism that initiates signaling in early CD4(-)CD8(-) double-negative (DN) thymocyte progenitors. Here, we demonstrate that the extracellular regions of pTα and TCRδ that are implicated in mediating receptor oligomerization were not required for signal initiation from the preTCR or TCRγδ. Indeed, a truncated TCRγδ that lacked all of its extracellular Ig-like domains still formed a signaling-competent TCR that drove cells through the β selection checkpoint. These observations suggest that signal initiation in DN thymocytes is simply a consequence of the surface-pairing of TCR chains, with signal strength being a function of the abundances of surface TCRs. Thus, processes that regulate the surface abundances of TCR complexes in DN cells, such as oligomerization-induced endocytosis, would be predicted to have a major influence in determining whether cells adopt an αβ versus γδ T cell fate.
- Published
- 2011
- Full Text
- View/download PDF
38. For neonates undergoing cardiac surgery does thymectomy as opposed to thymic preservation have any adverse immunological consequences?
- Author
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Afifi A, Raja SG, Pennington DJ, and Tsang VT
- Subjects
- Adult, Benchmarking, Child, Child, Preschool, Evidence-Based Medicine, Heart Defects, Congenital immunology, Humans, Infant, Infant, Newborn, Risk Assessment, T-Lymphocytes immunology, Treatment Outcome, Cardiac Surgical Procedures adverse effects, Heart Defects, Congenital surgery, Thymectomy adverse effects
- Abstract
A best evidence topic in congenital cardiac surgery was written according to a structured protocol. The question addressed was whether neonatal thymectomy in patients undergoing cardiac surgery has any adverse immunological consequences. Altogether 164 papers were found using the reported search, of which nine papers represented the best evidence to answer the clinical question. The author, journal, date and country of publication, patient group studied, study type, relevant outcomes, results and study weaknesses were tabulated. The thymus is the major production site of T cells, whose stocks are built-up during foetal and early postnatal life. However, its function diminishes after the first years of life, and although thymic output is maintained into adulthood, the thymus mostly degenerates into fatty tissue in elderly adults. To date, there has been no general consensus with regard to the importance of this organ during childhood and adulthood. As a consequence, during cardiac surgery in neonates, partial or total thymectomy is routinely performed to enable better access to the heart and great vessels to correct congenital heart defects, suggesting that it may be dispensable during childhood and adulthood. Interestingly, current best available evidence from nine case-control studies suggests that neonatal thymectomy affects peripheral T-cell populations both in the short- as well as long-term and results in premature immunosenescence. However, the impact of these changes on the risk of infectious diseases or malignancy has not been thoroughly evaluated by any of these studies. Maintenance of a registry of patients undergoing neonatal thymectomy and further studies to assess the functional or clinical consequences of this practice would be valuable.
- Published
- 2010
- Full Text
- View/download PDF
39. CD27 is a thymic determinant of the balance between interferon-gamma- and interleukin 17-producing gammadelta T cell subsets.
- Author
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Ribot JC, deBarros A, Pang DJ, Neves JF, Peperzak V, Roberts SJ, Girardi M, Borst J, Hayday AC, Pennington DJ, and Silva-Santos B
- Subjects
- Animals, CD27 Ligand immunology, Cells, Cultured, Lymphotoxin beta Receptor immunology, Malaria, Cerebral immunology, Mice, Mice, Inbred C57BL, Plasmodium berghei, Tumor Necrosis Factor Receptor Superfamily, Member 7 genetics, Interferon-gamma immunology, Interleukin-17 immunology, Lymphoid Progenitor Cells immunology, Receptors, Antigen, T-Cell, gamma-delta immunology, T-Lymphocyte Subsets immunology, Thymus Gland immunology, Tumor Necrosis Factor Receptor Superfamily, Member 7 immunology
- Abstract
The production of cytokines such as interferon-gamma and interleukin 17 by alphabeta and gammadelta T cells influences the outcome of immune responses. Here we show that most gammadelta T lymphocytes expressed the tumor necrosis factor receptor family member CD27 and secreted interferon-gamma, whereas interleukin 17 production was restricted to CD27(-) gammadelta T cells. In contrast to the apparent plasticity of alphabeta T cells, the cytokine profiles of these distinct gammadelta T cell subsets were essentially stable, even during infection. These phenotypes were established during thymic development, when CD27 functions as a regulator of the differentiation of gammadelta T cells at least in part by inducing expression of the lymphotoxin-beta receptor and genes associated with trans-conditioning and interferon-gamma production. Thus, the cytokine profiles of peripheral gammadelta T cells are predetermined mainly by a mechanism involving CD27.
- Published
- 2009
- Full Text
- View/download PDF
40. Tumor therapy in mice via antigen targeting to a novel, DC-restricted C-type lectin.
- Author
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Sancho D, Mourão-Sá D, Joffre OP, Schulz O, Rogers NC, Pennington DJ, Carlyle JR, and Reis e Sousa C
- Subjects
- Animals, Antigens chemistry, Dendritic Cells immunology, Humans, Lectins, C-Type, Lung Neoplasms secondary, Lung Neoplasms therapy, Mice, Models, Biological, Neoplasm Metastasis, Receptors, Immunologic genetics, Receptors, Immunologic physiology, Receptors, Mitogen, CD8 Antigens biosynthesis, Dendritic Cells cytology, Immunotherapy methods, Lectins metabolism, Melanoma pathology, Melanoma therapy, Neoplasms therapy, Receptors, Immunologic metabolism, T-Lymphocytes, Cytotoxic metabolism
- Abstract
The mouse CD8alpha+ DC subset excels at cross-presentation of antigen, which can elicit robust CTL responses. A receptor allowing specific antigen targeting to this subset and its equivalent in humans would therefore be useful for the induction of antitumor CTLs. Here, we have characterized a C-type lectin of the NK cell receptor group that we named DC, NK lectin group receptor-1 (DNGR-1). DNGR-1 was found to be expressed in mice at high levels by CD8+ DCs and at low levels by plasmacytoid DCs but not by other hematopoietic cells. Human DNGR-1 was also restricted in expression to a small subset of blood DCs that bear similarities to mouse CD8alpha+ DCs. The selective expression pattern and observed endocytic activity of DNGR-1 suggested that it could be used for antigen targeting to DCs. Consistent with this notion, antigen epitopes covalently coupled to an antibody specific for mouse DNGR-1 were selectively cross-presented by CD8alpha+ DCs in vivo and, when given with adjuvants, induced potent CTL responses. When the antigens corresponded to tumor-expressed peptides, treatment with the antibody conjugate and adjuvant could prevent development or mediate eradication of B16 melanoma lung pseudometastases. We conclude that DNGR-1 is a novel, highly specific marker of mouse and human DC subsets that can be exploited for CTL cross-priming and tumor therapy.
- Published
- 2008
- Full Text
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41. Newly identified genetic risk variants for celiac disease related to the immune response.
- Author
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Hunt KA, Zhernakova A, Turner G, Heap GA, Franke L, Bruinenberg M, Romanos J, Dinesen LC, Ryan AW, Panesar D, Gwilliam R, Takeuchi F, McLaren WM, Holmes GK, Howdle PD, Walters JR, Sanders DS, Playford RJ, Trynka G, Mulder CJ, Mearin ML, Verbeek WH, Trimble V, Stevens FM, O'Morain C, Kennedy NP, Kelleher D, Pennington DJ, Strachan DP, McArdle WL, Mein CA, Wapenaar MC, Deloukas P, McGinnis R, McManus R, Wijmenga C, and van Heel DA
- Subjects
- Animals, Case-Control Studies, Celiac Disease immunology, Chromosome Mapping, Cohort Studies, Diabetes Mellitus, Type 1 genetics, Female, HLA-DQ Antigens metabolism, Humans, Interleukin-12 Subunit p35 genetics, Interleukin-18 Receptor beta Subunit blood, Interleukin-18 Receptor beta Subunit genetics, Linkage Disequilibrium, Male, Mice, Polymerase Chain Reaction, RGS Proteins genetics, RNA, Messenger genetics, RNA, Messenger metabolism, Receptors, CCR3 genetics, Risk Factors, Tissue Distribution, Biomarkers, Celiac Disease genetics, Genetic Markers genetics, Genetic Predisposition to Disease, Genome, Human, Polymorphism, Single Nucleotide
- Abstract
Our genome-wide association study of celiac disease previously identified risk variants in the IL2-IL21 region. To identify additional risk variants, we genotyped 1,020 of the most strongly associated non-HLA markers in an additional 1,643 cases and 3,406 controls. Through joint analysis including the genome-wide association study data (767 cases, 1,422 controls), we identified seven previously unknown risk regions (P < 5 x 10(-7)). Six regions harbor genes controlling immune responses, including CCR3, IL12A, IL18RAP, RGS1, SH2B3 (nsSNP rs3184504) and TAGAP. Whole-blood IL18RAP mRNA expression correlated with IL18RAP genotype. Type 1 diabetes and celiac disease share HLA-DQ, IL2-IL21, CCR3 and SH2B3 risk regions. Thus, this extensive genome-wide association follow-up study has identified additional celiac disease risk variants in relevant biological pathways.
- Published
- 2008
- Full Text
- View/download PDF
42. Key factors in the organized chaos of early T cell development.
- Author
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Hayday AC and Pennington DJ
- Subjects
- Animals, Humans, Receptors, Notch metabolism, Signal Transduction, T-Lymphocytes metabolism, Thymus Gland immunology, Thymus Gland metabolism, Time Factors, Cell Differentiation immunology, T-Lymphocytes cytology, T-Lymphocytes immunology
- Abstract
A fundamental issue in T cell development is what controls whether a thymocyte differentiates into a gammadelta T cell or an alphabeta T cell, each defined by their distinct T cell receptor. Most likely, lessons learned in studying that issue will also provide insight into how the thymus produces T cell subsets with distinct functional and regulatory potentials. Here we review recent experiments, focusing on three factors that regulate thymocyte differentiation up to and including the expression of the first products of antigen receptor gene rearrangements. Those factors are the archetypal developmental regulator Notch, intrinsic signals emanating from antigen-receptor complexes, and trans conditioning, which reflects communication between different subsets of thymocytes. We also review new findings on the positive selection of gammadelta T cells and on extrathymic T cell development.
- Published
- 2007
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- View/download PDF
43. Early events in the thymus affect the balance of effector and regulatory T cells.
- Author
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Pennington DJ, Silva-Santos B, Silberzahn T, Escórcio-Correia M, Woodward MJ, Roberts SJ, Smith AL, Dyson PJ, and Hayday AC
- Subjects
- Animals, Cell Count, Forkhead Transcription Factors metabolism, Mice, Mice, Inbred C57BL, Receptors, Antigen, T-Cell immunology, Receptors, Antigen, T-Cell, alpha-beta deficiency, Receptors, Antigen, T-Cell, alpha-beta genetics, Receptors, Antigen, T-Cell, alpha-beta immunology, Stem Cells cytology, Stem Cells immunology, Time Factors, Cell Differentiation, T-Lymphocyte Subsets cytology, T-Lymphocyte Subsets immunology, T-Lymphocytes, Regulatory cytology, T-Lymphocytes, Regulatory immunology, Thymus Gland cytology, Thymus Gland immunology
- Abstract
In cellular immunology the critical balance between effector and regulatory mechanisms is highlighted by serious immunopathologies attributable to mutations in Foxp3, a transcription factor required for a major subset of regulatory T (Tr) cells. Thus, many studies have focused on the developmental origin of Tr cells, with the prevailing view that they emerge in the thymus from late-stage T-cell progenitors whose T-cell receptors (TCRs) engage high affinity (agonist) ligands. This study questions the completeness of that interpretation. Here we show that without any obvious effect on TCR-mediated selection, the normal differentiation of mouse gammabeta T cells into potent cytolytic and interferon-gamma-secreting effector cells is switched towards an aggregate regulatory phenotype by limiting the capacity of CD4+CD8+ T-cell progenitors to influence in trans early gammabeta cell progenitors. Unexpectedly, we found that the propensity of early TCR-alphabeta+ progenitors to differentiate into Foxp3+ Tr cells is also regulated in trans by CD4+CD8+ T-cell progenitor cells, before agonist selection.
- Published
- 2006
- Full Text
- View/download PDF
44. Gammadelta T cell development--having the strength to get there.
- Author
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Pennington DJ, Silva-Santos B, and Hayday AC
- Subjects
- Animals, Cell Differentiation physiology, Clonal Deletion immunology, Clonal Deletion physiology, Humans, Membrane Proteins physiology, Receptors, Notch, Signal Transduction physiology, T-Lymphocytes cytology, T-Lymphocytes physiology, Thymus Gland cytology, Thymus Gland immunology, Thymus Gland physiology, Cell Differentiation immunology, Receptors, Antigen, T-Cell, gamma-delta immunology, T-Lymphocytes immunology
- Abstract
Gammadelta T cells play critical roles in immune regulation, tumour surveillance and specific primary immune responses. Mature gammadelta cells derive from thymic precursors that also generate alphabeta T cells. Recent reports have highlighted the impact of the strength of signal received via the T cell receptor on T cell lineage commitment, and the importance of cross-talk between committed alphabeta thymocytes and bipotential progenitors for normal gammadelta T cell differentiation. Studies on T cell receptor-mediated selection of gammadelta cells have supported the view that these unconventional T cells are positively rather than negatively selected on cognate self antigen.
- Published
- 2005
- Full Text
- View/download PDF
45. Lymphotoxin-mediated regulation of gammadelta cell differentiation by alphabeta T cell progenitors.
- Author
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Silva-Santos B, Pennington DJ, and Hayday AC
- Subjects
- Animals, Cell Differentiation, Cell Lineage, Gene Expression, Genes, T-Cell Receptor, Ligands, Lymphocyte Activation, Lymphotoxin beta Receptor, Lymphotoxin-alpha biosynthesis, Lymphotoxin-alpha genetics, Membrane Proteins genetics, Mice, Mice, Inbred C57BL, Nuclear Receptor Subfamily 1, Group F, Member 3, Phenotype, Receptors, Antigen, T-Cell, alpha-beta biosynthesis, Receptors, Antigen, T-Cell, gamma-delta biosynthesis, Receptors, Retinoic Acid genetics, Receptors, Thyroid Hormone genetics, Receptors, Tumor Necrosis Factor genetics, Reverse Transcriptase Polymerase Chain Reaction, Signal Transduction, T-Lymphocyte Subsets cytology, Thymus Gland cytology, Transcription Factors biosynthesis, Transcription Factors genetics, Tumor Necrosis Factor Ligand Superfamily Member 14, Tumor Necrosis Factor-alpha genetics, Up-Regulation, Lymphotoxin-alpha physiology, Receptors, Retinoic Acid physiology, Receptors, Thyroid Hormone physiology, Receptors, Tumor Necrosis Factor physiology, T-Lymphocyte Subsets immunology, T-Lymphocyte Subsets physiology, Thymus Gland immunology
- Abstract
The thymus gives rise to two T cell lineages, alphabeta and gammadelta, that are thought to develop independently of one another. Hence, double positive (DP) thymocytes expressing CD4 and CD8 coreceptors are usually viewed simply as progenitors of CD4+ and CD8+ alphabeta T cells. Instead we report that DP cells regulate the differentiation of early thymocyte progenitors and gammadelta cells, by a mechanism dependent on the transcription factor RORgt, and the lymphotoxin (LT) beta receptor (LTbetaR). This finding provokes a revised view of the thymus, in which lymphoid tissue induction-type processes coordinate the developmental and functional integration of the two T cell lineages.
- Published
- 2005
- Full Text
- View/download PDF
46. The integration of conventional and unconventional T cells that characterizes cell-mediated responses.
- Author
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Pennington DJ, Vermijlen D, Wise EL, Clarke SL, Tigelaar RE, and Hayday AC
- Subjects
- Animals, Cell Adhesion Molecules genetics, Cell Adhesion Molecules metabolism, Chemokines genetics, Chemokines metabolism, Cytokines genetics, Cytokines metabolism, Cytotoxicity, Immunologic, Gene Expression Profiling, Humans, Killer Cells, Natural immunology, Mice, Models, Immunological, Receptors, Antigen, T-Cell, gamma-delta metabolism, Immunity, Cellular genetics, T-Lymphocytes immunology
- Abstract
This review builds on evidence that cell-mediated immune responses to bacteria, viruses, parasites, and tumors are an integration of conventional and unconventional T-cell activities. Whereas conventional T cells provide clonal antigen-specific responses, unconventional T cells profoundly regulate conventional T cells, often suppressing their activities such that immunopathology is limited. By extrapolation, immunopathologies and inflammatory diseases may reflect defects in regulation by unconventional T cells. To explore the function of unconventional T cells, several extensive gene expression analyses have been undertaken. These studies are reviewed in some detail, with emphasis on the mechanisms by which unconventional T cells may exert their regulatory functions. Highlighting the fundamental nature of T-cell integration, we also review emerging data that the development of conventional and unconventional T cells is also highly integrated.
- Published
- 2005
- Full Text
- View/download PDF
47. How well do we prepare pediatric radiologists regarding child abuse? Results of a survey of recently trained fellows.
- Author
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Pennington DJ, Lonergan GJ, and Mendelson KL
- Subjects
- Child, Clinical Competence, Data Collection, Educational Status, Fellowships and Scholarships, Humans, Musculoskeletal System diagnostic imaging, Musculoskeletal System injuries, Radiography, Trauma, Nervous System diagnostic imaging, United States, Child Abuse, Education, Medical, Graduate, Pediatrics education, Radiology education
- Abstract
Background: Pediatric radiologists serve an important role in the radiologic diagnosis, investigation, and in legal proceedings in cases of child abuse. The Society for Pediatric Radiology should evaluate and insure the adequacy of training of pediatric radiologists for this important role., Objective: The Society for Pediatric Radiology Committee on Child Abuse, 2002, conducted a 24-question survey to evaluate the scope and perceived adequacy of training received by pediatric radiology fellows regarding the radiologic diagnosis of child abuse and the associated legal process., Materials and Methods: Eighty-four surveys were mailed to radiologists who had completed a year in pediatric radiology fellowship training during the years 1999 and 2000. There were 33 surveys returned for an overall response of 39%., Results: Respondents' perception of adequacy of training was best for the radiologic diagnosis of child abuse. The majority perceived they were not well trained in the investigative and legal processes regarding child abuse. The majority would welcome standardized training., Conclusion: Current pediatric radiology training programs do not sufficiently prepare pediatric radiologists for their role in the legal system regarding child abuse. A standardized program to train pediatric radiologists about the imaging diagnosis of child abuse and their role in the legal system is recommended.
- Published
- 2004
- Full Text
- View/download PDF
48. PKC epsilon is involved in JNK activation that mediates LPS-induced TNF-alpha, which induces apoptosis in macrophages.
- Author
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Comalada M, Xaus J, Valledor AF, López-López C, Pennington DJ, and Celada A
- Subjects
- Animals, Apoptosis drug effects, Bone Marrow Cells drug effects, Bone Marrow Cells enzymology, Bone Marrow Cells metabolism, Cells, Cultured, DNA Fragmentation drug effects, DNA Fragmentation physiology, Indoles pharmacology, Isoenzymes antagonists & inhibitors, Isoenzymes metabolism, MAP Kinase Kinase 4, Maleimides pharmacology, Mice, Mice, Inbred BALB C, Protein Kinase C antagonists & inhibitors, Protein Kinase C-epsilon, Apoptosis physiology, JNK Mitogen-Activated Protein Kinases, Lipopolysaccharides pharmacology, Macrophages metabolism, Mitogen-Activated Protein Kinase Kinases metabolism, Mitogen-Activated Protein Kinase Kinases physiology, Protein Kinase C metabolism, Tumor Necrosis Factor-alpha biosynthesis
- Abstract
Lipopolysaccharide (LPS) is a powerful stimulator of macrophages and induces apoptosis in these cells. Using primary cultures of bone marrow-derived macrophages, we found that the autocrine production of tumor necrosis factor-alpha (TNF-alpha) has a major function in LPS-induced apoptosis. LPS activates PKC and regulates the different mitogen-activated protein kinases (MAPK). We aimed to determine its involvement either in the secretion of TNF-alpha or in the induction of apoptosis. Using specific inhibitors and mice with the gene for PKCepsilon disrupted, we found that LPS-induced TNF-alpha-dependent apoptosis is mostly mediated by PKCepsilon, which is not directly involved in the signaling mechanism of apoptosis but rather in the process of TNF-alpha secretion. In our cell model, all three MAPKs were involved in the regulation of TNF-alpha secretion, but at different levels. JNK mainly regulates TNF-alpha transcription and apoptosis, whereas ERK and p38 contribute to the regulation of TNF-alpha production, probably through posttranscriptional mechanisms. Only JNK activity is mediated by PKCepsilon in response to LPS and so plays a major role in TNF-alpha secretion and LPS-induced apoptosis. We demonstrated in macrophages that LPS involving PKCepsilon regulates JNK activity and produces TNF-alpha, which induces apoptosis.
- Published
- 2003
- Full Text
- View/download PDF
49. The inter-relatedness and interdependence of mouse T cell receptor gammadelta+ and alphabeta+ cells.
- Author
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Pennington DJ, Silva-Santos B, Shires J, Theodoridis E, Pollitt C, Wise EL, Tigelaar RE, Owen MJ, and Hayday AC
- Subjects
- Animals, Cell Differentiation genetics, Cell Differentiation immunology, Cyclic AMP Response Element Modulator, DNA-Binding Proteins genetics, DNA-Binding Proteins immunology, Flow Cytometry, Gene Expression Profiling, Genes, T-Cell Receptor immunology, H-Y Antigen genetics, H-Y Antigen immunology, Male, Mice, Mice, Inbred C57BL, Mice, Knockout, Mice, Transgenic, RNA, Messenger biosynthesis, RNA, Messenger genetics, Receptors, Antigen, T-Cell, alpha-beta immunology, Receptors, Antigen, T-Cell, gamma-delta immunology, Reverse Transcriptase Polymerase Chain Reaction, T-Lymphocytes cytology, Genes, T-Cell Receptor genetics, Receptors, Antigen, T-Cell, alpha-beta genetics, Receptors, Antigen, T-Cell, gamma-delta genetics, Repressor Proteins, T-Lymphocytes immunology
- Abstract
Although T cell receptor (TCR)gammadelta+ and TCRalphabeta+ cells are commonly viewed as functionally independent, their relatedness and potential interdependence remain enigmatic. Here we have identified a gene profile that distinguishes mouse gammadelta cell populations from conventional alphabeta T cells. However, this profile was also expressed by sets of unconventional alphabeta T cells. Therefore, whereas TCR specificity determines the involvement of a T cell in an immune response, the cell's functional potential, as assessed by gene expression, does not segregate with the TCR. By monitoring the described gene profile, we show that gammadelta T cell development and function in TCRbeta-deficient mice was impaired because of the absence of alphabeta T cell progenitors. Thus, normal gammadelta cell development is dependent on the development of conventional alphabeta T cells.
- Published
- 2003
- Full Text
- View/download PDF
50. Genomics and immunology.
- Author
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Hayday AC, Pennington DJ, and Giuggio VM
- Subjects
- Humans, Immunity, Cellular genetics, Immunity, Cellular immunology, Immunogenetics, Ligands, Polymorphism, Genetic genetics, Protein Binding, Viruses immunology, Allergy and Immunology trends, Genomics methods, Genomics trends, Immunity genetics, Immunity immunology
- Published
- 2003
- Full Text
- View/download PDF
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