146 results on '"Oded, Gonen"'
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2. An integrative study of the microbiome gut-brain-axis and hippocampal inflammation in psychosis: Persistent effects from mode of birth
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Dolores Malaspina, Enrica Piras, Deborah Goetz, David S. Wallach, Eugene Ruby, Kevin W. Hoffman, Jakleen J. Lee, Mharisi Bonner, Oded Gonen, Sarah Fendrich, David Kimhy, Jose C. Clemente, Jessica Robinson-Papp, Emeka Boka, Peter Joe, and Brooke Remsen
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Oncology ,Psychosis ,medicine.medical_specialty ,Gut–brain axis ,Hippocampal formation ,Hippocampus ,Glutamates ,Internal medicine ,medicine ,Humans ,Microbiome ,Biological Psychiatry ,Inflammation ,Cesarean Section ,Mechanism (biology) ,business.industry ,Cognition ,Delivery, Obstetric ,medicine.disease ,Magnetic Resonance Imaging ,Gastrointestinal Microbiome ,Psychiatry and Mental health ,Autonomic nervous system ,Psychotic Disorders ,Schizophrenia ,Cytokines ,business - Abstract
The mechanism producing psychosis appears to include hippocampal inflammation, which could be associated with the microbiome-gut-brain-axis (MGBS). To test this hypothesis we are conducting a multidisciplinary study, herein described. The procedures are illustrated with testing of a single subject and group level information on the impact of C-section birth are presented. Method Study subjects undergo research diagnostic interviews and symptom assessments to be categorized into one of 3 study groups: psychosis, nonpsychotic affective disorder or healthy control. Hippocampal volume and metabolite concentrations are assessed using 3-dimensional, multi-voxel H1 Magnetic Resonance Imaging (MRSI) encompassing all gray matter in the entire hippocampal volume. Rich self-report information is obtained with the PROMIS interview, which was developed by the NIH Commons for research in chronic conditions. Early trauma is assessed and cognition is quantitated using the MATRICS. The method also includes the most comprehensive autonomic nervous system (ANS) battery used to date in psychiatric research. Stool and oral samples are obtained for microbiome assessments and cytokines and other substances are measured in blood samples. Results Group level preliminary data shows that C-section birth is associated with higher concentrations of GLX, a glutamate related hippocampal neurotransmitter in psychotic cases, worse symptoms in affective disorder cases and smaller hippocampal volume in controls. Conclusion Mode of birth appears to have persistent influences through adulthood. The methodology described for this study will define pathways through which the MGBA may influence the risk for psychiatric disorders.
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- 2022
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3. N-acetyl-aspartate levels correlate with intra-axonal compartment parameters from diffusion MRI.
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Elan J. Grossman, Ivan I. Kirov, Oded Gonen, Dmitry S. Novikov, Matthew S. Davitz, Yvonne W. Lui, Robert I. Grossman, Matilde Inglese, and Els Fieremans
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- 2015
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4. Gut and oral microbiome modulate molecular and clinical markers of schizophrenia-related symptoms: A transdiagnostic, multilevel pilot study
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Jakleen J. Lee, Enrica Piras, Sabrina Tamburini, Kevin Bu, David S. Wallach, Brooke Remsen, Adam Cantor, Jennifer Kong, Deborah Goetz, Kevin W. Hoffman, Mharisi Bonner, Peter Joe, Bridget R. Mueller, Jessica Robinson-Papp, Eyal Lotan, Oded Gonen, Dolores Malaspina, and Jose C. Clemente
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Psychiatry and Mental health ,Biological Psychiatry - Published
- 2023
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5. Global brain volume and N-acetyl-aspartate decline over seven decades of normal aging
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Achim Gass, Marc Sollberger, Lidia Glodzik, Andreas U. Monsch, Matthew S. Davitz, Oded Gonen, James S. Babb, Ivan I. Kirov, and Brian J. Soher
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Male ,0301 basic medicine ,In vivo magnetic resonance spectroscopy ,Aging ,Physiology ,Brain tissue ,Normal aging ,Age and sex ,Article ,Healthy Aging ,White matter ,03 medical and health sciences ,0302 clinical medicine ,Atrophy ,medicine ,Humans ,Gray Matter ,Aged ,Aged, 80 and over ,Aspartic Acid ,Sex Characteristics ,business.industry ,General Neuroscience ,Brain ,Organ Size ,Middle Aged ,N acetyl aspartate ,medicine.disease ,030104 developmental biology ,medicine.anatomical_structure ,Brain size ,Female ,Neurology (clinical) ,Geriatrics and Gerontology ,business ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
We characterize the whole-brain N-acetyl-aspartate (WBNAA) and brain tissue fractions across the adult lifespan and test the hypothesis that, despite age-related atrophy, neuronal integrity (reflected by WBNAA) is preserved in normal aging. Two-hundred-and-seven participants: 133 cognitively intact older adults (73.6 ± 7.4 mean ± standard deviation, range: 60–90 year old) and 84 young (37.9 ± 11, range: 21–59 year old) were scanned with proton magnetic resonance spectroscopy and T1-weighted MRI. Their WBNAA, fractional brain parenchyma, and gray and white matter volumes (fBPV, fGM, and fWM) were compared and modeled as functions of age and sex. Compared with young, older-adults’ WBNAA was lower by ~35%, and fBPV, fGM and fWM were lower by ~10%. Linear regressions found 0.5%/year WBNAA and 0.2%/year fBPV and fGM declines, whereas fWM rose to age ~40 years, and declined thereafter. fBPV and fGM were 1.8% and 4% higher in women, with no sex decline rates difference. We conclude that contrary to our hypothesis, atrophy was accompanied by WBNAA decline. Across the entire age range, women's brains showed less atrophy than men's. Formulas to estimate WBNAA and brain tissue fractions in healthy adults are provided to help differentiate normal from abnormal aging.
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- 2021
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6. Preliminary Findings Associate Hippocampal 1H-MR Spectroscopic Metabolite Concentrations with Psychotic and Manic Symptoms in Patients with Schizophrenia
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S.A. Perez, Julie Walsh-Messinger, Thorsten M. Kranz, E. Lotan, Oded Gonen, Dolores Malaspina, and Henry Rusinek
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medicine.medical_specialty ,Psychosis ,business.industry ,Metabolite ,Hippocampal formation ,medicine.disease ,Gastroenterology ,Pathophysiology ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,chemistry ,Schizophrenia ,Internal medicine ,mental disorders ,Cohort ,medicine ,Radiology, Nuclear Medicine and imaging ,In patient ,Neurology (clinical) ,medicine.symptom ,business ,Mania ,030217 neurology & neurosurgery - Abstract
BACKGROUND AND PURPOSE: Previous hippocampal proton MR spectroscopic imaging distinguished patients with schizophrenia from controls by elevated Cr levels and significantly more variable NAA and Cho concentrations. This goal of this study was to ascertain whether this metabolic variability is associated with clinical features of the syndrome, possibly reflecting heterogeneous hippocampal pathologies and perhaps variability in its “positive” (psychotic) and “negative” (social and emotional deficits) symptoms. MATERIALS AND METHODS: In a sample of 15 patients with schizophrenia according to the Diagnostic and Statistical Manual of Mental Disorders, Fourth Edition, we examined the association of NAA and Cho levels with research diagnostic interviews and clinical symptom ratings of the patients. Metabolite concentrations were previously obtained with 3D proton MR spectroscopic imaging at 3T, a technique that facilitates complete coverage of this small, irregularly shaped, bilateral, temporal lobe structure. RESULTS: The patient cohort comprised 8 men and 7 women (mean age, 39.1 [SD, 10.8] years, with a mean disease duration of 17.2 [SD, 10.8] years. Despite the relatively modest cohort size, we found the following: 1) Elevated Cho levels predict the positive (psychotic, r = 0.590, P = .021) and manic (r = 0.686, P = .005) symptom severity; and 2) lower NAA levels trend toward negative symptoms (r = 0.484, P = .08). No clinical symptoms were associated with Cr level or hippocampal volume (all, P ≥ .055). CONCLUSIONS: These preliminary findings suggest that NAA and Cho variations reflect different pathophysiologic processes, consistent with microgliosis/astrogliosis and/or lower vitality (reduced NAA) and demyelination (elevated Cho). In particular, the active state–related symptoms, including psychosis and mania, were associated with demyelination. Consequently, their deviations from the means of healthy controls may be a marker that may benefit precision medicine in selection and monitoring of schizophrenia treatment.
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- 2020
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7. Global average gray and white matter N-acetylaspartate concentration in the human brain.
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Matilde Inglese, Henry Rusinek, Ilena C. George, James S. Babb, Robert I. Grossman, and Oded Gonen
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- 2008
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8. Indirect evidence for early widespread gray matter involvement in relapsing-remitting multiple sclerosis.
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Matilde Inglese, Yulin Ge, Massimo Filippi, Andrea Falini, Robert I. Grossman, and Oded Gonen
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- 2004
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9. Quantitative multivoxel proton MR spectroscopy for the identification of white matter abnormalities in mild traumatic brain injury: Comparison between regional and global analysis
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Assaf Tal, Ivan I. Kirov, James S. Babb, Yvonne W. Lui, Matthew S. Davitz, and Oded Gonen
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Adult ,Male ,In vivo magnetic resonance spectroscopy ,Adolescent ,Traumatic brain injury ,Proton Magnetic Resonance Spectroscopy ,Population ,Partial volume ,Splenium ,Corpus callosum ,computer.software_genre ,Article ,030218 nuclear medicine & medical imaging ,White matter ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Voxel ,Brain Injuries, Traumatic ,Image Processing, Computer-Assisted ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,education ,Retrospective Studies ,education.field_of_study ,business.industry ,Middle Aged ,medicine.disease ,Magnetic Resonance Imaging ,White Matter ,Cross-Sectional Studies ,medicine.anatomical_structure ,Case-Control Studies ,Female ,business ,Nuclear medicine ,computer - Abstract
BACKGROUND 3D brain proton MR spectroscopic imaging (1 H MRSI) facilitates simultaneous metabolic profiling of multiple loci, at higher, sub-1 cm3 , spatial resolution than single-voxel 1 H MRS with the ability to separate tissue-type partial volume contribution(s). PURPOSE To determine if: 1) white matter (WM) damage in mild traumatic brain injury (mTBI) is homogeneously diffuse, or if specific regions are more affected; 2) partial-volume-corrected, structure-specific 1 H MRSI voxel averaging is sensitive to regional WM metabolic abnormalities. STUDY TYPE Retrospective cross-sectional cohort study. POPULATION Twenty-seven subjects: 15 symptomatic mTBI patients, 12 matched controls. FIELD STRENGTH/SEQUENCE 3T using 3D 1 H MRSI over a 360-cm3 volume of interest (VOI) centered over the corpus callosum, partitioned into 480 voxels, each 0.75 cm3 . ASSESSMENT N-acetyl-aspartate (NAA), creatine, choline, and myo-inositol concentrations estimated in predominantly WM regions: body, genu, and splenium of the corpus callosum, corona radiata, frontal, and occipital WM. STATISTICAL TESTS Analysis of covariance (ANCOVA) to compare patients with controls in terms of regional concentrations. The effect sizes (Cohen's d) of the mean differences were compared across regions and with previously published global data obtained with linear regression of the WM over the entire VOI in the same dataset. RESULTS Despite patients' global VOI WM NAA being significantly lower than the controls', no regional differences were observed for any metabolite. Regional NAA comparisons, however, were all unidirectional (patients' NAA concentrations < controls') within a narrow range: 0.3 ≤ Cohen's d ≤ 0.6. DATA CONCLUSION Since the patient group was symptomatic and exhibiting global WM NAA deficits, these findings suggest: 1) diffuse axonal mTBI damage; that is 2) below the 1 H MRSI detection threshold in small regions. Therefore, larger, ie, more sensitive, single-voxel 1 H MRS, placed anywhere in WM regions, may be well suited for mTBI 1 H MRS studies, given that these results are confirmed in other cohorts. LEVEL OF EVIDENCE 2 Technical Efficacy: Stage 3 J. Magn. Reson. Imaging 2019;50:1424-1432.
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- 2019
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10. Fast, regional three‐dimensional hybrid (1D‐Hadamard 2D‐rosette) proton MR spectroscopic imaging in the human temporal lobes
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Jullie W. Pan, Hoby P. Hetherington, Assaf Tal, Tiejun Zhao, Oded Gonen, and Claudiu Schirda
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Adult ,Male ,Proton Magnetic Resonance Spectroscopy ,Signal-To-Noise Ratio ,computer.software_genre ,Article ,Imaging phantom ,030218 nuclear medicine & medical imaging ,Young Adult ,03 medical and health sciences ,Imaging, Three-Dimensional ,0302 clinical medicine ,Nuclear magnetic resonance ,Voxel ,Hadamard transform ,Humans ,Computer Simulation ,Radiology, Nuclear Medicine and imaging ,Multislice ,Image resolution ,Spectroscopy ,Physics ,Phantoms, Imaging ,Magnetic resonance spectroscopic imaging ,Specific absorption rate ,Magnetic Resonance Imaging ,Temporal Lobe ,Molecular Medicine ,Female ,Radio frequency ,computer ,030217 neurology & neurosurgery - Abstract
(1)H-MRSI is commonly performed with gradient phase encoding, due to its simplicity and minimal radio frequency (RF) heating (specific absorption rate). Its two well-known main problems—(i) “voxel bleed” due to the intrinsic point-spread function, and (ii) chemical shift displacement error (CSDE) when slice-selective RF pulses are used, which worsens with increasing volume of interest (VOI) size—have long become accepted as unavoidable. Both problems can be mitigated with Hadamard multislice RF encoding. This is demonstrated and quantified with numerical simulations, in a multislice phantom and in five healthy young adult volunteers at 3 T, targeting a 2-cm thick temporal lobe VOI through the bilateral hippocampus. This frequently targeted region (e.g. in epilepsy and Alzheimer’s disease) is subject to strong, 1–2 ppm.cm(−1) regional B0, susceptibility gradients that can dramatically reduce the signal-to-noise ratio (SNR) and water suppression effectiveness. The chemical shift imaging (CSI) sequence used a 3-ms Shinnar–Le Roux (SLR) 90° RF pulse, acquiring eight steps in the slice direction. The Hadamard sequence acquired two overlapping slices using the same SLR 90° pulses, under twofold stronger gradients that proportionally halved the CSDE. Both sequences used 2D 20 × 20 rosette spectroscopic imaging (RSI) for in-plane spatial localization and both used RF and gradient performance characteristics that are easily met by all modern MRI instruments. The results show that Hadamard spectroscopic imaging (HSI) suffered dramatically less signal bleed within the VOI compared with CSI (50%) in a phantom specifically designed to test these effects. The voxels’ SNR per unit volume per unit time was also 40% higher for HSI. In a group of five healthy volunteers, we show that HSI with in-plane 2D-RSI facilitates fast, 3D multivoxel encoding at submilliliter spatial resolution, over the bilateral human hippocampus, in under 10 min, with negligible CSDE, spectral and spatial contamination and more than 6% improved SNR per unit time per unit volume.
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- 2021
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11. MR spectroscopic imaging at 3 T and outcomes in surgical epilepsy
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Joanna Fong, Arun Antony, Hoby P. Hetherington, Jullie W. Pan, Assaf Tal, Claud Schirda, Victor E. Yushmanov, Oded Gonen, Mark Richardson, and Anto Bagic
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Adult ,Male ,Magnetic Resonance Spectroscopy ,computer.software_genre ,Article ,030218 nuclear medicine & medical imaging ,Temporal lobe ,Young Adult ,03 medical and health sciences ,Epilepsy ,0302 clinical medicine ,Voxel ,Seizure control ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,In patient ,Gray Matter ,Spectroscopy ,Aspartic Acid ,Seizure frequency ,business.industry ,Field homogeneity ,Middle Aged ,medicine.disease ,Case-Control Studies ,Mr spectroscopic imaging ,Molecular Medicine ,Female ,business ,Nuclear medicine ,computer ,030217 neurology & neurosurgery - Abstract
For the spectroscopic assessment of brain disorders that require large-volume coverage, the requirements of RF performance and field homogeneity are high. For epilepsy, this is also challenging given the inter-patient variation in location, severity and subtlety of anatomical identification and its tendency to involve the temporal region. We apply a targeted method to examine the utility of large-volume MR spectroscopic imaging (MRSI) in surgical epilepsy patients, implementing a two-step acquisition, comprised of a 3D acquisition to cover the fronto-parietal regions, and a contiguous parallel two-slice Hadamard-encoded acquisition to cover the temporal-occipital region, both with T(R)/T(E) = 2000/40 ms and matched acquisition times. With restricted (static, first/second-order) B(0) shimming in their respective regions, the Cramér-Rao lower bounds for creatine from the temporal lobe two-slice Hadamard and frontal-parietal 3D acquisition are 8.1 ± 2.2% and 6.3 ± 1.9% respectively. The datasets are combined to provide a total 60 mm axial coverage over the frontal, parietal and superior temporal to middle temporal-occipital regions. We applied these acquisitions at a nominal 400 mm(3) voxel resolution in n = 27 pre-surgical epilepsy patients and n = 20 controls. In controls, 86.6 ± 3.2% voxels with at least 50% tissue (white + gray matter, excluding CSF) survived spectral quality inclusion criteria. Since all patients were clinically followed for at least 1 year after surgery, seizure frequency outcome was available for all. The MRSI measurements of the total fractional metabolic dysfunction (characterized by the Cr/NAA metric) in FreeSurfer MRI gray matter segmented regions, in the patients compared with the controls, exhibited a significant Spearman correlation with post-surgical outcome. This finding suggests that a larger burden of metabolic dysfunction is seen in patients with poorer post-surgical seizure control.
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- 2021
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12. Patient-reported exposures and outcomes link the gut-brain axis and inflammatory pathways to specific symptoms of severe mental illness
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Sarah J Fendrich, Lauren R Koralnik, Mharisi Bonner, Deborah Goetz, Peter Joe, Jakleen Lee, Bridget Mueller, Jessica Robinson-Papp, Oded Gonen, Jose C. Clemente, and Dolores Malaspina
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Psychiatric Status Rating Scales ,Psychiatry and Mental health ,Psychopathology ,Psychotic Disorders ,Mental Disorders ,Brain-Gut Axis ,Humans ,Patient Reported Outcome Measures ,Biological Psychiatry - Abstract
We developed a "gut-brain-axis questionnaire" (GBAQ) to obtain standardized person-specific "review of systems" data for microbiome-gut-brain-axis studies. Individual items were compared to PANSS symptom measures using dimensional, transdiagnostic and traditional categorical approaches.Forty psychotic participants, independent of diagnoses, and 42 without psychosis (18 nonpsychotic affective disorders, 24 healthy controls) completed the GBAQ and underwent research diagnostic and symptom assessments. The PANSS scales and its dysphoric mood, autistic preoccupation and activation factors were computed.Transdiagnostic analyses robustly linked psychosis severity to constipation (p.001), and Negative (p=.045) and General Psychopathology scores (p=.016) with bowel hypomotility. Activation factor scores predicted numbers of psychiatric (p=.009) and medical conditions (p=.003), BMI (p=.003), skin (p.001) and other conditions. Categorical analyses comparing psychotic, nonpsychotic and control groups revealed behavioral differences: cigarette smoking (p=.013), alcohol use (p=.007), diet (p's.05), exercise (p.001). All subjects accurately self-reported their diagnosis.The GBAQ is a promising tool. Transdiagnostic analyses associated psychotic symptoms to gut hypomotility, indicative of low gut vagal tone, consistent with reduced cardiovagal activity in psychosis. Activation, similar to delirium symptoms, predicted medical comorbidity and systemic inflammatory conditions. Group level comparisons only showed behavioral differences. Underpinnings of psychiatric disorders may include reduced gut vagal function, producing psychosis, and systemic inflammation, impacting risks for psychotic and nonpsychotic conditions.
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- 2022
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13. Hippocampal metabolite concentrations in schizophrenia vary in association with rare gene variants in the TRIO gene
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Haley Rhodes, Adriana Heguy, Moses V. Chao, Julie Walsh-Messinger, Kevin W. Hoffman, Oded Gonen, Thorsten M. Kranz, and Dolores Malaspina
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Genetics ,Metabolite ,Hippocampal formation ,Biology ,medicine.disease ,Hippocampus ,Polymorphism, Single Nucleotide ,Psychiatry and Mental health ,chemistry.chemical_compound ,chemistry ,Schizophrenia ,medicine ,Autism ,Humans ,Association (psychology) ,Gene ,Biological Psychiatry - Published
- 2020
14. Hippocampal Metabolite Concentrations in A Schizophrenia Case Series Vary in Association With Rare Gene Variants For Schizophrenia Versus Autism
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Thorsten M. Kranz, Kevin W. Hoffmann, Dolores Malaspina, Oded Gonen, Haley Rhodes, Moses V. Chao, and Adriana Heguy
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Genetics ,business.industry ,Metabolite ,Hippocampal formation ,medicine.disease ,chemistry.chemical_compound ,chemistry ,Schizophrenia ,mental disorders ,medicine ,Autism ,Association (psychology) ,business ,Gene - Abstract
BackgroundRare variants in the TRIO gene are associated with schizophrenia and autism spectrum disorders (ASD), which are commonly comorbid. ASD may define a specific schizophrenia subtype. This study examined person-specific hippocampal metabolite concentrations for 4 schizophrenia cases harboring rare variants in TRIO or its interaction partner ARMS/KIDINS220 and 5 cases with other rare variants.MethodsNine of 19 cases from a prior imaging study underwent targeted exome sequencing. Multi-voxel 1H-MRS imaging of the entire 3-dimensional hippocampus found only increased Creatine [Cr] (cellular energy use) concentration, distinguished cases at the group level. However, concentrations of N-acetyl-aspartate [NAA] (neuronal integrity) and choline [Cho] (membrane turnover/myelination) concentrations had a greater variance in cases than controls.ResultsFour cases with rare, missense-coding mutations or non-frameshift deletions in TRIO or ARMS/KIDINS220 had significantly lower [Cho] than the other 5 (1.78 ± 0.18 mM versus 2.67 ± 0.8 mM: t = 3.55, p = 0.005) but similar [NAA]. Two cases harboring rare variants in the SLC39A1 zinc transporter had the lowest [NAA]. (8.41 ± 0 80 mM versus 10.35 ± 2.03 mM, t = 4.52, p = 0.001). The highest [Cho] accompanied rare variants in SORCS2 and SORT, associated with schizophrenia and Alzheimer’s Disease.LimitationsThis preliminary study of a small sample of exceptionally well characterized cases requires replication in larger samples for clinical utility.ConclusionsThe hippocampus is vulnerable to more than one pathology causing schizophrenia. TRIO rare variants predicted significantly lower Cho, indicating reduced myelin. [Cho] and [NAA] may have importance for choosing and monitoring schizophrenia treatment.
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- 2020
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15. Quantitative Proton Spectroscopy of the Testes at 3 T
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Rajesh Bhatta, Andrew B. Rosenkrantz, Oded Gonen, Kiranpreet K. Khurana, Pippa Storey, Joseph P. Alukal, and Tiejun Zhao
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Adult ,Male ,medicine.medical_specialty ,Magnetic Resonance Spectroscopy ,Proton ,Metabolite ,Creatine ,Article ,Choline ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Internal medicine ,Testis ,Mole ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Spermatogenesis ,Spectroscopy ,Azoospermia ,030219 obstetrics & reproductive medicine ,General Medicine ,Middle Aged ,medicine.disease ,Endocrinology ,chemistry ,Evaluation Studies as Topic ,Infertility ,Female ,Biomarkers ,Inositol - Abstract
Objectives The aim of this study was to compare testicular metabolite concentrations between fertile control subjects and infertile men. Materials and methods Single voxel proton magnetic resonance spectroscopy (H-MRS) was performed in the testes with and without water suppression at 3 T in 9 fertile control subjects and 9 infertile patients (8 with azoospermia and 1 with oligospermia). In controls only, the T1 and T2 values of water and metabolites were also measured. Absolute metabolite concentrations were calculated using the unsuppressed water signal as a reference and correcting for the relative T1 and T2 weighting of the water and metabolite signals. Results Testicular T1 values of water, total choline, and total creatine were 2028 ± 125 milliseconds, 1164 ± 105 milliseconds, and 1421 ± 314 milliseconds, respectively (mean ± standard deviation). T2 values were 154 ± 11 milliseconds, 342 ± 53 milliseconds, and 285 ± 167 milliseconds, respectively. Total choline concentration was lower in patients (mean, 1.5 mmol/L; range, 0.9-2.1 mmol/L) than controls (mean, 4.4 mmol/L; range, 3.2-5.7 mmol/L; P = 4 × 10). Total creatine concentration was likewise reduced in patients (mean, 1.1 mmol/L; range, undetectable -2.7 mmol/L) compared with controls (mean, 3.6 mmol/L; range, 2.5-4.7 mmol/L; P = 1.6 × 10). The myo-inositol signal normalized to the water reference was also lower in patients than controls (P = 4 × 10). Conclusions Testicular metabolite concentrations, measured by proton spectroscopy at 3 T, may be valuable as noninvasive biomarkers of spermatogenesis.
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- 2018
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16. Diagnosis of Normal-Pressure Hydrocephalus: Use of Traditional Measures in the Era of Volumetric MR Imaging
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Nityanand Miskin, Alexander Le, Hersh Patel, Ana M. Franceschi, Oded Gonen, James Golomb, Henry Rusinek, Ajax E. George, Christian Stanton, Yafell Serulle, Brianna E. Damadian, and Benjamin Ades-Aron
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Adult ,Male ,medicine.medical_specialty ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Normal pressure hydrocephalus ,Image Interpretation, Computer-Assisted ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Screening tool ,Prospective Studies ,Aged ,Original Research ,Aged, 80 and over ,Extramural ,business.industry ,Brain ,Middle Aged ,medicine.disease ,Magnetic Resonance Imaging ,Mr imaging ,Hydrocephalus, Normal Pressure ,3. Good health ,Hydrocephalus ,Female ,Radiology ,Evans index ,business ,030217 neurology & neurosurgery ,Alzheimer's Disease Neuroimaging Initiative - Abstract
Purpose To assess the diagnostic performance of the callosal angle (CA) and Evans index (EI) measures and to determine their role versus automated volumetric methods in clinical radiology. Materials and Methods Magnetic resonance (MR) examinations performed before surgery (within 1-5 months of the MR examination) in 36 shunt-responsive patients with normal-pressure hydrocephalus (NPH; mean age, 75 years; age range, 58-87 years; 26 men, 10 women) and MR examinations of age- and sex-matched patients with Alzheimer disease (n = 34) and healthy control volunteers (n = 36) were studied. Three blinded observers independently measured EI and CA for each patient. Volumetric segmentation of global gray matter, white matter, ventricles, and hippocampi was performed by using software. These measures were tested by using multivariable logistic regression models to determine which combination of metrics is most accurate in diagnosis. Results The model that used CA and EI demonstrated 89.6%-93.4% accuracy and average area under the curve of 0.96 in differentiating patients with NPH from patients without NPH (ie, Alzheimer disease and healthy control). The regression model that used volumetric predictors of gray matter and white matter was 94.3% accurate. Conclusion CA and EI may serve as a screening tool to help the radiologist differentiate patients with NPH from patients without NPH, which would allow for designation of patients for further volumetric assessment.
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- 2017
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17. Proton MR spectroscopy of lesion evolution in multiple sclerosis: Steady-state metabolism and its relationship to conventional imaging
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Joseph Herbert, Ivan I. Kirov, Matthew S. Davitz, James S. Babb, Shu Liu, Oded Gonen, William E. Wu, Assaf Tal, and Henry Rusinek
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Pathology ,medicine.medical_specialty ,Context (language use) ,Creatine ,030218 nuclear medicine & medical imaging ,Lesion ,White matter ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,medicine ,Radiology, Nuclear Medicine and imaging ,Radiological and Ultrasound Technology ,medicine.diagnostic_test ,business.industry ,Multiple sclerosis ,Magnetic resonance imaging ,medicine.disease ,Hyperintensity ,Astrogliosis ,medicine.anatomical_structure ,Neurology ,chemistry ,Neurology (clinical) ,Anatomy ,medicine.symptom ,business ,Nuclear medicine ,030217 neurology & neurosurgery - Abstract
Although MRI assessment of white matter lesions is essential for the clinical management of multiple sclerosis, the processes leading to the formation of lesions and underlying their subsequent MRI appearance are incompletely understood. We used proton MR spectroscopy to study the evolution of N-acetyl-aspartate (NAA), creatine (Cr), choline (Cho), and myo-inositol (mI) in pre-lesional tissue, persistent and transient new lesions, as well as in chronic lesions, and related the results to quantitative MRI measures of T1-hypointensity and T2-volume. Within 10 patients with relapsing-remitting course, there were 180 regions-of-interest consisting of up to seven semi-annual follow-ups of normal-appearing white matter (NAWM, n = 10), pre-lesional tissue giving rise to acute lesions which resolved (n = 3) or persisted (n = 3), and of moderately (n = 9) and severely hypointense (n = 6) chronic lesions. Compared with NAWM, pre-lesional tissue had higher Cr and Cho, while compared with lesions, pre-lesional tissue had higher NAA. Resolving acute lesions showed similar NAA levels pre- and post-formation, suggesting no long-term axonal damage. In chronic lesions, there was an increase in mI, suggesting accumulating astrogliosis. Lesion volume was a better predictor of axonal health than T1-hypointensity, with lesions larger than 1.5 cm3 uniformly exhibiting very low (
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- 2017
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18. Role of High-Resolution Dynamic Contrast-Enhanced MRI with Golden-Angle Radial Sparse Parallel Reconstruction to Identify the Normal Pituitary Gland in Patients with Macroadenomas
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Douglas Kondziolka, Vinay Prabhu, Rajeev Sen, Kai Tobias Block, Oded Gonen, J. Pack, Fernando E. Boada, John G. Golfinos, Girish M. Fatterpekar, and Chandranath Sen
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Adenoma ,Adult ,Male ,Pituitary gland ,Contrast Media ,High resolution ,Enhancement pattern ,Article ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Text mining ,Permeability measurements ,Humans ,Medicine ,Pituitary Neoplasms ,Radiology, Nuclear Medicine and imaging ,In patient ,Aged ,Retrospective Studies ,business.industry ,Anatomy ,Middle Aged ,Magnetic Resonance Imaging ,medicine.anatomical_structure ,Pituitary Gland ,Dynamic contrast-enhanced MRI ,Female ,Neurology (clinical) ,Golden angle ,Nuclear medicine ,business ,030217 neurology & neurosurgery - Abstract
Background and purpose Preoperative localization of the pituitary gland with imaging in patients with macroadenomas has been inadequately explored. The pituitary gland enhancing more avidly than a macroadenoma has been described in the literature. Taking advantage of this differential enhancement pattern, our aim was to evaluate the role of high-resolution dynamic MR imaging with golden-angle radial sparse parallel reconstruction in localizing the pituitary gland in patients undergoing trans-sphenoidal resection of a macroadenoma. Materials and methods A retrospective study was performed in 17 patients who underwent trans-sphenoidal surgery for pituitary macroadenoma. Radial volumetric interpolated brain examination sequences with golden-angle radial sparse parallel technique were obtained. Using an ROI-based method to obtain signal-time curves and permeability measures, 3 separate readers identified the normal pituitary gland distinct from the macroadenoma. The readers' localizations were then compared with the intraoperative location of the gland. Statistical analyses were performed to assess the interobserver agreement and correlation with operative findings. Results The normal pituitary gland was found to have steeper enhancement-time curves as well as higher peak enhancement values compared with the macroadenoma (P Conclusions This study confirms our ability to consistently and accurately identify the normal pituitary gland in patients with macroadenomas with the golden-angle radial sparse parallel technique with quantitative permeability measurements and enhancement-time curves.
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- 2017
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19. Putamen Inflammation and its Association With Working Memory Impairments in Schizophrenia Spectrum Disorders
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Mariana Lazar, Donald C. Goff, Pradeep Kumar Gupta, Oded Gonen, and Hilary Bertisch
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Working memory ,business.industry ,Putamen ,medicine ,Inflammation ,medicine.symptom ,Association (psychology) ,business ,Neuroscience ,Biological Psychiatry ,Schizophrenia spectrum - Published
- 2020
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20. MR Imaging Applications in Mild Traumatic Brain Injury: An Imaging Update
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Robert I. Grossman, Yvonne W. Lui, Yulin Ge, Xin Wu, Ivan I. Kirov, and Oded Gonen
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Adult ,In vivo magnetic resonance spectroscopy ,medicine.medical_specialty ,Magnetic Resonance Spectroscopy ,Traumatic brain injury ,Iron ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Concussion ,medicine ,Humans ,Functional mr ,Radiology, Nuclear Medicine and imaging ,Brain Chemistry ,Memory Disorders ,medicine.diagnostic_test ,business.industry ,Brain ,Magnetic resonance imaging ,medicine.disease ,Magnetic Resonance Imaging ,Mr imaging ,Diffusion imaging ,Reviews and Commentary ,Diffusion Magnetic Resonance Imaging ,Magnetic Fields ,Attention Deficit Disorder with Hyperactivity ,Positron emission tomography ,Brain Injuries ,Positron-Emission Tomography ,Female ,Radiology ,business ,Intracranial Hemorrhages ,030217 neurology & neurosurgery - Abstract
Mild traumatic brain injury (mTBI), also commonly referred to as concussion, affects millions of Americans annually. Although computed tomography is the first-line imaging technique for all traumatic brain injury, it is incapable of providing long-term prognostic information in mTBI. In the past decade, the amount of research related to magnetic resonance (MR) imaging of mTBI has grown exponentially, partly due to development of novel analytical methods, which are applied to a variety of MR techniques. Here, evidence of subtle brain changes in mTBI as revealed by these techniques, which are not demonstrable by conventional imaging, will be reviewed. These changes can be considered in three main categories of brain structure, function, and metabolism. Macrostructural and microstructural changes have been revealed with three-dimensional MR imaging, susceptibility-weighted imaging, diffusion-weighted imaging, and higher order diffusion imaging. Functional abnormalities have been described with both task-mediated and resting-state blood oxygen level-dependent functional MR imaging. Metabolic changes suggesting neuronal injury have been demonstrated with MR spectroscopy. These findings improve understanding of the true impact of mTBI and its pathogenesis. Further investigation may eventually lead to improved diagnosis, prognosis, and management of this common and costly condition. (©) RSNA, 2016.
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- 2016
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21. Whole-BrainN-Acetylaspartate Concentration Is Preserved during Mild Hypercapnia Challenge
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Hanzhang Lu, Grish Fatterpekar, Sanjeev Chawla, Yulin Ge, Oded Gonen, Matthew S. Davitz, Brian J. Soher, and Olga Marshall
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Adult ,Male ,Magnetic Resonance Spectroscopy ,chemistry.chemical_element ,Vasodilation ,Oxygen ,Article ,Hypercapnia ,Young Adult ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Normocapnia ,N-acetylaspartate ,Brain Chemistry ,Aspartic Acid ,Breathing room air ,business.industry ,Brain ,Proton mr spectroscopy ,nervous system ,chemistry ,Anesthesia ,Breathing ,Neurology (clinical) ,medicine.symptom ,business - Abstract
BACKGROUND AND PURPOSE: Although NAA is often used as a marker of neuronal health and integrity in neurologic disorders, its normal response to physiologic challenge is not well-established and its changes are almost always attributed exclusively to brain pathology. The purpose of this study was to test the hypothesis that the neuronal cell marker NAA, often used to assess neuronal health and integrity in neurologic disorders, is not confounded by (possibly transient) physiologic changes. Therefore, its decline, when observed by using 1H-MR spectroscopy, can almost always be attributed exclusively to brain pathology. MATERIALS AND METHODS: Twelve healthy young male adults underwent a transient hypercapnia challenge (breathing 5% CO2 air mixture), a potent vasodilator known to cause a substantial increase in CBF and venous oxygenation. We evaluated their whole-brain NAA by using nonlocalizing proton MR spectroscopy, venous oxygenation with T2-relaxation under spin-tagging MR imaging, CBF with pseudocontinuous arterial spin-labeling, and the cerebral metabolic rate of oxygen, during normocapnia (breathing room air) and hypercapnia. RESULTS: There was insignificant whole-brain NAA change ( P = .88) from normocapnia to hypercapnia and back to normocapnia in this cohort, as opposed to highly significant increases: 28.0 ± 10.3% in venous oxygenation and 49.7 ± 16.6% in global CBF ( P < 10−4); and a 6.4 ± 10.9% decrease in the global cerebral metabolic rate of oxygen ( P = .04). CONCLUSIONS: Stable whole-brain NAA during normocapnia and hypercapnia, despite significant global CBF and cerebral metabolic rate of oxygen changes, supports the hypothesis that global NAA changes are insensitive to transient physiology. Therefore, when observed, they most likely reflect underlying pathology resulting from neuronal cell integrity/viability changes, instead of a response to physiologic changes. CMRO2 : cerebral metabolic rate of oxygen consumption pCASL : pseudocontinuous arterial spin-labeling TRUST : T2-relaxation under spin-tagging WBNAA : whole-brain NAA Yv : venous oxygenation
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- 2015
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22. High-Resolution DCE-MRI of the Pituitary Gland Using Radialk-Space Acquisition with Compressed Sensing Reconstruction
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Kai Tobias Block, Matthew A Haber, Lev Bangiyev, James Babb, Fernando E. Boada, V. Ruggiero, Girish M. Fatterpekar, M.C. Rossi Espagnet, and Oded Gonen
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Adenoma ,Adult ,Male ,Pituitary gland ,Pituitary neoplasm ,Article ,Capillary Permeability ,Anterior pituitary ,Posterior pituitary ,Image Interpretation, Computer-Assisted ,medicine ,Humans ,Pituitary Neoplasms ,Radiology, Nuclear Medicine and imaging ,Retrospective Studies ,medicine.diagnostic_test ,business.industry ,Magnetic resonance imaging ,k-space ,Anatomy ,Middle Aged ,Data Compression ,Image Enhancement ,medicine.disease ,Magnetic Resonance Imaging ,adenoma ,adult ,data compression ,female ,humans ,image enhancement ,medicine.anatomical_structure ,Pituitary Gland ,Median eminence ,Female ,Neurology (clinical) ,business ,Biomedical engineering - Abstract
BACKGROUND AND PURPOSE: The pituitary gland is located outside of the blood-brain barrier. Dynamic T1 weighted contrast enhanced sequence is considered to be the gold standard to evaluate this region. However, it does not allow assessment of intrinsic permeability properties of the gland. Our aim was to demonstrate the utility of radial volumetric interpolated brain examination with the golden-angle radial sparse parallel technique to evaluate permeability characteristics of the individual components (anterior and posterior gland and the median eminence) of the pituitary gland and areas of differential enhancement and to optimize the study acquisition time. MATERIALS AND METHODS: A retrospective study was performed in 52 patients (group 1, 25 patients with normal pituitary glands; and group 2, 27 patients with a known diagnosis of microadenoma). Radial volumetric interpolated brain examination sequences with golden-angle radial sparse parallel technique were evaluated with an ROI-based method to obtain signal-time curves and permeability measures of individual normal structures within the pituitary gland and areas of differential enhancement. Statistical analyses were performed to assess differences in the permeability parameters of these individual regions and optimize the study acquisition time. RESULTS: Signal-time curves from the posterior pituitary gland and median eminence demonstrated a faster wash-in and time of maximum enhancement with a lower peak of enhancement compared with the anterior pituitary gland ( P < .005). Time-optimization analysis demonstrated that 120 seconds is ideal for dynamic pituitary gland evaluation. In the absence of a clinical history, differences in the signal-time curves allow easy distinction between a simple cyst and a microadenoma. CONCLUSIONS: This retrospective study confirms the ability of the golden-angle radial sparse parallel technique to evaluate the permeability characteristics of the pituitary gland and establishes 120 seconds as the ideal acquisition time for dynamic pituitary gland imaging. GRASP : golden-angle radial sparse parallel STC : signal-time curve VIBE : volumetric interpolated brain examination
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- 2015
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23. Early glial activation precedes neurodegeneration in the cerebral cortex after SIV infection: A 3D, multivoxel proton magnetic resonance spectroscopy study
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James S. Babb, E-M Ratai, RG Gonzalez, Ivan I. Kirov, Oded Gonen, Assaf Tal, William E. Wu, and Ajax E. George
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Pathology ,medicine.medical_specialty ,medicine.diagnostic_test ,business.industry ,Health Policy ,Neurodegeneration ,Magnetic resonance imaging ,Grey matter ,Creatine ,medicine.disease ,White matter ,chemistry.chemical_compound ,Infectious Diseases ,medicine.anatomical_structure ,chemistry ,Cerebral cortex ,Cortex (anatomy) ,medicine ,Neuroglia ,Pharmacology (medical) ,business - Abstract
Objectives As ∼40% of HIV-infected individuals experience neurocognitive decline, we investigated whether proton magnetic resonance spectroscopic imaging (1H-MRSI) detects early metabolic abnormalities in the cerebral cortex of a simian immunodeficiency virus (SIV)-infected rhesus monkey model of neuroAIDS. Methods The brains of five rhesus monkeys before and 4 or 6 weeks after SIV infection (with CD8+ T-cell depletion) were assessed with T2-weighted quantitative magnetic resonance imaging (MRI) and 16×16×4 multivoxel 1H-MRSI (echo time/repetition time = 33/1440 ms). Grey matter and white matter masks were segmented from the animal MRIs and used to produce cortical masks co-registered to 1H-MRSI data to yield cortical metabolite concentrations of the glial markers myo-inositol (mI), creatine (Cr) and choline (Cho), and of the neuronal marker N-acetylaspartate (NAA). The cortex volume within the large, 28 cm3 (∼35% of total monkey brain) volume of interest was also calculated for each animal pre- and post-infection. Mean metabolite concentrations and cortex volumes were compared pre- and post-infection using paired sample t-tests. Results The mean (± standard deviation) pre-infection concentrations of the glial markers mI, Cr and Cho were 5.8 ± 0.9, 7.2 ± 0.4 and 0.9 ± 0.1 mM, respectively; these concentrations increased 28% (p ≈ 0.06), 15% and 10% (both p
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- 2015
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24. Whole brain neuronal abnormalities in focal epilepsy quantified with proton MR spectroscopy
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Hoby P. Hetherington, James S. Babb, Ivan I. Kirov, Heath R. Pardoe, Matthew S. Davitz, Ruben Kuzniecky, Oded Gonen, Jullie W. Pan, and Brian J. Soher
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Adult ,Male ,Proton Magnetic Resonance Spectroscopy ,Creatine ,Article ,030218 nuclear medicine & medical imaging ,White matter ,Cohort Studies ,03 medical and health sciences ,chemistry.chemical_compound ,Epilepsy ,Young Adult ,0302 clinical medicine ,Atrophy ,Medicine ,Choline ,Humans ,Ictal ,Aspartic Acid ,business.industry ,Brain ,Organ Size ,Middle Aged ,medicine.disease ,Magnetic Resonance Imaging ,Proton mr spectroscopy ,medicine.anatomical_structure ,Neurology ,chemistry ,Brain size ,Female ,Neurology (clinical) ,Epilepsies, Partial ,business ,Nuclear medicine ,030217 neurology & neurosurgery - Abstract
Objective To test the hypothesis that localization-related epilepsy is associated with widespread neuronal dysfunction beyond the ictal focus, reflected by a decrease in patients’ global concentration of their proton MR spectroscopy (1H-MRS) observed marker, N-acetyl-aspartate (NAA). Methods Thirteen patients with localization-related epilepsy (7 men, 6 women) 40 ± 13 (mean ± standard-deviation) years old, 8.3 ± 13.4 years of disease duration; and 14 matched controls, were scanned at 3 T with MRI and whole-brain (WB) 1H MRS. Intracranial fractions of brain volume, gray and white matter (fBV, fGM, fWM) were segmented from the MRI, and global absolute NAA creatine (Cr) and choline (Cho) concentrations were estimated from their WB 1H MRS. These metrics were compared between patients and controls using an unequal variance t test. Results Patients’ fBV, fGM and fWM: 0.81 ± 0.07, 0.47 ± 0.04, 0.31 ± 0.04 were not different from controls’ 0.79 ± 0.05, 0.48 ± 0.04, 0.32 ± 0.02; nor were their Cr and Cho concentrations: 7.1 ± 1.1 and 1.3 ± 0.2 millimolar (mM) versus 7.7 ± 0.7 and 1.4 ± 0.1 mM (p > 0.05 all). Patients’ global NAA concentration: 11.5 ± 1.5 mM, however, was 12% lower than controls’ 13.0 ± 0.8 mM (p = 0.004). Conclusions These findings indicate that neuronal dysfunction in localization-related epilepsy extends globally, beyond the ictal zone, but without atrophy or spectroscopic evidence of other pathology. This suggests a diffuse decline in the neurons’ health, rather than their number, early in the disease course. WB 1H-MRS assessment, therefore, may be a useful tool for quantification of global neuronal dysfunction load in epilepsy.
- Published
- 2017
25. Hypo-metabolism of the rostral anterior cingulate cortex associated with working memory impairment in 18 cases of schizophrenia
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Karen Rothman, Raymond R. Goetz, Assaf Tal, Dolores Malaspina, Oded Gonen, Robert Mazgaj, Julie W. Messinger, and Mariana Lazar
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Male ,Aging ,Proton Magnetic Resonance Spectroscopy ,Neuropsychological Tests ,Behavioral Neuroscience ,chemistry.chemical_compound ,0302 clinical medicine ,Gliosis ,Intelligence Tests ,Sex Characteristics ,Neuropsychology ,Wechsler Adult Intelligence Scale ,Middle Aged ,Psychiatry and Mental health ,medicine.anatomical_structure ,Memory, Short-Term ,Neurology ,Schizophrenia ,Female ,Schizophrenic Psychology ,medicine.symptom ,Psychology ,Sex characteristics ,Adult ,medicine.medical_specialty ,Cognitive Neuroscience ,Creatine ,behavioral disciplines and activities ,Gyrus Cinguli ,Article ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,Young Adult ,Internal medicine ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Anterior cingulate cortex ,Retrospective Studies ,Aspartic Acid ,Memory Disorders ,Working memory ,medicine.disease ,030227 psychiatry ,Endocrinology ,nervous system ,chemistry ,Neurology (clinical) ,Neuroscience ,030217 neurology & neurosurgery ,Inositol - Abstract
Working memory (Work-Mem), the capacity to hold and manipulate information, activates the anterior cingulate cortex (ACC), especially its caudal subregion. Impaired Work-Mem and structural and functional abnormalities of the ACC are reported in schizophrenia. This study aims to elucidate the pathogenesis of Work-Mem dysfunction in schizophrenia by comparing metabolite concentrations across ACC subregions. This retrospective study of 18 schizophrenia cases and 10 matched controls used proton magnetic resonance spectroscopic imaging ((1)H-MRSI, TR/TE = 1800/35 ms, 0.5 cm(3) spatial resolution) to test whether the Work-Mem Index of the Wechsler Adult Intelligence Scale, third edition is associated with differences in the rostral to caudal ACC ratios of N-acetylaspartate (NAA) and creatine (Cr). Higher caudal:rostral ACC Cr (but not NAA) concentrations were associated with decreased Work-Mem Index in cases (r = -0.6, p = 0.02), with a similar trend in controls (r = -0.56, p = 0.10), although caudal:rostral ACC Cr correlated with NAA in cases and controls (r = 0.67 and 0.62, p0.05 for both). NAA and Cr ratios did not correlate with myo-inositol, excluding gliosis as the underlying process. Subjects' sex and age had no effects on these relationships. The findings suggest that rostral ACC energy hypo-metabolism, possibly arising from neurodevelopmental processes, is associated with working memory impairment in schizophrenia. Changes in the rostral (not the expected caudal) subregion underscore the interconnections between the ACC subregions and may offer laboratory markers for treatment trials, etiology studies, and perhaps even enhanced identification of prodromal "at risk" subjects.
- Published
- 2017
26. Global N-Acetylaspartate in Normal Subjects, Mild Cognitive Impairment and Alzheimer's Disease Patients
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Achim Gass, Henry Rusinek, Jochen G. Hirsch, Lidia Glodzik, Oded Gonen, James S. Babb, Amit Gokhale, Andreas U. Monsch, Marc Sollberger, and Michael Amann
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Male ,medicine.medical_specialty ,Magnetic Resonance Spectroscopy ,Urology ,Disease ,Sensitivity and Specificity ,Article ,Atrophy ,Alzheimer Disease ,mental disorders ,medicine ,Humans ,Cognitive Dysfunction ,Cognitive impairment ,N-acetylaspartate ,Aged ,Aged, 80 and over ,Aspartic Acid ,General Neuroscience ,Curve analysis ,Brain ,General Medicine ,Middle Aged ,medicine.disease ,Proton mr spectroscopy ,Psychiatry and Mental health ,Clinical Psychology ,Brain size ,Female ,Geriatrics and Gerontology ,Alzheimer's disease ,Psychology ,human activities ,Neuroscience ,Biomarkers - Abstract
Background: Mild cognitive impairment (MCI) is an intermediary state on the way to Alzheimer’s disease (AD). Little is known about whole brain concentration of the neuronal marker, N-acetylaspartate (NAA) in MCI patients. Objective: To test the hypothesis that since MCI and AD are both neurodegenerative, quantification of the NAA in their whole brain (WBNAA) could differentiate them from cognitively-intact matched controls. Methods: Proton MR spectroscopy to quantify the WBNAA was applied to 197 subjects (86 females) 72.6 ± 8.4 years old (mean ± standard deviation). Of these, 102 were cognitively intact, 42 diagnosed as MCI, and 53 as probable AD. Their WBNAA amounts were converted into absolute concentration by dividing with the brain volume segmented from the MRI that also yielded the fractional brain volume (fBPV), an atrophy metric. Results: WBNAA concentration of MCI and AD patients (10.5 ± 3.0 and 10.1 ± 2.9 mM) were not significantly different (p = 0.85). They were, however, highly significantly 25–29% lower than the 14.1 ± 2.4 mM of normal matched controls (p
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- 2014
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27. Automated whole-brainN-acetylaspartate proton MRS quantification
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James S. Babb, Assaf Tal, Oded Gonen, Pippa Storey, William E. Wu, Ivan I. Kirov, Ke Zhang, Brian J. Soher, and Yvonne W. Lui
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Peak area ,Treatment response ,Nuclear magnetic resonance ,Chemistry ,Likelihood-ratio test ,Molecular Medicine ,Radiology, Nuclear Medicine and imaging ,Proton mrs ,N-acetylaspartate ,Spectroscopy ,Standard deviation ,Spectral simulation ,Imaging phantom - Abstract
Concentration of the neuronal marker, N-acetylaspartate (NAA), a quantitative metric for the health and density of neurons, is currently obtained by integration of the manually defined peak in whole-head proton ((1) H)-MRS. Our goal was to develop a full spectral modeling approach for the automatic estimation of the whole-brain NAA concentration (WBNAA) and to compare the performance of this approach with a manual frequency-range peak integration approach previously employed. MRI and whole-head (1) H-MRS from 18 healthy young adults were examined. Non-localized, whole-head (1) H-MRS obtained at 3 T yielded the NAA peak area through both manually defined frequency-range integration and the new, full spectral simulation. The NAA peak area was converted into an absolute amount with phantom replacement and normalized for brain volume (segmented from T1 -weighted MRI) to yield WBNAA. A paired-sample t test was used to compare the means of the WBNAA paradigms and a likelihood ratio test used to compare their coefficients of variation. While the between-subject WBNAA means were nearly identical (12.8 ± 2.5 mm for integration, 12.8 ± 1.4 mm for spectral modeling), the latter's standard deviation was significantly smaller (by ~50%, p = 0.026). The within-subject variability was 11.7% (±1.3 mm) for integration versus 7.0% (±0.8 mm) for spectral modeling, i.e., a 40% improvement. The (quantifiable) quality of the modeling approach was high, as reflected by Cramer-Rao lower bounds below 0.1% and vanishingly small (experimental - fitted) residuals. Modeling of the whole-head (1) H-MRS increases WBNAA quantification reliability by reducing its variability, its susceptibility to operator bias and baseline roll, and by providing quality-control feedback. Together, these enhance the usefulness of the technique for monitoring the diffuse progression and treatment response of neurological disorders.
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- 2014
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28. Spectroscopic localization by simultaneous acquisition of the double-spin and stimulated echoes
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Assaf Tal and Oded Gonen
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Nuclear magnetic resonance ,Chemistry ,Pulse (signal processing) ,Echo (computing) ,Spin echo ,Coherence (signal processing) ,Radiology, Nuclear Medicine and imaging ,Spectroscopy ,Absorption (electromagnetic radiation) ,Imaging phantom ,Spin-½ - Abstract
Purpose To design a proton MR spectroscopy (1H-MRS) localization sequence that combines the signal-to-noise-ratio (SNR) benefits of point resolved spectroscopy (PRESS) with the high pulse bandwidths, low chemical shift displacements (CSD), low specific absorption rates (SAR), short echo times (TE), and superior radiofrequency transmit field (B1+) immunity of stimulated echo acquisition mode (STEAM), by simultaneously refocusing and acquiring both the double-spin and stimulated echo coherence pathways from the volume of interest. Theory and Methods We propose a family of 1H-MRS sequences comprising three orthogonal spatially selective pulses with flip angles 90°
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- 2014
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29. 172. Receptor Protein Tyrosine Phosphatases in Schizophrenia
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Moses V. Chao, Sheila Harrock, Thorsten M. Kranz, Dolores Malaspina, and Oded Gonen
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medicine.medical_specialty ,Endocrinology ,Chemistry ,Schizophrenia (object-oriented programming) ,Internal medicine ,Phosphatase ,medicine ,Tyrosine ,Receptor ,Biological Psychiatry - Published
- 2018
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30. Global N-acetylaspartate concentration in benign and non-benign multiple sclerosis patients of long disease duration
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Achim Gass, Kerstin Bendfeldt, James S. Babb, Jochen G. Hirsch, Ludwig Kappos, Iris-Katharina Penner, Lutz Achtnichts, Yvonne Naegelin, Oded Gonen, Michael Amann, and D. J. Rigotti
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Adult ,Male ,In vivo magnetic resonance spectroscopy ,Pathology ,medicine.medical_specialty ,Magnetic Resonance Spectroscopy ,Population ,Sensitivity and Specificity ,Severity of Illness Index ,Gastroenterology ,Article ,Diagnosis, Differential ,Lesion ,Internal medicine ,Severity of illness ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Longitudinal Studies ,education ,Brain Chemistry ,Aspartic Acid ,education.field_of_study ,Expanded Disability Status Scale ,medicine.diagnostic_test ,business.industry ,Multiple sclerosis ,Reproducibility of Results ,Magnetic resonance imaging ,General Medicine ,Multiple Sclerosis, Chronic Progressive ,medicine.disease ,Magnetic Resonance Imaging ,Female ,Protons ,Differential diagnosis ,medicine.symptom ,business ,Biomarkers - Abstract
To examine whether clinically benign multiple sclerosis patients (BMS) show similar losses of their global N-acetylaspartate (NAA) neuronal marker relative to more clinically disabled patients of similar disease duration.The whole-brain NAA concentration (WBNAA) was acquired with whole-head non-localizing proton MR spectroscopy. Fractional brain parenchymal volume (fBPV), T2 and T1 lesion loads, were obtained from the MRI in: (i) 24 BMS patients: 23.1 ± 7.2 years disease duration, median Expanded Disability Status Scale (EDSS) score of 2.0 (range: 0-3); (ii) 26 non-benign MS patients (non-BMS), 24.5 ± 7.4 years disease duration, median EDSS of 4.0 (range: 3.5-6.5); (iii) 15 healthy controls.Controls' 12.4 ± 2.3mM WBNAA was significantly higher than the BMS's and non-BMS's 10.5 ± 2.4 and 9.9 ± 2.1mM (both p0.02), but the difference between the patients' groups was not (p0.4). Likewise, the controls' 81.2 ± 4.5% fBPV exceeded the BMS and non-BMS's 77.0 ± 5.8% and 76.3 ± 8.6% (p0.03), which were also not different from one another (p0.7). BMS patients' T1-hypointense lesion load, 2.1 ± 2.2 cm(3), was not significantly different than the non-BMS's 4.1 ± 5.4 cm(3) (p0.08) and T2-hyperintense loads: 6.0 ± 5.7 cm(3) and 8.7 ± 7.8 cm(3), were also not different (p0.1).WBNAA differentiates normal controls from MS patients but does not distinguish BMS from more disabled MS patients of similar disease duration. Nevertheless, all MS patients who remain RR for 15+ years suffered WBNAA loss similar to the average RR MS population at fourfold shorter disease duration suggesting relative global neuronal sparing or leveling-off of the neurodegeneration rate.
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- 2013
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31. Three-dimensional hadamard-encoded proton spectroscopic imaging in the human brain using time-cascaded pulses at 3 tesla
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Assaf Tal, Ouri Cohen, and Oded Gonen
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Point spread function ,Nuclear magnetic resonance ,medicine.anatomical_structure ,Proton ,Hadamard transform ,Chemistry ,medicine ,Radiology, Nuclear Medicine and imaging ,Hadamard encoding ,Human brain ,Shift displacement - Abstract
PURPOSE To reduce the specific-absorption-rate (SAR) and chemical shift displacement (CSD) of three dimensional (3D) Hadamard spectroscopic imaging (HSI) and maintain its point spread function (PSF) benefits.
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- 2013
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32. Structure-specific glial response in a macaque model of neuroAIDS
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James Babb, William E. Wu, Assaf Tal, Zhang K, Ramón Gilberto González, Eva-Maria Ratai, and Oded Gonen
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Male ,medicine.medical_specialty ,Immunology ,Thalamus ,Simian Acquired Immunodeficiency Syndrome ,Caudate nucleus ,Hippocampus ,Creatine ,Choline ,chemistry.chemical_compound ,Central Nervous System Diseases ,Internal medicine ,Centrum semiovale ,medicine ,Animals ,Immunology and Allergy ,Cerebrospinal Fluid ,Brain Chemistry ,Aspartic Acid ,business.industry ,Putamen ,Macaca mulatta ,Magnetic Resonance Imaging ,Infectious Diseases ,Endocrinology ,chemistry ,Gliosis ,Female ,medicine.symptom ,Nuclear medicine ,business ,Inositol - Abstract
OBJECTIVE As ~40% of persons with HIV also suffer neurocognitive decline, we sought to assess metabolic dysfunction in the brains of simian immunodeficiency virus (SIV)-infected rhesus macaques, an advanced animal model, in structures involved in cognitive function. We test the hypothesis that SIV-infection produces proton-magnetic resonance spectroscopic imaging (H-MRSI)-observed decline in the neuronal marker, N-acetylaspartate (NAA), and elevations in the glial marker, myo-inositol (mI), and associated creatine (Cr) and choline (Cho) in these structures. DESIGN Pre- and 4-6 weeks post-SIV infection (with CD8 T-lymphocyte depletion) was monitored with T2-weighted quantitative MRI and 16×16×4 multivoxel H-MRSI (TE/TR = 33/1400 ms) in the brains of five rhesus macaques. METHODS Exploiting the high-resolution H-MRSI grid, we obtained absolute, cerebrospinal fluid partial volume-corrected NAA, Cr, Cho and mI concentrations from centrum semiovale, caudate nucleus, putamen, thalamus and hippocampus regions. RESULTS Pre- to post-infection mean Cr increased in the thalamus: 7.2±0.4 to 8.0±0.8 mmol/l (+11%, P
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- 2013
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33. In vivo 7Tesla imaging of the dentate granule cell layer in schizophrenia
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Graham C. Wiggins, Dolores Malaspina, Melina Warren, Ivan I. Kirov, Julie W. Messinger, Ceylan Z. Cankurtaran, Oded Gonen, Kant M. Matsuda, Raymond R. Goetz, James S. Babb, Nissa N. Perry, Caitlin Hardy, and Ajax E. George
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Adult ,Male ,Pathology ,medicine.medical_specialty ,computer.software_genre ,Statistics, Nonparametric ,Article ,Young Adult ,Voxel ,Image Processing, Computer-Assisted ,medicine ,Humans ,Hippocampus (mythology) ,Biological Psychiatry ,Aged ,medicine.diagnostic_test ,business.industry ,Dentate gyrus ,Magnetic resonance imaging ,Histology ,Middle Aged ,medicine.disease ,Magnetic Resonance Imaging ,Psychiatry and Mental health ,Schizophrenia ,Case-Control Studies ,Dentate Gyrus ,Biomarker (medicine) ,Female ,Histopathology ,Psychology ,Nuclear medicine ,business ,computer - Abstract
article i nfo Purpose: The hippocampus is central to the pathophysiology of schizophrenia. Histology shows abnormalities in the dentate granule cell layer (DGCL), but its small size (~100 μm thickness) has precluded in vivo human studies. We used ultra high field magnetic resonance imaging (MRI) to compare DGCL morphology of schizo- phrenic patients to matched controls. Method: Bilateral hippocampi of 16 schizophrenia patients (10 male) 40.7 ± 10.6 years old (mean ± standard de- viation) were imaged at 7 Tesla MRI with heavily T2 ⁎-weighted gradient-echo sequence at 232 μm in-plane resolu- tion (0.08 μL image voxels). Fifteen matched controls (8 male, 35.6 ± 9.4 years old) and one ex vivo post mortem hippocampus (that also underwent histopathology) were scanned with same protocol. Three blinded neuroradiol- ogists rated each DGCL on a qualitative scale of 1 to 6 (from "not discernible" to "easily visible, appearing dark gray or black") and mean left and right DGCL scores were compared using a non-parametric Mann-Whitney test. Results: MRI identification of the DGCL was validated with histopathology. Mean right and left DGCL ratings in pa- tients (3.2 ± 1.0 and 3.5 ± 1.2) were not statistically different from those of controls (3.9 ± 1.1 and 3.8 ± 0.8), but patients had a trend fo rl ower right DGCL score (p = 0.07), which was significantly associated with patient diagnosis (p = 0.05). The optimal 48% sensitivity and 80% specificity for schizophrenia were achieved with a DGCL rating of ≤2. Conclusion: Decreased contrast in the right DGCL in schizophreniawas predictive of schizophrenia diagnosis. Better utility of this metric as a schizophrenia biomarker may be achieved in future studies of patients with homogeneous disease subtypes and progression rates.
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- 2013
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34. Global gray and white matter metabolic changes after simian immunodeficiency virus infection in CD8-depleted rhesus macaques: proton MRS imaging at 3 T
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Henry Rusinek, Oded Gonen, R. Gilberto Gonzalez, Ivan I. Kirov, Assaf Tal, Daniel Charytonowicz, William E. Wu, Eva-Maria Ratai, and James S. Babb
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medicine.medical_specialty ,Biology ,Creatine ,biology.organism_classification ,White matter ,chemistry.chemical_compound ,Rhesus macaque ,Immune system ,Cerebrospinal fluid ,medicine.anatomical_structure ,Endocrinology ,chemistry ,Internal medicine ,Immunology ,Brain size ,medicine ,Molecular Medicine ,Choline ,Radiology, Nuclear Medicine and imaging ,Spectroscopy ,CD8 - Abstract
To test the hypotheses that global decreased neuro-axonal integrity reflected by decreased N-acetylaspartate (NAA) and increased glial activation reflected by an elevation in its marker, the myo-inositol (mI), present in a CD8-depleted rhesus macaque model of HIV-associated neurocognitive disorders. To this end, we performed quantitative MRI and 16 × 16 × 4 multivoxel proton MRS imaging (TE/TR = 33/1400 ms) in five macaques pre- and 4–6 weeks post-simian immunodeficiency virus infection. Absolute NAA, creatine, choline (Cho), and mI concentrations, gray and white matter (GM and WM) and cerebrospinal fluid fractions were obtained. Global GM and WM concentrations were estimated from 224 voxels (at 0.125 cm3 spatial resolution over ~35% of the brain) using linear regression. Pre- to post-infection global WM NAA declined 8%: 6.6 ± 0.4 to 6.0 ± 0.5 mM (p = 0.05); GM Cho declined 20%: 1.3 ± 0.2 to 1.0 ± 0.1 mM (p
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- 2013
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35. Quantifying Global-Brain Metabolite Level Changes with Whole-Head Proton MR Spectroscopy at 3 T
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Jeffrey Huang, James S. Babb, William E. Wu, Oded Gonen, Ivan I. Kirov, Matthew S. Davitz, Girish M. Fatterpekar, and Brian J. Soher
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In vivo magnetic resonance spectroscopy ,Adult ,Male ,Adolescent ,Coefficient of variation ,Metabolite ,Glutamine ,Proton Magnetic Resonance Spectroscopy ,Biomedical Engineering ,Biophysics ,Glutamic Acid ,Sensitivity and Specificity ,Article ,030218 nuclear medicine & medical imaging ,Choline ,03 medical and health sciences ,chemistry.chemical_compound ,Young Adult ,0302 clinical medicine ,Reference Values ,Medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Prospective Studies ,Prospective cohort study ,Aspartic Acid ,business.industry ,Brain ,Reproducibility of Results ,Repeatability ,Creatine ,Proton mr spectroscopy ,chemistry ,Female ,business ,Nuclear medicine ,030217 neurology & neurosurgery - Abstract
Background and purpose To assess the sensitivity of non-localized, whole-head 1H-MRS to an individual's serial changes in total-brain NAA, Glx, Cr and Cho concentrations — metabolite metrics often used as surrogate markers in neurological pathologies. Materials and methods In this prospective study, four back-to-back (single imaging session) and three serial (successive sessions) non-localizing, ~3 min 1H-MRS (TE/TR/TI = 5/104/940 ms) scans were performed on 18 healthy young volunteers: 9 women, 9 men: 29.9 ± 7.6 [mean ± standard deviation (SD)] years old. These were analyzed by calculating a within-subject coefficient of variation (CV = SD/mean) to assess intra- and inter-scan repeatability and prediction intervals. This study was Health Insurance Portability and Accountability Act compliant. All subjects gave institutional review board-approved written, informed consent. Results The intra-scan CVs for the NAA, Glx, Cr and Cho were: 3.9 ± 1.8%, 7.3 ± 4.6%, 4.0 ± 3.4% and 2.5 ± 1.6%, and the corresponding inter-scan (longitudinal) values were: 7.0 ± 3.1%, 10.6 ± 5.6%, 7.6 ± 3.5% and 7.0 ± 3.9%. This method is shown to have 80% power to detect changes of 14%, 27%, 26% and 19% between two serial measurements in a given individual. Conclusions Subject to the assumption that in neurological disorders NAA, Glx, Cr and Cho changes represent brain-only pathology and not muscles, bone marrow, adipose tissue or epithelial cells, this approach enables us to quantify them, thereby adding specificity to the assessment of the total disease load. This will facilitate monitoring diffuse pathologies with faster measurement, more extensive (~90% of the brain) spatial coverage and sensitivity than localized 1H-MRS.
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- 2016
36. Metabolic Abnormalities in the Hippocampus of Patients with Schizophrenia: A 3D Multivoxel MR Spectroscopic Imaging Study at 3 T
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James Babb, Dolores Malaspina, E.J. Meyer, Ivan I. Kirov, Matthew S. Davitz, Oded Gonen, Assaf Tal, and Mariana Lazar
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Adult ,Male ,medicine.medical_specialty ,Pathology ,Proton Magnetic Resonance Spectroscopy ,Neuroimaging ,Hippocampal formation ,Gastroenterology ,Hippocampus ,Article ,030218 nuclear medicine & medical imaging ,Choline ,03 medical and health sciences ,0302 clinical medicine ,Imaging, Three-Dimensional ,Internal medicine ,Medicine ,Hippocampus (mythology) ,Humans ,Radiology, Nuclear Medicine and imaging ,In patient ,Aspartic Acid ,business.industry ,Middle Aged ,medicine.disease ,Creatine ,Schizophrenia ,Mr spectroscopic imaging ,Hippocampal volume ,Hypermetabolism ,Histopathology ,Female ,Neurology (clinical) ,business ,030217 neurology & neurosurgery - Abstract
BACKGROUND AND PURPOSE: Schizophrenia is well-known to be associated with hippocampal structural abnormalities. We used 1H-MR spectroscopy to test the hypothesis that these abnormalities are accompanied by NAA deficits, reflecting neuronal dysfunction, in patients compared with healthy controls. MATERIALS AND METHODS: Nineteen patients with schizophrenia (11 men; mean age, 40.6 ± 10.1 years; mean disease duration, 19.5 ± 10.5 years) and 11 matched healthy controls (5 men; mean age, 33.7 ± 10.1 years) underwent MR imaging and multivoxel point-resolved spectroscopy (TE/TR, 35/1400 ms) 1H-MRS at 3T to obtain their hippocampal GM absolute NAA, Cr, Cho, and mIns concentrations. Unequal variance t tests and ANCOVA were used to compare patients with controls. Bilateral volumes from manually outlined hippocampal masks were compared by using unequal variance t tests. RESULTS: Patients' average hippocampal GM Cr concentrations were 19% higher than that of controls, 8.7 ± 2.2 versus 7.4 ± 1.2 mmol/L ( P .1). There was a positive correlation between mIns and Cr in patients ( r = 0.57, P = .05) but not in controls. The mean bilateral hippocampal volume was ∼10% lower in patients: 7.5 ± 0.9 versus 8.4 ± 0.7 cm3 ( P < .05). CONCLUSIONS: These findings suggest that the hippocampal volume deficit in schizophrenia is not due to net loss of neurons, in agreement with histopathology studies but not with prior 1H-MR spectroscopy reports. Elevated Cr is consistent with hippocampal hypermetabolism, and its correlation with mIns may also suggest an inflammatory process affecting some cases; these findings may suggest treatment targets and markers to monitor them. CSI : chemical shift imaging 1H-MRSI : 3D multivoxel 1H-MRS imaging SZ : schizophrenia
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- 2016
37. Serial proton MR spectroscopy of gray and white matter in relapsing-remitting MS
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Ivan I. Kirov, James S. Babb, Joseph Herbert, Assaf Tal, and Oded Gonen
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Adult ,Male ,Pathology ,medicine.medical_specialty ,Magnetic Resonance Spectroscopy ,Volume of interest ,Creatine ,Nerve Fibers, Myelinated ,Choline ,White matter ,Disability Evaluation ,chemistry.chemical_compound ,Multiple Sclerosis, Relapsing-Remitting ,medicine ,Humans ,Aspartic Acid ,Nerve Fibers, Unmyelinated ,Expanded Disability Status Scale ,business.industry ,Functional Neuroimaging ,Multiple sclerosis ,Brain ,medicine.disease ,Proton mr spectroscopy ,medicine.anatomical_structure ,chemistry ,Relapsing remitting ,Case-Control Studies ,Female ,Neurology (clinical) ,Protons ,Nuclear medicine ,business ,Inositol ,Follow-Up Studies - Abstract
To characterize and follow the diffuse gray and white matter (GM/WM) metabolic abnormalities in early relapsing-remitting multiple sclerosis using proton magnetic resonance spectroscopic imaging ((1)H-MRSI).Eighteen recently diagnosed, mildly disabled patients (mean baseline time from diagnosis 32 months, mean Expanded Disability Status Scale [EDSS] score 1.3), all on immunomodulatory medication, were scanned semiannually for 3 years with T1-weighted and T2-weighted MRI and 3D (1)H-MRSI at 3 T. Ten sex- and age-matched controls were followed annually. Global absolute concentrations of N-acetylaspartate (NAA), choline (Cho), creatine (Cr), and myo-inositol (mI) were obtained for all GM and WM in the 360 cm(3) (1)H-MRSI volume of interest.Patients' average WM Cr, Cho, and mI concentrations (over all time points), 5.3 ± 0.4, 1.6 ± 0.1, and 5.1 ± 0.7 mM, were 8%, 12%, and 11% higher than controls' (p ≤ 0.01), while their WM NAA, 7.4 ± 0.7 mM, was 6% lower (p = 0.07). There were increases with time of patients' WM Cr: 0.1 mM/year, Cho: 0.02 mM/year, and NAA: 0.1 mM/year (all p0.05). None of the patients' metabolic concentrations correlated with their EDSS score, relapse rate, GM/WM/CSF fractions, or lesion volume.Diffuse WM glial abnormalities were larger in magnitude than the axonal abnormalities and increased over time independently of conventional clinical or imaging metrics and despite immunomodulatory treatment. In contrast, the axonal abnormalities showed partial recovery, suggesting that patients' lower WM NAA levels represented a dysfunction, which may abate with treatment. Absence of detectable diffuse changes in GM suggests that injury there is minimal, focal, or heterogeneous between cortex and deep GM nuclei.
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- 2012
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38. Localization errors in MR spectroscopic imaging due to the drift of the main magnetic field and their correction
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Assaf Tal and Oded Gonen
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Physics ,Field (physics) ,Phase (waves) ,computer.software_genre ,Tracking (particle physics) ,Instantaneous phase ,Imaging phantom ,Computational physics ,Magnetic field ,Nuclear magnetic resonance ,Bias of an estimator ,Voxel ,Radiology, Nuclear Medicine and imaging ,computer - Abstract
Purpose: To analyze the effect of B0 field drift on multivoxel MR spectroscopic imaging and to propose an approach for its correction. Theory and Methods: It is shown, both theoretically and in a phantom, that for ∼30 min acquisitions a linear B0 drift (∼0.1 ppm/h) will cause localization errors that can reach several voxels (centimeters) in the slower varying phase encoding directions. An efficient and unbiased estimator is proposed for tracking the drift by interleaving short (∼ ), nonlocalized acquisitions on the nonsuppressed water each pulse repetition time, as shown in 10 volunteers at 1.5 and 3 T. Results: The drift is shown to be predominantly linear in both the phantom and volunteers at both fields. The localization errors are observed and quantified in both phantom and volunteers. The unbiased estimator is shown to reliably track the instantaneous frequency in vivo despite only using a small portion of the FID. Conclusion: Contrary to single-voxel MR spectroscopy, where it leads to line broadening, field drift can lead to localization errors in the longer chemical shift imaging experiments. Fortunately, this drift can be obtained at a negligible cost to sequence timing, and corrected for in post processing. Magn Reson Med, 70:895–904, 2013. © 2012 Wiley Periodicals, Inc.
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- 2012
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39. The role of gray and white matter segmentation in quantitative proton MR spectroscopic imaging
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Ivan I. Kirov, Assaf Tal, Robert I. Grossman, and Oded Gonen
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In vivo magnetic resonance spectroscopy ,medicine.diagnostic_test ,business.industry ,Partial volume ,Magnetic resonance imaging ,computer.software_genre ,White matter ,medicine.anatomical_structure ,Reduced susceptibility ,Nuclear magnetic resonance ,Voxel ,medicine ,Mr spectroscopic imaging ,Molecular Medicine ,Radiology, Nuclear Medicine and imaging ,Segmentation ,Nuclear medicine ,business ,computer ,Spectroscopy ,Mathematics - Abstract
Since the brain's gray matter (GM) and white matter (WM) metabolite concentrations differ, their partial volumes can vary the voxel's ¹H MR spectroscopy (¹H-MRS) signal, reducing sensitivity to changes. While single-voxel ¹H-MRS cannot differentiate between WM and GM signals, partial volume correction is feasible by MR spectroscopic imaging (MRSI) using segmentation of the MRI acquired for VOI placement. To determine the magnitude of this effect on metabolic quantification, we segmented a 1-mm³ resolution MRI into GM, WM and CSF masks that were co-registered with the MRSI grid to yield their partial volumes in approximately every 1 cm³ spectroscopic voxel. Each voxel then provided one equation with two unknowns: its i- metabolite's GM and WM concentrations C(i) (GM) , C(i) (WM) . With the voxels' GM and WM volumes as independent coefficients, the over-determined system of equations was solved for the global averaged C(i) (GM) and C(i) (WM) . Trading off local concentration differences offers three advantages: (i) higher sensitivity due to combined data from many voxels; (ii) improved specificity to WM versus GM changes; and (iii) reduced susceptibility to partial volume effects. These improvements made no additional demands on the protocol, measurement time or hardware. Applying this approach to 18 volunteered 3D MRSI sets of 480 voxels each yielded N-acetylaspartate, creatine, choline and myo-inositol C(i) (GM) concentrations of 8.5 ± 0.7, 6.9 ± 0.6, 1.2 ± 0.2, 5.3 ± 0.6 mM, respectively, and C(i) (WM) concentrations of 7.7 ± 0.6, 4.9 ± 0.5, 1.4 ± 0.1 and 4.4 ± 0.6mM, respectively. We showed that unaccounted voxel WM or GM partial volume can vary absolute quantification by 5-10% (more for ratios), which can often double the sample size required to establish statistical significance.
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- 2012
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40. In vivo free induction decay based 3D multivoxel longitudinal hadamard spectroscopic imaging in the human brain at 3 T
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Gadi Goelman, Oded Gonen, and Assaf Tal
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Point spread function ,Spins ,business.industry ,Chemistry ,computer.software_genre ,Imaging phantom ,Free induction decay ,symbols.namesake ,Optics ,Nuclear magnetic resonance ,Fourier transform ,Voxel ,Hadamard transform ,symbols ,Radiology, Nuclear Medicine and imaging ,business ,Adiabatic process ,computer - Abstract
We propose and demonstrate a full 3D longitudinal Hadamard Spectroscopic Imaging (L-HSI) scheme for obtaining chemical shift maps, by employing adiabatic inversion pulses to encode the spins’ positions. The approach offers several advantages over conventional Fourier-based encoding methods, including a localized point spread function; no aliasing, allowing for VOIs smaller than the object being imaged; an option for acquiring non-contiguous voxels; and inherent outer volume rejection. The latter allows for doing away with conventional outer volume suppression schemes, such as PRESS or STEAM, and acquiring non spin-echo spectra with short acquisition delay times, limited only by the excitation pulse’s duration. This, in turn, minimizes T2 decay, maximizes the signal to noise ratio, and reduces J-coupling induced signal decay. Results are presented for both a phantom and an in-vivo healthy volunteer at 3T.
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- 2012
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41. Two-year serial whole-brain N-acetyl-L-aspartate in patients with relapsing-remitting multiple sclerosis
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E. Gorynski, Oded Gonen, James Babb, Matilde Inglese, Joe Herbert, Nissa N. Perry, D. J. Rigotti, Robert I. Grossman, and Ivan I. Kirov
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Adult ,Male ,medicine.medical_specialty ,Multiple Sclerosis ,Magnetic Resonance Spectroscopy ,Aspartic Acid ,Biological Markers ,Brain ,Cohort Studies ,Disability Evaluation ,Female ,Humans ,Least-Squares Analysis ,Longitudinal Studies ,Multiple Sclerosis, Relapsing-Remitting ,Neurons ,Organ Size ,Predictive Value of Tests ,Prognosis ,Statistics as Topic ,Neurology (clinical) ,Arts and Humanities (miscellaneous) ,N-acetyl-L-aspartate ,Phases of clinical research ,Relapsing-Remitting ,Medicine ,In patient ,Expanded Disability Status Scale ,business.industry ,Multiple sclerosis ,Articles ,medicine.disease ,Surgery ,Relapsing remitting ,Predictive value of tests ,business ,Nuclear medicine ,Biomarkers ,Cohort study - Abstract
To test the hypotheses that 1) patients with relapsing-remitting multiple sclerosis (RR-MS) exhibit a quantifiable decline in their whole-brain concentration of the neural marker N-acetyl-L-aspartate (WBNAA), that is 2) more sensitive than clinical changes and 3) may provide a practical outcome measure for proof-of-concept and larger phase III clinical trials.Nineteen patients (5 men and 14 women) with clinically definite RR-MS, who were 33 ± 5 years old (mean ± SD), had a disease duration of 47 ± 28 months, and had a median Expanded Disability Status Scale (EDSS) score of 1.0 (range 0-5.5), underwent MRI and proton magnetic resonance spectroscopy ((1)H-MRS) semiannually for 2 years (5 time points). Eight matched control subjects underwent the protocol annually (3 time points). Their global N-acetyl-L-aspartate (1)H-MRS signal was converted into absolute amounts by phantom replacement and into WBNAA by dividing with the brain parenchymal volume, V(B), from MRI segmentation.The baseline WBNAA of the patients (10.5 ± 1.7 mM) was significantly lower than that of the controls (12.3 ± 1.3 mM; p0.002) and declined significantly (5%/year, p0.002) vs that for the controls who did not show a decline (0.4%/year, p0.7). Likewise, V(B) values of the patients also declined significantly (0.5%/year, p0.0001), whereas those of the controls did not (0.2%/year, p = 0.08). The mean EDSS score of the patients increased insignificantly from 1.0 to 1.5 (range 0-6.0) and did not correlate with V(B) or WBNAA.WBNAA of patients with RR-MS declined significantly at both the group and individual levels over a 2-year time period common in clinical trials. Because of the small sample sizes required to establish power, WBNAA can be incorporated into future studies.
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- 2012
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42. Re-evaluation of post-wash sperm is a helpful tool in the decision to perform in vitro fertilisation or intracytoplasmic sperm injection
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A. Berkovits, Yehudith Ghetler, E. Piura, A. Itskovich, Amir Wiser, T. Rom, Oded Gonen, and Adrian Shulman
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Gynecology ,medicine.medical_specialty ,In vitro fertilisation ,urogenital system ,business.industry ,Urology ,medicine.medical_treatment ,Motile sperm ,General Medicine ,Insemination ,Sperm ,Intracytoplasmic sperm injection ,Andrology ,Endocrinology ,embryonic structures ,Medicine ,business ,reproductive and urinary physiology ,Fertilisation - Abstract
The aim of this study was to find discriminatory parameters, based on sperm characteristics on the day of ovum pickup, that can help guide the decision to perform either intracytoplasmic sperm injection (ICSI) or in vitro fertilisation (IVF). We evaluated 112 cycles fertilised with both regular and ICSI insemination during the same cycle. A total of 112 cycles were analysed. In 62 cycles, fertilisation was obtained with both ICSI and IVF, and in 50 cycles, fertilisation was obtained by ICSI alone. The sperm samples were re-evaluated after the preparation process. The mean initial total motile sperm count (TMSC) was 66.3 × 10(6) ± 47.5 in the group that underwent both methods and 23.1 × 10(6) ± 20.4 in the ICSI only group (P < 0.05). After sperm preparation, the mean post-wash TMSC was 4.4 × 10(6) ± 3.4 and 1.06 × 10(6) ± 0.9 respectively (P < 0.05). A cutoff of 1.5 × 10(6) or fewer sperm after preparation as an indicator for ICSI has a sensitivity of 80% and a specificity of 77%. Re-evaluation of TMSC can prevent unexpected fertilisation failure. Fewer than 1.5 million TMSC after wash should be considered an indication for ICSI fertilisation.
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- 2011
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43. Longitudinal inter- and intra-individual human brain metabolic quantification over 3 years with proton MR spectroscopy at 3 T
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James S. Babb, Nikhil Jayawickrama, Nissa N. Perry, Ivan I. Kirov, Ilena C. George, and Oded Gonen
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In vivo magnetic resonance spectroscopy ,Aging ,Magnetic Resonance Spectroscopy ,Creatine ,computer.software_genre ,Sensitivity and Specificity ,Article ,Choline ,chemistry.chemical_compound ,Nuclear magnetic resonance ,Voxel ,medicine ,Humans ,Tissue Distribution ,Radiology, Nuclear Medicine and imaging ,Longitudinal Studies ,Aspartic Acid ,Inositol Metabolism ,Brain ,Reproducibility of Results ,Repeatability ,Human brain ,Intra individual ,Proton mr spectroscopy ,medicine.anatomical_structure ,chemistry ,computer ,Algorithms ,Inositol - Abstract
The longitudinal repeatability of proton MR spectroscopy ((1) H-MRS) in the healthy human brain at high fields over long periods is not established. Therefore, we assessed the inter- and intra-subject repeatability of (1) H-MRS in an approach suited for diffuse pathologies in 10 individuals, at 3T, annually for 3 years. Spectra from 480 voxels over 360 cm(3) (∼30%) of the brain, were individually phased, frequency-aligned, and summed into one average spectrum. This dramatically increases metabolites' signal-to-noise-ratios while maintaining narrow linewidths that improve quantification precision. The resulting concentrations of the N-acetylaspartate, creatine, choline, and myo-inositol are: 8.9 ± 0.8, 5.9 ± 0.6, 1.4 ± 0.1, and 4.5 ± 0.5 mM (mean ± standard-deviation). the inter-subject coefficients of variation are 8.7%, 10.2%, 10.7%, and 11.8%; and the longitudinal (intra-subject) coefficients of variation are lower still: 6.6%, 6.8%, 6.8%, and 10%, much better than the 35%, 44%, 55%, and 62% intra-voxel coefficients of variation. The biological and nonbiological components of the summed spectra coefficients of variation had similar contributions to the overall variance.
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- 2011
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44. Cross-sectional and longitudinal reproducibility of rhesus macaque brain metabolites: A proton MR spectroscopy study at 3 T
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William E. Wu, James S. Babb, Chan-Gyu Joo, Ivan I. Kirov, Oded Gonen, Ke Zhang, R. Gilberto Gonzalez, and Eva-Maria Ratai
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In vivo magnetic resonance spectroscopy ,Reproducibility ,Biology ,computer.software_genre ,biology.organism_classification ,Creatine ,Macaque ,Brain mapping ,chemistry.chemical_compound ,Rhesus macaque ,Nuclear magnetic resonance ,chemistry ,Voxel ,biology.animal ,Choline ,Radiology, Nuclear Medicine and imaging ,computer - Abstract
Non-human primates are often used as preclinical model systems for (mostly diffuse or multi-focal) neurological disorders and their experimental treatment. Due to cost considerations, such studies frequently utilize non-destructive imaging modalities, MRI and proton MR spectroscopy ((1) H MRS). Cost may explain why the inter- and intra-animal reproducibility of the (1) H MRS observed brain metabolites, are not reported. To this end, we performed test-retest three-dimensional brain (1) H MRS in five healthy rhesus macaques at 3 T. Spectra were acquired from 224 isotropic (0.5 cm)(3) = 125 μL voxels, over 28 cm(3) (∼ 35%) of the brain, then individually phased, frequency aligned and summed into a spectrum representative of the entire volume of interest. This dramatically increases the metabolites' signal-to-noise ratios, while maintaining the (narrow) voxel linewidth. The results show that the average N-acetylaspartate, creatine, choline, and myo-inositol concentrations in the macaque brain are: 7.7 ± 0.5, 7.0 ± 0.5, 1.2 ± 0.1 and 4.0 ± 0.6 mM/g wet weight (mean ± standard deviation). Their inter-animal coefficients of variation (CV) are 4%, 4%, 6%, and 15%; and the longitudinal (intra-animal) CVs are lower still: 4%, 5%, 5%, and 4%, much better than the 22%, 33%, 36%, and 45% intra-voxel CVs, demonstrating the advantage of the approach and its utility for preclinical studies of diffuse neurological diseases in rhesus macaques.
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- 2011
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45. Erratum to 'Whole brain neuronal abnormalities in focal epilepsy quantified with proton MR spectroscopy' [Epilepsy Res. 139 (2018) 85–91]
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Heath R. Pardoe, Hoby P. Hetherington, Brian J. Soher, Ivan I. Kirov, James S. Babb, Jullie W. Pan, Oded Gonen, Matthew S. Davitz, and Ruben Kuzniecky
- Subjects
Epilepsy ,Text mining ,Nuclear magnetic resonance ,Neurology ,business.industry ,Medicine ,Neurology (clinical) ,business ,medicine.disease ,Proton mr spectroscopy - Published
- 2018
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46. Brain metabolitesB1-corrected protonT1mapping in the rhesus macaque at 3 T
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Oded Gonen, Chan Gyu Joo, Songtao Liu, R. Gilberto González, Roman Fleysher, Lazar Fleysher, and Eva-Maria Ratai
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In vivo magnetic resonance spectroscopy ,Magnetic Resonance Spectroscopy ,computer.software_genre ,Creatine ,Brain mapping ,Article ,Choline ,White matter ,chemistry.chemical_compound ,Imaging, Three-Dimensional ,Nuclear magnetic resonance ,Voxel ,Image Processing, Computer-Assisted ,medicine ,Animals ,Radiology, Nuclear Medicine and imaging ,Analysis of Variance ,Aspartic Acid ,Brain Mapping ,business.industry ,Brain ,Reproducibility of Results ,Signal Processing, Computer-Assisted ,Human brain ,Macaca mulatta ,Magnetic Resonance Imaging ,Full width at half maximum ,medicine.anatomical_structure ,chemistry ,Protons ,Nuclear medicine ,business ,computer - Abstract
The accuracy of metabolic quantification in MR spectroscopy is limited by the unknown radiofrequency field and T(1). To address both issues in proton ((1)H) MR spectroscopy, we obtained radiofrequency field-corrected T(1) maps of N-acetylaspartate, choline, and creatine in five healthy rhesus macaques at 3 T. For efficient use of the 4 hour experiment, we used a new three-point protocol that optimizes the precision of T(1) in three-dimensional (1)H-MR spectroscopy localization for extensive, approximately 30%, brain coverage at 0.6 x 0.6 x 0.5 cm(3) = 180-microL spatial resolution. The resulting mean T(1)s in 700 voxels were N-acetylaspartate = 1232 +/- 44, creatine = 1238 +/- 23 and choline = 1107 +/- 56 ms (mean +/- standard error of the mean). Their histograms from all 140 voxels in each animal were similar in position and shape, characterized by standard errors of the mean of the full width at half maximum divided by their means of better than 8%. Regional gray matter N-acetylaspartate, choline, and creatine T(1)s (1333 +/- 43, 1265 +/- 52, and 1131 +/- 28 ms) were 5-10% longer than white matter: 1188 +/- 34, 1201 +/- 24, and 1082 +/- 50 ms (statistically significant for the N-acetylaspartate only), all within 10% of the corresponding published values in the human brain.
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- 2010
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47. Brain Metabolite Proton T2 Mapping at 3.0 T in Relapsing-Remitting Multiple Sclerosis
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Joseph Herbert, Lazar Fleysher, Songtao Liu, Oded Gonen, James S. Babb, Ivan I. Kirov, and Roman Fleysher
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Pathology ,medicine.medical_specialty ,business.industry ,Multiple sclerosis ,Metabolite ,T2 mapping ,medicine.disease ,Cerebro ,Mr imaging ,Central nervous system disease ,chemistry.chemical_compound ,Brain region ,chemistry ,Relapsing remitting ,medicine ,Radiology, Nuclear Medicine and imaging ,business - Abstract
For 3.0-T T2-weighted MR imaging in relapsing-remitting multiple sclerosis, one T2 signal per metabolite suffices in any brain region, irrespective of disease duration, thus validating the hypothesis that the spectroscopic signal intensity changes predominantly represent metabolite levels and not T2 weighting.
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- 2010
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48. Metabolite proton T 2 mapping in the healthy rhesus macaque brain at 3 T
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Lazar Fleysher, Brian J. Soher, Eva-Maria Ratai, Songtao Liu, James S. Babb, Roman Fleysher, Oded Gonen, R. Gilberto Gonzalez, and Chan Gyu Joo
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biology ,medicine.diagnostic_test ,Metabolite ,Magnetic resonance imaging ,Human brain ,Creatine ,biology.organism_classification ,Macaque ,White matter ,chemistry.chemical_compound ,Rhesus macaque ,medicine.anatomical_structure ,Nuclear magnetic resonance ,chemistry ,biology.animal ,medicine ,Choline ,Radiology, Nuclear Medicine and imaging - Abstract
The structure and metabolism of the rhesus macaque brain, an advanced model for neurologic diseases and their treatment response, is often studied noninvasively with MRI and (1)H-MR spectroscopy. Due to the shorter transverse relaxation time (T(2)) at the higher magnetic fields these studies favor, the echo times used in (1)H-MR spectroscopy subject the metabolites to unknown T(2) weighting, decreasing the accuracy of quantification which is key for inter- and intra-animal comparisons. To establish the "baseline" (healthy animal) T(2) values, we mapped them for the three main metabolites' T(2)s at 3 T in four healthy rhesus macaques and tested the hypotheses that their mean values are similar (i) among animals; and (ii) to analogs regions in the human brain. This was done with three-dimensional multivoxel (1)H-MR spectroscopy at (0.6 x 0.6 x 0.5 cm)(3) = 180 microL spatial resolution over a 4.2 x 3.0 x 2.0 = 25 cm(3) ( approximately 30%) of the macaque brain in a two-point protocol that optimizes T(2) precision per unit time. The estimated T(2)s in several gray and white matter regions are all within 10% of those reported in the human brain (mean +/- standard error of the mean): N-acetylaspartate = 316 +/- 7, creatine = 177 +/- 3, and choline = 264 +/- 9 ms, with no statistically significant gray versus white matter differences.
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- 2009
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49. MR spectroscopy indicates diffuse multiple sclerosis activity during remission
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Joseph Herbert, Ivan I. Kirov, Vishal Patil, James S. Babb, Oded Gonen, and Henry Rusinek
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Adult ,Male ,In vivo magnetic resonance spectroscopy ,Pathology ,medicine.medical_specialty ,Magnetic Resonance Spectroscopy ,Multiple Sclerosis ,Creatine ,Article ,Choline ,Central nervous system disease ,Young Adult ,chemistry.chemical_compound ,Atrophy ,medicine ,Humans ,Remyelination ,Brain Chemistry ,Aspartic Acid ,Expanded Disability Status Scale ,business.industry ,Multiple sclerosis ,Remission Induction ,medicine.disease ,Psychiatry and Mental health ,medicine.anatomical_structure ,chemistry ,Female ,Surgery ,Neurology (clinical) ,business ,Nuclear medicine ,Neuroglia ,Inositol - Abstract
Objective: To test the hypothesis that diffuse abnormalities precede axonal damage and atrophy in the MRI normal-appearing tissue of relapsing-remitting (RR) multiple sclerosis (MS) patients, and that these processes continue during clinical remission. Methods: Twenty-one recently diagnosed mildly disabled (mean disease duration 2.3 years, mean Expanded Disability Status Scale score of 1.4) RR MS patients and 15 healthy matched controls were scanned with MRI and proton MR spectroscopic imaging ( 1 H-MRSI) at 3 T. Metabolite concentrations: N -acetylaspartate (NAA) for neuronal integrity; choline (Cho) for membrane turnover rate; creatine (Cr) and myo-inositol (mI) for glial status were obtained in a 360 cm 3 volume of interest (VOI) with 3D multivoxel 1 H-MRSI. They were converted into absolute amounts using phantom replacement and normalised into absolute concentrations by dividing by the VOI tissue volume fraction obtained from MRI segmentation. Results: The patients’ mean VOI tissue volume fraction, 0.92 and NAA concentration, 9.6 mM, were not different from controls’ 0.94 and 9.6 mM. In contrast, the patients’ mean Cr, Cho and mI levels 7.7, 1.9 and 4.1 mM were 9%, 14% and 20%, higher than the controls’ 7.1, 1.6 and 3.4 mM (p = 0.0097, 0.003 and 0.0023). Conclusions: The absence of early tissue atrophy and apparent axonal dysfunction (NAA loss) in these RR MS patients suggests that both are preceded by diffuse glial proliferation (astrogliosis), as well as possible inflammation, demyelination and remyelination reflected by elevated mI, Cho and Cr, even during clinical remission and despite immunomodulatory treatment.
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- 2009
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50. Age dependence of regional proton metabolitesT2relaxation times in the human brain at 3 T
- Author
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Lazar Fleysher, Ivan I. Kirov, Roman Fleysher, Songtao Liu, Vishal Patil, and Oded Gonen
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Adult ,Male ,In vivo magnetic resonance spectroscopy ,Aging ,Magnetic Resonance Spectroscopy ,Metabolite ,Creatine ,Article ,Choline ,White matter ,chemistry.chemical_compound ,medicine ,Humans ,Tissue Distribution ,Radiology, Nuclear Medicine and imaging ,Aged ,Aspartic Acid ,business.industry ,Healthy subjects ,Brain ,Human brain ,Middle Aged ,medicine.anatomical_structure ,chemistry ,T2 relaxation ,Female ,Protons ,Nuclear medicine ,business - Abstract
Although recent studies indicate that use of a single global transverse relaxation time, T(2), per metabolite is sufficient for better than +/-10% quantification precision at intermediate and short echo-time spectroscopy in young adults, the age-dependence of this finding is unknown. Consequently, the age effect on regional brain choline (Cho), creatine (Cr), and N-acetylaspartate (NAA) T(2)s was examined in four age groups using 3D (four slices, 80 voxels 1 cm(3) each) proton MR spectroscopy in an optimized two-point protocol. Metabolite T(2)s were estimated in each voxel and in 10 gray and white matter (GM, WM) structures in 20 healthy subjects: four adolescents (13 +/- 1 years old), eight young adults (26 +/- 1); two middle-aged (51 +/- 6), and six elderly (74 +/- 3). The results reveal that T(2)s in GM (average +/- standard error of the mean) of adolescents (NAA: 301 +/- 30, Cr: 162 +/- 7, Cho: 263 +/- 7 ms), young adults (NAA: 269 +/- 7, Cr: 156 +/- 7, Cho: 226 +/- 9 ms), and elderly (NAA: 259 +/- 13, Cr: 154 +/- 8, Cho: 229 +/- 14 ms), were 30%, 16%, and 10% shorter than in WM, yielding mean global T(2)s of NAA: 343, Cr: 172, and Cho: 248 ms. The elderly NAA, Cr, and Cho T(2)s were 12%, 6%, and 10% shorter than the adolescents, a change of under 1 ms/year assuming a linear decline with age. Formulae for T(2) age-correction for higher quantification precision are provided.
- Published
- 2008
- Full Text
- View/download PDF
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