80 results on '"K. Hinata"'
Search Results
2. Effect of eddy current dampers on the vibrational properties in superconducting levitation using melt-processed YBaCuO bulk superconductors
- Author
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K. Hinata, Hidekazu Teshima, Masamoto Tanaka, K. Nohguchi, and Katsuyoshi Miyamoto
- Subjects
Superconductivity ,Materials science ,Condensed matter physics ,Vertical vibration ,Energy Engineering and Power Technology ,Condensed Matter Physics ,Electronic, Optical and Magnetic Materials ,Damper ,law.invention ,Physics::Fluid Dynamics ,Vibration ,law ,Condensed Matter::Superconductivity ,Magnet ,Electrodynamic suspension ,Levitation ,Eddy current ,Electrical and Electronic Engineering ,Physics::Atmospheric and Oceanic Physics - Abstract
The effect of eddy current dampers on the vibrational properties in superconducting levitation has been investigated using melt-processed YBaCuO bulk superconductors. In vertical vibration, the damping was about 100 times improved by inserting eddy current dampers into the gap between a superconductor and a magnet. On the other hand, in horizontal vibration, eddy current dampers did not greatly affect the vibrationaal properties of superconducting levitation up to a given thickness of eddy current dampers.
- Published
- 1997
- Full Text
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3. Vibrational properties in superconducting levitation using melt-processed YBaCuO bulk superconductors
- Author
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Katsuyoshi Miyamoto, Masamoto Tanaka, K. Nohguchi, K. Hinata, and Hidekazu Teshima
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Superconductivity ,Vibration ,Materials science ,Condensed matter physics ,Condensed Matter::Superconductivity ,Magnet ,Vertical vibration ,Levitation ,Energy Engineering and Power Technology ,Electrical and Electronic Engineering ,Condensed Matter Physics ,Electronic, Optical and Magnetic Materials - Abstract
The vibrational properties in superconducting levitation using melt-processed YBaCuO superconductors have been investigated. In both vertical and horizontal vibrations, the resonant frequency linearly decreases when increasing the gap between superconductors and a magnet. Resonant frequencies of 1–2 Hz can be achieved for larger initial gaps in the horizontal vibration. The effect of the load-weight on the resonant frequency is small for all initial gaps in vertical and horizontal vibrations, except for smaller gaps in the vertical vibration. The fact that the resonant frequency in superconducting levitation is almost completely unaffected by the change in load weight is due to the levitation force properties.
- Published
- 1996
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- View/download PDF
4. RTD oscillators at 430–460 GHz with high output power (~200 µW) using integrated offset slot antennas
- Author
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Masahiro Asada, Haruki Yokoyama, Safumi Suzuki, M. Shiraishi, Hiroki Sugiyama, and K. Hinata
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Physics ,Offset (computer science) ,Electricity generation ,business.industry ,Terahertz radiation ,Resonant-tunneling diode ,Electrical engineering ,Optoelectronics ,Peak current ,Slot antenna ,Antenna (radio) ,business - Abstract
We demonstrated the operation of GaInAs/AlAs resonant tunneling diode (RTD) oscillators with high output power (100–200 µW) at frequencies of 430–460 GHz using an offset-fed slot antenna, in which the RTD was placed 45 µm from the center of a 100-µm-long antenna. The highest output power obtained in this study was 200 µW at 443 GHz for a single RTD with a peak current density of 18 mA/µm2. The output powers of 50–130 µW at frequencies of 460–490 GHz were also obtained in the oscillators with different structure. Higher output is expected by optimizing the position and mesa area of the RTD and the antenna length.
- Published
- 2010
- Full Text
- View/download PDF
5. Heterodyne detection of output of sub-THz RTD oscillator using InP-SBD detector and RTD local oscillator
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M. Shiraishi, Masahiro Asada, Safumi Suzuki, K. Hinata, and K. Karashima
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Physics ,business.industry ,Terahertz radiation ,Local oscillator ,Superheterodyne receiver ,Detector ,Resonant-tunneling diode ,law.invention ,Vackář oscillator ,Laser linewidth ,law ,Optoelectronics ,Heterodyne detection ,business - Abstract
We report on detection of output power from an RTD oscillator using a heterodyne receiver composed of an InP-SBD and an RTD local oscillator at around 430 GHz. Spectral linewidth of the RTD oscillators was estimated from the detected signal.
- Published
- 2010
6. High power THz oscillators with offset-fed slot antenna and high current density resonant tunneling diodes
- Author
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Masahiro Asada, K. Hinata, M. Shiraishi, and Safumi Suzuki
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Physics ,Offset (computer science) ,business.industry ,Oscillation ,Terahertz radiation ,Impedance matching ,Resonant-tunneling diode ,Optoelectronics ,Slot antenna ,business ,Current density ,Diode - Abstract
We report experimental and theoretical results on the increase in output power of resonant tunneling diode (RTD) oscillators in sub-terahertz (THz) range with an offset-fed slot antenna and high current density. Theoretical analysis shows that the oscillation frequency increases with an offset from the center of the slot antenna. Output power also increases with the offset up to the point of the best impedance matching. As the result of calculation, the oscillation at 600 GHz with the output power of 610 μW is expected for a single RTD with high peak current density (18 mA/μm2) and an offset structure. In a preliminary experiment, an output power of 150 μW was obtained at 271 GHz with peak current density of 7 mA/μm2.
- Published
- 2009
- Full Text
- View/download PDF
7. Fundamental oscillation up TO 831 GHz in GaInAs/AlAs resonant tunneling diode
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H. Yokoyama, Hiroki Sugiyama, Atsushi Teranishi, Masahiro Asada, K. Hinata, and Safumi Suzuki
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Materials science ,business.industry ,Oscillation ,Resonant-tunneling diode ,Capacitance ,chemistry.chemical_compound ,chemistry ,Indium phosphide ,Optoelectronics ,business ,Current density ,Quantum tunnelling ,Diode ,Common emitter - Abstract
A fundamental oscillation of up to 831 GHz was observed at room temperature in GaInAs/AlAs resonant tunneling diodes integrated with planar slot antennas. The thickness of the collector spacer layer was optimized (20 nm) and the mesa area (≪1 µm2) was reduced in order to reduce the resonant tunneling diode capacitance. Reduction in the negative differential conductance in the small mesa area was prevented by increasing the emitter doping concentration (3 × 1018 cm−3) which resulted in an ultra-high peak current density (18 mA/µm2) with a peak-to-valley current ratio of 2. The dependence of oscillation frequency on the mesa area was also studied. The output power was at least 1 µW.
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- 2009
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8. Abstracts of Posters Presentations
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T. E. Bureau, G. S. Khush, S. R. Wessler, A. S. Reddy, F. Cordesse, M. Delseny, A. Kanno, K. Hattori, A. Hirai, Y. Sano, R. Sano, H. -Y. Hirano, T. Ishii, T. Terachi, N. Mori, K. Tsunewaki, J. P. Gustafson, C. L. Mclntyre, J. E. Dillé, Jinshui Yang, Koulin Ge, Yunzhu Wang, C. C. Tan, Shanbao Chen, Xiaolan Duan, Changsheng Yan, Guandang Xing, Yan Zhang, B. Wang, H. G. Zheng, Q. F. Xu, J. Z. Wang, D. D. Li, S. T. Li, Z. T. Zhang, O. Panaud, G. Magpantay, E. Galinato, D. Mahapatra, L. A. Sitch, S. Yoshimura, A. Yoshimura, N. Iwata, A. Saito, N. Kishimoto, M. Kawase, M. Nakagahra, M. Yano, N. Mitsukawa, K. Tanaka, E. C. Cocking, S. L. Kothari, H. Zhang, P. T. Lynch, P. S. Eyles, E. L. Rech, M. R. Davey, I. H. Slamet, R. P. Finch, K. -I. Mori, T. Kinoshita, A. Tanaka, S. Tano, A. B. Mendoza, Y. Futsuhara, Y. Takeoka, Wang Zixuan, E. Guiderdoni, P. B. Kavi Kishor, G. M. Reddy, N. R. Yadav, D. R. Sharma, J. B. Chowdhury, Jiadao Wu, Zhongxiang Huang, Zuling Liu, Leya Zheng, Jianbo Yan, Yan Chen, K. Fukui, K. Iijima, H. Fukuoka, Y. Kageyama, K. Yamamoto, G. Takeda, I. Imuta, F. Kikuchi, I. Watanabe, M. Yusa, O. Kamijima, H. Kitano, Y. Nagato, S. Kikuchi, H. Satoh, I. Takamure, S. Oba, M. Ichii, Shui Shan Li, H. Hasegawa, A. Matsuzaki, T. Takano, T. Kato, D. A. Vaughan, K. K. Jena, D. S. Multani, A. Ghesquiere, P. Barbier, A. Ishihama, A. A. Flores-Nimedez, K. Dörffling, B. S. Vergara, T. Nagamine, K. Watanabe, T. Nishimura, T. Ogawa, R. E. Tabien, T. Yamamoto, G. A. Busto, R. Ikeda, C. Hamamatsu, Y. -I. Sato, H. Morishima, J. Abadassi, J. C. Glaszmann, J. L. Notteghem, B. Courtois, O. Mohamad, M. Z. Abdullah, O. Othman, K. Hadzim, J. Mahmud, O. Ramli, J. L. Minocha, J. S. Sidhu, R. K. Gupta, H. Sano, S. Youssefian, I. Kamada, M. Itoh, M. T. Mei, Q. F. Zuo, Y. G. Lu, H. Deng, T. C. Yang, T. Tanisaka, H. Yamagata, B. Mishra, J. P. Tilquin, J. P. Chapeaux, J. F. Detry, Yi-Shin Chen, Chia-Yi Aes, Bui Chi Buu, Thai Thi Hanh, Minghong Gu, Aiqing You, Xuebiao Pan, Zu-bai Qi, Ye-Tong Cai, Bao-jian Li, T. Nomura, K. Yonezawa, T. Sato, N. Watanabe, R. B. Austin, C. L. Morgan, Y. Okumoto, Y. Shimamoto, Shih-Cheng Lin, K. Hinata, M. Oka, M. P. Pandey, D. V. Seshu, M. Akbar, Moo Young Eun, Yong Gu Cho, Yong Kwon Kim, Tae Young Chung, Gun-Sik Chung, Sae-Jun Yang, Byeong-Geun Oh, G. L. Shrestha, S. Mallik, A. M. Aguilar, G. Kochert, and I. Nakamura
- Published
- 2008
- Full Text
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9. Dissipation current and electroluminescence of LDPE/MgO nanocomposite material under trapezoidal waveforms application
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Y. Sekiguchi, Yoshinao Murata, K. Hinata, A. Fujita, and Kazuyuki Tohyama
- Subjects
Low-density polyethylene ,Nanocomposite ,Materials science ,Nanoparticle ,Waveform ,Power cable ,Dielectric ,Dissipation ,Electroluminescence ,Composite material - Abstract
Low density polyethylene (LDPE) is widely used as a dielectric insulation of power cable. It has already reported that an incorporation of MgO nanoparticles in LDPE matrix could provide dielectrics with new and improved properties under dc high field. However under ac high field, it has already reported that the effect of the addition of MgO nanoparticles was relatively small compared with that under dc high field. This paper describes the dissipation current waveform and the electroluminescence (EL) of LDPE/MgO nanocomposite material under the high field trapezoidal waveform application by using the simultaneous observation system. From the results of experiments, the EL image and the relation between the dissipation current and the EL under high field trapezoidal waveform application were introduced.
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- 2007
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10. Dielectric Properties of LDPE/MgO Nanocomposite Material under AC High Field
- Author
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Kazuyuki Tohyama, A. Fujita, Y. Murata, and K. Hinata
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Permittivity ,Low-density polyethylene ,Materials science ,Nanocomposite ,Electrical resistivity and conductivity ,Relative permittivity ,Nanoparticle ,High voltage ,Dielectric ,Composite material - Abstract
Low density polyethylene (LDPE) is widely used as a dielectric insulation of power cable. It has already reported that an incorporation of MgO nano particles in LDPE matrix could provide dielectrics with new and improved properties under dc high field. This paper describes high field dielectric properties of LDPE/MgO nano composite material under ac high voltage application. From the results of dissipation current waveform observations under ac high field, the volume resistivity and the relative permittivity for various contents of MgO nano particles in LDPE were estimated at the applied frequency 50 and 200 Hz. Though, the dependences of MgO content on both volume resistivity and relative permittivity under ac high field at 50 and 200 Hz are recognized, but it seems not to be drastically improved by adding a few percent of nano-size filler like those under dc high field.
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- 2006
- Full Text
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11. Spin-on dielectric stack low-k integration with EB curing technology for 45nm-node and beyond
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M. Muramatsu, K. Hinata, H. Nagano, Koji Mishima, M. Kodera, A. Shiota, T. Kokubo, Hiroyuki Nagai, K. Kubota, M. Iwashita, M. Hattori, K. Tokushige, and Kaoru Maekawa
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Materials science ,business.industry ,Copper interconnect ,Dielectric ,STRIPS ,law.invention ,Resist ,law ,Thermal ,Cathode ray ,Electronic engineering ,Optoelectronics ,Adhesive ,business ,Curing (chemistry) - Abstract
To achieve effective k value less than 3.0, we investigated spin-on dielectric stack damascene integration scheme with electron beam (EM) cure. By using porous-MSQ (k=2.3) as ILD and dense-MSQ (k=2.9) as hard mask (HM), effective k value could be lowered, and by EB curing the full dielectric stack only once, mechanical strength for both ILD and HM were improved and a reduced thermal budget was obtained. In addition, a low damage resist strip process for the low-k materials was evaluated. These elements of BEOL technology have applicability to 45nm technology node and beyond.
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- 2004
- Full Text
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12. The S receptor kinase gene determines dominance relationships in stigma expression of self-incompatibility in Brassica
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K, Hatakeyama, T, Takasaki, G, Suzuki, T, Nishio, M, Watanabe, A, Isogai, and K, Hinata
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Genotype ,Reverse Transcriptase Polymerase Chain Reaction ,Reproduction ,Brassica ,Blotting, Northern ,Phenotype ,Haplotypes ,Gene Expression Regulation, Plant ,Pollen ,RNA, Messenger ,Transgenes ,Plant Structures ,Protein Kinases ,Crosses, Genetic ,Genes, Dominant ,Plant Proteins - Abstract
Self-incompatibility (SI) in Brassica is sporophytically controlled by the multi-allelic S locus. SI phenotypes of the stigma and pollen in an S heterozygote are determined by the two S haplotypes it carries; the two haplotypes may be co-dominant or exhibit a dominant/recessive relationship. Because the S receptor kinase (SRK) gene of the S locus was recently shown to determine the S haplotype specificity of the stigma, we wished to investigate whether SRK also plays a role in the dominance relationships between S haplotypes. We crossed plants carrying an SRK28 transgene with plants homozygous for one of five S haplotypes that are either co-dominant with, or recessive to, S28 haplotype in the stigma, and analyzed the SI phenotypes of the progeny. In all cases, the SI phenotype of the stigma of plants carrying the SRK28 transgene could be predicted by the known dominance relationships between the S haplotype(s) and the S28 haplotype. Moreover, in the S43 homozygote carrying the SRK28 transgene where the S43 phenotype in the stigma was masked by the presence of the SRK28, the transcript level of SRK28 was found to be much lower than that of SRK43. All these results suggest that the dominance relationships between S haplotypes in the stigma are determined by SRK, but not by virtue of its relative expression level.
- Published
- 2001
13. Nuclear factor kappaB subunits induce epithelial cell growth arrest
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C S, Seitz, H, Deng, K, Hinata, Q, Lin, and P A, Khavari
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Cyclin-Dependent Kinase Inhibitor p21 ,Hyperplasia ,Cell Cycle ,NF-kappa B ,Epithelial Cells ,Mice, Transgenic ,Growth Inhibitors ,Mice, Inbred C57BL ,Mice ,Cyclins ,Animals ,Humans ,Cell Division ,Cells, Cultured ,Skin - Abstract
Nuclear factor kappaB (NF-kappaB) gene-regulatory proteins play important roles in inflammation, neoplasia, and programmed cell death. Recently, blockade of NF-kappaB function has been shown to result in epithelial hyperplasia, suggesting a potential role for NF-kappaB in negative growth regulation. We expressed active NF-kappaB subunits in normal epithelial cells and found that NF-kappaB profoundly inhibits cell cycle progression. This growth inhibition is resistant to mitogenic stimuli and is accompanied by other features of irreversible growth arrest. NF-kappaB-triggered cell cycle arrest is also associated with selective induction of the cyclin-dependent kinase inhibitor p21CiP1, with overexpression of p21(Cip1) alone inducing findings similar to those seen with NF-kappaB in vitro. An active NF-kappaB subunit expressed in the epidermis of p21(CiP1-/- mice, however, displays only partial growth-inhibitory effects, suggesting that full NF-kappaB growth inhibition is only partially p21(Cip1) dependent in this setting. These data indicate that NF-kappaB can trigger cell cycle arrest in epithelial cells in association with selective induction of a cell cycle inhibitor.
- Published
- 2000
14. Introduction of SLG (S locus glycoprotein) alters the phenotype of endogenous S haplotype, but confers no new S haplotype specificity in Brassica rapa L
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T, Takasaki, K, Hatakeyama, M, Watanabe, K, Toriyama, A, Isogai, and K, Hinata
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Blotting, Southern ,Phenotype ,Transformation, Genetic ,DNA, Plant ,Genotype ,Haplotypes ,Transcription, Genetic ,RNA, Plant ,Brassica ,Cloning, Molecular ,Plants, Genetically Modified ,Glycoproteins ,Plant Proteins - Abstract
Self-incompatibility (SI) in Brassicaceae is genetically controlled by the S locus complex in which S locus glycoprotein (SLG) and S receptor kinase (SRK) genes have been identified, and these two genes encoding stigma proteins are believed to play important roles in SI recognition reaction. Here we introduced the SLG43 gene of Brassica rapa into a self-incompatible cultivar, Osome, of B. rapa, and examined the effect of this transgene on the SI behavior of the transgenic plants. Preliminary pollination experiments demonstrated that Osome carried S52 and S60, and both were codominant in stigma, but S52 was dominant to S60 in pollen. S43 was found to be recessive to S52 and codominant with S60 in stigma. The nucleotide sequence of SLG43 was more similar to that of SLG52 (87.8% identity) than to that of SLG60 (74.8% identity). Three of the ten primary transformants (designated No. 1 to No. 10) were either completely (No. 9) or partially (No. 6 and No. 7) self-compatible; the SI phenotype of the stigma was changed from S52S60 to S60, but the SI phenotype of the pollen was not altered. In these three plants, the mRNA and protein levels of both SLG43 and SLG52 were reduced, whereas those of SLG60 were not. All the plants in the selfed progeny of No. 9 and No. 6 regained SI and they produced a normal level of SLG52. These results suggest that the alteration of the SI phenotype of the stigma in the transformants Nos. 6, 7, and 9 was the result of specific co-suppression between the SLG43 transgene and the endogenous SLG52 gene. Three of the transformants (Nos. 5, 8 and 10) produced SLG43 protein, but their SI phenotype was not altered. The S60 homozygotes in the selfed progeny of No. 10 which produced the highest level of SLG43 were studied because S43 was codominant with S60 in the stigma. They produced SLG43 at approximately the same level as did S43S60 heterozygotes, but did not show S43 haplotype specificity at the stigma side. We conclude that SLG is necessary for the expression of the S haplotype specificity in the stigma but the introduction of SLG alone is not sufficient for conferring a novel S haplotype specificity to the stigma.
- Published
- 1999
15. Striking sequence similarity in inter- and intra-specific comparisons of class I SLG alleles from Brassica oleracea and Brassica campestris: implications for the evolution and recognition mechanism
- Author
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M, Kusaba, T, Nishio, Y, Satta, K, Hinata, and D, Ockendon
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Molecular Sequence Data ,food and beverages ,Amino Acid Sequence ,Brassica ,Biological Sciences ,Genes, Plant ,Sequence Alignment ,Sequence Analysis ,Alleles ,Glycoproteins ,Plant Proteins - Abstract
Self-incompatibility in Brassica is controlled by a single multi-allelic locus (S locus), which contains at least two highly polymorphic genes expressed in the stigma: an S glycoprotein gene (SLG) and an S receptor kinase gene (SRK). The putative ligand-binding domain of SRK exhibits high homology to the secretory protein SLG, and it is believed that SLG and SRK form an active receptor kinase complex with a self-pollen ligand, which leads to the rejection of self-pollen. Here, we report 31 novel SLG sequences of Brassica oleracea and Brassica campestris. Sequence comparisons of a large number of SLG alleles and SLG-related genes revealed the following points. (i) The striking sequence similarity observed in an inter-specific comparison (95.6% identity between SLG14 of B. oleracea and SLG25 of B. campestris in deduced amino acid sequence) suggests that SLG diversification predates speciation. (ii) A perfect match of the sequences in hypervariable regions, which are thought to determine S specificity in an intra-specific comparison (SLG8 and SLG46 of B. campestris) and the observation that the hypervariable regions of SLG and SRK of the same S haplotype were not necessarily highly similar suggests that SLG and SRK bind different sites of the pollen ligand and that they together determine S specificity. (iii) Comparison of the hypervariable regions of SLG alleles suggests that intragenic recombination, together with point mutations, has contributed to the generation of the high level of sequence variation in SLG alleles. Models for the evolution of SLG/SRK are presented.
- Published
- 1997
16. Highly conserved 5'-flanking regions of two self-incompatibility genes, SLG9 and SRK9
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G, Suzuki, M, Watanabe, A, Isogai, and K, Hinata
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Evolution, Molecular ,Base Sequence ,DNA, Plant ,Sequence Homology, Nucleic Acid ,Molecular Sequence Data ,Brassica ,Protein Kinases ,Conserved Sequence ,Glycoproteins ,Plant Proteins - Abstract
The nucleotide (nt) sequences of the 5'-flanking regions of two Brassica self-incompatibility genes, SLG9 and SRK9, were determined. Their sequences were highly conserved: a region spanning 1.9 kb in the 5'-flanking region was completely identical except for a 1319-bp segment in SLG9. These observations strongly suggest that SLG9 and SRK9 together with their promoter regions were involved in a gene duplication or conversion event which occurred before the 1319-bp SLG9-specific sequence was inserted in SLG9 or deleted in SRK9.
- Published
- 1997
17. Molecular cloning of members of the S-multigene family in self-incompatible Brassica campestris L
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G, Suzuki, M, Watanabe, K, Toriyama, A, Isogai, and K, Hinata
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Genomic Library ,Base Sequence ,DNA, Plant ,Multigene Family ,Molecular Sequence Data ,Brassica ,Cloning, Molecular ,Genes, Plant ,Protein Kinases ,Glycoproteins ,Plant Proteins - Abstract
We isolated 12 groups of genomic clones that contained SLG-homologous regions from a genomic library constructed from an S9 homozygote of self-incompatible Brassica campestris. Both SLG9 and SRK9 genomic clones, which are located within the self-incompatibility (S) locus, were included in these groups. The promoter regions of SLG9 and SRK9 were completely identical for at least 200 bp upstream from their respective initiation codons (ATG). The five sequence elements (boxes I to V) that are conserved in the promoters of SLG and SRK genes were also found in the SLG9 and SRK9 clones. However, one conserved element (box III) unexpectedly lacked 7 of 11 bp, although box III has been considered necessary for expression in pistil. The other ten groups of genomic clones were classified into six SRK-like groups and four SLG-like groups. These results indicate that SLG, SRK, SLG-like, and SRK-like genes form a large S-multigene family in B. campestris.
- Published
- 1995
18. [Evolution of self-incompatibility in angiosperms]
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K, Hinata, M, Watanabe, Y, Satta, and A, Isogai
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Ribonucleases ,Molecular Sequence Data ,Amino Acid Sequence ,Plants ,Selection, Genetic ,Genes, Plant ,Biological Evolution ,Alleles - Published
- 1994
19. The cDNA sequence of NS3-glycoprotein from Brassica campestris and its homology to related proteins
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S, Yamakawa, M, Watanabe, A, Isogai, S, Takayama, S, Satoh, K, Hinata, and A, Suzuki
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DNA, Complementary ,Base Sequence ,Sequence Homology, Amino Acid ,Molecular Sequence Data ,Amino Acid Sequence ,Brassica ,Cloning, Molecular ,Glycoproteins ,Plant Proteins - Abstract
A cDNA clone encoding NS3-glycoprotein was isolated from stigmas of Brassica campestris. NS-glycoproteins correspond to the SLR1-glycoproteins of B. oleracea and are highly conserved within the species. These data suggest that the NS-glycoproteins may play a role in discrimination between species in the fertilization system of Brassica.
- Published
- 1993
20. [Self-incompatibility in higher plants]
- Author
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M, Watanabe, T, Takasaki, A, Isogai, and K, Hinata
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Ribonucleases ,Molecular Sequence Data ,Pollen ,Amino Acid Sequence ,DNA ,Cloning, Molecular ,Plants ,Genes, Plant ,Alleles ,Plant Physiological Phenomena ,Glycoproteins ,Signal Transduction - Published
- 1992
21. Production of Somatic Hybrid Plants, ‘Brassicomoricandia’, Through Protoplast Fusion between Moricandia Arvensis and Brassica Oleracea
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K. Hinata, K. Toriyama, T. Kameya, and R. Ishii
- Published
- 1988
- Full Text
- View/download PDF
22. Selection of a Universal Hybridizer in Sinapis Turgida Del. and Regeneration of Plantlets from Somatic Hybrids with Brassica Species
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K. Toriyama, T. Kameya, and K. Hinata
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- 1988
- Full Text
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23. Comparative Studies on S-Glycoproteins Purified from Different S-Genotypes in Self-Incompatible BRASSICA Species I. Purification and Chemical Properties
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T, Nishio and K, Hinata
- Subjects
Investigations - Abstract
S-glycoproteins, i.e. stigma glycoproteins that are heritable in correlation with S allele in self-incompatible Brassica species, were apparently purified for three S alleles in B. oleracea. From SDS gel electrophoresis, the estimated molecular weight for two of the S-glycoproteins was 57,000. The other S-glycoprotein was considered to be heterogeneous with molecular weights of 60,000 and 65,000. Distinct differences in amino acid content were found; in general, cysteine, methionine and histidine were low, and serine, glutamate, glycine, leucine, arginine and aspartate were high and variable between the S-glycoproteins. Differences in the isoelectric point were mainly attributed to the amino acid composition of each S-glycoprotein.
- Published
- 1982
24. Role of Stigma in the Expression of Self-incompatibility in Crucifers in View of Genetic Analysis
- Author
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K. Hinata and K. Okazaki
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Genetics ,biology ,Brassica oleracea ,Allele ,biology.organism_classification ,Gene ,Test cross ,Genetic analysis ,Stigma (anatomy) - Abstract
A number of contributions on the genetics of self-compatibility vs. -incompatibility in Crucifers may suggest that there are two cases for the appearance of self-compatible plants in self-incompatible ones. The first is due to the changes or the interactions of S alleles (Bateman 1954, Sampson 1957, Thompson and Taylor 1966, Zuberi et al 1981), and the second is that self-compatibility is ascribed to genes different from S alleles (Murakami 1965, Thompson and Taylor 1971, Nasrallah 1974, Hinata et al 1983).
- Published
- 1986
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25. Egg Plant (Solanum melongena L.)
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K. Hinata
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Melongena ,biology ,Agriculture ,business.industry ,Botany ,language ,Solanum ,biology.organism_classification ,business ,Sanskrit ,China ,Genus Solanum ,language.human_language - Abstract
Egg plant (Solanum melongena L.), also known as brinjal is probably a native of southern Asia, while in general the genus Solanum is predominant in the New World. There are Sanskrit names for it in a book that was probably written in between the 3rd century B. C. and the 3rd century A. D. (Kahn 1979). Its cultivation was known in the area ranging from China to Persia by the 5th century, and it was not known in Europe until the 13th century (Hedrick 1972).
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- 1986
- Full Text
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26. Brassica Crops and Wild Allies. Biology and Breeding
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Reed C. Rollins, S. Tsunoda, K. Hinata, and C. Gomez-Campo
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business.industry ,Agriculture ,Brassica ,Plant Science ,Biology ,business ,biology.organism_classification ,Biotechnology - Published
- 1981
- Full Text
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27. In utero tumor development and identification of CTNNB1 mutation in a newborn case of ossifying renal tumor of infancy.
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Kasai S, Tamai M, Sugihara E, Oishi N, Hinata K, Akahane K, Goi K, Hata Y, Kondo T, Mitsui T, Tanaka M, and Inukai T
- Subjects
- Infant, Newborn, Humans, Mutation, beta Catenin genetics, Kidney Neoplasms genetics
- Published
- 2024
- Full Text
- View/download PDF
28. Structure of an actin-related subcomplex of the SWI/SNF chromatin remodeler.
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Schubert HL, Wittmeyer J, Kasten MM, Hinata K, Rawling DC, Héroux A, Cairns BR, and Hill CP
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- Animals, Chromosomal Proteins, Non-Histone metabolism, Crystallography, X-Ray, Drosophila melanogaster metabolism, Microfilament Proteins metabolism, Models, Molecular, Multiprotein Complexes metabolism, Nucleosomes metabolism, Protein Binding, Protein Multimerization, Protein Structure, Tertiary, Saccharomyces cerevisiae cytology, Saccharomyces cerevisiae Proteins metabolism, Transcription Factors metabolism, Actins metabolism, Chromatin Assembly and Disassembly, Chromosomal Proteins, Non-Histone chemistry, Microfilament Proteins chemistry, Multiprotein Complexes chemistry, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins chemistry, Transcription Factors chemistry
- Abstract
The packaging of DNA into nucleosomal structures limits access for templated processes such as transcription and DNA repair. The repositioning or ejection of nucleosomes is therefore critically important for regulated events, including gene expression. This activity is provided by chromatin remodeling complexes, or remodelers, which are typically large, multisubunit complexes that use an ATPase subunit to translocate the DNA. Many remodelers contain pairs or multimers of actin-related proteins (ARPs) that contact the helicase-SANT-associated (HSA) domain within the catalytic ATPase subunit and are thought to regulate ATPase activity. Here, we determined the structure of a four-protein subcomplex within the SWI/SNF remodeler that comprises the Snf2 HSA domain, Arp7, Arp9, and repressor of Ty1 transposition, gene 102 (Rtt102). Surprisingly, unlike characterized actin-actin associations, the two ARPs pack like spoons and straddle the HSA domain, which forms a 92-Å-long helix. The ARP-HSA interactions are reminiscent of contacts between actin and many binding partners and are quite different from those in the Arp2/3 complex. Rtt102 wraps around one side of the complex in a highly extended conformation that contacts both ARPs and therefore stabilizes the complex, yet functions to reduce by ∼2.4-fold the remodeling and ATPase activity of complexes containing the Snf2 ATPase domain. Thus, our structure provides a foundation for developing models of remodeler function, including mechanisms of coupling between ARPs and the ATPase translocation activity.
- Published
- 2013
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29. The HSA domain binds nuclear actin-related proteins to regulate chromatin-remodeling ATPases.
- Author
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Szerlong H, Hinata K, Viswanathan R, Erdjument-Bromage H, Tempst P, and Cairns BR
- Subjects
- Actins chemistry, Amino Acid Sequence, Cytoskeletal Proteins chemistry, Molecular Sequence Data, Protein Structure, Tertiary, Saccharomyces cerevisiae chemistry, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins chemistry, Sequence Alignment, Actins metabolism, Adenosine Triphosphatases metabolism, Chromatin metabolism, Chromatin Assembly and Disassembly, Cytoskeletal Proteins metabolism, Saccharomyces cerevisiae Proteins metabolism
- Abstract
We identify the helicase-SANT-associated (HSA) domain as the primary binding platform for nuclear actin-related proteins (ARPs) and actin. Individual HSA domains from chromatin remodelers (RSC, yeast SWI-SNF, human SWI-SNF, SWR1 and INO80) or modifiers (NuA4) reconstitute their respective ARP-ARP or ARP-actin modules. In RSC, the HSA domain resides on the catalytic ATPase subunit Sth1. The Sth1 HSA is essential in vivo, and its omission causes the specific loss of ARPs and a moderate reduction in ATPase activity. Genetic selections for arp suppressors yielded specific gain-of-function mutations in two new domains in Sth1, the post-HSA domain and protrusion 1, which are essential for RSC function in vivo but not ARP association. Taken together, we define the role of the HSA domain and provide evidence for a regulatory relationship involving the ARP-HSA module and two new functional domains conserved in remodeler ATPases that contain ARPs.
- Published
- 2008
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- View/download PDF
30. Bisexual sterility conferred by the differential expression of barnase and barstar: a simple and efficient method of transgene containment.
- Author
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Kobayashi K, Munemura I, Hinata K, and Yamamura S
- Subjects
- Arabidopsis, Blotting, Southern, Cell Survival, Flowers cytology, Phenotype, Plants, Genetically Modified, Seeds metabolism, Nicotiana genetics, Transformation, Genetic, Bacterial Proteins genetics, Containment of Biohazards methods, Gene Expression, Plant Infertility physiology, Ribonucleases genetics, Transgenes
- Abstract
To establish a simple and an efficient system to minimize the environmental risk of genetically modified plants, we tested the applicability of the barnase/barstar system in conferring bisexual sterility; that is, in preventing plants setting seeds by self-fertilization and out-crossing. Transgenic tobacco plants were generated to express barnase, a cell death inducing ribonuclease, under the control of the gamete-specific AtDMC1 promoter, and barstar, a specific inhibitor of barnase, under the control of the ACT2 promoter, which is constitutively active in almost all tissues except gametes. In contrast to control plants harboring the barstar expression unit only, which set seeds normally with self-pollination, all transformants harboring both barnase and barstar were bisexually sterile. They produced aberrant anthers containing no detectable pollen and failed to set seeds even after pollination with wild-type tobacco pollen.
- Published
- 2006
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31. Disruption of the novel plant protein NEF1 affects lipid accumulation in the plastids of the tapetum and exine formation of pollen, resulting in male sterility in Arabidopsis thaliana.
- Author
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Ariizumi T, Hatakeyama K, Hinata K, Inatsugi R, Nishida I, Sato S, Kato T, Tabata S, and Toriyama K
- Subjects
- Arabidopsis growth & development, Chloroplasts ultrastructure, Flowers growth & development, Gene Expression Regulation, Plant, Genetic Complementation Test, Mutation, Phenotype, Plastids ultrastructure, Pollen genetics, Pollen growth & development, Pollen ultrastructure, Arabidopsis genetics, Arabidopsis Proteins genetics, Lipid Metabolism, Plastids metabolism
- Abstract
A novel male-sterile mutant of Arabidopsis thaliana was isolated by means of T-DNA tagging. Pollen abortion of the mutant was evident after microspore release, and pollen grains were completely absent at anthesis. Transmission electron microscope analysis revealed that primexine was coarsely developed, and that although sporopollenin was produced, it was not deposited onto the microspore plasma membrane. The sporopollenin that failed to be deposited aggregated and accumulated within the locule and on the locule wall. Finally, as no exine formation was observed, the mutant was named nef1. The plastoglobuli within the plastids of the tapetum were reduced, and lipid accumulation was considerably decreased. The mutant had a significantly altered leaf chloroplast ultrastructure and showed various growth defects. Lipid analysis revealed that the total lipid content in nef1 was lower than that in the wild type, which indicated that Nef1 was involved in lipid metabolism. Cloning of the full-length Nef1 indicated that the gene encodes a novel plant protein of 1123 amino acids with limited sequence similarities to membrane proteins or transporter-like proteins, and the NEF1 is predicted to be a plastid integral membrane protein. Motif analysis revealed that NEF1 contains prokaryotic membrane lipoprotein lipid attachment sites that are involved in maintaining cell envelope integrity. It is predicted that the Nef1 encodes a membrane protein that maintains the envelope integrity in the plastids.
- Published
- 2004
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32. A novel male-sterile mutant of Arabidopsis thaliana, faceless pollen-1, produces pollen with a smooth surface and an acetolysis-sensitive exine.
- Author
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Ariizumi T, Hatakeyama K, Hinata K, Sato S, Kato T, Tabata S, and Toriyama K
- Subjects
- Acetic Acid pharmacology, Arabidopsis growth & development, Arabidopsis metabolism, Cloning, Molecular, DNA, Complementary chemistry, DNA, Complementary genetics, Fertility genetics, Gene Expression Regulation, Plant, Genetic Complementation Test, Humidity, Lipid Metabolism, Lipids, Microscopy, Electron, Microscopy, Electron, Scanning, Molecular Sequence Data, Plant Stems genetics, Plant Stems metabolism, Pollen drug effects, Pollen ultrastructure, Sequence Analysis, DNA, Waxes metabolism, Arabidopsis genetics, Arabidopsis Proteins genetics, Mutation, Pollen growth & development
- Abstract
A mutant exhibiting conditional male sterility, in which fertility was restored under conditions of high humidity, was identified in T-DNA tagged lines of Arabidopsis thaliana. Scanning electron microscopy (SEM) demonstrated that the pollen surface was almost smooth and the reticulate pattern not prominent. Thus, the mutant was named faceless pollen-1 (flp1). Transmission electron microscopy (TEM) revealed that the smooth appearance was due to tryphine filling in the exine cavities and covering the pollen surface. The lipid droplets in the tryphine of mutant pollen were smaller and more numerous than those of the wild type. SEM analysis also demonstrated that pollen exine was easily damaged by acetolysis, suggesting that a component of exine, sporopollenin, was defective in the mutant. In addition, the stems and siliques had reduced amounts of wax crystals. A predicted amino acid sequence of the cDNA that corresponded to the tagged gene, fip1, showed sequence similarity to proteins involved in wax biosynthesis. The FLP1 protein is likely to play a role in the synthesis of the components of tryphine, sporopollenin of exine and the wax of stems and siliques.
- Published
- 2003
- Full Text
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33. Divergent gene regulation and growth effects by NF-kappa B in epithelial and mesenchymal cells of human skin.
- Author
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Hinata K, Gervin AM, Jennifer Zhang Y, and Khavari PA
- Subjects
- Apoptosis genetics, Cell Division drug effects, Cell Lineage, Cyclin-Dependent Kinase Inhibitor p21, Cyclins biosynthesis, Cyclins genetics, Epithelial Cells metabolism, Fibroblasts cytology, Gene Expression Profiling, Humans, I-kappa B Proteins genetics, I-kappa B Proteins physiology, Inflammation genetics, Keratinocytes cytology, Mesoderm cytology, Mesoderm metabolism, Metallothionein 3, NF-KappaB Inhibitor alpha, NF-kappa B genetics, Nerve Tissue Proteins biosynthesis, Nerve Tissue Proteins genetics, Organ Specificity, Recombinant Fusion Proteins physiology, Skin metabolism, Transcription, Genetic, Transcriptional Activation, Fibroblasts metabolism, Gene Expression Regulation, Keratinocytes metabolism, NF-kappa B physiology, Skin cytology
- Abstract
NF-kappa B regulates normal and pathological processes, including neoplasia, in a tissue-context-dependent manner. In skin, NF-kappa B is implicated in epidermal homeostasis as well as in the pathogenesis of squamous cell carcinoma; however, its function in the underlying mesenchymal dermis has been unclear. To gain insight into NF-kappa B roles in these two adjacent cutaneous tissue compartments, NF-kappa B effects on expression of 12 435 genes were determined in epidermal keratinocytes and dermal fibroblasts. Although NF-kappa B induced proinflammatory and antiapoptotic genes in both settings, it exhibited divergent effects on growth regulatory genes. In keratinocytes, but not in fibroblasts, NF-kappa B induced p21(CIP1), which was sufficient to inhibit growth of both cell types. Levels of growth inhibitory factor (GIF), in contrast, were increased by NF-kappa B in both settings but inhibited growth only in keratinocytes. These findings indicate that transcription factors such as NF-kappa B can program tissue-selective effects via both differential target gene induction as well as by inducing common targets that exert differing effects depending on cellular lineage.
- Published
- 2003
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- View/download PDF
34. Characterization of expressed genes in the SLL2 region of self-compatible Arabidopsis thaliana.
- Author
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Takada Y, Ito A, Ninomiya C, Kakizaki T, Takahata Y, Suzuki G, Hatakeyama K, Hinata K, Shiba H, Takayama S, Isogai A, and Watanabe M
- Subjects
- Evolution, Molecular, Sequence Analysis, DNA, Arabidopsis genetics, Genes, Plant, Glycoproteins genetics, Plant Proteins genetics
- Abstract
Self-incompatibility in Brassica species is regulated by a set of S-locus genes: SLG, SRK, and SP11/SCR. In the vicinity of the S-locus genes, several expressed genes, SLL2 and SP2/ClpP, etc., were identified in B. campestris. Arabidopsis thaliana is a self-compatible Brassica relative, and its complete genome has been sequenced. From comparison of the genomic sequences between B. campestris and A. thaliana, microsynteny between gene clusters of Arabidopsis and Brassica SLL2 regions was observed, though the S-locus genes, SLG, SRK, and SP11/SCR were not found in the region of Arabidopsis. Almost all genes predicted in this region of Arabidopsis were expressed in both vegetative and reproductive organs, suggesting that the genes in the SLL2 region might not be related to self-incompatibility. Considering the recent speculation that the S-locus genes were translocated as a single unit between Arabidopsis and Brassica, the translocation might have occurred in the region between the SLL2 and SP7 genes.
- Published
- 2001
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35. Molecular aspects of self-incompatibility in Brassica species.
- Author
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Watanabe M, Hatakeyama K, Takada Y, and Hinata K
- Subjects
- Brassica genetics, Brassica physiology, Evolution, Molecular, Genes, Plant, Glycoproteins genetics, Plant Proteins genetics, Protein Kinases genetics, Glycoproteins physiology, Plant Proteins physiology, Protein Kinases physiology
- Abstract
Many flowering plants possess self-incompatibility (SI) systems to prevent inbreeding. SI in Brassica species is controlled by a single S locus with multiple alleles. In recent years, much progress has been made in determining the male and female S determinant in Brassica species. In the female, a gain-of-function experiment clearly demonstrated that SRK was the sole S determinant, and that SLG enhanced the SI recognition process. By contrast, the male S determinant (termed SP11/SCR) was identified in the course of genome analysis of S locus to be a small cysteine-rich protein, which was classified as a pollen coat protein. This SP11/SCR may function as a ligand for the S domain of SRK in the SI recognition reaction of Brassica species.
- Published
- 2001
- Full Text
- View/download PDF
36. Sequence comparisons among dispersed members of the Brassica S multigene family in an S9 genome.
- Author
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Kai N, Suzuki G, Watanabe M, Isogai A, and Hinata K
- Subjects
- Blotting, Southern, Cloning, Molecular, DNA, Complementary metabolism, Evolution, Molecular, Genetic Linkage, Genetic Variation, Haplotypes, Homozygote, Models, Genetic, Multigene Family, Phylogeny, Polymorphism, Restriction Fragment Length, Protein Structure, Tertiary, Sequence Analysis, DNA, Brassica genetics, Genome, Plant
- Abstract
Self-incompatibility (SI) systems prevent self-pollination and promote outbreeding. In Brassica, the SI genes SLG (for S-locus glycoprotein) and SRK (for S-receptor kinase) are members of the S multigene family, which share the SLG-like domain (S domain), which encodes a putative receptor. We have cloned members of the S multigene family from the S9 haplotype of B. campestris (syn. rapa). In addition, eight distinct genomic regions harboring 10 SLG/SRK-like genes were characterized in the present study. Sequence analysis revealed two novel SRK-like genes, BcRK3 and BcRK6 (for B. campestris receptor kinases 3 and 6, respectively). Other genes that were characterized included SFR2 (for S gene family receptor 2), SLR2 (for S locus related gene 2), and a pseudogene. Based on phylogenetic analysis of the nucleotide sequences of the S domain regions, SLG and SRK appear to be distinct from other members of the S multigene family. Linkage analysis showed that most members of the S multigene family are dispersed in the Brassica genome, and that SLR1 (S locus related gene 1) is not linked to the SLR2 in B. campestris.
- Published
- 2001
- Full Text
- View/download PDF
37. A pollen coat protein, SP11/SCR, determines the pollen S-specificity in the self-incompatibility of Brassica species.
- Author
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Shiba H, Takayama S, Iwano M, Shimosato H, Funato M, Nakagawa T, Che FS, Suzuki G, Watanabe M, Hinata K, and Isogai A
- Subjects
- Agrobacterium tumefaciens genetics, Base Sequence, Brassica metabolism, Homozygote, Molecular Sequence Data, Plant Proteins chemistry, Plants, Genetically Modified metabolism, Pollen genetics, Polymorphism, Genetic, Protein Kinases metabolism, Sequence Alignment, Sequence Deletion, Sequence Homology, Nucleic Acid, Transformation, Genetic, Brassica genetics, Plant Proteins genetics, Pollen physiology, Promoter Regions, Genetic, Protein Kinases genetics
- Abstract
Many flowering plants have evolved self-incompatibility (SI) systems to prevent inbreeding. In the Brassicaceae, SI is genetically controlled by a single polymorphic locus, termed the S-locus. Pollen rejection occurs when stigma and pollen share the same S-haplotype. Recognition of S-haplotype specificity has recently been shown to involve at least two S-locus genes, S-receptor kinase (SRK) and S-locus protein 11 or S-locus Cys-rich (SP11/SCR). SRK encodes a polymorphic membrane-spanning protein kinase, which is the sole female determinant of the S-haplotype specificity. SP11/SCR encodes a highly polymorphic Cys-rich small basic protein specifically expressed in the anther tapetum and in pollen. In cauliflower (B. oleracea), the gain-of-function approach has demonstrated that an allele of SP11/SCR encodes the male determinant of S-specificity. Here we examined the function of two alleles of SP11/SCR of B. rapa by the same approach and further established that SP11/SCR is the sole male determinant of SI in the genus Brassica sp. Our results also suggested that the 522-bp 5'-upstream region of the S9-SP11 gene used to drive the transgene contained all the regulatory elements required for the unique sporophytic/gametophytic expression observed for the native SP11 gene. Promoter deletion analyses suggested that the highly conserved 192-bp upstream region was sufficient for driving this unique expression. Furthermore, immunohistochemical analyses revealed that the protein product of the SP11 transgene was present in the tapetum and pollen, and that in pollen of late developmental stages, the SP11 protein was mainly localized in the pollen coat, a finding consistent with its expected biological role.
- Published
- 2001
- Full Text
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38. The S receptor kinase gene determines dominance relationships in stigma expression of self-incompatibility in Brassica.
- Author
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Hatakeyama K, Takasaki T, Suzuki G, Nishio T, Watanabe M, Isogai A, and Hinata K
- Subjects
- Blotting, Northern, Brassica metabolism, Brassica physiology, Crosses, Genetic, Genes, Dominant, Genotype, Haplotypes, Phenotype, Plant Proteins, Plant Structures genetics, Plant Structures metabolism, Pollen genetics, Protein Kinases metabolism, RNA, Messenger analysis, Reproduction, Reverse Transcriptase Polymerase Chain Reaction, Transgenes, Brassica genetics, Gene Expression Regulation, Plant, Protein Kinases genetics
- Abstract
Self-incompatibility (SI) in Brassica is sporophytically controlled by the multi-allelic S locus. SI phenotypes of the stigma and pollen in an S heterozygote are determined by the two S haplotypes it carries; the two haplotypes may be co-dominant or exhibit a dominant/recessive relationship. Because the S receptor kinase (SRK) gene of the S locus was recently shown to determine the S haplotype specificity of the stigma, we wished to investigate whether SRK also plays a role in the dominance relationships between S haplotypes. We crossed plants carrying an SRK28 transgene with plants homozygous for one of five S haplotypes that are either co-dominant with, or recessive to, S28 haplotype in the stigma, and analyzed the SI phenotypes of the progeny. In all cases, the SI phenotype of the stigma of plants carrying the SRK28 transgene could be predicted by the known dominance relationships between the S haplotype(s) and the S28 haplotype. Moreover, in the S43 homozygote carrying the SRK28 transgene where the S43 phenotype in the stigma was masked by the presence of the SRK28, the transcript level of SRK28 was found to be much lower than that of SRK43. All these results suggest that the dominance relationships between S haplotypes in the stigma are determined by SRK, but not by virtue of its relative expression level.
- Published
- 2001
- Full Text
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39. Nuclear factor kappaB subunits induce epithelial cell growth arrest.
- Author
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Seitz CS, Deng H, Hinata K, Lin Q, and Khavari PA
- Subjects
- Animals, Cell Cycle physiology, Cell Division physiology, Cells, Cultured, Cyclin-Dependent Kinase Inhibitor p21, Cyclins biosynthesis, Cyclins physiology, Epithelial Cells metabolism, Epithelial Cells physiology, Growth Inhibitors genetics, Humans, Hyperplasia, Mice, Mice, Inbred C57BL, Mice, Transgenic, NF-kappa B genetics, Skin cytology, Skin metabolism, Skin pathology, Epithelial Cells cytology, Growth Inhibitors physiology, NF-kappa B physiology
- Abstract
Nuclear factor kappaB (NF-kappaB) gene-regulatory proteins play important roles in inflammation, neoplasia, and programmed cell death. Recently, blockade of NF-kappaB function has been shown to result in epithelial hyperplasia, suggesting a potential role for NF-kappaB in negative growth regulation. We expressed active NF-kappaB subunits in normal epithelial cells and found that NF-kappaB profoundly inhibits cell cycle progression. This growth inhibition is resistant to mitogenic stimuli and is accompanied by other features of irreversible growth arrest. NF-kappaB-triggered cell cycle arrest is also associated with selective induction of the cyclin-dependent kinase inhibitor p21CiP1, with overexpression of p21(Cip1) alone inducing findings similar to those seen with NF-kappaB in vitro. An active NF-kappaB subunit expressed in the epidermis of p21(CiP1-/- mice, however, displays only partial growth-inhibitory effects, suggesting that full NF-kappaB growth inhibition is only partially p21(Cip1) dependent in this setting. These data indicate that NF-kappaB can trigger cell cycle arrest in epithelial cells in association with selective induction of a cell cycle inhibitor.
- Published
- 2000
40. Highly divergent sequences of the pollen self-incompatibility (S) gene in class-I S haplotypes of Brassica campestris (syn. rapa) L.
- Author
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Watanabe M, Ito A, Takada Y, Ninomiya C, Kakizaki T, Takahata Y, Hatakeyama K, Hinata K, Suzuki G, Takasaki T, Satta Y, Shiba H, Takayama S, and Isogai A
- Subjects
- Alleles, Amino Acid Sequence, Chromosome Mapping, Cloning, Molecular, DNA, Complementary chemistry, DNA, Complementary genetics, DNA, Plant genetics, Electrophoresis, Gel, Pulsed-Field, Evolution, Molecular, Genetic Variation, Haplotypes, Molecular Sequence Data, Phylogeny, Sequence Alignment, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Brassica genetics, Glycoproteins genetics, Plant Proteins genetics, Pollen genetics
- Abstract
Self-incompatibility (SI) enables flowering plants to discriminate between self- and non-self-pollen. In Brassica, SI is controlled by the highly polymorphic S locus. The recently identified male determinant, termed SP11 or SCR, is thought to be the ligand of S receptor kinase, the female determinant. To examine functional and evolutionary properties of SP11, we cloned 14 alleles from class-I S haplotypes of Brassica campestris and carried out sequence analyses. The sequences of mature SP11 proteins are highly divergent, except for the presence of conserved cysteines. The phylogenetic trees suggest possible co-evolution of the genes encoding the male and female determinants.
- Published
- 2000
- Full Text
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41. Alteration of the self-incompatibility phenotype in Brassica by transformation of the antisense SLG gene.
- Author
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Shiba H, Kimura N, Takayama S, Hinata K, Suzuki A, and Isogai A
- Subjects
- Brassica anatomy & histology, Brassica physiology, Crosses, Genetic, Gene Expression Regulation, Plant, Glycoproteins analysis, Immunoblotting, Inbreeding, Phenotype, Plant Physiological Phenomena, Plant Proteins analysis, Protein Kinases analysis, RNA, Plant analysis, Transformation, Genetic, Transgenes, Brassica genetics, DNA, Antisense genetics, Glycoproteins genetics, Plant Proteins genetics, Plants, Genetically Modified physiology, Protein Kinases genetics
- Abstract
Self-incompatible (SI) Brassica rapa (syn. B. campestris) was transformed with an antisense SLG gene by using SLG8 cDNA isolated from the B. campestris S8 homozygote. Two transformed lines were obtained and analyzed. Northern blot and Western blot analyses revealed that endogenous SLG and SRK were greatly reduced of the transcriptional and translational levels in the transformant. Pollination experiments confirmed that their SI phenotype had broken down. In addition, the progeny with the antisense SLG gene, resulting from self- or cross-pollination of the transgenic plant, also showed the self-compatible phenotype. The breakdown of SI in the tranformants was due to the change in property of the stigma and not of the pollen. These results provide strong evidence that SLG and/or SRK is implicated in the pollen-stigma recognition of SI and that they act only as stigmatic factors.
- Published
- 2000
- Full Text
- View/download PDF
42. Isolation and characterization of pollen coat proteins of Brassica campestris that interact with S locus-related glycoprotein 1 involved in pollen-stigma adhesion.
- Author
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Takayama S, Shiba H, Iwano M, Asano K, Hara M, Che FS, Watanabe M, Hinata K, and Isogai A
- Subjects
- Amino Acid Sequence, Base Sequence, Cloning, Molecular, DNA Primers, Gene Expression Regulation, Plant, Kinetics, Molecular Sequence Data, Plant Proteins genetics, Plant Proteins metabolism, Sequence Homology, Amino Acid, Brassica metabolism, Plant Proteins isolation & purification, Pollen metabolism
- Abstract
Adhesion of pollen grains to the stigmatic surface is a critical step during sexual reproduction in plants. In Brassica, S locus-related glycoprotein 1 (SLR1), a stigma-specific protein belonging to the S gene family of proteins, has been shown to be involved in this step. However, the identity of the interacting counterpart in pollen and the molecular mechanism of this interaction have not been determined. Using an optical biosensor immobilized with S gene family proteins, we detected strong SLR1-binding activity in pollen coat extracts of Brassica campestris. Two SLR1-binding proteins, named SLR1-BP1 and SLR1-BP2, were identified and purified by the combination of SLR1 affinity column chromatography and reverse-phase HPLC. Sequence analyses revealed that these two proteins (i) differ only in that a proline residue near the N terminus is hydroxylated in SLR1-BP1 but not in SLR1-BP2, and (ii) are members of the class A pollen coat protein (PCP) family, which includes PCP-A1, an SLG (S locus glycoprotein)-binding protein isolated from Brassica oleracea. Kinetic analysis showed that SLR1-BP1 and SLR1-BP2 specifically bound SLR1 with high affinity (K(d) = 5.6 and 4.4 nM, respectively). The SLR1-BP gene was specifically expressed in pollen at late stages of development, and its sequence is highly conserved in Brassica species with the A genome.
- Published
- 2000
- Full Text
- View/download PDF
43. The S receptor kinase determines self-incompatibility in Brassica stigma.
- Author
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Takasaki T, Hatakeyama K, Suzuki G, Watanabe M, Isogai A, and Hinata K
- Subjects
- Brassica enzymology, Glycoproteins genetics, Glycoproteins physiology, Haplotypes, Plant Proteins genetics, Plant Proteins physiology, Plant Structures physiology, Plants, Genetically Modified, Pollen physiology, Protein Kinases genetics, Reproduction, Brassica physiology, Protein Kinases physiology
- Abstract
The self-incompatibility possessed by Brassica is an intraspecific reproductive barrier by which the stigma rejects self-pollen but accepts non-self-pollen for fertilization. The molecular/biochemical bases of recognition and rejection have been intensively studied. Self-incompatibility in Brassica is sporophytically controlled by the polymorphic S locus. Two tightly linked polymorphic genes at the S locus, S receptor kinase gene (SRK) and S locus glycoprotein gene (SLG), are specifically expressed in the papillar cells of the stigma, and analyses of self-compatible lines of Brassica have suggested that together they control stigma function in self-incompatibility interactions. Here we show, by transforming self-incompatible plants of Brassica rapa with an SRK28 and an SLG28 transgene separately, that expression of SRK28 alone, but not SLG28 alone, conferred the ability to reject self (S28)-pollen on the transgenic plants. We also show that the ability of SRK28 to reject S28 pollen was enhanced by SLG28. We conclude that SRK alone determines S haplotype specificity of the stigma, and that SLG acts to promote a full manifestation of the self-incompatibility response.
- Published
- 2000
- Full Text
- View/download PDF
44. The pollen determinant of self-incompatibility in Brassica campestris.
- Author
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Takayama S, Shiba H, Iwano M, Shimosato H, Che FS, Kai N, Watanabe M, Suzuki G, Hinata K, and Isogai A
- Subjects
- Amino Acid Sequence, Base Sequence, Chromosome Mapping, Cloning, Molecular, Gene Expression Regulation, Plant, Genes, Plant, Haplotypes, In Situ Hybridization, Molecular Sequence Data, Plant Proteins chemistry, Pollen metabolism, RNA, Messenger metabolism, Recombinant Proteins, Sequence Alignment, Brassica genetics, Plant Proteins genetics
- Abstract
Many flowering plants possess self-incompatibility (SI) systems that prevent inbreeding. In Brassica, SI is controlled by a single polymorphic locus, the S locus. Two highly polymorphic S locus genes, SLG (S locus glycoprotein) and SRK (S receptor kinase), have been identified, both of which are expressed predominantly in the stigmatic papillar cell. We have shown recently that SRK is the determinant of the S haplotype specificity of the stigma. SRK is thought to serve as a receptor for a pollen ligand, which presumably is encoded by another polymorphic gene at the S locus. We previously have identified an S locus gene, SP11 (S locus protein 11), of the S(9) haplotype of Brassica campestris and proposed that it potentially encodes the pollen ligand. SP11 is a novel member of the PCP (pollen coat protein) family of proteins, some members of which have been shown to interact with SLG. In this work, we identified the SP11 gene from three additional S haplotypes and further characterized the gene. We found that (i) SP11 showed an S haplotype-specific sequence polymorphism; (ii) SP11 was located in the immediate flanking region of the SRK gene of the four S haplotypes examined; (iii) SP11 was expressed in the tapetum of the anther, a site consistent with sporophytic control of Brassica SI; and (iv) recombinant SP11 of the S(9) haplotype applied to papillar cells of S(9) stigmas, but not of S(8) stigmas, elicited SI response, resulting in inhibition of hydration of cross-pollen. All these results taken together strongly suggest that SP11 is the pollen S determinant in SI.
- Published
- 2000
- Full Text
- View/download PDF
45. NF-kappaB determines localization and features of cell death in epidermis.
- Author
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Seitz CS, Freiberg RA, Hinata K, and Khavari PA
- Subjects
- Animals, Baculoviral IAP Repeat-Containing 3 Protein, Cell Death physiology, Inhibitor of Apoptosis Proteins, Mice, Proteins physiology, Receptors, Tumor Necrosis Factor physiology, TNF Receptor-Associated Factor 1, Tumor Necrosis Factor-alpha physiology, Ubiquitin-Protein Ligases, Apoptosis physiology, Epidermis pathology, Epidermis physiology, Gene Expression Regulation physiology, NF-kappa B physiology
- Abstract
Specialized forms of physiologic cell death lacking certain characteristic morphologic features of apoptosis occur in terminally differentiating tissues, such as in the outer cell layers of epidermis. In these cell layers, NF-kappaB translocates from the cytoplasm to the nucleus and induces target gene expression. In light of its potent role in regulating apoptotic cell death in other tissues, NF-kappaB activation in these cells suggests that this transcription factor regulates cell death during terminal differentiation. Here, we show that NF-kappaB protects normal epithelial cells from apoptosis induced by both TNFalpha and Fas, whereas NF-kappaB blockade enhances susceptibility to death via both pathways. Expression of IkappaBalphaM under control of keratin promoter in transgenic mice caused a blockade of NF-kappaB function in the epidermis and provoked premature spontaneous cell death with apoptotic features. In normal tissue, expression of the known NF-kappaB-regulated antiapoptotic factors, TRAF1, TRAF2, c-IAP1, and c-IAP2, is most pronounced in outer epidermis. In transgenic mice, NF-kappaB blockade suppressed this expression, whereas NF-kappaB activation augmented it, consistent with regulation of cell death by these NF-kappaB effector proteins. These data identify a new role for NF-kappaB in preventing premature apoptosis in cells committed to undergoing physiologic cell death and indicate that, in stratified epithelium, such cell death normally proceeds via a distinct pathway that is resistant to NF-kappaB and its antiapoptotic target effector genes.
- Published
- 2000
- Full Text
- View/download PDF
46. Genomic organization of the S locus: Identification and characterization of genes in SLG/SRK region of S(9) haplotype of Brassica campestris (syn. rapa).
- Author
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Suzuki G, Kai N, Hirose T, Fukui K, Nishio T, Takayama S, Isogai A, Watanabe M, and Hinata K
- Subjects
- Amino Acid Sequence, Base Composition, Brassica enzymology, Cloning, Molecular, DNA Transposable Elements genetics, Gene Expression, Gene Expression Regulation, Plant, Gene Library, Genetic Linkage genetics, Genome, Plant, Molecular Sequence Data, Open Reading Frames genetics, Physical Chromosome Mapping, Plant Structures enzymology, Plant Structures genetics, Plant Structures growth & development, Polymorphism, Genetic genetics, RNA, Messenger analysis, RNA, Messenger genetics, Sequence Homology, Amino Acid, Brassica genetics, Genes, Plant genetics, Glycoproteins genetics, Haplotypes genetics, Plant Proteins genetics
- Abstract
In Brassica, two self-incompatibility genes, encoding SLG (S locus glycoprotein) and SRK (S-receptor kinase), are located at the S locus and expressed in the stigma. Recent molecular analysis has revealed that the S locus is highly polymorphic and contains several genes, i.e., SLG, SRK, the as-yet-unidentified pollen S gene(s), and other linked genes. In the present study, we searched for expressed sequences in a 76-kb SLG/SRK region of the S(9) haplotype of Brassica campestris (syn. rapa) and identified 10 genes in addition to the four previously identified (SLG(9), SRK(9), SAE1, and SLL2) in this haplotype. This gene density (1 gene/5.4 kb) suggests that the S locus is embedded in a gene-rich region of the genome. The average G + C content in this region is 32.6%. An En/Spm-type transposon-like element was found downstream of SLG(9). Among the genes we identified that had not previously been found to be linked to the S locus were genes encoding a small cysteine-rich protein, a J-domain protein, and an antisilencing protein (ASF1) homologue. The small cysteine-rich protein was similar to a pollen coat protein, named PCP-A1, which had previously been shown to bind SLG.
- Published
- 1999
- Full Text
- View/download PDF
47. Introduction of SLG (S locus glycoprotein) alters the phenotype of endogenous S haplotype, but confers no new S haplotype specificity in Brassica rapa L.
- Author
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Takasaki T, Hatakeyama K, Watanabe M, Toriyama K, Isogai A, and Hinata K
- Subjects
- Blotting, Southern, Cloning, Molecular, DNA, Plant genetics, Genotype, Glycoproteins metabolism, Haplotypes, Phenotype, Plant Proteins metabolism, Plants, Genetically Modified, RNA, Plant genetics, RNA, Plant metabolism, Transcription, Genetic, Brassica genetics, Glycoproteins genetics, Plant Proteins genetics, Transformation, Genetic
- Abstract
Self-incompatibility (SI) in Brassicaceae is genetically controlled by the S locus complex in which S locus glycoprotein (SLG) and S receptor kinase (SRK) genes have been identified, and these two genes encoding stigma proteins are believed to play important roles in SI recognition reaction. Here we introduced the SLG43 gene of Brassica rapa into a self-incompatible cultivar, Osome, of B. rapa, and examined the effect of this transgene on the SI behavior of the transgenic plants. Preliminary pollination experiments demonstrated that Osome carried S52 and S60, and both were codominant in stigma, but S52 was dominant to S60 in pollen. S43 was found to be recessive to S52 and codominant with S60 in stigma. The nucleotide sequence of SLG43 was more similar to that of SLG52 (87.8% identity) than to that of SLG60 (74.8% identity). Three of the ten primary transformants (designated No. 1 to No. 10) were either completely (No. 9) or partially (No. 6 and No. 7) self-compatible; the SI phenotype of the stigma was changed from S52S60 to S60, but the SI phenotype of the pollen was not altered. In these three plants, the mRNA and protein levels of both SLG43 and SLG52 were reduced, whereas those of SLG60 were not. All the plants in the selfed progeny of No. 9 and No. 6 regained SI and they produced a normal level of SLG52. These results suggest that the alteration of the SI phenotype of the stigma in the transformants Nos. 6, 7, and 9 was the result of specific co-suppression between the SLG43 transgene and the endogenous SLG52 gene. Three of the transformants (Nos. 5, 8 and 10) produced SLG43 protein, but their SI phenotype was not altered. The S60 homozygotes in the selfed progeny of No. 10 which produced the highest level of SLG43 were studied because S43 was codominant with S60 in the stigma. They produced SLG43 at approximately the same level as did S43S60 heterozygotes, but did not show S43 haplotype specificity at the stigma side. We conclude that SLG is necessary for the expression of the S haplotype specificity in the stigma but the introduction of SLG alone is not sufficient for conferring a novel S haplotype specificity to the stigma.
- Published
- 1999
- Full Text
- View/download PDF
48. Genes and regulatory sites of the "host-takeover module" in the terminal redundancy of Bacillus subtilis bacteriophage SPO1.
- Author
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Stewart CR, Gaslightwala I, Hinata K, Krolikowski KA, Needleman DS, Peng AS, Peterman MA, Tobias A, and Wei P
- Subjects
- Amino Acid Sequence, Bacillus subtilis virology, Base Sequence, DNA, Viral, Molecular Sequence Data, Promoter Regions, Genetic, Sequence Homology, Nucleic Acid, Bacillus Phages genetics, Genes, Viral, Regulatory Sequences, Nucleic Acid
- Abstract
Early in infection of Bacillus subtilis by bacteriophage SPO1, the synthesis of most host-specific macromolecules is replaced by the corresponding phage-specific biosyntheses. It is believed that this subversion of the host biosynthetic machinery is accomplished primarily by a cluster of early genes in the SPO1 terminal redundancy. Here we analyze the nucleotide sequence of this 11.5-kb "host-takeover module," which appears to be designed for particularly efficient expression. Promoters, ribosome-binding sites, and codon usage statistics all show characteristics known to be associated with efficient function in B. subtilis. The promoters and ribosome-binding sites have additional conserved features which are not characteristic of their host counterparts and which may be important for competition with host genes for the cellular biosynthetic machinery. The module includes 24 genes, tightly packed into 12 operons driven by the previously identified early promoters PE1 to PE12. The genes are smaller than average, with half of them having fewer than 100 codons. Most of their inferred products show little similarity to known proteins, although zinc finger, trans-membrane, and RNA polymerase-binding domains were identified. Transcription-termination and RNase III cleavage sites were found at appropriate locations.
- Published
- 1998
- Full Text
- View/download PDF
49. Molecular characterization of S locus genes, SLG and SRK, in a pollen-recessive self-incompatibility haplotype of Brassica rapa L.
- Author
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Hatakeyama K, Takasaki T, Watanabe M, and Hinata K
- Subjects
- Amino Acid Sequence, Base Sequence, Cloning, Molecular, DNA, Complementary chemistry, Genes, Recessive, Genetic Linkage, Glycoproteins biosynthesis, Glycoproteins chemistry, Haplotypes, Molecular Sequence Data, Plant Proteins biosynthesis, Plant Proteins chemistry, Pollen, Polymerase Chain Reaction, Polymorphism, Restriction Fragment Length, Protein Kinases biosynthesis, Protein Kinases chemistry, Recombinant Proteins biosynthesis, Recombinant Proteins chemistry, Restriction Mapping, Sequence Alignment, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Brassica genetics, Genes, Plant, Glycoproteins genetics, Plant Proteins genetics, Protein Kinases genetics
- Abstract
In Brassica species that exhibit self-incompatibility, two genes, SLG and SRK, at the S locus are involved in the recognition reaction with self and non-self pollen. From a pollen-recessive S29 haplotype of Brassica rapa, both cDNA and genomic DNA clones for these two genes were isolated and characterized. The nucleotide sequence for the S domain of SRK29 showed a high degree of similarity with that of SLG29, and they belong to Class II type. RNA gel blot analysis showed that the transcript of SLG29 consisted of the first and second exons, and no other transcript containing any part of the intron sequence was detected. Because no transmembrane domain was encoded by the second exon of SLG29, SLG29 was designated a secreted type glycoprotein. SLGs of two other pollen-recessive haplotypes, S40 and S44, of B. rapa also had a similar structure to that of SLG29. Previously, SLG2 from a pollen-recessive haplotype, S2, of Brassica oleracea was found to produce two different transcripts, one for the secreted type glycoprotein and the other for a putative membrane-anchored form of SLG. Therefore, the nature of these SLGs from pollen-recessive haplotypes of B. rapa is different from that of SLG2 of B. oleracea.
- Published
- 1998
- Full Text
- View/download PDF
50. Isolation and characterization of fission yeast sns mutants defective at the mitosis-to-interphase transition.
- Author
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Matynia A, Mueller U, Ong N, Demeter J, Granger AL, Hinata K, and Sazer S
- Subjects
- Alleles, Amino Acid Sequence, Epistasis, Genetic, GTP Phosphohydrolases genetics, Gene Expression, Genetic Complementation Test, Genetic Linkage, Guanine Nucleotide Exchange Factors genetics, Molecular Sequence Data, Phenotype, Schizosaccharomyces genetics, Schizosaccharomyces isolation & purification, Interphase genetics, Mitosis genetics, Mutation, Schizosaccharomyces cytology
- Abstract
pim1-d1ts was previously identified in a visual screen for fission yeast mutants unable to complete the mitosis-to-interphase transition. pim1+ encodes the guanine nucleotide exchange factor (GEF) for the spi1 GTPase. Perturbations of this GTPase system by either mutation or overproduction of its regulatory proteins cause cells to arrest with postmitotic condensed chromosomes, an unreplicated genome, and a wide medial septum. The septation phenotype of pim1-d1ts was used as the basis for a more extensive screen for this novel class of sns (septated, not in S-phase) mutants. Seventeen mutants representing 14 complementation groups were isolated. Three strains, sns-A3, sns-A5, and sns-A6, representing two different alleles, are mutated in the pim1+ gene. Of the 13 non-pim1ts sns complementation groups, 11 showed genetic interactions with the spi1 GTPase system. The genes mutated in 10 sns strains were synthetically lethal with pim1-d1, and six sns strains were hypersensitive to overexpression of one or more of the known components of the spil GTPase system. Epistasis analysis places the action of the genes mutated in nine of these strains downstream of pim1+ and the action of one gene upstream of pim1+. Three strains, sns-A2, sns-B1, and sns-B9, showed genetic interaction with the spil GTPase system in every test performed. sns-B1 and sns-B9 are likely to identify downstream targets, whereas sns-A2 is likely to identify upstream regulators of the spi1 GTPase system that are required for the mitosis-to-interphase transition.
- Published
- 1998
- Full Text
- View/download PDF
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