28 results on '"Kopperud R"'
Search Results
2. cAMP effector mechanisms. Novel twists for an “old” signaling system: SL03-016
- Author
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Kopperud, R., Krakstad, C., Selheim, F., and Dskeland, S. O.
- Published
- 2003
3. Search for new cyclic AMP-binding proteins
- Author
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Dremier, S., Kopperud, R., Doskeland, S.O., Dumont, J.E., and Maenhaut, C.
- Published
- 2003
- Full Text
- View/download PDF
4. Long-term consumption of an obesogenic high fat diet prior to ischemia-reperfusion mediates cardioprotection via Epac1-dependent signaling
- Author
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Edland, F., Wergeland, A., Kopperud, R., Åsrud, K. S., Hoivik, E. A., Witsø, S. L., Æsøy, R., Madsen, Lise, Kristiansen, Karsten, Bakke, M., Døskeland, S. O., Jonassen, A. K., Edland, F., Wergeland, A., Kopperud, R., Åsrud, K. S., Hoivik, E. A., Witsø, S. L., Æsøy, R., Madsen, Lise, Kristiansen, Karsten, Bakke, M., Døskeland, S. O., and Jonassen, A. K.
- Published
- 2016
5. Long-term consumption of an obesogenic high fat diet prior to ischemia-reperfusion mediates cardioprotection via Epac1-dependent signaling
- Author
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Edland, F., primary, Wergeland, A., additional, Kopperud, R., additional, Åsrud, K. S., additional, Hoivik, E. A., additional, Witsø, S. L., additional, Æsøy, R., additional, Madsen, L., additional, Kristiansen, K., additional, Bakke, M., additional, Døskeland, S. O., additional, and Jonassen, A. K., additional
- Published
- 2016
- Full Text
- View/download PDF
6. Increased microvascular permeability in mice lacking Epac1 (Rapgef3)
- Author
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Kopperud, R. K., primary, Rygh, C. Brekke, additional, Karlsen, T. V., additional, Krakstad, C., additional, Kleppe, R., additional, Hoivik, E. A., additional, Bakke, M., additional, Tenstad, O., additional, Selheim, F., additional, Lidén, Å., additional, Madsen, L., additional, Pavlin, T., additional, Taxt, T., additional, Kristiansen, K., additional, Curry, F.‐R. E., additional, Reed, R. K., additional, and Døskeland, S. O., additional
- Published
- 2016
- Full Text
- View/download PDF
7. Multimodal Imaging of Orthotopic Mouse Model of Endometrial Carcinoma
- Author
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Haldorsen, I.S., Popa, M., Fonnes, T., Brekke, N., Kopperud, R., Visser, N.C.M., Rygh, C.B., Pavlin, T., Salvesen, H.B., McCormack, E., Krakstad, C., Haldorsen, I.S., Popa, M., Fonnes, T., Brekke, N., Kopperud, R., Visser, N.C.M., Rygh, C.B., Pavlin, T., Salvesen, H.B., McCormack, E., and Krakstad, C.
- Abstract
Contains fulltext : 152502.pdf (publisher's version ) (Open Access), BACKGROUND: Orthotopic endometrial cancer models provide a unique tool for studies of tumour growth and metastatic spread. Novel preclinical imaging methods also have the potential to quantify functional tumour characteristics in vivo, with potential relevance for monitoring response to therapy. METHODS: After orthotopic injection with luc-expressing endometrial cancer cells, eleven mice developed disease detected by weekly bioluminescence imaging (BLI). In parallel the same mice underwent positron emission tomography-computed tomography (PET-CT) and magnetic resonance imaging (MRI) employing 18F-fluorodeoxyglocose (18F-FDG) or 18F- fluorothymidine (18F-FLT) and contrast reagent, respectively. The mice were sacrificed when moribund, and post-mortem examination included macroscopic and microscopic examination for validation of growth of primary uterine tumours and metastases. PET-CT was also performed on a patient derived model (PDX) generated from a patient with grade 3 endometrioid endometrial cancer. RESULTS: Increased BLI signal during tumour growth was accompanied by increasing metabolic tumour volume (MTV) and increasing MTV x mean standard uptake value of the tumour (SUVmean) in 18F-FDG and 18F-FLT PET-CT, and MRI conspicuously depicted the uterine tumour. At necropsy 82% (9/11) of the mice developed metastases detected by the applied imaging methods. 18F-FDG PET proved to be a good imaging method for detection of patient derived tumour tissue. CONCLUSIONS: We demonstrate that all imaging modalities enable monitoring of tumour growth and metastatic spread in an orthotopic mouse model of endometrial carcinoma. Both PET tracers, 18F-FDG and 18F-FLT, appear to be equally feasible for detecting tumour development and represent, together with MRI, promising imaging tools for monitoring of patient-derived xenograft (PDX) cancer models.
- Published
- 2015
8. Search for new cyclic AMP-binding proteins
- Author
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Dremier, Sarah, Kopperud, R, Doskeland, S. O., Dumont, Jacques Emile, Maenhaut, Carine, Dremier, Sarah, Kopperud, R, Doskeland, S. O., Dumont, Jacques Emile, and Maenhaut, Carine
- Abstract
Today, there is evidence that the cAMP-dependent kinases (PKA) are not the only intracellular receptors involved in intracellular cAMP signalling in eukaryotes. Other cAMP-binding proteins have been recently identified, including some cyclic nucleotide-gated channels and Epac (exchange protein directly activated by cAMP) proteins. All these proteins bind cAMP through conserved cyclic nucleotide monophosphate-binding domains. However, all putative cAMP-binding proteins having such domains, as revealed by computer analysis, do not necessarily bind cAMP, indicating that their presence is not a sufficient criteria to predict cAMP-binding property for a protein., Journal Article, Research Support, Non-U.S. Gov't, Review, SCOPUS: sh.j, info:eu-repo/semantics/published
- Published
- 2003
9. Fine organic aerosols collected in a humid, rural location (Great Smoky Mountains, Tennessee, USA): Chemical and temporal characteristics
- Author
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YU, L, primary, SHULMAN, M, additional, KOPPERUD, R, additional, and HILDEMANN, L, additional
- Published
- 2005
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10. Nuclear export of the human immunodeficiency virus type 1 nucleocytoplasmic shuttle protein Rev is mediated by its activation domain and is blocked by transdominant negative mutants
- Author
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Szilvay, A M, primary, Brokstad, K A, additional, Kopperud, R, additional, Haukenes, G, additional, and Kalland, K H, additional
- Published
- 1995
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11. Genome-Wide Meta-Analyses of Breast, Ovarian, and Prostate Cancer Association Studies Identify Multiple New Susceptibility Loci Shared by at Least Two Cancer Types
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Kar, S. P., Beesley, J., Amin Al Olama, A., Michailidou, K., Tyrer, J., Kote-Jarai, Z., Lawrenson, K., Lindstrom, S., Ramus, S. J., Thompson, D. J., Kibel, Adam Stuart, Dansonka-Mieszkowska, A., Michael, A., Dieffenbach, A. K., Gentry-Maharaj, A., Whittemore, A. S., Wolk, A., Monteiro, A., Peixoto, A., Kierzek, A., Cox, A., Rudolph, A., Gonzalez-Neira, A., Wu, A. H., Lindblom, A., Swerdlow, A., Ziogas, A., Ekici, A. B., Burwinkel, B., Karlan, B. Y., Nordestgaard, B. G., Blomqvist, C., Phelan, C., McLean, C., Pearce, C. L., Vachon, C., Cybulski, C., Slavov, C., Stegmaier, C., Maier, C., Ambrosone, C. B., Hogdall, C. K., Teerlink, C. C., Kang, D., Tessier, D. C., Schaid, D. J., Stram, D. O., Cramer, Daniel William, Neal, D. E., Eccles, D., Flesch-Janys, D., Edwards, D. R. V., Wokozorczyk, D., Levine, D. A., Yannoukakos, D., Sawyer, E. J., Bandera, E. V., Poole, Elizabeth M., Goode, E. L., Khusnutdinova, E., Hogdall, E., Song, F, Bruinsma, F., Heitz, F., Modugno, F., Hamdy, F. C., Wiklund, F., Giles, G. G., Olsson, H., Wildiers, H., Ulmer, H.-U., Pandha, H., Risch, H. A., Darabi, H., Salvesen, H. B., Nevanlinna, H., Gronberg, H., Brenner, H., Brauch, H., Anton-Culver, H., Song, H., Lim, H.-Y., McNeish, I., Campbell, I., Vergote, I., Gronwald, J., Lubinski, J., Stanford, J. L., Benitez, J., Doherty, J. A., Permuth, J. B., Chang-Claude, J., Donovan, J. L., Dennis, J., Schildkraut, J. M., Schleutker, J., Hopper, J. L., Kupryjanczyk, J., Park, J. Y., Figueroa, J., Clements, J. A., Knight, J. A., Peto, J., Cunningham, J. M., Pow-Sang, J., Batra, J., Czene, K., Lu, K. H., Herkommer, K., Khaw, K.-T., Matsuo, K., Muir, K., Offitt, K., Chen, K., Moysich, K. B., Aittoma ki, K., Odunsi, K., Kiemeney, L. A., Massuger, L. F. A. G., Fitzgerald, L. M., Cook, L. S., Cannon-Albright, L., Hooning, M. J., Pike, M. C., Bolla, M. K., Luedeke, M., Teixeira, M. R., Goodman, M. T., Schmidt, M. K., Riggan, M., Aly, M., Rossing, M. A., Beckmann, M. W., Moisse, M., Sanderson, M., Southey, M. C., Jones, M., Lush, M., Hildebrandt, M. A. T., Hou, M.-F., Schoemaker, M. J., Garcia-Closas, M., Bogdanova, N., Rahman, N., Le, N. D., Orr, N., Wentzensen, N., Pashayan, N., Peterlongo, P., Guenel, P., Brennan, P., Paulo, P., Webb, P. M., Broberg, P., Fasching, P. A., Devilee, P., Wang, Q., Cai, Q., Li, Q., Kaneva, R., Butzow, R., Kopperud, R. K., Schmutzler, R. K., Stephenson, R. A., MacInnis, R. J., Hoover, R. N., Winqvist, R., Ness, R., Milne, R. L., Travis, R. C., Benlloch, S., Olson, S. H., McDonnell, S. K., Tworoger, Shelley Slate, Maia, S., Berndt, S., Lee, S. C., Teo, S.-H., Thibodeau, S. N., Bojesen, S. E., Gapstur, S. M., Kjaer, S. K., Pejovic, T., Tammela, T. L. J., Do rk, T., Bru ning, T., Wahlfors, T., Key, T. J., Edwards, T. L., Menon, U., Hamann, U., Mitev, V., Kosma, V.-M., Setiawan, V. W., Kristensen, V., Arndt, V., Vogel, W., Zheng, W., Sieh, W., Blot, W. J., Kluzniak, W., Shu, X.-O., Gao, Y.-T., Schumacher, F., Freedman, M. L., Berchuck, A., Dunning, A. M., Simard, J., Haiman, C. A., Spurdle, A., Sellers, T. A., Hunter, David J., Henderson, B. E., Kraft, Peter Elias, Chanock, S. J., Couch, F. J., Hall, P., Gayther, S. A., Easton, D. F., Chenevix-Trench, G., Eeles, R., Pharoah, P. D. P., Lambrechts, D., and undefined, undefined
- Subjects
breast cancer ,ovarian cancer ,prostate cancer ,genome-wide association studies ,pleiotropy - Abstract
Breast, ovarian, and prostate cancers are hormone-related and may have a shared genetic basis, but this has not been investigated systematically by genome-wide association (GWA) studies. Meta-analyses combining the largest GWA meta-analysis data sets for these cancers totaling 112,349 cases and 116,421 controls of European ancestry, all together and in pairs, identified at P < 10(-8) seven new cross-cancer loci: three associated with susceptibility to all three cancers (rs17041869/2q13/BCL2L11; rs7937840/11q12/INCENP; rs1469713/19p13/GATAD2A), two breast and ovarian cancer risk loci (rs200182588/9q31/SMC2; rs8037137/15q26/RCCD1), and two breast and prostate cancer risk loci (rs5013329/1p34/NSUN4; rs9375701/6q23/L3MBTL3). Index variants in five additional regions previously associated with only one cancer also showed clear association with a second cancer type. Cell-type-specific expression quantitative trait locus and enhancer-gene interaction annotations suggested target genes with potential cross-cancer roles at the new loci. Pathway analysis revealed significant enrichment of death receptor signaling genes near loci with P < 10(-5) in the three-cancer meta-analysis., Other Research Unit
- Published
- 2016
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12. Multi-parametric single cell evaluation defines distinct drug responses in healthy hematologic cells that are retained in corresponding malignant cell types.
- Author
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Majumder MM, Leppä AM, Hellesøy M, Dowling P, Malyutina A, Kopperud R, Bazou D, Andersson E, Parsons A, Tang J, Kallioniemi O, Mustjoki S, O'Gorman P, Wennerberg K, Porkka K, Gjertsen BT, and Heckman CA
- Subjects
- Flow Cytometry, Humans, Proteomics, Leukemia, Lymphocytic, Chronic, B-Cell drug therapy, Leukemia, Myeloid, Acute, Pharmaceutical Preparations
- Abstract
Innate drug sensitivity in healthy cells aids identification of lineage specific anti-cancer therapies and reveals off-target effects. To characterize the diversity in drug responses in the major hematopoietic cell types, we simultaneously assessed their sensitivity to 71 small molecules utilizing a multi-parametric flow cytometry assay and mapped their proteomic and basal signaling profiles. Unsupervised hierarchical clustering identified distinct drug responses in healthy cell subsets based on their cellular lineage. Compared to other cell types, CD19
+ /B and CD56+ /NK cells were more sensitive to dexamethasone, venetoclax and midostaurin, while monocytes were more sensitive to trametinib. Venetoclax exhibited dose-dependent cell selectivity that inversely correlated to STAT3 phosphorylation. Lineage specific effect of midostaurin was similarly detected in CD19+ /B cells from healthy, acute myeloid leukemia and chronic lymphocytic leukemia samples. Comparison of drug responses in healthy and neoplastic cells showed that healthy cell responses are predictive of the corresponding malignant cell response. Taken together, understanding drug sensitivity in the healthy cell-of-origin provides opportunities to obtain a new level of therapy precision and avoid off-target toxicity., (Copyright© 2020 Ferrata Storti Foundation.)- Published
- 2020
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13. Epac1 null mice have nephrogenic diabetes insipidus with deficient corticopapillary osmotic gradient and weaker collecting duct tight junctions.
- Author
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Sivertsen Åsrud K, Bjørnstad R, Kopperud R, Pedersen L, van der Hoeven B, Karlsen TV, Brekke Rygh C, Curry FR, Bakke M, Reed RK, Tenstad O, and Døskeland SO
- Subjects
- Animals, Diabetes Insipidus, Nephrogenic metabolism, Female, Guanine Nucleotide Exchange Factors genetics, Kidney Tubules, Collecting metabolism, Kidney Tubules, Collecting pathology, Mice, Mice, Inbred C57BL, Diabetes Insipidus, Nephrogenic genetics, Diabetes Insipidus, Nephrogenic physiopathology, Gene Deletion, Guanine Nucleotide Exchange Factors deficiency, Kidney Tubules, Collecting physiopathology, Osmosis, Tight Junctions pathology
- Abstract
Aim: The cAMP-mediator Epac1 (RapGef3) has high renal expression. Preliminary observations revealed increased diuresis in Epac1
-/- mice. We hypothesized that Epac1 could restrict diuresis by promoting transcellular collecting duct (CD) water and urea transport or by stabilizing CD paracellular junctions to reduce osmolyte loss from the renal papillary interstitium., Methods: In Epac1-/- and Wt C57BL/6J mice, renal papillae, dissected from snap-frozen kidneys, were assayed for the content of key osmolytes. Cell junctions were analysed by transmission electron microscopy. Urea transport integrity was evaluated by urea loading with 40% protein diet, endogenous vasopressin production was manipulated by intragastric water loading and moderate dehydration and vasopressin type 2 receptors were stimulated selectively by i.p.-injected desmopressin (dDAVP). Glomerular filtration rate (GFR) was estimated as [14 C]inulin clearance. The glomerular filtration barrier was evaluated by urinary albumin excretion and microvascular leakage by the renal content of time-spaced intravenously injected125 I- and131 I-labelled albumin., Results: Epac1-/- mice had increased diuresis and increased free water clearance under antidiuretic conditions. They had shorter and less dense CD tight junction (TJs) and attenuated corticomedullary osmotic gradient. Epac1-/- mice had no increased protein diet-induced urea-dependent osmotic diuresis, and expressed Wt levels of aquaporin-2 (AQP-2) and urea transporter A1/3 (UT-A1/3). Epac1-/- mice had no urinary albumin leakage and unaltered renal microvascular albumin extravasation. Their GFR was moderately increased, unless when treated with furosemide., Conclusion: Our results conform to the hypothesis that Epac1-dependent mechanisms protect against diabetes insipidus by maintaining renal papillary osmolarity and the integrity of CD TJs., (© 2020 The Authors. Acta Physiologica published by John Wiley & Sons Ltd on behalf of Scandinavian Physiological Society.)- Published
- 2020
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14. White Blood Cell BRCA1 Promoter Methylation Status and Ovarian Cancer Risk.
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Lønning PE, Berge EO, Bjørnslett M, Minsaas L, Chrisanthar R, Høberg-Vetti H, Dulary C, Busato F, Bjørneklett S, Eriksen C, Kopperud R, Axcrona U, Davidson B, Bjørge L, Evans G, Howell A, Salvesen HB, Janszky I, Hveem K, Romundstad PR, Vatten LJ, Tost J, Dørum A, and Knappskog S
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Case-Control Studies, Female, Genes, BRCA1, Germ-Line Mutation, Humans, Infant, Newborn, Middle Aged, Norway, Ovarian Neoplasms chemistry, Ovarian Neoplasms pathology, Polymerase Chain Reaction, Risk, DNA Methylation, Leukocytes, Ovarian Neoplasms genetics, Promoter Regions, Genetic
- Abstract
Background: The role of normal tissue gene promoter methylation in cancer risk is poorly understood., Objective: To assess associations between normal tissue BRCA1 methylation and ovarian cancer risk., Design: 2 case-control (initial and validation) studies., Setting: 2 hospitals in Norway (patients) and a population-based study (control participants)., Participants: 934 patients and 1698 control participants in the initial study; 607 patients and 1984 control participants in the validation study., Measurements: All patients had their blood sampled before chemotherapy. White blood cell (WBC) BRCA1 promoter methylation was determined by using methylation-specific quantitative polymerase chain reaction, and the percentage of methylation-positive samples was compared between population control participants and patients with ovarian cancer, including the subgroup with high-grade serous ovarian cancer (HGSOC)., Results: In the initial study, BRCA1 methylation was more frequent in patients with ovarian cancer than control participants (6.4% vs. 4.2%; age-adjusted odds ratio [OR], 1.83 [95% CI, 1.27 to 2.63]). Elevated methylation, however, was restricted to patients with HGSOC (9.6%; OR, 2.91 [CI, 1.85 to 4.56]), in contrast to 5.1% and 4.0% of patients with nonserous and low-grade serous ovarian cancer (LGSOC), respectively. These findings were replicated in the validation study (methylation-positive status in 9.1% of patients with HGSOC vs. 4.3% of control participants-OR, 2.22 [CI 1.40 to 3.52]-4.1% of patients with nonserous ovarian cancer, and 2.7% of those with LGSOC). The results were not influenced by tumor burden, storage time, or WBC subfractions. In separate analyses of young women and newborns, BRCA1 methylation was detected in 4.1% (CI, 1.8% to 6.4%) and 7.0% (CI, 5.0% to 9.1%), respectively., Limitations: Patients with ovarian cancer were recruited at the time of diagnosis in a hospital setting., Conclusion: Constitutively normal tissue BRCA1 promoter methylation is positively associated with risk for HGSOC., Primary Funding Source: Norwegian Cancer Society.
- Published
- 2018
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- View/download PDF
15. Androgen receptor as potential therapeutic target in metastatic endometrial cancer.
- Author
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Tangen IL, Onyango TB, Kopperud R, Berg A, Halle MK, Øyan AM, Werner HM, Trovik J, Kalland KH, Salvesen HB, and Krakstad C
- Subjects
- Aged, Androgen Antagonists therapeutic use, Benzamides, Estrogen Receptor alpha metabolism, Female, Gene Expression Regulation, Neoplastic, Humans, Immunohistochemistry, Middle Aged, Neoplasm Metastasis, Nitriles, Phenotype, Phenylthiohydantoin analogs & derivatives, Phenylthiohydantoin pharmacology, RNA, Messenger metabolism, Receptors, Progesterone metabolism, Tissue Array Analysis, Treatment Outcome, Endometrial Neoplasms metabolism, Receptors, Androgen metabolism
- Abstract
Purpose: The expression and involvement of estrogen (ER) and progesterone receptor (PR) is extensively studied in endometrial cancer. Androgen receptor (AR) is a hormone receptor less studied in female cancers, and we here aim to investigate the expression level of AR in endometrial cancer precursor lesions, primary tumors and metastases, and its potential as therapeutic target., Results: Expression of AR was observed in 93% of hyperplasias, but only in 41% of non-endometrioid tumors. Compared to estrogen and progesterone receptor AR is more commonly expressed in metastatic lesions, and AR status is discordant in primary and metastatic lesions in a large proportion of cases. AR protein level was significantly associated with survival (P < 0.001), and a calculated AR to ERα ratio identified a subgroup of patients with particular poor outcome. The anti-androgen enzalutamide may have a growth inhibitory effect in endometrial cancer cells based on experiments with primary endometrial tumor cells., Materials and Methods: 718 primary endometrial cancers and 298 metastatic lesions (from 142 patients) were investigated for expression of AR in relation to survival, clinical and histopathological data. Protein levels were investigated by immunohistochemistry and reverse phase protein array; mRNA levels by DNA oligonucleotide microarray. The effect of androgen stimulation and inhibition was tested on primary endometrial tumor cells., Conclusions: A large proportion of metastatic endometrial cancer lesions express AR, which may be a potential target in these patients. Treatment targeting AR may be of particular benefit in patients with high AR levels compared to ERα levels., Competing Interests: No potential conflicts of interest was disclosed.
- Published
- 2016
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16. Multimodal Imaging of Orthotopic Mouse Model of Endometrial Carcinoma.
- Author
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Haldorsen IS, Popa M, Fonnes T, Brekke N, Kopperud R, Visser NC, Rygh CB, Pavlin T, Salvesen HB, McCormack E, and Krakstad C
- Subjects
- Aged, Animals, Cell Line, Tumor, Contrast Media, Dideoxynucleosides chemistry, Disease Models, Animal, Disease Progression, Female, Fluorodeoxyglucose F18 chemistry, Humans, Mice, Mice, Inbred NOD, Mice, SCID, Neoplasm Metastasis, Neoplasm Transplantation, Positron-Emission Tomography, Tomography, X-Ray Computed, Carcinoma pathology, Endometrial Neoplasms pathology, Multimodal Imaging
- Abstract
Background: Orthotopic endometrial cancer models provide a unique tool for studies of tumour growth and metastatic spread. Novel preclinical imaging methods also have the potential to quantify functional tumour characteristics in vivo, with potential relevance for monitoring response to therapy., Methods: After orthotopic injection with luc-expressing endometrial cancer cells, eleven mice developed disease detected by weekly bioluminescence imaging (BLI). In parallel the same mice underwent positron emission tomography-computed tomography (PET-CT) and magnetic resonance imaging (MRI) employing 18F-fluorodeoxyglocose (18F-FDG) or 18F- fluorothymidine (18F-FLT) and contrast reagent, respectively. The mice were sacrificed when moribund, and post-mortem examination included macroscopic and microscopic examination for validation of growth of primary uterine tumours and metastases. PET-CT was also performed on a patient derived model (PDX) generated from a patient with grade 3 endometrioid endometrial cancer., Results: Increased BLI signal during tumour growth was accompanied by increasing metabolic tumour volume (MTV) and increasing MTV x mean standard uptake value of the tumour (SUVmean) in 18F-FDG and 18F-FLT PET-CT, and MRI conspicuously depicted the uterine tumour. At necropsy 82% (9/11) of the mice developed metastases detected by the applied imaging methods. 18F-FDG PET proved to be a good imaging method for detection of patient derived tumour tissue., Conclusions: We demonstrate that all imaging modalities enable monitoring of tumour growth and metastatic spread in an orthotopic mouse model of endometrial carcinoma. Both PET tracers, 18F-FDG and 18F-FLT, appear to be equally feasible for detecting tumour development and represent, together with MRI, promising imaging tools for monitoring of patient-derived xenograft (PDX) cancer models.
- Published
- 2015
- Full Text
- View/download PDF
17. Time-dependent inhibitory effects of cGMP-analogues on thrombin-induced platelet-derived microparticles formation, platelet aggregation, and P-selectin expression.
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Nygaard G, Herfindal L, Kopperud R, Aragay AM, Holmsen H, Døskeland SO, Kleppe R, and Selheim F
- Subjects
- Cell-Derived Microparticles physiology, Cells, Cultured, Cyclic AMP analogs & derivatives, Cyclic GMP pharmacology, Cyclic GMP-Dependent Protein Kinases metabolism, Dichlororibofuranosylbenzimidazole analogs & derivatives, Dichlororibofuranosylbenzimidazole pharmacology, Humans, Time Factors, Cell-Derived Microparticles drug effects, Cyclic GMP analogs & derivatives, P-Selectin biosynthesis, Platelet Aggregation drug effects, Receptors, Thrombin physiology, Thionucleotides pharmacology, Thrombin pharmacology
- Abstract
In platelets, nitric oxide (NO) activates cGMP/PKG signalling, whereas prostaglandins and adenosine signal through cAMP/PKA. Cyclic nucleotide signalling has been considered to play an inhibitory role in platelets. However, an early stimulatory effect of NO and cGMP-PKG signalling in low dose agonist-induced platelet activation have recently been suggested. Here, we investigated whether different experimental conditions could explain some of the discrepancy reported for platelet cGMP-PKG-signalling. We treated gel-filtered human platelets with cGMP and cAMP analogues, and used flow cytometric assays to detect low dose thrombin-induced formation of small platelet aggregates, single platelet disappearance (SPD), platelet-derived microparticles (PMP) and thrombin receptor agonist peptide (TRAP)-induced P-selectin expression. All four agonist-induced platelet activation phases were blocked when platelets were costimulated with the PKG activators 8-Br-PET-cGMP or 8-pCPT-cGMP and low-doses of thrombin or TRAP. However, extended incubation with 8-Br-PET-cGMP decreased its inhibition of TRAP-induced P-selectin expression in a time-dependent manner. This effect did not involve desensitisation of PKG or PKA activity, measured as site-specific VASP phosphorylation. Moreover, PKG activators in combination with the PKA activator Sp-5,6-DCL-cBIMPS revealed additive inhibitory effect on TRAP-induced P-selectin expression. Taken together, we found no evidence for a stimulatory role of cGMP/PKG in platelets activation and conclude rather that cGMP/PKG signalling has an important inhibitory function in human platelet activation., (Copyright © 2014 Elsevier Inc. All rights reserved.)
- Published
- 2014
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18. Introduction of aromatic ring-containing substituents in cyclic nucleotides is associated with inhibition of toxin uptake by the hepatocyte transporters OATP 1B1 and 1B3.
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Herfindal L, Krakstad C, Myhren L, Hagland H, Kopperud R, Teigen K, Schwede F, Kleppe R, and Døskeland SO
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- Animals, Apoptosis drug effects, Bacterial Toxins pharmacokinetics, Bacterial Toxins pharmacology, Biological Transport drug effects, Cells, Cultured, Cyclic AMP analogs & derivatives, Cyclic AMP metabolism, Cyclic AMP pharmacology, Cyclic AMP-Dependent Protein Kinases metabolism, Cyclic GMP analogs & derivatives, Cyclic GMP metabolism, Cyclic GMP pharmacology, Cyclic GMP-Dependent Protein Kinases metabolism, Dose-Response Relationship, Drug, Glycocholic Acid metabolism, Glycocholic Acid pharmacokinetics, Glycocholic Acid pharmacology, Guanine Nucleotide Exchange Factors metabolism, HEK293 Cells, Hepatocytes cytology, Hepatocytes metabolism, Humans, Liver-Specific Organic Anion Transporter 1, Male, Microscopy, Confocal, Models, Molecular, Nucleotides, Cyclic chemistry, Organic Anion Transporters chemistry, Organic Anion Transporters genetics, Organic Anion Transporters, Sodium-Independent chemistry, Organic Anion Transporters, Sodium-Independent genetics, Peptides, Cyclic metabolism, Peptides, Cyclic pharmacokinetics, Peptides, Cyclic pharmacology, Protein Structure, Tertiary, Rats, Wistar, Solute Carrier Organic Anion Transporter Family Member 1B3, Bacterial Toxins metabolism, Hepatocytes drug effects, Nucleotides, Cyclic pharmacology, Organic Anion Transporters metabolism, Organic Anion Transporters, Sodium-Independent metabolism
- Abstract
Analogs of the cyclic nucleotides cAMP and cGMP have been extensively used to mimic or modulate cellular events mediated by protein kinase A (PKA), Exchange protein directly activated by cAMP (Epac), or protein kinase G (PKG). We report here that some of the most commonly used cyclic nucleotide analogs inhibit transmembrane transport mediated by the liver specific organic anion transporter peptides OATP1B1 and OATP1B3, unrelated to actions on Epac, PKA or PKG. Several cAMP analogs, particularly with 8-pCPT-substitution, inhibited nodularin (Nod) induced primary rat hepatocyte apoptosis. Inhibition was not mediated by PKA or Epac, since increased endogenous cAMP, and some strong PKA- or Epac-activating analogs failed to protect cells against Nod induced apoptosis. The cAMP analogs inhibiting Nod induced hepatocyte apoptosis also reduced accumulation of radiolabeled Nod or cholic acid in primary rat hepatocytes. They also inhibited Nod induced apoptosis in HEK293 cells with enforced expression of OATP1B1 or 1B3, responsible for Nod transport into cells. Similar results were found with adenosine analogs, disconnecting the inhibitory effect of certain cAMP analogs from PKA or Epac. The most potent inhibitors were 8-pCPT-6-Phe-cAMP and 8-pCPT-2'-O-Me-cAMP, whereas analogs like 6-MB-cAMP or 8-Br-cAMP did not inhibit Nod uptake. This suggests that the addition of aromatic ring-containing substituents like the chloro-phenyl-thio group to the purines of cyclic nucleotides increases their ability to inhibit the OATP-mediated transport. Taken together, our data show that aromatic ring substituents can add unwanted effects to cyclic nucleotides, and that such nucleotide analogs must be used with care, particularly when working with cells expressing OATP1B1/1B3, like hepatocytes, or intact animals where hepatic metabolism can be an issue, as well as certain cancer cells. On the other hand, cAMP analogs with substituents like bromo, monobutyryl were non-inhibitory, and could be considered an alternative when working with cells expressing OATP1 family members.
- Published
- 2014
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19. Off-target effect of the Epac agonist 8-pCPT-2'-O-Me-cAMP on P2Y12 receptors in blood platelets.
- Author
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Herfindal L, Nygaard G, Kopperud R, Krakstad C, Døskeland SO, and Selheim F
- Subjects
- Animals, Blood Platelets metabolism, Cyclic AMP metabolism, Cyclic AMP pharmacology, Dose-Response Relationship, Drug, Guanine Nucleotide Exchange Factors genetics, Humans, Mice, Mice, Transgenic, Models, Molecular, P-Selectin metabolism, Phosphorylation, Platelet Activation, Protein Transport, Tetradecanoylphorbol Acetate pharmacology, Thromboxanes metabolism, Blood Platelets drug effects, Cyclic AMP analogs & derivatives, Guanine Nucleotide Exchange Factors agonists, Receptors, Purinergic P2Y12 metabolism
- Abstract
The primary target of the cAMP analogue 8-pCPT-2'-O-Me-cAMP is exchange protein directly activated by cAMP (Epac). Here we tested potential off-target effects of the Epac activator on blood platelet activation signalling. We found that the Epac analogue 8-pCPT-2'-O-Me-cAMP inhibits agonist-induced-GPCR-stimulated, but not collagen-stimulated, P-selectin surface expression on Epac1 deficient platelets. In human platelets, 8-pCPT-2'-O-Me-cAMP inhibited P-selectin expression elicited by the PKC activator PMA. This effect was abolished in the presence of the extracellular ADP scavenger system CP/CPK. In silico modelling of 8-pCPT-2'O-Me-cAMP binding into the purinergic platelet receptor P2Y12 revealed that the analogue docks similar to the P2Y12 antagonist 2MeSAMP. The 8-pCPT-2'-O-Me-cAMP analogue per se, did not provoke Rap 1 (Rap 1-GTP) activation or phosphorylation on the vasodilator-stimulated phosphoprotein (VASP) at Ser-157. In addition, the protein kinase A (PKA) antagonists Rp-cAMPS and Rp-8-Br-cAMPS failed to block the inhibitory effect of 8-pCPT-2'-O-Me-cAMP on thrombin- and TRAP-induced Rap 1 activation, thus suggesting that PKA is not involved. We conclude that the 8-pCPT-2'-O-Me-cAMP analogue is able to inhibit agonist-induced-GPCR-stimulated P-selectin independent from Epac1; the off-target effect of the analogue appears to be mediated by antagonistic P2Y12 receptor binding. This has implications when using cAMP analogues on specialised system involving such receptors. We found, however that the Epac agonist 8-Br-2'-O-Me-cAMP did not affect platelet activation at similar concentrations., (Copyright © 2013 Elsevier Inc. All rights reserved.)
- Published
- 2013
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20. Activation of protein kinase A and exchange protein directly activated by cAMP promotes adipocyte differentiation of human mesenchymal stem cells.
- Author
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Jia B, Madsen L, Petersen RK, Techer N, Kopperud R, Ma T, Døskeland SO, Ailhaud G, Wang J, Amri EZ, and Kristiansen K
- Subjects
- 1-Methyl-3-isobutylxanthine pharmacology, Adipocytes metabolism, Adipose Tissue metabolism, Animals, Cell Differentiation, Cell Line, Dexamethasone pharmacology, Epoprostenol metabolism, Gene Expression Profiling, Humans, Insulin pharmacology, Mice, Obesity metabolism, Rosiglitazone, Signal Transduction, Thiazolidinediones pharmacology, Cyclic AMP metabolism, Cyclic AMP-Dependent Protein Kinases metabolism, Gene Expression Regulation, Guanine Nucleotide Exchange Factors metabolism, Mesenchymal Stem Cells cytology
- Abstract
Human mesenchymal stem cells are primary multipotent cells capable of differentiating into several cell types including adipocytes when cultured under defined in vitro conditions. In the present study we investigated the role of cAMP signaling and its downstream effectors, protein kinase A (PKA) and exchange protein directly activated by cAMP (Epac) in adipocyte conversion of human mesenchymal stem cells derived from adipose tissue (hMADS). We show that cAMP signaling involving the simultaneous activation of both PKA- and Epac-dependent signaling is critical for this process even in the presence of the strong adipogenic inducers insulin, dexamethasone, and rosiglitazone, thereby clearly distinguishing the hMADS cells from murine preadipocytes cell lines, where rosiglitazone together with dexamethasone and insulin strongly promotes adipocyte differentiation. We further show that prostaglandin I(2) (PGI(2)) may fully substitute for the cAMP-elevating agent isobutylmethylxanthine (IBMX). Moreover, selective activation of Epac-dependent signaling promoted adipocyte differentiation when the Rho-associated kinase (ROCK) was inhibited. Unlike the case for murine preadipocytes cell lines, long-chain fatty acids, like arachidonic acid, did not promote adipocyte differentiation of hMADS cells in the absence of a PPARγ agonist. However, prolonged treatment with the synthetic PPARδ agonist L165041 promoted adipocyte differentiation of hMADS cells in the presence of IBMX. Taken together our results emphasize the need for cAMP signaling in concert with treatment with a PPARγ or PPARδ agonist to secure efficient adipocyte differentiation of human hMADS mesenchymal stem cells.
- Published
- 2012
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21. The cAMP-dependent protein kinase pathway as therapeutic target: possibilities and pitfalls.
- Author
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Kleppe R, Krakstad C, Selheim F, Kopperud R, and Døskeland SO
- Subjects
- Animals, Cyclic AMP antagonists & inhibitors, Cyclic AMP-Dependent Protein Kinases antagonists & inhibitors, Humans, Models, Biological, Protein Kinase Inhibitors pharmacology, Structure-Activity Relationship, Cyclic AMP metabolism, Cyclic AMP-Dependent Protein Kinases metabolism, Signal Transduction drug effects
- Abstract
The prototype second messenger cAMP and its major mediator, the cAMP-dependent protein kinase (PKA), is able to control simultaneously multiple processes within the same cell. This appears to be achieved through its unique dissociative regulation and the spatiotemporal regulation of both cAMP and PKA. The widespread tissue distribution and physiological function of this pathway makes it an attractive, but challenging pharmacological target. We will discuss current progress in manipulating the fine-tuning of PKA, and outline so far underexploited possibilities for therapy, such as novel ways to target specific substrates and catalytic cycle intermediates of PKA. An attractive strategy to achieve a more focused pharmacological treatment is to combine more traditional targeting of extracellular receptors or ligands with that of intracellular signaling pathway components. The cAMP signaling pathway provides a variety of possibilities for such an approach.
- Published
- 2011
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22. Dipyridamole synergizes with nitric oxide to prolong inhibition of thrombin-induced platelet shape change.
- Author
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Jensen BO, Kleppe R, Kopperud R, Nygaard G, Døskeland SO, Holmsen H, and Selheim F
- Subjects
- Blood Platelets physiology, Cell Adhesion Molecules metabolism, Cell Shape drug effects, Cyclic AMP metabolism, Cyclic AMP-Dependent Protein Kinases metabolism, Cyclic GMP metabolism, Cyclic GMP-Dependent Protein Kinases antagonists & inhibitors, Cyclic GMP-Dependent Protein Kinases metabolism, Cyclic Nucleotide Phosphodiesterases, Type 5 metabolism, Drug Synergism, Humans, Microfilament Proteins metabolism, Models, Molecular, Nitric Oxide metabolism, Nitroprusside metabolism, Nitroprusside pharmacology, Phosphoproteins metabolism, Phosphorylation, Platelet Aggregation drug effects, Platelet Aggregation physiology, Stroke prevention & control, Thrombin metabolism, Vasodilator-Stimulated Phosphoprotein, Blood Platelets drug effects, Dipyridamole pharmacology, Nitric Oxide pharmacology, Phosphodiesterase Inhibitors pharmacology, Thrombin pharmacology
- Abstract
We and others have previously demonstrated that nitric oxide (NO)-induced inhibition of platelet shape change is important in regulating platelet adhesion and aggregation, and therapeutic intervention of this pathway is clinically relevant for secondary prevention of stroke with dipyridamole. In the present study, we investigated whether dipyridamole affected the shape change of aspirinated platelets. Platelet shape change was inhibited using both authentic NO and sodium nitroprusside, as monitored by light scattering and mean platelet volume measurements. Dipyridamole synergized with NO, even at supra-therapeutic levels, to inhibit thrombin-induced shape change and further potentiated cAMP dependent protein kinase (PKA) mediated phosphorylation of vasodilator stimulated phosphoprotein (VASP) Ser157, even without altered levels of platelet cAMP. The effect of dipyridamole on NO-inhibited shape change depended on cGMP synthesis as evaluated by inhibition of soluble guanylyl cyclase. Measured increases in cGMP levels by dipyridamole and NO was assessed by mathematical modeling and found to be consistent with inhibition of phosphodiesterase 5 (PDE5). The model could explain the unexpected efficiency of dipyridamole in inhibiting PDE5 at the measured cGMP levels, by the majority of cGMP being bound to cGMP-dependent protein kinase (PKG). Still, selective activators of PKG failed to extend NO-mediated inhibition of the thrombin-induced platelet shape change, suggesting that PKG was not responsible for the inhibitory effect of NO and dipyridamole on shape change. The effects of dipyridamole were independent of the prostanoid and ADP pathways. Thus, the effect of dipyridamole on NO-mediated inhibition of platelet shape change may be an important and additional beneficial therapeutic effect of dipyridamole, which we suggest, is acting though localized amplification of the NO/cGMP/Phosphodiesterase3/cAMP/PKA-pathway. Probably, the efficiency of dipyridamole could be amplified clinically with NO donors.
- Published
- 2011
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23. POSTMan (POST-translational modification analysis), a software application for PTM discovery.
- Author
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Arntzen MØ, Osland CL, Raa CR, Kopperud R, Døskeland SO, Lewis AE, and D'Santos CS
- Subjects
- Acetylation, Chromatography, Liquid methods, Mass Spectrometry methods, Peptides analysis, Phenylalanine Hydroxylase analysis, Phenylalanine Hydroxylase metabolism, Phosphorylation, Proteomics methods, Reproducibility of Results, Peptides metabolism, Protein Processing, Post-Translational, Software
- Abstract
Post-translationally modified peptides present in low concentrations are often not selected for CID, resulting in no sequence information for these peptides. We have developed a software POSTMan (POST-translational Modification analysis) allowing post-translationally modified peptides to be targeted for fragmentation. The software aligns LC-MS runs (MS(1) data) between individual runs or within a single run and isolates pairs of peptides which differ by a user defined mass difference (post-translationally modified peptides). The method was validated for acetylated peptides and allowed an assessment of even the basal protein phosphorylation of phenylalanine hydroxylase (PHA) in intact cells.
- Published
- 2009
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24. Epac1 and cAMP-dependent protein kinase holoenzyme have similar cAMP affinity, but their cAMP domains have distinct structural features and cyclic nucleotide recognition.
- Author
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Dao KK, Teigen K, Kopperud R, Hodneland E, Schwede F, Christensen AE, Martinez A, and Døskeland SO
- Subjects
- Amino Acid Sequence, Cyclic AMP-Dependent Protein Kinases metabolism, Guanine Nucleotide Exchange Factors metabolism, Holoenzymes chemistry, Humans, Kinetics, Models, Molecular, Molecular Sequence Data, Phylogeny, Protein Binding, Protein Structure, Tertiary, Recombinant Proteins chemistry, Sequence Homology, Amino Acid, Cyclic AMP metabolism, Cyclic AMP-Dependent Protein Kinases chemistry, Guanine Nucleotide Exchange Factors chemistry
- Abstract
The cAMP-dependent protein kinase (PKA I and II) and the cAMP-stimulated GDP exchange factors (Epac1 and -2) are major cAMP effectors. The cAMP affinity of the PKA holoenzyme has not been determined previously. We found that cAMP bound to PKA I with a K(d) value (2.9 microM) similar to that of Epac1. In contrast, the free regulatory subunit of PKA type I (RI) had K(d) values in the low nanomolar range. The cAMP sites of RI therefore appear engineered to respond to physiological cAMP concentrations only when in the holoenzyme form, whereas Epac can respond in its free form. Epac is phylogenetically younger than PKA, and its functional cAMP site has presumably evolved from site B of PKA. A striking feature is the replacement of a conserved Glu in PKA by Gln (Epac1) or Lys (Epac2). We found that such a switch (E326Q) in site B of human RIalpha led to a 280-fold decreased cAMP affinity. A similar single switch early in Epac evolution could therefore have decreased the high cAMP affinity of the free regulatory subunit sufficiently to allow Epac to respond to physiologically relevant cAMP levels. Molecular dynamics simulations and cAMP analog mapping indicated that the E326Q switch led to flipping of Tyr-373, which normally stacks with the adenine ring of cAMP. Combined molecular dynamics simulation, GRID analysis, and cAMP analog mapping of wild-type and mutated BI and Epac1 revealed additional differences, independent of the Glu/Gln switch, between the binding sites, regarding space (roominess), hydrophobicity/polarity, and side chain flexibility. This helped explain the specificity of current cAMP analogs and, more importantly, lays a foundation for the generation of even more discriminative analogs.
- Published
- 2006
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25. Characterization of organic compounds collected during southeastern aerosol and visibility study: water-soluble organic species.
- Author
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Yu LE, Shulman ML, Kopperud R, and Hildemann LM
- Subjects
- Carboxylic Acids analysis, Environmental Monitoring, Periodicity, Tennessee, Aerosols, Air Pollutants analysis
- Abstract
As part of the Southeastern Aerosol and Visibility Study (SEAVS), water-soluble organic species (WSOS) in fine aerosols collected from July 15 to August 25, 1995, at the Great Smoky Mountain National Park, Tennessee (USA), were chemically classified into seven groups, with concentrations ranging from around 1 to >200 ng/m3. Dicarboxylic acids represented the dominant identified compound class, and succinic acid was the most abundant dicarboxylic acid. The trends in data suggest that most WSOS collected in the SEAVS samples were mainly generated from secondary photochemical reactions, especially during the first (cleaner) half of the sampling campaign. High relative humidity at the sampling site resulted in substantial water uptake by the aerosols, which may have enhanced the levels of succinic acid by reducing its rate of photooxidation. Concurrent trends in malic and malonic acid concentrations suggest these were generated from the oxidation of succinic acid. Consistent with the conversion of 3-hydroxypropanoic acid to malonic acid, it appears that 4-hydroxybutanoic acid served as a major precursor contributing to high levels of succinic acid in the daytime. Nocturnal WSOS generally followed the trend of diurnal WSOS, but they exhibited different chemical compositions and lower concentrations, unlike what has been reported for an urban site. A nocturnal-to-diurnal ratio of succinic acid larger than 0.25 may indicate an atmosphere dominated by photochemical reactions, rather than by primary emissions.
- Published
- 2005
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26. cAMP effector mechanisms. Novel twists for an 'old' signaling system.
- Author
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Kopperud R, Krakstad C, Selheim F, and Døskeland SO
- Subjects
- Animals, Cyclic AMP analogs & derivatives, Cyclic AMP-Dependent Protein Kinases metabolism, Enzyme Activation, GTP-Binding Proteins metabolism, Guanine Nucleotide Exchange Factors metabolism, Humans, Models, Biological, Receptors, Cyclic AMP metabolism, Cyclic AMP metabolism, Signal Transduction
- Abstract
Cyclic AMP (cAMP) has traditionally been thought to act exclusively through cAMP-dependent protein kinase (cAPK, PKA), but a growing number of cAMP effects are not attributable to general activation of cAPK. At present, cAMP is known also to directly regulate ion channels and the ubiquitous Rap guanine exchange factors Epac 1 and 2. Adding to the sophistication of cAMP signaling is the fact that (1) the cAPK holoenzyme is incompletely dissociated even at saturating cAMP, the level of free R subunit of cAPK being able to regulate the maximal activity of cAPK, (2) cAPK activity can be modulated by oxidative glutathionylation, and (3) cAPK is anchored close to relevant substrates, other signaling enzymes, and local compartments of cAMP. Finally, we will demonstrate an example of fine-tuning of cAMP signaling through synergistic induction of neurite extensions by cAPK and Epac.
- Published
- 2003
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27. Formation of inactive cAMP-saturated holoenzyme of cAMP-dependent protein kinase under physiological conditions.
- Author
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Kopperud R, Christensen AE, Kjarland E, Viste K, Kleivdal H, and Døskeland SO
- Subjects
- Catalysis, Cell Line, Dose-Response Relationship, Drug, Humans, Hydrogen-Ion Concentration, Kinetics, Oligopeptides pharmacology, Phosphorylation, Protein Binding, Spectrometry, Fluorescence, Time Factors, Transfection, Cyclic AMP metabolism, Cyclic AMP-Dependent Protein Kinases metabolism
- Abstract
The complex of the subunits (RIalpha, Calpha) of cAMP-dependent protein kinase I (cA-PKI) was much more stable (K(d) = 0.25 microm) in the presence of excess cAMP than previously thought. The ternary complex of C subunit with cAMP-saturated RIalpha or RIIalpha was devoid of catalytic activity against either peptide or physiological protein substrates. The ternary complex was destabilized by protein kinase substrate. Extrapolation from the in vitro data suggested about one-fourth of the C subunit to be in ternary complex in maximally cAMP-stimulated cells. Cells overexpressing either RIalpha or RIIalpha showed decreased CRE-dependent gene induction in response to maximal cAMP stimulation. This could be explained by enhanced ternary complex formation. Modulation of ternary complex formation by the level of R subunit may represent a novel way of regulating the cAMP kinase activity in maximally cAMP-stimulated cells.
- Published
- 2002
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28. 8-Substituted cAMP analogues reveal marked differences in adaptability, hydrogen bonding, and charge accommodation between homologous binding sites (AI/AII and BI/BII) in cAMP kinase I and II.
- Author
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Schwede F, Christensen A, Liauw S, Hippe T, Kopperud R, Jastorff B, and Døskeland SO
- Subjects
- Animals, Binding Sites, Cattle, Cyclic AMP chemistry, Cyclic AMP metabolism, Cyclic AMP-Dependent Protein Kinases chemistry, Hydrogen Bonding, Isoenzymes chemistry, Isoenzymes metabolism, Kinetics, Molecular Conformation, Muscle, Skeletal enzymology, Myocardium enzymology, Rabbits, Structure-Activity Relationship, Substrate Specificity, Cyclic AMP analogs & derivatives, Cyclic AMP-Dependent Protein Kinases metabolism
- Abstract
cAMP analogues, systematically substituted at position 8 of the adenine moiety (C8), were tested quantitatively for binding to each cAMP interaction site (A and B) of the regulatory subunits of cAMP-dependent protein kinase type I (RI) and II (RII). Site AII did not accommodate cAMP analogues with any bulk at position 8, whereas site AI accepted even bulky 8-substituents. This implies that the narrow, buried pocket of site AI facing position C8 of cAMP in the RI-cAMP crystal [Su, Y., Dostmann, W. R., Herberg, F. W., Durick, K., Xuong, N. H., Ten Eyck, L., Taylor, S. S., and Varughese, K. I. (1995) Science 269, 807-813] must undergo considerable conformational change and still support high-affinity cAMP analogue binding. The B sites of RI and RII differed in three respects. First, site BI had a lower affinity than site BII for cAMP analogues with hydrophobic, bulky 8-substituents. Second, site BI had a preference for substituents with hydrogen bonding donor potential close to C8, whereas site BII had a preference for substituents with hydrogen bonding acceptor potential. This implies that Tyr(371) of RI and the homologous Tyr(379) of RII differ in their hydrogen bonding preference. Third, site BI preferred analogues with a positively charged amino group that was an extended distance from C8, whereas site BII discriminated against a positive charge. The combined results allow refinement of the cAMP binding site geometry of RI and RII in solution, and suggest design of improved isozyme-specific cAMP analogues.
- Published
- 2000
- Full Text
- View/download PDF
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