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In nature, germination of orchid seeds and early plant development rely on a symbiotic association with orchid mycorrhizal (ORM) fungi. These fungi provide the host with the necessary nutrients and facilitate the transition from embryos to protocorms. Despite recent advances in omics technologies, our understanding of this symbiosis remains limited, particularly during the initial stages of the interaction. To address this gap, we employed transcriptomics and metabolomics to investigate the early responses occurring in the mycorrhizal fungus Tulasnella sp. isolate SV6 when co-cultivated with orchid seeds of Serapias vomeracea. The integration of data from gene expression and metabolite profiling revealed the activation of some fungal signalling pathways before the establishment of the symbiosis. Prior to seed contact, an indole-related metabolite was produced by the fungus, and significant changes in the fungal lipid profile occurred throughout the symbiotic process. Additionally, the expression of plant cell wall-degrading enzymes (PCWDEs) was observed during the pre-symbiotic stage, as the fungus approached the seeds, along with changes in amino acid metabolism. Thus, the dual-omics approach employed in this study yielded novel insights into the symbiotic relationship between orchids and ORM fungi and suggest that the ORM fungus responds to the presence of the orchid seeds prior to contact. [ABSTRACT FROM AUTHOR]

The orchid family is renowned for its enormous diversity in pollination biology. Many orchid species use deception to attract pollinators, and the main strategy in terrestrial orchids is food deception. Food‐deceptive orchids usually show a low number of pollinator visitations, making field observations of pollinators difficult. In this study visual census, pollinator capture and molecular analysis of pollinaria found on caught insects allowed us to obtain information on species composition of orchid pollinators. A total of 321 insects were caught; most specimens were hymenopterans (Apis mellifera, Bombus ruderatus and Eucera rufa) and coleopterans (Tropinota hirta and T. squalida). The identity of species to which pollinaria found on the insect's body belonged was confirmed by molecular analysis. Moreover, some individuals of Billaea lata (Tachinidae, Diptera) were captured and photographed with the pollinaria on their head. Two new and important results emerged clearly in this work: a dipteran, Billaea lata, pollinator of Anacamptis pyramidalis, and two beetles in the genus Tropinota are pollinators of Orchis italica. Our results confirm that generalized food‐deceptive orchids of the genera Orchis and Anacamptis show weak pollinator specificity. [ABSTRACT FROM AUTHOR]

Ionic driving forces provide the net electromotive force for ion movement across receptors, channels, and transporters, and are a fundamental property of all cells. In the nervous system, fast synaptic inhibition is mediated by chloride permeable GABAA and glycine receptors, and single-cell intracellular recordings have been the only method for estimating driving forces across these receptors (DFGABAA). Here we present a tool for quantifying inhibitory receptor driving force named ORCHID: all-Optical Reporting of CHloride Ion Driving force. We demonstrate ORCHID's ability to provide accurate, high-throughput measurements of resting and dynamic DFGABAA from genetically targeted cell types over multiple timescales. ORCHID confirms theoretical predictions about the biophysical mechanisms that establish DFGABAA, reveals differences in DFGABAA between neurons and astrocytes, and affords the first in vivo measurements of intact DFGABAA. This work extends our understanding of inhibitory synaptic transmission and demonstrates the potential for all-optical methods to assess ionic driving forces. Single-cell intracellular recordings have been used as the primary tool for estimating driving forces across inhibitory receptors within the nervous system. Here, the authors present ORCHID as an all-optical method to measure inhibitory receptor driving forces in targeted brain cell types. [ABSTRACT FROM AUTHOR]

ABSTRACT A new species of the tribe Malaxideae (Orchidaceae), Crepidium assamicum, is described and illustrated here as new species from Assam, North East India. The new taxon is superficially similar to Crepidium purpureum but differs in its habitat, plant size, long floral bract, very densely flowered inflorescences, leaf number, larger petiole size, both winged throughout and flower color. This species is confined to grow in open grassland near river bank of Dibru‐Soikhowa, Dibrugarh district of Assam, in a huge population comprising 500–600 individuals. The threat status of this new species is provisionally assessed here as “Threatened” following the IUCN Red List Categories and Criteria version 16 (2024). [ABSTRACT FROM AUTHOR]

BackgroundAimsMethodsResultsConclusionTo attract their pollinators non-rewarding orchids rely on various deception strategies that range from generalised food deception to floral mimicry of a specific model (Batesian mimicry).We evaluated whether the deceptive orchid Anacamptis morio may represent an initial step in the evolutionary trajectory from generalised food deception to Batesian mimicry by resembling the rewarding Polygala nicaeensis, a species with purple flowers very similar to those of A. morio.We assessed the pollination success of A. morio in relation to co-flowering rewarding species. Then, we estimated male and female reproductive success of A. morio depending on the presence of and similarity to the putative model P. nicaeensis.The pollination success of A. morio covaried with that of P. nicaeensis and its pollination efficiency was higher when the two species co-occurred. However, we did not find supporting evidence that A. morio mimicked its potential rewarding model. We also found that the orchids with stronger colour reflectance exhibited greater pollination success, according to a scenario of ecological facilitation rather than adaptive mimicry.Co-flowering rewarding species with a colour similar to the orchid may enhance the specific pollinator abundance and condition their foraging preference, hence producing a positive effect on the reproductive success of A. morio. [ABSTRACT FROM AUTHOR]

Orchids are among the most cultivated flowers in the world. Plants of Dendrobium thyrsiflorum (DT) and Cattleya wittigiana (CW), cultivated at the Botanic Garden of Bauru in São Paulo, Brazil, presented black rot symptoms. The causal organism was identified as P. palmivora on DT and P. nicotianae on CW orchids based on its morphological and molecular characterization. Inoculation caused disease symptoms and Koch's postulates were fulfilled by re-isolation of the pathogen. [ABSTRACT FROM AUTHOR]

A newly discovered species, Stereochilus linearifolius (Vandeae, Orchidaceae), which was found in Maguan (Yunnan Province, China), is described and illustrated. Detailed morphological examination revealed that S. linearifolius exhibits similarities to S. dalatensis, however, it distinguishes itself in terms of plant size, leaf dimensions (length and width), sepal width, spur shape, midlobe shape, as well as the coloration of lip, anther cap and stigma. [ABSTRACT FROM AUTHOR]

A new mycotrophic species of the genus Gastrodia (Orchidaceae), is described and illustrated from Arunachal Pradesh, India. The species is unique within the genus in having two oblong–linear calli which are parallelly arranged along the margins of the claw of the labellum, and white flowers. The new species is assessed as 'Endangered' according to the IUCN red list criteria. [ABSTRACT FROM AUTHOR]

ABSTRACT Understanding the nutritional ecology of orchids, particularly those in symbiosis with rhizoctonias, presents a complex challenge. This complexity arises partly from the absence of macroscopic fruit bodies in rhizoctonias, which impedes the acquisition of their stable isotope data. In this study, we investigated the fungal associations and isotopic signatures in the pelotons of Stigmatodactylus sikokianus (associated with non‐ectomycorrhizal [non‐ECM] rhizoctonias) and Chamaegastrodia shikokiana (associated with ECM rhizoctonias). Our research reveals elevated levels of 13C enrichment in S. sikokianus plants and their pelotons, similar to those found in fully mycoheterotrophic orchids and their mycobionts. Interestingly, C. shikokiana plants and their pelotons exhibited even higher levels of 13C and 15N enrichment than many other fully mycoheterotrophic species. Our findings imply that both ECM and saprotrophic mycobionts, including certain rhizoctonias, can fulfill the carbon needs of highly mycoheterotrophic orchids. This finding also indicates that 13C enrichment can be an indicator of mycoheterotrophy in at least some rhizoctonia‐associated orchids, despite the typically low 13C enrichment in non‐ECM rhizoctonias. Our demonstration of partial mycoheterotrophy in S. sikokianus suggests a broader prevalence of this nutritional strategy among orchids, given that almost all orchids are associated with non‐ECM rhizoctonias. [ABSTRACT FROM AUTHOR]

The orchid Dendrobium moniliforme faces endangerment due to habitat loss and illegal harvesting, necessitating the development of an optimized artificial propagation system to aid conservation and reintroduction efforts. This study evaluated the effects of three plant growth media, namely Murashige and Skoog (MS), Hyponex, and Orchid Maintenance Medium (OMM) (P668), and various organic additives (apple homogenate, banana homogenate, and coconut water) on the in vitro seedling growth of D. moniliforme. The results reveal that, in early postgermination stages, seedlings achieve maximum growth in the Hyponex medium, with a fresh weight (92 mg) and root length (2.7 cm) approximately 20-fold greater than those in the MS medium and OMM. After 6 months, for seedlings grown in MS medium and OMM with banana (50 g·L−1), the mean fresh weights were 29 and 107 mg, respectively; however, the highest biomass was observed in seedlings grown in the Hyponex medium with coconut water (50 mL·L−1), exhibiting a mean fresh weight of 201 mg. This study highlights Hyponex medium with coconut water as the most effective combination for promoting D. moniliforme growth and identifies suitable organic supplements for the in vitro cultivation of seedlings from asymbiotic seed culture. This propagation system offers valuable technical support for the mass production and conservation of this epiphytic orchid. [ABSTRACT FROM AUTHOR]

Plant taxonomy and phylogeny deal with very important problems related to the genetic diversity of populations found in different geographical regions, trying to present the variability of these populations but also to explain their origin. For this reason, such studies examining the conditioned diversity of plant populations were the subject of this Special Issue (SI) of the journal Plants. This SI contains ten original articles and one review article concerning phylogeography and related sciences, i.e., biogeography, taxonomy, and systematics, as well as the genetic variability that lies at the basis of these sciences. The articles included in the SI cover a wide range of topics, including the phylogeny and taxonomy of mosses, taxonomy and hybridization and phylogeny of the genus Chery, genetic diversity and phylogeography of fern, including relict species from the Macronesia area, taxonomy of the genus Aconitum, a species of orchid new to the Romanian flora, but also a proposal for a new phylogeographic division in Gansu Province (China) and a review of the role of the Hercynian Mountains in Shaping Plant Migration Patterns in the Pleistocene. [ABSTRACT FROM AUTHOR]

Plants and animals produce highly evolved, hierarchical systems that combine physicochemical material parameters with functional micro‐ and nanostructures to manage energy, motion, and species survival. These systems, besides providing cues on bottom‐up manufacturing of technological structures, can give insight on strategies for efficient energy management. Here is reported the observation of an optically interconnected network formed by the cells of the leaves of the Macodes petola jewel orchid that provides light harvesting and redistribution across its surface. The planar redistribution of light incident on the leaf is enabled by the distinctively rounded shape of the outer epidermal cells and by their arrangement in a short‐range ordered hexagonal lattice. Successful replication of a live leaf in a free‐standing biopolymer film validates the observation and opens avenues for the exploration of non‐traditional energy harvesting interfaces that are soft, conformal, and curvilinear. [ABSTRACT FROM AUTHOR]

Recently, there have been some reports on new species of the genus Luisia in Vietnam. There is disagreement among studies on the number of species in this genus. Our study gathers available documents and samples from herbariums in order to tally and classify them. Research results have recorded 13 species of the Luisia genus in Vietnam. The study also describes one taxon as a new species. A taxonomic key for the identification of all species of the Luisia genus known in Vietnam is also established. The study will be a useful reference for classification as well as the identification and description of new species belonging to the genus Luisia. [ABSTRACT FROM AUTHOR]

Orchids (Orchidaceae) are ornamental plants known for their high aesthetic value attributed to the shapes, colours, and fragrances of their flowers. Two types of hybrid orchids with attractive flowers, namely the Phalaenopsis 'OX Queen' orchid and the Dendrobium 'Cheddi Jagan' boast attractive flowers were used in this research, because of the beauty of its flower colour. The objective of this research is to characterise the morphology of flower colour and CHS (Chalcone Synthase) gene content that induces flower colour. The method used in this research analyzing the flower’s colour by using the RHS (Royal Horticultural Society) colour chart and molecular analysis by DNA genomic isolation and PCR amplification of gDNA for CHS gene specific primers. The results showed that purple colour is observed through the RHS, with P. 'OX Queen' coded as Deep Purple Pink (N73A) and D. 'Cheddi Jagan' coded as Strong Reddish Purple (N72C). The CHS gene can be amplified in P. ’OX Queen’ 1,287 bp and D. ’Cheddi jagan’ 3,731 bp. In both orchids, the results of amplification showed CHS motifs with conserved domains PLN03172 and PLN03170. The research results show that there is a significant difference in the morphology of the flowers of orchids. Purple colour is observed through the RHS, with P. 'OX Queen' coded as N73A and D. 'Cheddi Jagan' coded as N73C. The results showed that gDNA can be isolated by using CTAB method according to Murray and Thomson, and the CHS gene can be amplified by using CHS primers, resulting 1200 bp of P. 'OX Queen' and 2500 bp for D. 'Cheddi Jagan'. Through this study, preliminary data is expected to be obtained for future research, which is the formation of variegated flowers through editing the CRISPR/Cas9 genome in the CHS gene. This research is intended to support further studies on the formation of variegated flower patterns in P. 'OX Queen' and D. 'Cheddi Jagan’, focusing on the CHS gene using CRISPR/Cas9 technique. [ABSTRACT FROM AUTHOR]

Orchids are one of the largest and globally distributed plant families. Indonesia has the most types of orchids, estimated around 20% from the total species across the world. Mainly orchids used as an ornamental plant. This research aimed to elucidate another potential of orchids as possibly for herbal medicine plant. The potential of orchids as herbal medicine has been known for a long time, but there is lack of well-documented research. The research method used in this research is exploration on predetermined research sites that were conducted in Mount Tilu, West Java on 2022. Observation data of orchids were collected on the sites and the analysis was carried out in a qualitative descriptive approach by describing the data from the research results and comparisons were made through a literature review. Based on the research results, we found about 31 species from 28 genera consisting of 24 epiphytic orchids and 7 terrestrial orchids in the Mount Tilu Kuningan area, West Java. There are 4 endemic species categorised in Java; Chilochista javanica, Crepidium koordesii, Crepidium junghuhnii, and Taeniophyllum biocellatum. [ABSTRACT FROM AUTHOR]

Despite its relevance, the study of the inflorescence from a typological point of view generally goes unnoticed in taxonomy, which is fundamental for the comparison of structural elements of the same origin. Pleurothallidinae is not the exception, and its typology has not been studied in detail, causing incorrect interpretations of its structures and misapplication of terms. Here the morphology of Pleurothallidinae inflorescences is analyzed and discussed from a typological point of view, based on the detailed study of structural elements of living material, which are illustrated by photographs and diagrams. The study shows that the subtribe presents a generalized type of inflorescences formed by an abbreviated peduncle and branch system that cannot be seen with the naked eye. Each branch may produce coflorescences of different lengths with one or multiple flowers, also presenting different patterns of succession that determine the general appearance of the plant. Single-flowered coflorescences are dominant in members of the Octomeria and Restrepia affinities, while multi-flowered coflorescences dominate the Acianthera, Lepanthes, Masdevallia, Phloeophila, Pleurothallis and Specklinia affinities. A general and practical classification is established for the different types of coflorescences according to the length and number of flowers produced. Resumen: A pesar de su relevancia, el estudio de las inflorescencias desde un punto de vista tipológico pasa generalmente desapercibido en la taxonomía, lo cual es fundamental para la comparación de elementos estructurales de un mismo origen. Pleurothallidinae no ha sido la excepción, y su tipología no ha sido estudiada a detalle, provocando interpretaciones incorrectas de sus estructuras y mala aplicación de términos. Aquí se analiza y discute la morfología de las inflorescencias de Pleurothallidinae desde un punto de vista tipológico, basado en el estudio detallado de los elementos estructurales de material vivo, los cuales son ilustrados mediante fotografías o diagramas. El estudio demuestra que la subtribu presenta un tipo generalizado de inflorescencias formadas por un sistema de ramificación abreviado que no se observa a simple vista. Cada rama es capaz de producir coflorescencias de diferente longitud con una o múltiples flores, presentando también diferentes patrones de sucesividad que determina la apariencia general de la planta. Las coflorescencias de una solo flor es dominante en los clados miembros de las afinidades Octomeria y Restrepia, mientras que las coflorescencias de múltiples flores dominan las afinidades Acianthera, Lepanthes, Masdevallia, Phloeophila, Pleurothallis y Specklinia. Se establece una clasificación general y practica para los diferentes tipos de coflorescencias según la longitud y cantidad de flores producidas. [ABSTRACT FROM AUTHOR]

Vanda R.Br. is an epiphytic orchid genus with significant horticultural and ornamental value. Previous molecular studies expanded Vanda including some members from five other genera. However, the interspecific relationships of this recently radiated genus have remained unclear based on several DNA markers until now. In this study, the complete plastome has been used to infer the phylogenetic relationships of Vanda s.l. The five newly obtained plastomes ranged from 146,340 bp to 149,273 bp in length, with a GC content ranging from 36.5% to 36.7%. The five plastomes contained 74 protein-coding genes (CDSs), 38 tRNAs, and 8 rRNAs, and their ndh genes underwent loss or pseudogenization. Comparative plastome analyses of 13 Vanda species revealed high conservation in terms of genome size, structure, and gene order, except for a large inversion from trnGGCC to ycf3 in V. coerulea. Moreover, six CDSs and five non-CDSs were selected as candidate DNA barcodes. Our phylogenetic analyses demonstrated that Vanda s.l. is a monophyletic group with high supporting values based on five different datasets (complete plastome with one IR, 68 CDSs, LSC, five hypervariable non-CDSs, and six hypervariable CDSs), while the phylogenetic relationships among species were fully resolved based on the complete plastome with one IR dataset. Our results confirmed that the complete plastome has a great power in resolving the phylogenetic relationships of recently radiated lineages. [ABSTRACT FROM AUTHOR]

• Paphiopedilum spp. is known as lady slipper orchid. • Embryogenesis in Paphiopedilum spp. can be induced with plant growth regulator. • Development of somatic embryos in Paphiopedilum spp. is the same as zygotic embryos. • The homologous embryo gene RKD4 is present and functional in Paphiopedilum spp. Paphiopedilum spp. is one of the terrestrial orchids that is interesting as an ornamental plant. This orchid flower has a distinctive characteristic, namely its labellum resembles a sac, so it is sought after by ornamental flower collectors because of its uniqueness. This orchid is included in the Appendix I group according to CITES, namely a critical species that is threatened with extinction, so it needs to be conserved both in situ and ex situ. Ex situ conservation can be done by propagating orchids using in vitro culture techniques. The objective of this research is to carry out mass propagation of 3 species of Paphiopedilum spp orchids: P. supardii, P. primulinum, P. glaucophyllum through somatic embryogenesis and to characterize the existence of embryo gene RKD4 homolog in Paphiopedilum orchids. The method is to culture the nodes slices in dark conditions for 2 weeks, and then changed to photoperiod mode 16:8 hours (dark:light) on ½ MS media plus a combination of 2,4-D or NAA with TDZ. The somatic embryo were analyzed anatomically. This method is an improvement over previously reported methods for Paphiopedilum spp. due to its efficiency and reproducibility for conservation. We concluded that ½ MS media with a combination of NAA or 2,4D with TDZ were able to induce somatic embryogenesis. The result show that 3 mg L−1 NAA was the best PGRs for PLBs induction in P. supardii (50 %), 1 mg L−1 2,4-D + 0.5 mg L−1 TDZ was the best PGRs for callus embryogenic induction in P. primulinum (20 %), and 1 mg L−1 NAA was the best PGRs for PLBs induction in P. glaucophyllum (33 %). [ABSTRACT FROM AUTHOR]

Cymbidium ensifolium, a prominent orchid species, is both highly valued for its ornamental qualities and commercially cultivated. However, the species has a considerable challenge in its breeding efforts due to the lengthy period of 7–8 years required for it to transition from seed germination to flowering. BBXs are multifunctional proteins that modulate the actions of critical regulators including HY5 and COP1 in response to blue light, ultimately impacting photomorphogenic processes. In this study, BBX proteins, known for their essential roles in regulating developmental processes under various light conditions, were chosen as the main subject of investigation. The outcome reveals the presence of 19 BBX genes in their genome. The genes are classified into four separate clades and dispersed among 12 out of the 20 chromosomes. Located in the nuclear, physicochemical properties of proteins, analysis of the promoter region reveals the existence of almost 800 cis-acting elements, highlighting the complex regulatory mechanisms that control the expression of the CeBBXs in various organs, as well as their response to light and hormone inputs. Moreover, the examination of differential expression under blue light therapy reveals their involvement in photomorphogenic reactions. The expression of CeBBXs exhibits substantial alterations as the duration of exposure to blue light increases. These findings contribute to a deeper understanding of the roles that BBX genes serve in C. ensifolium, providing a basis for future studies on the functions and regulatory mechanisms of BBX members in the context of floral initiation and development within this species. [ABSTRACT FROM AUTHOR]

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In the literature of the last century, there was the recurrent claim that an orchid called amatzauhtli was used as an adhesive in the manufacture and repair of indigenous Mexican handmade paper or amate—an attestation some scholars still repeat even today. Here, we describe the present use of the orchid Cyrtopodium macrobulbon in the final step of amate papermaking in the village of San Pablito, Puebla. After amate sheets are dried on and subsequently peeled from wooden boards, the pseudobulbs of the orchid are cut and used as an adhesive to patch over any holes or other imperfections that remain on the paper. Cyrtopodium macrobulbon is locally called küiä by Otomí papermakers, which they translate to Spanish as "pegamento" (glue). We also suggest that the amatzauhtli described in the sixteenth century by Hernández—widely reported as Epidendrum pastoris—actually refers to a very different species, Trichocentrum pachyphyllum, and we discuss the putative use of this and other orchids in pre-Hispanic amate making. [ABSTRACT FROM AUTHOR]

To prepare very-long-chain fatty acids and alkenes (VLCFAs and VLC alkenes) that are known pollinator attractants for sexually deceptive orchids, and biosynthetic precursors thereof, we applied a methodology allowing us to prepare monounsaturated VLCFAs with chain lengths up to 28 carbons and VLC alkenes up to 31 carbons. We implemented a coupling reaction between commercially available terminal alkynes and bromoalkanoic acids to prepare VLCFAs, allowing the products to be formed in two steps. For VLC alkenes, with many alkyltriphenylphosphonium bromides commercially available, we applied a Wittig reaction approach to prepare (Z)-configured monoenes in a single step. Using practical methods not requiring special reagents or equipment, we obtained 11 VLCFAs in > 90% isomeric purity, and 17 VLC alkenes in > 97% isomeric purity. Such general and accessible synthetic methods are essential for chemical ecology and biochemistry research to aid researchers in unambiguously identifying isolated semiochemicals and their precursors. [ABSTRACT FROM AUTHOR]

Background: A retrotransposon HORT1 in the promoter of the anthocyanin activator gene PeMYB11, microRNA858 (miR858) that targets PeMYB11, and a repressor PeMYBx have been implicated in pigmentation patterning diversity of harlequin Phalaenopsis orchids. However, the interrelationship among them remains to be elucidated. Results: To understand how these factors interact to generate anthocyanin spots in Phalaenopsis, we successfully developed a mathematical model based on the known reaction–diffusion system to simulate their interplay and refined the conceptual biological model. Intriguingly, the expression of both PeMYBx and PeMYB11 were in phase for purple spot formation, even though they showed adverse effects on anthocyanin accumulations. An increase in the self-activation rate of PeMYB11 resulted in the increased size of purple spots, but no effects on spot fusion. Decreased degradation rate of miR858 in the purple regions, led to disruption of the formation of spotted pigmentation patterning and a full-red pigmentation pattern. Significantly, the reduced miR858 level promotes the fusion of large dark purple dots induced by the solo-LTR of HORT1, eventually generating the purple patches. In addition, the spatially heterogeneous insertion of HORT1 caused by the remnant solo-LTR of HORT1 derived from random homologous unequal recombination of HORT1 in individual cells of floral organs could explain the diverse pigmentation patterning of harlequin Phalaenopsis. Conclusions: This devised model explains how HORT1 and miR858 regulate the formation of the pigmentation patterning and holds great promise for developing efficient and innovative approaches to breeding harlequin Phalaenopsis orchids. [ABSTRACT FROM AUTHOR]

Cheirostylis tortilacinia C. S. Leou (Orchidaceae), has been reported for the first time in India from Arunachal Pradesh and West Bengal. Cheirostylis tortilacinia is morphologically allied to Cheirostylis parvifolia during anthesis but clear differences can be traced on closer examination of the vegetative morphology and the floral characters. Detailed taxonomical description along with photoplates, species comparison table with the allied species from India, and notes on typification have been provided in this current communication to aid in easy identification of this species. [ABSTRACT FROM AUTHOR]

Orchids and arbuscular mycorrhiza (AM) plants evolved independently and have different structures and fungal partners, but they both facilitate nutrient uptake. Orchid mycorrhiza (OM) supports orchid seed germination, but unlike AM, its role in disease resistance of mature plants is largely unknown. Here, we examined whether OM induces systemic disease resistance against a necrotrophic pathogen in a similar fashion to AM. We investigated the priming effect of mycorrhizal fungi inoculation on resistance of a terrestrial orchid, Bletilla striata, to soft rot caused by Dickeya fangzhongdai. We found that root colonization by a compatible OM fungus primed B. striata seedlings and induced systemic resistance against the infection. Transcriptome analysis showed that priming was mediated by the downregulation of jasmonate and ethylene pathways and that these pathways are upregulated once infection occurs. Comparison with the reported transcriptome of AM fungus-colonized rice leaves revealed similar mechanisms in B. striata and in rice. These findings highlight a novel aspect of commonality between OM and AM plants in terms of induced systemic resistance. [ABSTRACT FROM AUTHOR]

Plant growth regulators play a crucial role in the proliferation of protocorm-like bodies through somatic embryogenesis in Phalaenopsis orchids. Additionally, media components and cultural systems can impact their proliferation and reduce costs. This research aimed to enhance proliferation rates of orchid protocorm–like bodies and decrease costs of both media providing and culture systems. To achieve this, protocorm explants were cultivated in four different systems: solid, liquid permanent immersion (Erlenmeyer flasks on a shaker), and temporary immersion (RITA® and FA-Bio bioreactor, a new laboratory mini-bioreactor). The media used included half-strength Murashige and Skoog (1/2 MS), modified FAST medium (MFAST), and low-cost medium (LC). The solid medium contained thidiazuron at concentrations of 0, 1.5, or 3.0 mg L−1. Solid 1/2 MS without thidiazuron was the control. Protocorm-like bodies in solid LC and MFAST exhibited high chlorophyll and anthocyanin content. Their proliferation rates increased by 32.6% and 29.6%, respectively, while culture costs decreased by 45.2% and 43.1%, respectively, compared to solid 1/2 MS with 3.0 mg L−1 thidiazuron. The production of protocorm-like bodies and their carbohydrate content were significantly higher in MFAST and LC media, compared to 1/2 MS media across all culture systems. The RITA® bioreactor with liquid LC showed higher proliferation rates than the other treatments. Liquid LC reduced costs by 57.6% compared to solid LC, making it a cost-effective option for mass propagation. The FA-Bio bioreactor reduced costs by 70.5% compared to RITA® for laboratory research evaluations in liquid culture. MFAST media in FA-Bio bioreactors can be used commercially for cost-effective propagation of Phalaenopsis orchids. [ABSTRACT FROM AUTHOR]

Ophrys helenae of the family Orchidaceae is a Balkan endemic species. It has been recorded on Mt Galichica (May 2015) and the shores of Lake Prespa (May 2021). These are the first records for the species in the flora of the Republic of North Macedonia. Data on the distribution, habitat preferences and population size are also presented in the manuscript. [ABSTRACT FROM AUTHOR]

Dendrobium species, esteemed as a group of orchid plants with important ornamental and medicinal value, are currently experiencing significant developmental advancements. This research encompasses a comprehensive review of Dendrobium tissue culture literature spanning 2008 to 2023, sourced from the Web of Science Core Collection database. Employing the bibliometric analysis tool CiteSpace, we conducted a visualization and presentation of data encompassing research institutions, authorship patterns, key terminology, and emergent themes, elucidating the current status, hotspots, and frontiers of Dendrobium tissue culture research. After thorough screening, a total of 261 papers were included in this study. The publication count exhibited a consistent annual increase. Chinese Acad Sci, Univ Sains Malaysia, North Eastern Hill Univ, Univ Debrecen, and Univ Putra Malaysia emerged as primary research institutions, while a core team led by J.A. Teixeira da Silva, S. Sreeramanan, S. Kumaria, and N. Chen played a dominant role. Central research themes revolve around optimizing the tissue culture system of medicinal Dendrobium, and exploring the genetic stability and gene function. Furthermore, the field is witnessing a trajectory towards future multidisciplinary cross-collaboration. [ABSTRACT FROM AUTHOR]

In some biogeographic regions, many threatened plant species occur in habitats that periodically experience bushfire. However, we currently have relatively little information on how important plant–animal and plant–fungus interactions are affected by these fires. For the threatened sexually deceptive orchid Caladenia tessellata we test whether pollination rate, frequency of florivory, and the species of mycorrhizae the plant associates with differ between burnt and unburnt sites. Interestingly, pollination rates were unaffected by fire, demonstrating that populations of the thynnine wasp pollinator can persist post-fire. However, there was a significant negative relationship between number of flowers in a population and pollination success, which is likely a by-product of a deceptive pollination strategy. Despite the presence of vertebrate herbivores, florivory rates were low in both burnt and unburnt sites. Caladenia tessellata associated primarily with the mycorrhiza Serendiptia australiana , regardless of fire history. While our results suggest resilience to a one-off summer fire for the ecological interactions that we measured, it would be interesting to investigate the effects of fire frequency and time of year. High reproductive rates in small populations of C. tessellata suggest these populations may be viable and that retaining them is a high priority for conservation. [ABSTRACT FROM AUTHOR]

Gastrochilus is an orchid genus containing about 70 species in tropical and subtropical Asia with high morphological diversity. The phylogenetic relationships among this genus have not been fully resolved, and the plastome evolution has not been investigated either. In this study, five plastomes of Gastrochilus were newly reported, and sixteen plastomes of Gastrochilus were used to conduct comparative and phylogenetic analyses. Our results showed that the Gastrochilus plastomes ranged from 146,183 to 148,666 bp, with a GC content of 36.7–36.9%. There were 120 genes annotated, consisting of 74 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. No contraction and expansion of IR borders, gene rearrangements, or inversions were detected. Additionally, the repeat sequences and codon usage bias of Gastrochilus plastomes were highly conserved. Twenty hypervariable regions were selected as potential DNA barcodes. The phylogenetic relationships within Gastrochilus were well resolved based on the whole plastome, especially among main clades. Furthermore, both molecular and morphological data strongly supported Haraella retrocalla as a member of Gastrochilus (G. retrocallus). [ABSTRACT FROM AUTHOR]

Salep, a traditional Turkish beverage, derives its name from its primary component: salep powder (SP), which is sourced from the tubers of certain orchid species. This study investigated various physicochemical attributes (including dry matter, protein content, pH, titration acidity, water activity, color, serum separation, and zeta potential), as well as rheological and sensory characteristics of salep beverages. These drinks were prepared by substituting SP with chia (Salvia hispanica L.) seed mucilage powder (MP) with different ratios (10%, 20%, 30%, and 40%). The substitution of SP with MP did not influence the dry matter and protein contents or the pH and acidity values of the drinks significantly (p >.05). The inclusion of MP in the formulation of salep drinks resulted in a decrease in lightness (L*) and a* color values while increasing the b* color values. However, consumer perception, as indicated by color difference values (∆E*), showed no distinguishable difference between drinks containing MP and control drinks. Furthermore, higher ratios of MP led to increased apparent viscosity values in the drinks and effectively prevented or significantly reduced serum separation observed in control drinks (p <.05). Remarkably, sensory evaluations revealed that substituting up to 30% of SP with MP did not negatively impact the overall sensory properties of the drinks (p >.05), suggesting that MP could be recommended as a feasible alternative. This substitution has the potential to contribute to the conservation of orchid plants, the primary source of salep, while also offering cost‐saving benefits in the production of salep drinks. [ABSTRACT FROM AUTHOR]

Background and Aims The deceptive strategies by which orchids are pollinated and how these are capable of attracting pollinators remain understudied with regard to their implications for plant fitness. Despite their ecological importance, limited investigations have been conducted on sexual deception and shelter mimicry in orchid species, making this a compelling avenue in orchid biology research. To expand the knowledge of these reproductive mechanisms, we studied the pollination of Serapias lingua and S. parviflora in co-occurring and isolated sites in the Balearic Islands (Spain), further accentuated by the presence of a hybrid, indicating shared pollinators. Methods We employed bagging and hand pollination experiments to examine the reproductive biology of the two species. Furthermore, we evaluated the influence of phenotypical and ecological factors on reproductive success, including biometric measurements, reproductive performance and neighbourhood diversity (co-flowering and pollinator communities). Key Results Reproductive mechanisms between these two orchid species exhibit substantial disparities. Serapias lingua relies primarily on insect-mediated pollination, while S. parviflora demonstrates self-reproduction capacity. Although events of open pollination are rare, hybridization occurs predominantly when S. lingua is the pollen donor. Fruit set in S. parviflora was positively correlated with plant height, while in S. lingua it was negatively associated with flower size. The coexistence of the two species positively affected pollinium removal in S. parviflora , but did not exert an influence on reproductive traits in S. lingua. Overall, biometric parameters were diminished in isolated compared with co-occurring sites. At the community level, the increased diversity of co-flowering species in the vicinity exhibited an inhibitory effect on pollinium removal in S. parviflora. Conclusions Under a context of pollinator loss or phenological mismatch between pollinator presence and flowering, the selfing capacity of S. parviflora would guarantee reproduction whereas S. lingua survival would be compromised. Furthers studies are needed to assess the effects of phenotypical and ecological factors on reproductive success of S. lingua in pollinator-decline scenarios. [ABSTRACT FROM AUTHOR]

The Journal of Plant Ecology (JPE) is an Open Access journal that covers a wide range of topics within the field of plant ecology. It is sponsored by the Botanical Society of China and the Institute of Botany, Chinese Academy of Sciences. A recent analysis of JPE's publications from 2018 to 2022 reveals that the majority of articles focus on forestry, soil science, phylogenetics & genomics, crop science, and plant pathology. These research areas cover various topics such as seed dispersal, dendrochronology, microbial biomass, permafrost, and phosphorus. The analysis also includes tables listing representative articles in each research area and compares JPE's publication volume and impact with other similar journals. This information can be valuable for researchers seeking to explore the themes covered in JPE and understand its publication trends and impact. [Extracted from the article]

This study profiled the various endophytic fungi isolated from the orchid Cymbidium sp. and their L-asparaginase production and antioxidant potential. The L-asparaginase production was first screened through qualitative plate screening then quantified by the Nesslerization method. The antioxidant potential was quantified via the 2,2-diphenyl-1-picrylhydrazyl assay. A total of 30 endophytic fungi were isolated and all fungal isolates exhibited various degrees of radical scavenging activities (45.28% to 76.4%). Isolate Lasiodiplodia theobromae (C11) had the highest antioxidant capacity, represented by the lowest IC50 value (5.75 mg/mL) and highest ascorbic acid equivalent antioxidant capacity value (12.17 mg/g). Additionally, 16 isolates produced L-asparaginase (53.33%), which includes primarily species of Fusarium proliferatum, Fusarium fujikuroi, Fusarium incarnatum, and Fusarium oxysporum. A new isolate has also been discovered from Cymbidium orchid, Buergenerula spartinae (C28), which showed the highest L-asparaginase activity (1.736 unit/mL). These findings supported the postulation that medicinal species of Orchidaceae such as Cymbidium sp. harbor endophytes that are producers of L-asparaginase and antioxidants with various potential applications. [ABSTRACT FROM AUTHOR]

Following the IUCN criteria, we assess the risk of extinction for five orchid species recorded for the first time from Colombia: Acianthera viridis (Luer & Hirtz) Luer, Dichaea lankesteri Ames, Epidendrum lavendulum Hágsater, Masdevallia ariasii Luer, and Stenia stenioides (Garay) Dodson & R.Escobar. We propose a preliminary global Red List categories of Endangered, Least Concern, Endangered, Vulnerable, and Least Concern, respectively, for these species. The main threats of these orchids are habitat degradation, small and degraded AOO and EOO, and a small number of known populations. The Caraño river basin, where these species occur in Colombia, is an important site for orchid conservation. Consequently, strategies are needed to ensure its preservation.

Euglossine bees are key pollinators of various plant species in the Neotropical region. Therefore, studying euglossine bee ecology is important for the development of conservation strategies. This study aimed to evaluate the vertical distribution of these bees in a "terra firme" forest fragment in the state of Rondônia, Brazil. The collections were carried out fortnightly from June 2017 to May 2018. The bees were sampled in the understory (1.5 m in height) and the canopy (12 m in height), using six aromatic compounds. A total of 9793 specimens were collected, representing 42 species of four genera. Statistically, the abundance of euglossines was higher in the understory, while the richness did not differ between strata. Eulaema Lepeletier, 1841 and Exaerete Hoffmannsegg, 1817 species were more abundant in the understory, while Euglossa Latreille, 1802 species were more abundant in the canopy stratum. Eufriesea Cockerell, 1908 species showed no difference in abundance between strata. In addition, nine new occurrences were recorded for the Rondônia state. [ABSTRACT FROM AUTHOR]

A variety of ecosystems can be found on the eastern flank of the Peruvian Andean-Amazonian piedmont. Amongst these, seasonally flooded forests (which include many peatlands) have attracted scientific attention because of the ecosystem services they provide. Our research was conducted in the Tingana flooded forests situated in the Alto Mayo Valley, San Martin (Peru). The canopies and branches of phorophytes (epiphyte-bearing plants) located within fourteen 20 × 20 m plots at two study sites were accessed using climbing equipment, and 107 epiphytic species were recorded. The epiphyte genera with the highest diversity were Epidendrum (15 species), Asplenium (7 species), Anthurium (6 species) and Peperomia (5 species), and the phorophyte with the highest epiphyte diversity was Ficus trigona. The richness estimators (Chao1 and ACE) accounted for > 75.3 % of the species present, with Stratum III being the most abundant and diverse. Demographic studies will be needed to comprehend the potential consequences of climate change for the epiphyte communities of flooded forests as they recover from disturbance.

Abstract Biological invasions threaten global biodiversity, altering landscapes, ecosystems, and mutualistic relationships like pollination. Orchids are one of the most threatened plant families, yet the impact of invasive bees on their reproduction remains poorly understood. We conduct a global literature survey on the incidence of invasive honeybees (Apis mellifera) on orchid pollination, followed by a study case on Australian orchids. Our literature survey shows that Apis mellifera is the primary alien bee visiting orchids worldwide. However, in most cases, introduced honeybees do not deposit orchid pollen. We also test the extent to which introduced honeybees affect orchid pollination using Diuris brumalis and D. magnifica. Diuris brumalis shows higher fruit set and pollination in habitats with both native and invasive bees compared to habitats with only introduced bees. Male and female reproductive success in D. magnifica increases with native bee abundance, while conversely pollinator efficiency decreases with honeybee abundance and rises with habitat size. Our results suggest that introduced honeybees are likely involved in pollen removal but do not effectively deposit orchid pollen, acting as pollen wasters. However, Apis mellifera may still contribute to pollination of Diuris where native bees no longer exist. Given the global occurrence of introduced honeybees, we warn that certain orchids may suffer from pollen depletion by these invaders, especially in altered habitats with compromised pollination communities.

Abstract Generalization is difficult to quantify, and many classifications exist. A beta diversity framework can be used to establish a numeric measure of generalist tendencies that jointly describes many important features of species interactions, namely spatiotemporal heterogeneity. This framework is promising for studying generalized symbiotic relationships of any form. We formulated a novel index, turnover importance (T). T describes spatiotemporal heterogeneity in interactor assemblages, an inherent feature of generalist relationships that is not captured by available metrics. We simulated the behaviour of T relative to other available metrics, calculated T for native North American orchid‐insect relationships, and tested correlations between T and eco‐geographic variables. We performed case studies to demonstrate applications of T for conservation and eco‐evolutionary studies. T behaves predictably across simulations, and dynamically interacts with site number, gamma diversity, and species range sizes. T is moderately sensitive to sampling depth. Orchids with higher T scores occupy larger ranges and broader climatic niches. Alternative interactor‐specific measures of generalism are best employed for local‐level community networks over short timespans. While these interactor metrics can assess use versus availability in local communities, T can be used to measure spatiotemporal patterns of variation in interactor assemblages across a focal species' range. This study provides a roadmap for future work focused on better understanding the patterns and consequences of generalized relationships.

AbstractThe cultivation efficiency and quality improvement of Phalaenopsis sp. production through mineral nutrition has been widely studied. The objective of this study was to evaluate the effects of different concentrations of calcium (Ca) in the nutrient solution on the growth, nutrient uptake, and overall health of Phalaenopsis sp. Seedlings obtained from in vitro propagation at 6 months of age were fed biweekly with a nutrient solution suggested by Hoagland and Arnon with modified Ca concentrations of 0 mM, 1.25 mM, 2.5 mM, 5 mM, 7.5 mM, and 10 mM. After 24 months, characteristics such as number of leaves, width and length of the largest leaf, total leaf area, dry mass of leaves and roots, leaf texture, and number and dry mass of flowers were evaluated. Macronutrient content was determined from leaf dry mass. Substrate pH and electrical conductivity were also measured. Increasing Ca concentrations up to 6.25 mM improved leaf length, total leaf area, number of flowers and flower dry mass. Leaf texture and electrical conductivity of the substrate increased up to a Ca concentration of about 2.5 mM. Leaf nitrogen and phosphorus contents increased with higher Ca concentrations. Optimal Ca fertilization at 6.25 mM had positive effects on both vegetative and reproductive growth, with no visual symptoms of Ca deficiency observed during vegetative development. These results emphasize the importance of precise and tailored nutrient management, not only to avoid hidden deficiencies, but also to maximize the quality and commercial value of Phalaenopsis sp. plants. [ABSTRACT FROM AUTHOR]

The Ogasawara Islands, isolated from the continent throughout their geological history, harbor abundant endemic species. However, 32% of the native plant species are on the Japanese Red List, signaling their endangered status. Among these endangered species, Calanthe hoshii stands out as highly susceptible to extinction. Two wild and 89 ex situ individuals were alive in 2020, but the last known wild individual died in October 2021, indicating this species may have become extinct in the wild. Despite the conservation efforts under the Act for the Conservation of Endangered Species of Wild Fauna and Flora, the lack of essential information regarding genetic diversity and population structure among the remaining individuals poses a significant obstacle to developing effective conservation measures. In this research, we conducted a genetic analysis of the wild and ex situ individuals, which revealed notably reduced genetic diversity between individuals, with individual heterozygosity levels (1.0 × 10−5) measuring one‐ninth of those observed within a closely related species Calanthe triplicata (1.5 × 10−4). Comprehensive genetic analysis revealed that C. hoshii consisted of three genetic clusters of different sizes: cluster 1 comprised 95% of the total population, while clusters 2 and 3, with few individuals, were only found in the ex situ populations at Koishikawa Botanical Garden. Since extant C. hoshii maintains a remarkably low genetic diversity at both individual and population levels, it is necessary to consider future management strategies, such as artificial breeding among different clades identified in this study, to safeguard the stability and resilience of this species. [ABSTRACT FROM AUTHOR]

It is challenging to make nocturnal observations of the natural behaviour of flower‐visiting moths as they are highly sensitive to visible artificial light sources. One solution, implemented here, is to use specially‐adapted close‐focusing camera traps that rely on infrared wavelengths for detection and illumination of small insect subjects. We investigated the pollination system of Bonatea saundersiodes, a rare African terrestrial orchid that is phylogenetically nested in the large Habenaria clade. We used modified camera traps and direct observations to study the pollination system of B. saundersioides. We quantified floral traits, including morphology, nectar, spectral reflectance and scent chemistry. Flowers of this orchid species were found to be pollinated exclusively by settling noctuid moths. Moth visits to the orchid were recorded throughout the night, with peaks of activity after dusk and just before dawn. Pollinaria of the orchid are attached between the palps of visiting moths. Floral traits generally consistent with settling moth pollination include the relatively short floral spurs (ca. 20 mm) containing small amounts of nectar, white and green perianth segments, and the floral scent which is produced at night and is dominated by β‐ocimene and other terpenoid compounds. This study demonstrates that close‐focusing camera traps have tremendous potential to improve our understanding of plant–pollinator interactions which are not easy to study using traditional methods. [ABSTRACT FROM AUTHOR]

Vanilla planifolia is native to the Mexican tropics. Despite its worldwide economic importance as a source of vanilla for flavoring and other uses, almost all vanilla is produced by expensive hand-pollination, and minimal documentation exists for its natural pollination and floral visitors. There is a claim that vanilla is pollinated by Melipona stingless bees, but vanilla is more likely pollinated by orchid bees. Natural pollination has not been tested in the Yucatán region of Mexico, where both vanilla and potential native bee pollinators are endemic. We document for the first time the flowering process, nectar production and natural pollination of V. planiflora, using bagged flower experiments in a commercial planting. We also assessed the frequency and visitation rates of stingless bees and orchid bees on flowers. Our results showed low natural pollination rates of V. planifolia (~ 5%). Only small stingless bees (Trigona fulviventris and Nannotrigona perilampoides) were seen on flowers, but no legitimate visits were witnessed. We verified that there were abundant Euglossa and fewer Eulaema male orchid bees around the vanilla plants, but neither visited the flowers. The introduction of a colony of the stingless bee Melipona beecheii and the application of chemical lures to attract orchid bees failed to induce floral visitations. Melipona beecheii, and male orchid bees of Euglossa viridissima and E. dilemma may not be natural pollinators of vanilla, due to lack of attraction to flowers. It seems that the lack of nectar in V. planifolia flowers reduces the spectrum of potential pollinators. In addition, there may be a mismatch between the attractiveness of vanilla floral fragrances to the species of orchid bees registered in the studied area. Chemical studies with controlled experiments in different regions would be important to further elucidate the potential pollinators of vanilla in southern Mexico. [ABSTRACT FROM AUTHOR]

As an important genus in Orchidaceae, Cymbidium has rich ecological diversity and significant economic value. DNA binding with one zinc finger (Dof) proteins are pivotal plant-specific transcription factors that play crucial roles in the growth, development, and stress response of plants. Although the Dof genes have been identified and functionally analyzed in numerous plants, exploration in Orchidaceae remains limited. We conducted a thorough analysis of the Dof gene family in Cymbidium goeringii, C. ensifolium, and C. sinensis. In total, 91 Dof genes (27 CgDofs, 34 CeDofs, 30 CsDofs) were identified, and Dof genes were divided into five groups (I–V) based on phylogenetic analysis. All Dof proteins have motif 1 and motif 2 conserved domains and over half of the genes contained introns. Chromosomal localization and collinearity analysis of Dof genes revealed their evolutionary relationships and potential gene duplication events. Analysis of cis-elements in CgDofs, CeDofs, and CsDofs promoters showed that light-responsive cis-elements were the most common, followed by hormone-responsive elements, plant growth-related elements, and abiotic stress response elements. Dof proteins in three Cymbidium species primarily exhibit a random coil structure, while homology modeling exhibited significant similarity. In addition, RT-qPCR analysis showed that the expression levels of nine CgDofs changed greatly under heat stress. CgDof03, CgDof22, CgDof27, CgDof08, and CgDof23 showed varying degrees of upregulation. Most upregulated genes under heat stress belong to group I, indicating that the Dof genes in group I have great potential for high-temperature resistance. In conclusion, our study systematically demonstrated the molecular characteristics of Dof genes in different Cymbidium species, preliminarily revealed the patterns of heat stress, and provided a reference for further exploration of stress breeding in orchids. [ABSTRACT FROM AUTHOR]

Prosthechea karwinskii is an orchid endemic to Mexico, threatened by the destruction of its habitat and the extraction of specimens to meet its demand for ornamental and religious use. Most of its populations, including the most locally abundant ones, are found in Oaxaca state. Variations in some floral traits have been observed in these populations. We implemented a morphometric analysis to assess their floral variation and identify the most significant characters in the morphological patterns of this orchid. Floral samples were collected from 17 populations of P. karwinskii in Oaxaca, as well as from specimens used as ornaments during Easter in an Oaxacan community (Zaachila), whose origin is unknown. Sampling of natural populations covered the environmental, geographic, and morphological variation of the species. We performed an analysis of variance (ANOVA), principal component analysis (PCA), canonical variate analysis (CVA), and cluster analysis, including 185 individuals and 45 variables (12 of them were discarded in the multivariate analyses due to high correlation). Characters of the column, lateral sepal, and labellum were most informative for the observed morphological patterns. Albarradas showed the greatest morphological differentiation, mainly due to the column. In general, individuals from the same locality tended to overlap more, especially the populations of Jaltianguis and Yahuiche, which were different from the geographically close population of Etla. Teposcolula presented the highest values in perianth characters, unlike Sola_Rancho Viejo. The specimens recovered from religious ornaments were morphologically more similar to those from Yanhuitlan and Etla. This morphometric analysis identified characters as potential taxonomic markers for P. karwinskii and related species, showing its potential to associate specimens of unknown origin with their probable geographical region. Our work encourages working on collaborative conservation strategies to ensure the long-term permanence of both the species and its traditional uses. [ABSTRACT FROM AUTHOR]

The scent of Anacamptis species has been analyzed by using HS-SPME-GC–MS. The sample was collected in Basilicata (Southern Italy). Every species showed a different composition of the scent in the analyses we performed. 1,2,4-Trimethoxybenzene and methyl 4-mehoxybenzoate were the main components of that of Anacamptis coriophora subsp. fragrans. The scent of Anacamptis laxiflora was due to the presence of caryophyllene. Linear hydrocarbons but also decanal were components of the scent of Anacamptis pyramidalis. Eucalyptol was found in the scent of Anacamptis papilonacea. Finally, β-sesquiphellandrene was the main component of the scent of Anacamptis morio. [ABSTRACT FROM AUTHOR]

The plastid-targeted transcription factor Whirly1 (WHY1) has been implicated in chloroplast biogenesis, plastid genome stability, and fungal defense response, which together represent characteristics of interest for the study of autotrophic losses across the angiosperms. While gene loss in the plastid and nuclear genomes has been well studied in mycoheterotrophic plants, the evolution of the molecular mechanisms impacting genome stability is completely unknown. Here, we characterize the evolution of WHY1 in four early transitional mycoheterotrophic orchid species in the genus Corallorhiza by synthesizing the results of phylogenetic, transcriptomic, and comparative genomic analyses with WHY1 genomic sequences sampled from 21 orders of angiosperms. We found an increased number of non-canonical WHY1 isoforms assembled from all but the greenest Corallorhiza species, including intron retention in some isoforms. Within Corallorhiza, phylotranscriptomic analyses revealed the presence of tissue-specific differential expression of WHY1 in only the most photosynthetically capable species and a coincident increase in the number of non-canonical WHY1 isoforms assembled from fully mycoheterotrophic species. Gene- and codon-level tests of WHY1 selective regimes did not infer significant signal of either relaxed selection or episodic diversifying selection in Corallorhiza but did so for relaxed selection in the late-stage full mycoheterotrophic orchids Epipogium aphyllum and Gastrodia elata. Additionally, nucleotide substitutions that most likely impact the function of WHY1, such as nonsense mutations, were only observed in late-stage mycoheterotrophs. We propose that our findings suggest that splicing and expression changes may precede the selective shifts we inferred for late-stage mycoheterotrophic species, which therefore does not support a primary role for WHY1 in the transition to mycoheterotrophy in the Orchidaceae. Taken together, this study provides the most comprehensive view of WHY1 evolution across the angiosperms to date. [ABSTRACT FROM AUTHOR]