1. Progenitor identification and SARS-CoV-2 infection in human distal lung organoids
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Salahudeen, Ameen A., Choi, Shannon S., Rustagi, Arjun, Zhu, Junjie, van Unen, Vincent, de la O, Sean M., and Flynn, Ryan A.
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Diagnosis ,Physiological aspects ,Methods ,Human cell culture -- Methods ,Lung -- Physiological aspects ,COVID-19 -- Diagnosis ,Lungs -- Physiological aspects - Abstract
Author(s): Ameen A. Salahudeen [sup.1] [sup.19] , Shannon S. Choi [sup.1] , Arjun Rustagi [sup.2] , Junjie Zhu [sup.3] , Vincent van Unen [sup.4] [sup.5] , Sean M. de la [...], The distal lung contains terminal bronchioles and alveoli that facilitate gas exchange. Three-dimensional in vitro human distal lung culture systems would strongly facilitate the investigation of pathologies such as interstitial lung disease, cancer and coronavirus disease 2019 (COVID-19) pneumonia caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Here we describe the development of a long-term feeder-free, chemically defined culture system for distal lung progenitors as organoids derived from single adult human alveolar epithelial type II (AT2) or KRT5.sup.+ basal cells. AT2 organoids were able to differentiate into AT1 cells, and basal cell organoids developed lumens lined with differentiated club and ciliated cells. Single-cell analysis of KRT5.sup.+ cells in basal organoids revealed a distinct population of ITGA6.sup.+ITGB4.sup.+ mitotic cells, whose offspring further segregated into a TNFRSF12A.sup.hi subfraction that comprised about ten per cent of KRT5.sup.+ basal cells. This subpopulation formed clusters within terminal bronchioles and exhibited enriched clonogenic organoid growth activity. We created distal lung organoids with apical-out polarity to present ACE2 on the exposed external surface, facilitating infection of AT2 and basal cultures with SARS-CoV-2 and identifying club cells as a target population. This long-term, feeder-free culture of human distal lung organoids, coupled with single-cell analysis, identifies functional heterogeneity among basal cells and establishes a facile in vitro organoid model of human distal lung infections, including COVID-19-associated pneumonia. A long-term culture method for organoids derived from single adult human lung cells is used to identify progenitor cells and study SARS-CoV-2 infection.
- Published
- 2020
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