29 results on '"Nagatomo R"'
Search Results
2. Association of SCFA in gut microbiome and clinical response in solid cancer patients treated with andi-PD-1 antibody
- Author
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Nomura, M., primary, Nagatomo, R., additional, Inoue, K., additional, Doi, K., additional, Shimizu, J., additional, Baba, K., additional, Saito, T., additional, Matsumoto, S., additional, and Muto, M., additional
- Published
- 2019
- Full Text
- View/download PDF
3. 1249P - Association of SCFA in gut microbiome and clinical response in solid cancer patients treated with andi-PD-1 antibody
- Author
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Nomura, M., Nagatomo, R., Inoue, K., Doi, K., Shimizu, J., Baba, K., Saito, T., Matsumoto, S., and Muto, M.
- Published
- 2019
- Full Text
- View/download PDF
4. Lipid Peroxide Overcomes the Inability of Platelet Secretory Phospholipase A2 to Hydrolyze Membrane Phospholipids in Rabbit Platelets
- Author
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Akiba, S., primary, Nagatomo, R., additional, Hayama, M., additional, and Sato, T., additional
- Published
- 1997
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5. Anomalous Oscillation Modes of Superfluid Pendant Droplets.
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Onodera K, Nagatomo R, Miyake K, Yamane R, Takamatsu S, Aoki Y, and Nomura R
- Abstract
Droplets should exhibit various dynamical phenomena when adhered to a surface; not all of them are realized in classical fluids. Visualization of superfluid ^{4}He pendant droplets revealed that the droplets were horizontally translated on a flat surface, bouncing off at the corner, known as the Noether mode that reflects the translation symmetry. The droplets exhibited another mode in vertical oscillations with high amplitude that included oscillation of the droplet edge. The oscillation period remained constant even as the droplets grew, exhibiting an anomalously weak size dependence. The high mobility of the droplet edges owing to the superfluidity was a crucial factor for the appearance of these anomalous modes.
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- 2024
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6. Soluble form of Lingo2, an autism spectrum disorder-associated molecule, functions as an excitatory synapse organizer in neurons.
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Yoshida F, Nagatomo R, Utsunomiya S, Kimura M, Shun S, Kono R, Kato Y, Nao Y, Maeda K, Koyama R, Ikegaya Y, Lichtenthaler SF, Takatori S, Takemoto H, Ogawa K, Ito G, and Tomita T
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- Animals, Female, Humans, Mice, ADAM10 Protein metabolism, Excitatory Postsynaptic Potentials drug effects, Mice, Inbred C57BL, Valproic Acid pharmacology, Autism Spectrum Disorder metabolism, Disease Models, Animal, Membrane Proteins metabolism, Nerve Tissue Proteins metabolism, Neurons metabolism, Neurons drug effects, Synapses metabolism
- Abstract
Autism Spectrum Disorder (ASD) is a developmental disorder characterized by impaired social communication and repetitive behaviors. In recent years, a pharmacological mouse model of ASD involving maternal administration of valproic acid (VPA) has become widely used. Newborn pups in this model show an abnormal balance between excitatory and inhibitory (E/I) signaling in neurons and exhibit ASD-like behavior. However, the molecular basis of this model and its implications for the pathogenesis of ASD in humans remain unknown. Using quantitative secretome analysis, we found that the level of leucine-rich repeat and immunoglobulin domain-containing protein 2 (Lingo2) was upregulated in the conditioned medium of VPA model neurons. This upregulation was associated with excitatory synaptic organizer activity. The secreted form of the extracellular domain of Lingo2 (sLingo2) is produced by the transmembrane metalloprotease ADAM10 through proteolytic processing. sLingo2 was found to induce the formation of excitatory synapses in both mouse and human neurons, and treatment with sLingo2 resulted in an increased frequency of miniature excitatory postsynaptic currents in human neurons. These findings suggest that sLingo2 is an excitatory synapse organizer involved in ASD, and further understanding of the mechanisms by which sLingo2 induces excitatory synaptogenesis is expected to advance our understanding of the pathogenesis of ASD., (© 2024. The Author(s).)
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- 2024
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7. Comparison of 3-nitrophenylhydrazine, O-benzyl hydroxylamine, and 2-picolylamine derivatizations for analysis of short-chain fatty acids through liquid chromatography coupled with tandem mass spectrometry.
- Author
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Nagatomo R, Ichikawa A, Kaneko H, and Inoue K
- Abstract
Short-chain fatty acids (SCFAs) are metabolites derived from gut microbiota and implicated in host homeostasis. Hence, the profiling SCFAs from biological samples plays an important role in revealing the interaction between gut microbiota and pathogens. Previous studies, liquid chromatography-tandem mass spectrometry (LC-MS/MS) combined with various derivatization strategies have been performed to obtain the SCFA profiles from biological samples. However, it is poor evidence to compare these derivatization regents and conditions. Thus, we present the evaluation of three major derivatization reagents, namely 3-nitrophenylhydrazine (3-NPH), O-benzylhydroxylamine (O-BHA), and 2-picolylamine (2-PA), for the analysis of eight SCFAs classified as C2-C5 isomers using LC-MS/MS. First, in a reversed-phase LC separation, 3-NPH showed good retention capacity. Although O-BHA derivatization showed higher sensitivity and good retention capacity than 2-PA, only 2-PA derivatization could successfully separate eight SCFAs. The matrix effects in human serum ranged 77.1-99.0% (RSD ≤ 3.4%, n = 6) for 3-NPH derivatives, 91.0-94.6% (RSD ≤ 5.4%, n = 6) for O-BHA derivatives, 81.6-99.5% (RSD ≤ 8.0%, n = 6) for 2-PA derivatives. These compared results showed each characteristic of 3-NPH, O-BHA, and 2-PA for SCFA derivatization based on LC-MS/MS approaches., (© 2023. The Author(s), under exclusive licence to The Japan Society for Analytical Chemistry.)
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- 2024
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8. [A case of myofibrillary myopathy due to Bcl2-Associated Athanogene 3 (BAG3) mutation complicated by peripheral neuropathy].
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Nagatomo R, Higuchi Y, Takei J, Nakamura T, Hashiguchi H, and Takashima H
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- Female, Infant, Newborn, Humans, Child, Adolescent, Young Adult, Adult, Apoptosis Regulatory Proteins genetics, Apoptosis Regulatory Proteins metabolism, Muscle, Skeletal pathology, Mutation, Adaptor Proteins, Signal Transducing genetics, Adaptor Proteins, Signal Transducing metabolism, Muscular Diseases pathology, Peripheral Nervous System Diseases genetics, Peripheral Nervous System Diseases pathology
- Abstract
A 19-year-old female, normal at birth, grew up without neck movement when getting up. She needed a handrail to climb stairs since the age of 10 years old, and walked slowly since the age of 16 years old. Neurological examination revealed loss of deep tendon reflexes, decreased vibratory sensation, weakness of distal muscles of the lower extremities, and weakness of mainly cervical trunk muscles suspected to be due to myopathy. Nerve conduction studies suggested axonal polyneuropathy, and needle EMG showed short duration MUP, myotonic discharge, and rimmed vacuoles on muscle biopsy. Genetic analysis revealed a previously reported pathological mutation (p.P209L, heterozygous) in Bcl2-Associated Athanogene 3 (BAG3), and a diagnosis of MFM6 was made. P209L is a poor prognosis myopathy that develops in childhood and is associated with cardiomyopathy. P209L is a solitary myopathy associated with axonal neuropathy and characterized by apex foot contracture and weak neck to trunk flexion. This disease is suspected in young-onset neuromyopathy.
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- 2023
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9. Sustainable chromatographic purification of milbemectin: Application of high-speed countercurrent chromatography coupled with off-line atmospheric pressure solid analysis probe-high resolution mass spectrometry.
- Author
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Terajima Y, Nagatomo R, Nunome M, Harada S, and Inoue K
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- Mass Spectrometry, Solvents chemistry, Chromatography, High Pressure Liquid methods, Countercurrent Distribution methods, Anti-Bacterial Agents
- Abstract
Isolation of valuable chemicals is an important process in reagent manufacturing for the pharmaceutical and food science industries. This process is traditionally time-consuming, expensive, and consumes vast amounts of organic solvents. Considering green chemistry and sustainability concerns, we sought to develop a sustainable chromatographic purification methodology for obtaining antibiotics by focusing on the reduction of organic solvent waste generation. Milbemectin (mixture of milbemycin A3 and milbemycin A4) was successfully purified using high-speed countercurrent chromatography (HSCCC) and pure fractions (>98% purity, HPLC) could be identified using the organic solvent fee atmospheric pressure solid analysis probe mass spectrometry (ASAP-MS). The organic solvents required for HSCCC could be redistilled and recycled for continued HSCCC purification, thus reducing the consumption of organic solvent (n-hexane/ethyl acetate) by 80+%. Optimization of the two-phase solvent system (n-hexane/ethyl acetate/methanol/water, 9/1/7/3, v/v/v/v) for HSCCC was assisted computationally, thereby reducing solvent waste from an experimental determination. Our proposal application of HSCCC and offline ASAP-MS provides proof of concept for a sustainable, preparative scale, chromatographic purification methodology for obtaining antibiotics in high purity., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2023
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10. Short-chain fatty acids profiling in biological samples from a mouse model of Sjögren's syndrome based on derivatized LC-MS/MS assay.
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Nagatomo R, Kaneko H, Kamatsuki S, Ichimura-Shimizu M, Ishimaru N, Tsuneyama K, and Inoue K
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- Animals, Chromatography, Liquid methods, Disease Models, Animal, Fatty Acids, Volatile analysis, Feces chemistry, Hemiterpenes, Isobutyrates analysis, Mice, Pentanoic Acids, Propionates analysis, Sjogren's Syndrome, Tandem Mass Spectrometry methods
- Abstract
An analytical platform is required to characterize the short-chain fatty acids (SCFAs) in a mouse model of pathological immune conditions. Therefore, liquid chromatography tandem mass spectrometry combined with 2-picolylamine derivatization and a comprehensive study of SCFAs distribution based on serum, saliva, feces, liver, and brain from a mouse model of Sjögren's syndrome (SS) is performed. The design of experiments is used to achieve efficient 2-picolylamine derivatization, and optimize the reaction conditions. Twelve SCFAs are derivatized, and separated on a reversed-phase C
18 column. All SCFAs show high linearity (r2 > 0.995) and intra/inter-day accuracy values from 71.6% to 115.6% (precision < 13.7%). This method was used to determine SCFAs concentrations in the serum, saliva, feces, liver, and brain of an SS model mice, and isobutyric acid, valeric acid, isovaleric acid, and 2-methylbutyric acid in liver from SS were significantly different compared with control group. Moreover, the preliminary evaluation of propionic acid, butyric acid, isobutyric acid, valeric acid, and isovaleric acid in saliva is conducted based on the respective SS stages and are correlated with these histological scores. This analytical platform for the widely SCFAs profiling in several tissues can be a clue for studying unclear immune pathophysiology., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)- Published
- 2022
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11. Experimental design of a stable isotope labeling derivatized UHPLC-MS/MS method for the detection/quantification of primary/secondary bile acids in biofluids.
- Author
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Muguruma Y, Nagatomo R, Kamatsuki S, Miyabe K, Asano G, Akatsu H, and Inoue K
- Subjects
- Chromatography, High Pressure Liquid, Humans, Isotope Labeling, Research Design, Bile Acids and Salts, Tandem Mass Spectrometry
- Abstract
An efficient analytical platform is required to characterize the human metabolome in pathology. For this purpose, ultra-high performance liquid chromatography with tandem mass spectrometry (UHPLC-MS/MS) combined with chemical derivatization stands out as one of the most powerful techniques. A targeted metabolomics platform for 11 bile acids (BAs) profiling in human serum and bile samples using a stable isotope labeling derivatization (SILD) was applied. For SILD, the design of experiments (DoE) was employed to optimize the reaction conditions such five factors in three levels. The sample preparation built upon a liquid-liquid extraction requiring small volumes (20 μL). In application, the relation between the BA and short-chain fatty acid levels in human serum and bile samples from patients with bile duct diseases were investigated. The proposed method offers significant utility in the large-scale biological analyses of hepato-biliary-pancreatic-related diseases., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Published by Elsevier B.V.)
- Published
- 2022
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12. Verification of the Impact of Blood Glucose Level on Liver Carcinogenesis and the Efficacy of a Dietary Intervention in a Spontaneous Metabolic Syndrome Model.
- Author
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Ichimura-Shimizu M, Kageyama T, Oya T, Ogawa H, Matsumoto M, Sumida S, Kakimoto T, Miyakami Y, Nagatomo R, Inoue K, Cheng C, and Tsuneyama K
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- Animals, Diabetes Mellitus, Type 2 blood, Diabetes Mellitus, Type 2 diet therapy, Diabetes Mellitus, Type 2 metabolism, Diabetes Mellitus, Type 2 pathology, Disease Models, Animal, Liver Neoplasms metabolism, Liver Neoplasms pathology, Male, Metabolic Syndrome metabolism, Metabolic Syndrome pathology, Mice, Mice, Obese, Non-alcoholic Fatty Liver Disease blood, Non-alcoholic Fatty Liver Disease diet therapy, Non-alcoholic Fatty Liver Disease metabolism, Non-alcoholic Fatty Liver Disease pathology, Obesity blood, Oligosaccharides pharmacology, Blood Glucose metabolism, Liver Neoplasms blood, Metabolic Syndrome blood, Metabolic Syndrome diet therapy
- Abstract
Metabolic syndrome (MS) is a risk factor for type 2 diabetes mellitus, vascular inflammation, atherosclerosis, and renal, liver, and heart diseases. Non-alcoholic steatohepatitis (NASH) is a progressive representative liver disease and may lead to the irreversible calamities of cirrhosis and hepatocellular carcinoma. Metabolic disorders such as hyperglycemia have been broadly reported to be related to hepatocarcinogenesis in NASH; however, direct evidence of a link between hyperglycemia and carcinogenesis is still lacking. Tsumura Suzuki Obese Diabetic (TSOD) mice spontaneously develop metabolic syndrome, including obesity, insulin resistance, and NASH-like liver phenotype, and eventually develop hepatocellular carcinomas. TSOD mice provide a spontaneous human MS-like model, even with significant individual variations. In this study, we monitored mice in terms of their changes in blood glucose levels, body weights, and pancreatic and liver lesions over time. As a result, liver carcinogenesis was delayed in non-hyperglycemic TSOD mice compared to hyperglycemic mice. Moreover, at the termination point of 40 weeks, liver tumors appeared in 18 of 24 (75%) hyperglycemic TSOD mice; in contrast, they only appeared in 5 of 24 (20.8%) non-hyperglycemic mice. Next, we investigated three kinds of oligosaccharide that could lower blood glucose levels in hyperglycemic TSOD mice. We monitored the levels of blood and urinary glucose and assessed pancreatic lesions among the experimental groups. As expected, significantly lower levels of blood and urinary glucose and smaller deletions of Langerhans cells were found in TSOD mice fed with milk-derived oligosaccharides (galactooligosaccharides and lactosucrose). At the age of 24 weeks, mild steatohepatitis was found in the liver but there was no evidence of liver carcinogenesis. Steatosis in the liver was alleviated in the milk-derived oligosaccharide-administered group. Taken together, suppressing the increase in blood glucose level from a young age prevented susceptible individuals from diabetes and the onset of NAFLD/NASH, as well as carcinogenesis. Milk-derived oligosaccharides showed a lowering effect on blood glucose levels, which may be expected to prevent liver carcinogenesis.
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- 2021
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13. Autism-associated variants of neuroligin 4X impair synaptogenic activity by various molecular mechanisms.
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Yumoto T, Kimura M, Nagatomo R, Sato T, Utsunomiya S, Aoki N, Kitaura M, Takahashi K, Takemoto H, Watanabe H, Okano H, Yoshida F, Nao Y, and Tomita T
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- Amino Acid Sequence, Animals, Cell Adhesion Molecules, Neuronal chemistry, Cell Adhesion Molecules, Neuronal metabolism, Cell Membrane metabolism, Cells, Cultured, Genetic Predisposition to Disease, HEK293 Cells, Humans, Induced Pluripotent Stem Cells metabolism, X-Linked Intellectual Disability genetics, Mice, Mutation, Missense genetics, Neurons metabolism, Organogenesis, Rats, Wistar, Autistic Disorder genetics, Cell Adhesion Molecules, Neuronal genetics, Mutation genetics, Synapses pathology
- Abstract
Background: Several genetic alterations, including point mutations and copy number variations in NLGN genes, have been associated with psychiatric disorders, such as autism spectrum disorder (ASD) and X-linked mental retardation (XLMR). NLGN genes encode neuroligin (NL) proteins, which are adhesion molecules that are important for proper synaptic formation and maturation. Previously, we and others found that the expression level of murine NL1 is regulated by proteolytic processing in a synaptic activity-dependent manner., Methods: In this study, we analyzed the effects of missense variants associated with ASD and XLMR on the metabolism and function of NL4X, a protein which is encoded by the NLGN4X gene and is expressed only in humans, using cultured cells, primary neurons from rodents, and human induced pluripotent stem cell-derived neurons., Results: NL4X was found to undergo proteolytic processing in human neuronal cells. Almost all NL4X variants caused a substantial decrease in the levels of mature NL4X and its synaptogenic activity in a heterologous culture system. Intriguingly, the L593F variant of NL4X accelerated the proteolysis of mature NL4X proteins located on the cell surface. In contrast, other variants decreased the cell-surface trafficking of NL4X. Notably, protease inhibitors as well as chemical chaperones rescued the expression of mature NL4X., Limitations: Our study did not reveal whether these dysfunctional phenotypes occurred in individuals carrying NLGN4X variant. Moreover, though these pathological mechanisms could be exploited as potential drug targets for ASD, it remains unclear whether these compounds would have beneficial effects on ASD model animals and patients., Conclusions: These data suggest that reduced amounts of the functional NL4X protein on the cell surface is a common mechanism by which point mutants of the NL4X protein cause psychiatric disorders, although different molecular mechanisms are thought to be involved. Furthermore, these results highlight that the precision medicine approach based on genetic and cell biological analyses is important for the development of therapeutics for psychiatric disorders.
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- 2020
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14. Association of Short-Chain Fatty Acids in the Gut Microbiome With Clinical Response to Treatment With Nivolumab or Pembrolizumab in Patients With Solid Cancer Tumors.
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Nomura M, Nagatomo R, Doi K, Shimizu J, Baba K, Saito T, Matsumoto S, Inoue K, and Muto M
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- Adult, Aged, Aged, 80 and over, Antineoplastic Agents, Immunological therapeutic use, Fatty Acids, Volatile analysis, Female, Humans, Japan, Male, Middle Aged, Prospective Studies, Antibodies, Monoclonal, Humanized adverse effects, Antibodies, Monoclonal, Humanized therapeutic use, Antineoplastic Agents, Immunological adverse effects, Gastrointestinal Microbiome drug effects, Neoplasms drug therapy, Nivolumab adverse effects, Nivolumab therapeutic use
- Abstract
Importance: Immunotherapy using immune checkpoint inhibitors has been remarkably effective for treating multiple cancer types, and the gut microbiome is a possible factor affecting immune checkpoint inhibitor efficacy. However, the association between the gut microbiome and immune status of the tumor microenvironment remains unclear. Short-chain fatty acids (SCFAs) are major end product metabolites produced by the gut microbiota and have wide-ranging impacts on host physiology., Objective: To evaluate fecal and plasma SCFAs in patients with solid cancer tumors treated with programmed cell death-1 inhibitors (PD-1i)., Design, Setting, and Participants: This was a prospective cohort biomarker study of patients with cancer who planned therapy with PD-1i at Kyoto University Hospital between July 2016 and February 2019. Data were analyzed from October 2019 to February 2020., Exposures: Patients who were treated with nivolumab or pembrolizumab were classified into 2 groups based on their treatment response using Response Evaluation Criteria in Solid Tumors version 1.1: responders who achieved an objective response and nonresponders. Dietary information in terms of intake frequency was obtained. Concentrations of SCFAs in fecal and plasma samples collected before PD-1i administration were measured using ultra-high-performance liquid chromatography coupled with tandem mass spectrometry., Main Outcomes and Measures: The concentration of SCFAs and progression-free survival., Results: Among 52 patients enrolled, the median (range) patient age was 67 (27-84) years, and 23 (44%) were women. Median (range) duration of follow-up of the survivors after administration of PD-1i was 2.0 (0.4-4.1) years. The overall response rate was 28.8%. High concentrations of some SCFAs were associated with longer progression-free survival. These included fecal acetic acid (hazard ratio [HR], 0.29; 95% CI, 0.15-0.54), propionic acid (HR, 0.08; 95% CI, 0.03-0.20), butyric acid (HR, 0.31; 95% CI, 0.16-0.60), valeric acid (HR, 0.53; 95% CI, 0.29-0.98), and plasma isovaleric acid (HR, 0.38; 95% CI, 0.14-0.99)., Conclusions and Relevance: Results of this study suggest that fecal SCFA concentrations may associated with PD-1i efficacy; thus, SCFAs may be the link between the gut microbiota and PD-1i efficacy. Because fecal examinations are completely noninvasive, they may be applicable for routine monitoring of patients.
- Published
- 2020
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15. Effect of Sympatholytic Therapy on Circadian Cardiac Autonomic Activity in Non-Diabetic Chronic Kidney Disease.
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Makimoto H, Shimizu K, Fujiu K, Lin T, Oshima T, Amiya E, Yamagata K, Kojima T, Daimon M, Nagatomo R, Waki K, Meyer C, and Komuro I
- Subjects
- Adrenergic alpha-Antagonists therapeutic use, Adrenergic beta-Antagonists therapeutic use, Adult, Aged, Case-Control Studies, Female, Humans, Male, Middle Aged, Multivariate Analysis, Renal Insufficiency, Chronic physiopathology, Retrospective Studies, Sympatholytics therapeutic use, Adrenergic alpha-Antagonists pharmacology, Adrenergic beta-Antagonists pharmacology, Autonomic Nervous System drug effects, Heart Rate drug effects, Renal Insufficiency, Chronic drug therapy, Sympatholytics pharmacology, Vagus Nerve drug effects
- Abstract
Although beta-blockade itself is not a first choice for chronic kidney disease (CKD) patients, alpha-beta-blockers (ABB) do improve their prognoses. This study's aim was to evaluate the effect of beta-selective-blockers (BSB) and ABB on circadian cardiac autonomic activity in CKD patients.The study consisted of 496 non-diabetic individuals who underwent 24-hour Holter monitoring (149 CKD patients and 347 controls without CKD). Using heart rate variability analysis, we evaluated the proportion of NN50 and the high-frequency component (reflecting parasympathetic activity), and low- to high-frequency ratio (reflecting sympathovagal balance). These indices were evaluated by regression analysis incorporating gender, age, related comorbidities, and medications. BSB increased vagal activity only in the day-time and not the night-time in controls. In CKD patients, BSB was significantly related to higher vagal activity throughout the day and with lower sympathovagal balance at night. The night sympathovagal balance of CKD patients taking ABB was significantly higher than that of CKD patients taking BSB, which was the only significant difference between the effects of BSB and ABB.The sympatholytic therapy effect is different depending on CKD presence and whether patients are treated with BSB or ABB. In CKD patients without severe heart failure, BSB could be associated with higher parasympathetic activity and lower sympathovagal balance compared to ABB.
- Published
- 2018
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16. Effect of coffee or coffee components on gut microbiome and short-chain fatty acids in a mouse model of metabolic syndrome.
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Nishitsuji K, Watanabe S, Xiao J, Nagatomo R, Ogawa H, Tsunematsu T, Umemoto H, Morimoto Y, Akatsu H, Inoue K, and Tsuneyama K
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- Animals, Caffeine administration & dosage, Caffeine chemistry, Chlorogenic Acid administration & dosage, Chlorogenic Acid chemistry, Disease Models, Animal, Dysbiosis physiopathology, Fatty Acids, Volatile chemistry, Gastrointestinal Microbiome drug effects, Humans, Inflammation physiopathology, Liver drug effects, Liver physiopathology, Metabolic Syndrome microbiology, Metabolic Syndrome physiopathology, Mice, Mice, Obese, Obesity diet therapy, Obesity physiopathology, Coffee chemistry, Dysbiosis diet therapy, Fatty Acids, Volatile metabolism, Inflammation diet therapy, Metabolic Syndrome diet therapy
- Abstract
We previously showed that male Tsumura Suzuki obese diabetes (TSOD) mice, a spontaneous mouse model of metabolic syndrome, manifested gut dysbiosis and subsequent disruption of the type and quantity of plasma short-chain fatty acids (SCFAs), and daily coffee intake prevented nonalcoholic steatohepatitis in this mouse model. Here, we present a preliminary study on whether coffee and its major components, caffeine and chlorogenic acid, would affect the gut dysbiosis and the disrupted plasma SCFA profile of TSOD mice, which could lead to improvement in the liver pathology of these mice. Three mice per group were used. Daily intake of coffee or its components for 16 wk prevented liver lobular inflammation without improving obesity in TSOD mice. Coffee and its components did not repair the altered levels of Gram-positive and Gram-negative bacteria and an increased abundance of Firmicutes in TSOD mice but rather caused additional changes in bacteria in six genera. However, caffeine and chlorogenic acid partially improved the disrupted plasma SCFA profile in TSOD mice, although coffee had no effects. Whether these alterations in the gut microbiome and the plasma SCFA profile might affect the liver pathology of TSOD mice may deserve further investigation.
- Published
- 2018
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17. Application of 2-Picolylamine Derivatized Ultra-high Performance Liquid Chromatography Tandem Mass Spectrometry for the Determination of Short-chain Fatty Acids in Feces Samples.
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Nagatomo R, Okada Y, Ichimura M, Tsuneyama K, and Inoue K
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- Analytic Sample Preparation Methods, Animals, Fatty Acids, Volatile chemistry, Mice, Chromatography, High Pressure Liquid methods, Fatty Acids, Volatile analysis, Feces chemistry, Tandem Mass Spectrometry methods
- Abstract
We present a sensitive and selective method for the simultaneous determination of short-chain fatty acids (SCFAs), such as acetic acid (AA), propionic acid, butyric acid (BA), isobutyric acid, valeric acid, isovaleric acid, hydroangelic acid, caproic acid, 4-methylvaleric acid and succinic acid (SA) in feces samples using a ultra-high performance liquid-chromatography tandem mass spectrometry (UHPLC-MS/MS) with simple derivatization of 2-picolylamine. The main SFCAs were derivatized in the same condition, and showed the specific product ion (m/z 109) in the electrospray positive mode regarding to 2-picolylamine. The derivatized SA showed a different pattern of the product ion (m/z 191). The derivatized analytes showed LOD < 75 nM, LOQ < 100 nM and r
2 in the calibration curve > 0.991. The QuEChERS was used for sample preparation of feces samples. In the recovery test, the recovery values appeared from 89.7 to 100.2% (RSD: 2.1 to 9.2%, n = 6). This developed method was applied to evaluate obese diabetes model mice. In the result, the branched-chain SCFAs levels in feces from model mice of spontaneous obese type II diabetes were on a declining trend compared with normal. The AA levels from model mice with high-calorie/fat diet are owed a declining trend for 3 to 9 months. The BA levels showed that normal mice were increasing, and model mice had decreased tendency for breeding months. High-calorie/fat diet showed that the SA levels increased.- Published
- 2018
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18. Analysis of the gut microbiome and plasma short-chain fatty acid profiles in a spontaneous mouse model of metabolic syndrome.
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Nishitsuji K, Xiao J, Nagatomo R, Umemoto H, Morimoto Y, Akatsu H, Inoue K, and Tsuneyama K
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- Animals, Bacteroidetes genetics, Bacteroidetes metabolism, Diabetes Mellitus microbiology, Diabetes Mellitus pathology, Disease Models, Animal, Dysbiosis blood, Dysbiosis genetics, Dysbiosis microbiology, Fatty Acids, Volatile genetics, Humans, Metabolic Syndrome blood, Metabolic Syndrome microbiology, Mice, Mice, Obese, Obesity blood, Obesity genetics, Obesity microbiology, Diabetes Mellitus genetics, Fatty Acids, Volatile blood, Gastrointestinal Microbiome genetics, Metabolic Syndrome genetics
- Abstract
Male Tsumura Suzuki obese diabetes (TSOD) mice spontaneously develop obesity and obesity-related metabolic syndrome. Gut dysbiosis, an imbalance of gut microbiota, has been implicated in the pathogenesis of metabolic syndrome, but its mechanisms are unknown. Short-chain fatty acids (SCFAs) are the main fermentation products of gut microbiota and a link between the gut microbiota and the host's physiology. Here, we investigated a correlation among gut dysbiosis, SCFAs, and metabolic syndrome in TSOD mice. We detected enriched levels of Gram-positive bacteria and corresponding decreases in Gram-negative bacteria in 24-wk-old metabolic syndrome-affected TSOD mice compared with age-matched controls. The abundance of Bacteroidetes species decreased, the abundance of Firmicutes species increased, and nine genera of bacteria were altered in 24-wk-old TSOD mice. The total plasma SCFA level was significantly lower in the TSOD mice than in controls. The major plasma SCFA-acetate-decreased in TSOD mice, whereas propionate and butyrate increased. TSOD mice had no minor SCFAs (valerate and hexanoate) but normal mice did. We thus concluded that gut dysbiosis and consequent disruptions in plasma SCFA profiles occurred in metabolic syndrome-affected TSOD mice. We also propose that the TSOD mouse is a useful model to study gut dysbiosis, SCFAs, and metabolic syndrome.
- Published
- 2017
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19. [Performance and clinical evaluation of antinuclear antibody test based on fluorescence enzyme immunoassay].
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Watanabe N, Nagatomo R, Okubo S, Yokota H, Ikeda H, and Yatomi Y
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- Adult, Aged, Aged, 80 and over, Antibodies, Antinuclear immunology, Connective Tissue Diseases blood, Connective Tissue Diseases diagnosis, Connective Tissue Diseases immunology, Female, Humans, Male, Mass Screening methods, Middle Aged, Antibodies, Antinuclear blood, Fluoroimmunoassay methods, Immunoenzyme Techniques methods
- Abstract
Background: The measurement of antinuclear antibodies (ANA) is used for screening of connective tissue diseases (CTD) in the laboratory. ANA detection is performed by indirect immunofluorescence (IF) assay on HEp-2 cells from human larynx carcinoma. However, it lacks specificity for the identification of specific diseases and antigen reactivity. The aim of the present study was to evaluate the EliA CTD Screen (EliA), a new enzyme fluoroimmunoassay (Phadia AB, Uppsala, Sweden) for detection of ANA in human serum., Patients and Methods: The study involved a total of 732 serum samples, 200 from healthy donors, 297 from patients with CTD and 235 from patients with rheumatoid arthritis, vasculitis syndrome and relative disease of CTD. For all sera, ANA was measured by IF, commercial assay (MESACUP) and EliA., Result: The sensitivity and specificity of EliA were 73.7% and 78.7%, respectively, whereas those of MESACUP were 80.8% and 64.7%, respectively. Area under the receiver operating curves for EliA, MESACUP and IF were 0.821, 0.786 and 0.730, respectively. The concordance rate between EliA and MESACUP was 84.2%. These discrepancies between those 2 assays were found in 84 sera. Further investigation were done by each ANA antigen tests for the discrepant results of EliA in 83 sera. The discrepancies might be occurred by antigen difference or non-specific response., Conclusion: AUC results showed that the diagnostic performance of EliA was superior to MESACUP and IF. EliA had a good performance as method for screening of CTD.
- Published
- 2014
20. Increased activity of serum mitochondrial isoenzyme of creatine kinase in hepatocellular carcinoma patients predominantly with recurrence.
- Author
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Soroida Y, Ohkawa R, Nakagawa H, Satoh Y, Yoshida H, Kinoshita H, Tateishi R, Masuzaki R, Enooku K, Shiina S, Sato T, Obi S, Hoshino T, Nagatomo R, Okubo S, Yokota H, Koike K, Yatomi Y, and Ikeda H
- Subjects
- Aged, Biomarkers blood, Creatine Kinase, Mitochondrial Form genetics, Female, Humans, Male, Middle Aged, Protein Precursors blood, Prothrombin, RNA, Messenger analysis, alpha-Fetoproteins analysis, Carcinoma, Hepatocellular enzymology, Creatine Kinase, Mitochondrial Form blood, Isoenzymes blood, Liver Neoplasms enzymology, Neoplasm Recurrence, Local enzymology
- Abstract
Background & Aims: Mitochondrial isoenzyme of creatine kinase (MtCK) is reportedly highly expressed in hepatocellular carcinoma (HCC). Clinical relevance of serum MtCK activity in patients with HCC was assessed using a novel immuno-inhibition method., Methods: Among patients with cirrhosis caused by hepatitis B or C virus, 147 patients with HCC (12 with the first occurrence and 135 with recurrence) and 92 patients without HCC were enrolled., Results: Serum MtCK activity was higher in cirrhotic patients with HCC than in those without HCC or healthy subjects. Elevated serum MtCK activity in HCC patients decreased after radiofrequency ablation. In case of prediction of HCC, MtCK had a sensitivity of 62.6% and a specificity of 70.7% at a cut-off point of 8.0 U/L, with an area under the receiver operating curve of 0.722 vs. 0.713 for alpha-fetoprotein (AFP) and 0.764 for des-gamma-carboxy prothrombin (DCP). Among the HCC patients, serum MtCK activity was elevated in 52.9% individuals with serum AFP level < 20 ng/ml and 63.2% individuals with serum DCP level < 40 mAu/ml. Even in patients with a single HCC ≤ 2 cm, the sensitivity of serum MtCK activity for the prediction of HCC was 64.4%, which was comparable to the overall sensitivity. This increased activity was due to an increase in ubiquitous MtCK, not sarcomeric MtCK, and the enhanced mRNA expression of ubiquitous MtCK was observed in cell lines originating from HCCs in contrast to healthy liver tissues., Conclusions: Serum MtCK activity merits consideration as a novel marker for HCC to be further tested as for its diagnostic and prognostic power., (Copyright © 2012 European Association for the Study of the Liver. Published by Elsevier B.V. All rights reserved.)
- Published
- 2012
- Full Text
- View/download PDF
21. [The performance of the automated immune chemiluminescent system "IMMULITE 2000XPi for the measurement of serum soluble IL-2 receptor in clinical samples].
- Author
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Watanabe N, Nagatomo R, Okubo S, Yokota H, Masuda A, Ikeda H, and Yatomi Y
- Subjects
- Autoimmune Diseases immunology, Humans, Lymphoma, Non-Hodgkin immunology, Receptors, Interleukin-2 immunology, Reproducibility of Results, Sensitivity and Specificity, Solubility, Autoimmune Diseases blood, Automation, Laboratory methods, Biomarkers, Tumor blood, Immunoassay methods, Luminescent Measurements methods, Lymphoma, Non-Hodgkin blood, Receptors, Interleukin-2 blood
- Abstract
The performance of a chemical luminescence test reagent "Immulyze IL-2R II" with an automated immune chemiluminescent system "IMMULITE 2000XPi" for the measurement of serum soluble IL-2 receptor in clinical samples was investigated. The satisfactory results were obtained for the reproducibility, precision, linearity, and sensitivity, and no interference with hemolysis, bilirubin, chyle or intrafat was observed. A significant correlation was found between the values of sIL-2R measured by the Cell-free N IL-2R and those obtained by the IMMULYZE IL-2R II. The measurements were stable regardless of the methods of sample preservation, or repeated freeze-thawing procedures. Elevated concentrations of sIL-2R over 1,000 U/mL were found in multiple types of collagen diseases or severe cases of allergic diseases, indicative that sIL-2R levels might correlate with the severity of autoimmune diseases. In patients with lymphoma, sIL-2R levels correlated with the lactate dehydrogenase (LD) activity. Among the lymphoma cases with sIL-2R levels over 1,000 U/mL, the majority (84%) had significantly higher levels of LD, and among them, 81% were at the clinical stage IV. We observed that sIL-2R levels increased from the early stages of lymphoma, while LD activities increased at the advanced stages. Our present findings suggest that sIL-2R is a promising marker for the diagnosis of autoimmune and allergic diseases, and also for the diagnosis and staging of lymphomas.
- Published
- 2012
22. [Questionnaire survey of the POCT device antsense ROSE for blood glucose analysis on healthcare professionals--evaluation focused on preventive measures against cross-infections].
- Author
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Nagatomo R, Kaneko M, Yuasa K, Ono Y, Kanno N, Ueki K, Kadowaki T, and Yatomi Y
- Subjects
- Humans, Risk Management methods, Blood Glucose analysis, Blood Glucose Self-Monitoring instrumentation, Blood Specimen Collection instrumentation, Cross Infection prevention & control, Health Personnel, Infection Control instrumentation, Point-of-Care Systems, Surveys and Questionnaires
- Abstract
Considering the possibility of being used for any patients, such a risk-managed medical device is necessary in the perspective of the prevention of hospital infections. Antsense ROSE, a newly developed POCT (Point of Care Testing) diagnostic device for blood glucose analysis, is designed for safety in hospital use. Use of a disposable chip filter for blood sampling prevents cross-infection through device. As to infection control, we carried out a questionnaire survey of healthcare professionals specialists in diabetes to evaluate the feasibility of this device in clinical practice. Despite the infection control system of this device, the survey participants pointed out only a little improvement in infection risk compared with conventional methods. Some were concerned about the cross-infection because blood sampling itself increases the risk of infection, and because it is difficult for examiners to prevent infections completely due to handling blood samples. Systems ensuring safety, such as a fail-safe, are essential for in-hospital use to prevent hospital infections due to the possibility of using a device for several patients, and to ensure the security even for wrong operations. Further investigations, developments and educational campaign will be required for the use of risk managed devices against in-hospital infections.
- Published
- 2011
23. [Evaluation of latex agglutination test for anti-treponemal antibody in comparison with chemical luminescence tests].
- Author
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Watanabe N, Nagatomo R, Okubo S, Yokota H, Ikeda H, and Yatomi Y
- Subjects
- False Positive Reactions, Humans, Luminescent Measurements, Syphilis Serodiagnosis methods, Antibodies, Bacterial analysis, Latex Fixation Tests, Treponema immunology
- Abstract
The performance of a latex agglutination test (Mediace TPLA) in the detection of anti-treponemal antibody was evaluated in comparison with chemical luminescence tests (LumipulsII-N and Architect TPAb) in 346 cases. Anti-treponemal antibody was further determined by immunochromatography and immunoblotting tests and additionally evaluated by a serological test for syphilis with lipoidal antigens. The total concordance rate between the latex agglutination test and chemical luminescence tests ranged from 96% to 97%: the positive concordance rate ranged from 96% to 97%, and the negative concordance rate, from 97% to 98%. The latex agglutination test showed two false positive cases, and each chemical luminescence test showed two false positive cases, respectively. In eight cases, only the latex agglutination test showed negative results; all specimens contained anti-treponemal antibodies. However, none of these was considered to be a false positive and each was treated as syphilis based on the results of confirmatory analysis with immunochromatography and immunoblotting tests and a serological test for syphilis. The discordant results in the latex agglutination test and chemical luminescence tests may be caused by the different antigenisity of each test. With detailed analysis of those sera treated as syphilis, each specimen was found to contain various antibodies against syphilitic antigens, suggesting that there was a different specificity of native and recombinant antigens. Based on the present results for the comparison between the latex agglutination test and chemical luminescence tests, it was considered that further investigation is necessary to clarify the anti-treponemal antibody profile of syphilis at the disease stage.
- Published
- 2011
24. [The comparison study between UniCAP EliA and former kit for measuring the autoantibodies].
- Author
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Nagatomo R, Watanabe N, Okubo S, Yokota H, Ikeda H, and Yatomi Y
- Subjects
- Enzyme-Linked Immunosorbent Assay, Humans, Reproducibility of Results, Autoantibodies blood, Immunoenzyme Techniques instrumentation
- Abstract
Measurements of autoantibodies are served for diagnosis of autoimmune diseases in routine. Results of UniCAP EliA (Phadia), based on fluorescence-enzyme immunoassay, were compared to those of the current ELISA method, MESACUP DNA-II test [ds] and MESACUP-2 test (MBL) with total of 404 sera. The full automated instrument of UniCAP 250 was used for measurement of UniCAP EliA. The CVs of within day reproducibility (n=10) were 3.0-9.6% by UniCAP EliA, meanwhile 1.7-11.7% by MESACUP. The CVs of between day reproducibility(5 days) were 1.0-11.8% by UniCAP EliA, meanwhile 1.0-19.9% by MESACUP. The concordance of U1RNP, SS-A/Ro, SS-B/La, Scl-70 and Jo-1 between UniCAP EliA and MESACUP were 89.5-100%, but the positive concordance in dsDNA, Sm andJo-1 showed lower concordance percentage (40.0-62.9%). UniCAP EliA had better reproducibility than MESACUP. Some sera showed discrepant results between UniCAP EliA and MESACUP. These discrepancies might be occurred by the purification of antigens or different measurement principle of kits. The antigens' purification of UniCAP EliA seemed enough for the routine tests, and the results from UniCAP EliA would give high clinical importance.
- Published
- 2011
25. Disruption of ins-11, a Caenorhabditis elegans insulin-like gene, and phenotypic analyses of the gene-disrupted animal.
- Author
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Kawano T, Nagatomo R, Kimura Y, Gengyo-Ando K, and Mitani S
- Subjects
- Animals, Base Sequence, DNA Primers, DNA, Complementary, Phenotype, RNA Interference, Caenorhabditis elegans genetics, Insulin genetics
- Abstract
The insulin/insulin-like growth factor-I signaling (IIS) pathway regulates larval diapause, adult lifespan, fat metabolism, and stress-resistance in the nematode Caenorhabditis elegans. One of 38 C. elegans insulin-like genes, ins-11, was disrupted and phenotypic analyses of the gene-disrupted animal were performed. The gene-disruption exhibited a significant influence on the adult lifespan. It antagonized the lifespan extension induced by RNAi knockdown of another insulin-like gene, ins-7. Hence ins-11 appears to be necessary for lifespan extension caused by a decrease in the IIS pathway. This is the first description of gene-disruption of the C. elegans insulin-like gene that suppresses the lifespan extension.
- Published
- 2006
- Full Text
- View/download PDF
26. Stimulation of cytosolic phospholipase A2-catalyzed arachidonic acid liberation by low dose tert-butyl hydroperoxide without an influence on the enzyme activity in rabbit platelets.
- Author
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Akiba S, Nagatomo R, Hayama M, and Sato T
- Subjects
- Animals, Blood Platelets drug effects, Catalysis drug effects, Cytosol drug effects, Dose-Response Relationship, Drug, Drug Synergism, Enzyme Activation drug effects, Ferrous Compounds pharmacology, Oxidative Stress, Phospholipases A drug effects, Phospholipases A2, Platelet Activation drug effects, Rabbits, tert-Butylhydroperoxide, Arachidonic Acid blood, Blood Platelets enzymology, Cytosol enzymology, Peroxides pharmacology, Phospholipases A blood
- Abstract
The effect of lipid peroxide on the hydrolytic action of cytosolic phospholipase A2 (cPLA2) in rabbit platelets was investigated. Ionomycin-stimulated arachidonic acid liberation and lysophosphatidylcholine formation were significantly potentiated when platelets were pretreated with tert-butyl hydroperoxide (BHP) and FeSO4, and then washed. Under the conditions, oxidizing reagents did not enhance the increase in cPLA2 activity by ionomycin or the basal activity in unstimulated cells. Furthermore, the treatment of a platelet lysate with BHP and FeSO4 did not affect Ca(2+)-induced translocation of cPLA2 to the membranes. However, with a membrane fraction, arachidonic acid liberation catalyzed by the partially purified cPLA2 was synergistically enhanced by BHP and FeSO4. These results suggest that oxidative stress may potentiate the hydrolytic action of cPLA2 on membrane phospholipids without an influence on the processes leading to the enzyme activation.
- Published
- 1997
- Full Text
- View/download PDF
27. Effect of berbamine on cytosolic phospholipase A2 activation in rabbit platelets.
- Author
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Akiba S, Nagatomo R, Ishimoto T, and Sato T
- Subjects
- Aluminum Chloride, Aluminum Compounds pharmacology, Animals, Arachidonic Acid analysis, Blood Platelets enzymology, Calcium metabolism, Chlorides pharmacology, Enzyme Activation drug effects, In Vitro Techniques, Ionomycin pharmacology, Phospholipases A2, Rabbits, Sodium Fluoride pharmacology, Thrombin antagonists & inhibitors, Alkaloids pharmacology, Anti-Inflammatory Agents, Non-Steroidal pharmacology, Benzylisoquinolines, Blood Platelets drug effects, Phospholipases A metabolism
- Abstract
The effect of berbamine, a biscoclaurine alkaloid, on cytosolic phospholipase A2 activation in rabbit platelets was investigated. Berbamine inhibited arachidonic acid liberation induced by thrombin but not that by ionomycin. The alkaloid did not affect thrombin-stimulated Ca2+ mobilization. Ca(2+)-dependent translocation of cytosolic phospholipase A2 to membranes, or the activity of partially purified cytosolic phospholipase A2. Furthermore, berbamine had no effect on the thrombin-elicited increase in cytosolic phospholipase A2 activity. However, berbamine suppressed arachidonic acid liberation in platelets stimulated with GTP-binding protein activators. Although incubation of platelet membranes with a GTP analogue decreased the islet-activating protein-catalyzed ADP-ribosylation of an approximately 40 kDa protein in the membranes, pretreatment of the membranes with berbamine did not influence the decrease in ADP-ribosylation. These results suggest that berbamine may impair GTP-binding protein-mediated activation of cytosolic phospholipase A2, probably without influencing the enzyme translocation to membranes or the increase in the enzyme activity, and thus may cause the suppression of thrombin-induced arachidonic acid liberation.
- Published
- 1995
- Full Text
- View/download PDF
28. Determination of D-amino acids in serum from patients with renal dysfunction.
- Author
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Fukushima T, Santa T, Homma H, Nagatomo R, and Imai K
- Subjects
- Blood Urea Nitrogen, Chromatography, High Pressure Liquid, Creatinine blood, Humans, Kidney Diseases physiopathology, Amino Acids blood, Kidney Diseases blood
- Abstract
D-Ala and D-Ser were detected in the sera of both normal subjects and patients with renal dysfunction, and their concentrations were higher in the patients than in the normal subjects. A positive correlation between the concentration of D-Ala or D-Ser and that of creatinine (r = 0.733, p < 0.001 or r = 0.634, p < 0.001) or blood urea nitrogen (BUN) (r = 0.449, p < 0.05 or r = 0.629, p < 0.001) was observed in sera from 20 patients with renal dysfunction. The fraction (%D) of D-Ala in the total Ala in serum ([D/(D+L)] x 100) correlated well with the concentration of creatinine (r = 0.811, p < 0.001), suggesting that it is a candidate as a marker for renal proximal tubular dysfunction. The correlations of %D of Ser with creatinine and BUN levels were 0.796 (p < 0.001) and 0.919 (p < 0.001), respectively, indicating that %D of Ser may reflect protein turnover or catabolism in certain tissues as well as renal proximal tubular dysfunction.
- Published
- 1995
- Full Text
- View/download PDF
29. [Countermeasures and nursing care in malignant hyperthermia during the operation].
- Author
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Okamura M and Nagatomo R
- Subjects
- Humans, Hypothermia, Induced nursing, Malignant Hyperthermia therapy, Intraoperative Care, Malignant Hyperthermia nursing
- Published
- 1984
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