58 results on '"John C Tuthill"'
Search Results
2. Central processing of leg proprioception in Drosophila
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Sweta Agrawal, Evyn S Dickinson, Anne Sustar, Pralaksha Gurung, David Shepherd, James W Truman, and John C Tuthill
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proprioception ,motor control ,electrophysiology ,behavior ,sensorimotor ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Proprioception, the sense of self-movement and position, is mediated by mechanosensory neurons that detect diverse features of body kinematics. Although proprioceptive feedback is crucial for accurate motor control, little is known about how downstream circuits transform limb sensory information to guide motor output. Here we investigate neural circuits in Drosophila that process proprioceptive information from the fly leg. We identify three cell types from distinct developmental lineages that are positioned to receive input from proprioceptor subtypes encoding tibia position, movement, and vibration. 13Bα neurons encode femur-tibia joint angle and mediate postural changes in tibia position. 9Aα neurons also drive changes in leg posture, but encode a combination of directional movement, high frequency vibration, and joint angle. Activating 10Bα neurons, which encode tibia vibration at specific joint angles, elicits pausing in walking flies. Altogether, our results reveal that central circuits integrate information across proprioceptor subtypes to construct complex sensorimotor representations that mediate diverse behaviors, including reflexive control of limb posture and detection of leg vibration.
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- 2020
- Full Text
- View/download PDF
3. A size principle for recruitment of Drosophila leg motor neurons
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Anthony W Azevedo, Evyn S Dickinson, Pralaksha Gurung, Lalanti Venkatasubramanian, Richard S Mann, and John C Tuthill
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motor control ,proprioception ,muscle ,motor neuron ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
To move the body, the brain must precisely coordinate patterns of activity among diverse populations of motor neurons. Here, we use in vivo calcium imaging, electrophysiology, and behavior to understand how genetically-identified motor neurons control flexion of the fruit fly tibia. We find that leg motor neurons exhibit a coordinated gradient of anatomical, physiological, and functional properties. Large, fast motor neurons control high force, ballistic movements while small, slow motor neurons control low force, postural movements. Intermediate neurons fall between these two extremes. This hierarchical organization resembles the size principle, first proposed as a mechanism for establishing recruitment order among vertebrate motor neurons. Recordings in behaving flies confirmed that motor neurons are typically recruited in order from slow to fast. However, we also find that fast, intermediate, and slow motor neurons receive distinct proprioceptive feedback signals, suggesting that the size principle is not the only mechanism that dictates motor neuron recruitment. Overall, this work reveals the functional organization of the fly leg motor system and establishes Drosophila as a tractable system for investigating neural mechanisms of limb motor control.
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- 2020
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- View/download PDF
4. BKinD-3D: Self-Supervised 3D Keypoint Discovery from Multi-View Videos.
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Jennifer J. Sun, Lili Karashchuk, Amil Dravid, Serim Ryou, Sonia Fereidooni, John C. Tuthill, Aggelos K. Katsaggelos, Bingni W. Brunton, Georgia Gkioxari, Ann Kennedy, Yisong Yue, and Pietro Perona
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- 2023
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5. BKinD-3D: Self-Supervised 3D Keypoint Discovery from Multi-View Videos.
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Jennifer J. Sun, Pierre Karashchuk, Amil Dravid, Serim Ryou, Sonia Fereidooni, John C. Tuthill, Aggelos K. Katsaggelos, Bingni W. Brunton, Georgia Gkioxari, Ann Kennedy, Yisong Yue, and Pietro Perona
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- 2022
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6. Anipose: A toolkit for robust markerless 3D pose estimation
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Pierre Karashchuk, Katie L. Rupp, Evyn S. Dickinson, Sarah Walling-Bell, Elischa Sanders, Eiman Azim, Bingni W. Brunton, and John C. Tuthill
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pose estimation ,robust tracking ,markerless tracking ,behavior ,3D ,deep learning ,Biology (General) ,QH301-705.5 - Abstract
Summary: Quantifying movement is critical for understanding animal behavior. Advances in computer vision now enable markerless tracking from 2D video, but most animals move in 3D. Here, we introduce Anipose, an open-source toolkit for robust markerless 3D pose estimation. Anipose is built on the 2D tracking method DeepLabCut, so users can expand their existing experimental setups to obtain accurate 3D tracking. It consists of four components: (1) a 3D calibration module, (2) filters to resolve 2D tracking errors, (3) a triangulation module that integrates temporal and spatial regularization, and (4) a pipeline to structure processing of large numbers of videos. We evaluate Anipose on a calibration board as well as mice, flies, and humans. By analyzing 3D leg kinematics tracked with Anipose, we identify a key role for joint rotation in motor control of fly walking. To help users get started with 3D tracking, we provide tutorials and documentation at http://anipose.org/.
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- 2021
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- View/download PDF
7. Synaptic architecture of leg and wing motor control networks in Drosophila
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Ellen Lesser, Anthony W. Azevedo, Jasper S. Phelps, Leila Elabbady, Andrew P. Cook, Brandon Mark, Sumiya Kuroda, Anne Sustar, Anthony J. Moussa, Chris J. Dallmann, Sweta Agrawal, Su-Yee J. Lee, Brandon G. Pratt, Kyobi Skutt-Kakari, Stephan Gerhard, Ran Lu, Nico Kemnitz, Kisuk Lee, Akhilesh Halageri, Manuel Castro, Dodam Ih, Jay Gager, Marwan Tammam, Sven Dorkenwald, Forrest C. Collman, Casey M Schneider-Mizell, Derrick Brittain, Chris S Jordan, H Sebastian Seung, Thomas Macrina, Michael H Dickinson, Wei-Chung Allen Lee, and John C. Tuthill
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Article - Abstract
Animal movement is controlled by motor neurons (MNs), which project out of the central nervous system to activate muscles. Because individual muscles may be used in many different behaviors, MN activity must be flexibly coordinated by dedicated premotor circuitry, the organization of which remains largely unknown. Here, we use comprehensive reconstruction of neuron anatomy and synaptic connectivity from volumetric electron microscopy (i.e., connectomics) to analyze the wiring logic of motor circuits controlling theDrosophilaleg and wing. We find that both leg and wing premotor networks are organized into modules that link MNs innervating muscles with related functions. However, the connectivity patterns within leg and wing motor modules are distinct. Leg premotor neurons exhibit proportional gradients of synaptic input onto MNs within each module, revealing a novel circuit basis for hierarchical MN recruitment. In comparison, wing premotor neurons lack proportional synaptic connectivity, which may allow muscles to be recruited in different combinations or with different relative timing. By comparing the architecture of distinct limb motor control systems within the same animal, we identify common principles of premotor network organization and specializations that reflect the unique biomechanical constraints and evolutionary origins of leg and wing motor control.
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- 2023
8. Tools for comprehensive reconstruction and analysis ofDrosophilamotor circuits
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Anthony Azevedo, Ellen Lesser, Brandon Mark, Jasper Phelps, Leila Elabbady, Sumiya Kuroda, Anne Sustar, Anthony Moussa, Avinash Kandelwal, Chris J. Dallmann, Sweta Agrawal, Su-Yee J. Lee, Brandon Pratt, Andrew Cook, Kyobi Skutt-Kakaria, Stephan Gerhard, Ran Lu, Nico Kemnitz, Kisuk Lee, Akhilesh Halageri, Manuel Castro, Dodam Ih, Jay Gager, Marwan Tammam, Sven Dorkenwald, Forrest Collman, Casey Schneider-Mizell, Derrick Brittain, Chris S. Jordan, Michael Dickinson, Alexandra Pacureanu, H. Sebastian Seung, Thomas Macrina, Wei-Chung Allen Lee, and John C. Tuthill
- Abstract
Like the vertebrate spinal cord, the insect ventral nerve cord (VNC) mediates limb sensation and motor control. Here, we applied automated tools for electron microscopy (EM) volume alignment, neuron reconstruction, and synapse prediction to create a draft connectome of theDrosophilaVNC. To interpret the VNC connectome, it is crucial to know its relationship with the rest of the body. We therefore mapped the muscle targets of leg and wing motor neurons in the connectome by comparing their morphology to genetic driver lines, dye fills, and x-ray holographic nano-tomography volumes of the fly leg and wing. Knowing the outputs of the connectome allowed us to identify neural circuits that coordinate the wings with the middle and front legs during escape takeoff. We provide the draft VNC connectome and motor neuron atlas, along with tools for programmatic and interactive access, as community resources.
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- 2022
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9. Editor's evaluation: Columnar neurons support saccadic bar tracking in Drosophila
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John C Tuthill
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- 2022
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10. AdultDrosophilalegs do not regenerate after amputation
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Anne Sustar and John C. Tuthill
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A recent paper by Abramset al. (2021) claimed that a simple dietary supplement is sufficient to induce appendage regeneration in jellyfish, flies, and mice. This would be remarkable, if true, because it was previously thought that flies and mice lack the capacity for regeneration after injury. We therefore sought to replicate their provocative results. We amputated one tibia of over 1000 fruit flies, fed them control or supplemented diets, and carefully examined their legs three weeks post-injury. We did not, however, observe any instances of leg regeneration. We conducted additional experiments that confirmed the complete absence of neurons, muscles, or other living cells in amputated tibias. Abramset al. also reported the formation of a white blob at the amputation site, which they interpreted as an intermediate regeneration morphology. We tested this hypothesis more rigorously and conclude that the white blob consists of bacteria. Overall, we failed to find any evidence for leg regeneration inDrosophila, even when flies were fed the supplemented diet. Our results therefore contradict the overarching conclusion of Abramset al. that dietary supplements are sufficient to unlock an ancestral mechanism that induces appendage regeneration.
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- 2022
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11. Origins of proprioceptor feature selectivity and topographic maps in theDrosophilaleg
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Akira Mamiya, Anne Sustar, Igor Siwanowicz, Yanyan Qi, Tzu-Chiao Lu, Pralaksha Gurung, Chenghao Chen, Jasper S. Phelps, Aaron T. Kuan, Alexandra Pacureanu, Wei-Chung Allen Lee, Hongjie Li, Natasha Mhatre, and John C. Tuthill
- Abstract
Our ability to sense and move our bodies relies on proprioceptors, sensory neurons that detect mechanical forces within the body. Proprioceptors are diverse: different subtypes detect different features of joint kinematics, such as position, directional movement, and vibration. However, because they are located within complex and dynamic peripheral tissues, the underlying mechanisms of proprioceptor feature selectivity remain poorly understood. Here, we investigate molecular and biomechanical contributions to proprioceptor diversity in theDrosophilaleg. Using single-nucleus RNA sequencing, we found that different proprioceptor subtypes express similar complements of mechanosensory and other ion channels. However, anatomical reconstruction of the proprioceptive organ and connected tendons revealed major biomechanical differences between proprioceptor subtypes. We constructed a computational model of the proprioceptors and tendons, which identified a putative biomechanical mechanism for joint angle selectivity. The model also predicted the existence of a goniotopic map of joint angle among position-tuned proprioceptors, which we confirmed using calcium imaging. Our findings suggest that biomechanical specialization is a key determinant of proprioceptor feature selectivity inDrosophila. More broadly, our discovery of proprioceptive maps in the fly leg reveals common organizational principles between proprioception and other topographically organized sensory systems.
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- 2022
- Full Text
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12. The DANNCE of the rats: a new toolkit for 3D tracking of animal behavior
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John C. Tuthill, Bingni W. Brunton, and Pierre Karashchuk
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0303 health sciences ,business.industry ,Computer science ,ComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISION ,Triangulation (computer vision) ,Cell Biology ,Biochemistry ,GeneralLiterature_MISCELLANEOUS ,03 medical and health sciences ,3d tracking ,Animal behavior ,Computer vision ,Artificial intelligence ,business ,Molecular Biology ,ComputingMethodologies_COMPUTERGRAPHICS ,030304 developmental biology ,Biotechnology - Abstract
A new approach tracks animal movements in 3D from multiple camera views using volumetric triangulation, reconciling occlusions and ambiguities present in any one camera view.
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- 2021
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13. Functional architecture of neural circuits for leg proprioception in Drosophila
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Gwyneth M Card, Brandon Mark, Sweta Agrawal, Anne Sustar, Jasper S. Phelps, Barry J. Dickson, Akira Mamiya, Chenghao Chen, Wei-Chung Allen Lee, and John C. Tuthill
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Proprioception ,Vibration sensing ,Computer science ,Functional connectivity ,Feedback control ,Biological neural network ,Sensory system ,Neuroscience - Abstract
To effectively control their bodies, animals rely on feedback from proprioceptive mechanosensory neurons. In the Drosophila leg, different proprioceptor subtypes monitor joint position, movement direction, and vibration. Here, we investigate how these diverse sensory signals are integrated by central proprioceptive circuits. We find that signals for leg joint position and directional movement converge in second-order neurons, revealing pathways for local feedback control of leg posture. Distinct populations of second-order neurons integrate tibia vibration signals across pairs of legs, suggesting a role in detecting external substrate vibration. In each pathway, the flow of sensory information is dynamically gated and sculpted by inhibition. Overall, our results reveal parallel pathways for processing of internal and external mechanosensory signals, which we propose mediate feedback control of leg movement and vibration sensing, respectively. The existence of a functional connectivity map also provides a resource for interpreting connectomic reconstruction of neural circuits for leg proprioception.
- Published
- 2021
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14. The evolutionary trajectory of drosophilid walking
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Ryan A. York, Luke E. Brezovec, Jenn Coughlan, Steven Herbst, Avery Krieger, Su-Yee Lee, Brandon Pratt, Ashley D. Smart, Eugene Song, Anton Suvorov, Daniel R. Matute, John C. Tuthill, and Thomas R. Clandinin
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Phenotype ,Animals ,Drosophila ,General Agricultural and Biological Sciences ,Locomotion ,Phylogeny ,General Biochemistry, Genetics and Molecular Biology - Abstract
Neural circuits must both execute the behavioral repertoire of individuals and account for behavioral variation across species. Understanding how this variation emerges over evolutionary time requires large-scale phylogenetic comparisons of behavioral repertoires. Here, we describe the evolution of walking in fruit flies by capturing high-resolution, unconstrained movement from 13 species and 15 strains of drosophilids. We find that walking can be captured in a universal behavior space, the structure of which is evolutionarily conserved. However, the occurrence of and transitions between specific movements have evolved rapidly, resulting in repeated convergent evolution in the temporal structure of locomotion. Moreover, a meta-analysis demonstrates that many behaviors evolve more rapidly than other traits. Thus, the architecture and physiology of locomotor circuits can execute precise individual movements in one species and simultaneously support rapid evolutionary changes in the temporal ordering of these modular elements across clades.
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- 2022
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15. The two-body problem: Proprioception and motor control across the metamorphic divide
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Sweta Agrawal and John C. Tuthill
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Larva ,FOS: Biological sciences ,Quantitative Biology - Neurons and Cognition ,General Neuroscience ,fungi ,Animals ,Drosophila ,Neurons and Cognition (q-bio.NC) ,Proprioception ,Article - Abstract
Like a rocket being propelled into space, evolution has engineered flies to launch into adulthood via multiple stages. Flies develop and deploy two distinct bodies, linked by the transformative process of metamorphosis. The fly larva is a soft hydraulic tube that can crawl to find food and avoid predators. The adult fly has a stiff exoskeleton with articulated limbs capable of long-distance navigation and rich social interactions. Because the larval and adult forms are so distinct in structure, they require distinct strategies for sensing and moving the body. The metamorphic divide thus presents an opportunity for comparative analysis of neural circuits. Here, we review recent progress toward understanding the neural mechanisms of proprioception and motor control in larval and adult Drosophila. We highlight commonalities that point toward general principles of sensorimotor control and differences that may reflect unique constraints imposed by biomechanics. Finally, we discuss emerging opportunities for comparative analysis of neural circuit architecture in the fly and other animal species., 17 pages, 3 figures, review paper
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- 2022
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16. Central processing of leg proprioception in Drosophila
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Anne Sustar, Pralaksha Gurung, Sweta Agrawal, James W Truman, John C. Tuthill, Evyn S. Dickinson, and David Shepherd
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musculoskeletal diseases ,Sensory Receptor Cells ,QH301-705.5 ,proprioception ,Science ,Sensory system ,Kinematics ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Feedback, Sensory ,Neural Pathways ,Motor system ,Biological neural network ,motor control ,Animals ,Tibia ,Biology (General) ,Muscle, Skeletal ,sensorimotor ,D. melanogaster ,General Immunology and Microbiology ,Proprioception ,behavior ,General Neuroscience ,Motor control ,General Medicine ,electrophysiology ,Biomechanical Phenomena ,Hindlimb ,Electrophysiology ,Drosophila melanogaster ,Medicine ,Neuroscience ,Research Article - Abstract
Proprioception, the sense of self-movement and position, is mediated by mechanosensory neurons that detect diverse features of body kinematics. Although proprioceptive feedback is crucial for accurate motor control, little is known about how downstream circuits transform limb sensory information to guide motor output. Here we investigate neural circuits inDrosophilathat process proprioceptive information from the fly leg. We identify three cell types from distinct developmental lineages that are positioned to receive input from proprioceptor subtypes encoding tibia position, movement, and vibration. 13Bα neurons encode femur-tibia joint angle and mediate postural changes in tibia position. 9Aα neurons also drive changes in leg posture, but encode a combination of directional movement, high frequency vibration, and joint angle. Activating 10Bα neurons, which encode tibia vibration at specific joint angles, elicits pausing in walking flies. Altogether, our results reveal that central circuits integrate information across proprioceptor subtypes to construct complex sensorimotor representations that mediate diverse behaviors, including reflexive control of limb posture and detection of leg vibration.
- Published
- 2020
17. Author response: Central processing of leg proprioception in Drosophila
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Anne Sustar, David Shepherd, John C. Tuthill, Pralaksha Gurung, Evyn S. Dickinson, Sweta Agrawal, and James W. Truman
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biology ,Proprioception ,Drosophila (subgenus) ,biology.organism_classification ,Neuroscience - Published
- 2020
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- View/download PDF
18. Central processing of leg proprioception inDrosophila
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Pralaksha Gurung, Evyn S. Dickinson, Anne Sustar, David Shepherd, Sweta Agrawal, John C. Tuthill, and James W Truman
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Proprioception ,Biological neural network ,Motor control ,Sensory system ,Kinematics ,Tibia ,Biology ,High frequency vibration ,ENCODE ,Neuroscience - Abstract
Proprioception, the sense of self-movement and position, is mediated by mechanosensory neurons that detect diverse features of body kinematics. Although proprioceptive feedback is crucial for accurate motor control, little is known about how downstream circuits transform limb sensory information to guide motor output. Here, we investigate neural circuits inDrosophilathat process proprioceptive information from the fly leg. We identify three cell-types from distinct developmental lineages that are positioned to receive input from proprioceptor subtypes encoding tibia position, movement, and vibration. 13Bα neurons encode femur-tibia joint angle and mediate postural changes in tibia position. 9Aα neurons also drive changes in leg posture, but encode a combination of directional movement, high frequency vibration, and joint angle. Activating 10Bα neurons, which encode tibia vibration at specific joint angles, elicits pausing in walking flies. Altogether, our results reveal that central circuits integrate information across proprioceptor subtypes to construct complex sensorimotor representations that mediate diverse behaviors, including reflexive control of limb posture and detection of leg vibration.
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- 2020
- Full Text
- View/download PDF
19. A size principle for recruitment of Drosophila leg motor neurons
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John C. Tuthill, Anthony W. Azevedo, Evyn S. Dickinson, Richard S. Mann, Lalanti Venkatasubramanian, Pralaksha Gurung, Azevedo, Anthony W [0000-0001-8318-9678], Dickinson, Evyn S [0000-0001-7518-9512], Venkatasubramanian, Lalanti [0000-0002-9280-8335], Mann, Richard S [0000-0002-4749-2765], Tuthill, John C [0000-0002-5689-5806], and Apollo - University of Cambridge Repository
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0301 basic medicine ,muscle ,QH301-705.5 ,proprioception ,Science ,General Biochemistry, Genetics and Molecular Biology ,neuroscience ,03 medical and health sciences ,0302 clinical medicine ,Calcium imaging ,Motor system ,medicine ,motor control ,Animals ,Biology (General) ,motor neuron ,Drosophila ,Motor Neurons ,General Immunology and Microbiology ,biology ,Proprioception ,D. melanogaster ,Tibia ,Electromyography ,General Neuroscience ,Work (physics) ,Motor control ,General Medicine ,Motor neuron ,biology.organism_classification ,Biomechanical Phenomena ,Electrophysiology ,030104 developmental biology ,medicine.anatomical_structure ,nervous system ,Medicine ,Neuroscience ,030217 neurology & neurosurgery - Abstract
To move the body, the brain must precisely coordinate patterns of activity among diverse populations of motor neurons. Here, we use in vivo calcium imaging, electrophysiology, and behavior to understand how genetically-identified motor neurons control flexion of the fruit fly tibia. We find that leg motor neurons exhibit a coordinated gradient of anatomical, physiological, and functional properties. Large, fast motor neurons control high force, ballistic movements while small, slow motor neurons control low force, postural movements. Intermediate neurons fall between these two extremes. This hierarchical organization resembles the size principle, first proposed as a mechanism for establishing recruitment order among vertebrate motor neurons. Recordings in behaving flies confirmed that motor neurons are typically recruited in order from slow to fast. However, we also find that fast, intermediate, and slow motor neurons receive distinct proprioceptive feedback signals, suggesting that the size principle is not the only mechanism that dictates motor neuron recruitment. Overall, this work reveals the functional organization of the fly leg motor system and establishes Drosophila as a tractable system for investigating neural mechanisms of limb motor control.
- Published
- 2020
20. Anipose: a toolkit for robust markerless 3D pose estimation
- Author
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Evyn S. Dickinson, Pierre Karashchuk, Sarah Walling-Bell, Katie L. Rupp, John C. Tuthill, Elischa Sanders, Eiman Azim, and Bingni W. Brunton
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QH301-705.5 ,Computer science ,Movement ,Walking ,pose estimation ,Tracking (particle physics) ,3D pose estimation ,General Biochemistry, Genetics and Molecular Biology ,Article ,Mice ,Deep Learning ,Imaging, Three-Dimensional ,Software ,3d tracking ,Animals ,Humans ,Animal behavior ,Computer vision ,Biology (General) ,Pose ,computer.programming_language ,Behavior, Animal ,behavior ,business.industry ,Deep learning ,robust tracking ,Triangulation (computer vision) ,Python (programming language) ,Pipeline (software) ,Visualization ,Biomechanical Phenomena ,markerless tracking ,Artificial intelligence ,business ,computer ,3D ,Camera resectioning - Abstract
SUMMARY Quantifying movement is critical for understanding animal behavior. Advances in computer vision now enable markerless tracking from 2D video, but most animals move in 3D. Here, we introduce Anipose, an open-source toolkit for robust markerless 3D pose estimation. Anipose is built on the 2D tracking method Deep-LabCut, so users can expand their existing experimental setups to obtain accurate 3D tracking. It consists of four components: (1) a 3D calibration module, (2) filters to resolve 2D tracking errors, (3) a triangulation module that integrates temporal and spatial regularization, and (4) a pipeline to structure processing of large numbers of videos. We evaluate Anipose on a calibration board as well as mice, flies, and humans. By analyzing 3D leg kinematics tracked with Anipose, we identify a key role for joint rotation in motor control of fly walking. To help users get started with 3D tracking, we provide tutorials and documentation at http://anipose.org/., Graphical Abstract, In brief Karashchuk et al. introduce Anipose, a Python toolkit that enables researchers to track animal poses in 3D. Anipose performs 3D calibration, filters tracked keypoints, and visualizes resulting pose data. This open-source software and accompanying tutorials facilitate the analysis of 3D animal behavior and the biology that underlies it.
- Published
- 2020
- Full Text
- View/download PDF
21. Author response: A size principle for recruitment of Drosophila leg motor neurons
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Richard S. Mann, Lalanti Venkatasubramanian, Evyn S. Dickinson, John C. Tuthill, Pralaksha Gurung, and Anthony W. Azevedo
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biology ,Drosophila (subgenus) ,biology.organism_classification ,Neuroscience - Published
- 2020
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22. A Systematic Nomenclature for the Drosophila Ventral Nerve Cord
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Richard S. Mann, James W. Truman, Robert Court, Darren W. Williams, Wyatt Korff, John C. Tuthill, Michael H. Dickinson, David J. Merritt, Julie H. Simpson, Troy R. Shirangi, Jana Börner, Marta Costa, Gwyneth M Card, Shigehiro Namiki, David Shepherd, Andrew M. Seeds, Rod K. Murphey, J. Douglas Armstrong, and Carsten Duch
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0301 basic medicine ,Nervous system ,anatomy ,tectulum ,animal structures ,1.1 Normal biological development and functioning ,neuropil ,Sensory system ,hemilineage ,Article ,03 medical and health sciences ,0302 clinical medicine ,Terminology as Topic ,medicine ,Neuropil ,Psychology ,Animals ,Cell Lineage ,Invertebrate ,ontology ,Nomenclature ,Neurons ,Neurology & Neurosurgery ,biology ,General Neuroscience ,fungi ,Neurosciences ,Commissure ,motorneuron ,biology.organism_classification ,Neuromere ,tract ,Ganglia, Invertebrate ,030104 developmental biology ,medicine.anatomical_structure ,Drosophila melanogaster ,Ventral nerve cord ,Neurological ,Ganglia ,commissure ,insect ,Cognitive Sciences ,Nerve Net ,Neuroscience ,030217 neurology & neurosurgery ,neuromere - Abstract
Drosophila melanogaster is an established model for neuroscience research with relevance in biology and medicine. Until recently, research on the Drosophila brain was hindered by the lack of a complete and uniform nomenclature. Recognizing this, Ito et al. (2014) produced an authoritative nomenclature for the adult insect brain, using Drosophila as the reference. Here, we extend this nomenclature to the adult thoracic and abdominal neuromeres, the ventral nerve cord (VNC), to provide an anatomical description of this major component of the Drosophila nervous system. The VNC is the locus for the reception and integration of sensory information and involved in generating most of the locomotor actions that underlie fly behaviors. The aim is to create a nomenclature, definitions, and spatial boundaries for the Drosophila VNC that are consistent with other insects. The work establishes an anatomical framework that provides a powerful tool for analyzing the functional organization of the VNC.
- Published
- 2020
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23. Microtubule Acetylation Is Required for Mechanosensation in Drosophila
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Richard Superfine, John C. Tuthill, Joshua C. Vaughan, Jill Wildonger, Jay Z. Parrish, Yun Peng, Jonathan B. Perr, Fei Wang, E. Timothy O'Brien, Claire R. Williams, Stephen L. Rogers, Yang Xiang, Connie Yan, Hyeon-Jin Kim, Megan E. Kern, Michael R. Falvo, and Brian V. Jenkins
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0301 basic medicine ,Stimulation ,Sensory system ,medicine.disease_cause ,Mechanotransduction, Cellular ,Microtubules ,General Biochemistry, Genetics and Molecular Biology ,Article ,03 medical and health sciences ,Transient receptor potential channel ,0302 clinical medicine ,Transient Receptor Potential Channels ,Microtubule ,Acetyltransferases ,Peripheral Nervous System ,medicine ,Morphogenesis ,Animals ,Drosophila Proteins ,lcsh:QH301-705.5 ,Cells, Cultured ,Mutation ,Mechanosensation ,Chemistry ,Acetylation ,Dendrites ,Cell biology ,030104 developmental biology ,medicine.anatomical_structure ,Drosophila melanogaster ,lcsh:Biology (General) ,Peripheral nervous system ,Larva ,030217 neurology & neurosurgery - Abstract
Summary: At the cellular level, α-tubulin acetylation alters the structure of microtubules to render them mechanically resistant to compressive forces. How this biochemical property of microtubule acetylation relates to mechanosensation remains unknown, although prior studies have shown that microtubule acetylation influences touch perception. Here, we identify the major Drosophila α-tubulin acetylase (dTAT) and show that it plays key roles in several forms of mechanosensation. dTAT is highly expressed in the larval peripheral nervous system (PNS), but it is largely dispensable for neuronal morphogenesis. Mutation of the acetylase gene or the K40 acetylation site in α-tubulin impairs mechanical sensitivity in sensory neurons and behavioral responses to gentle touch, harsh touch, gravity, and vibration stimuli, but not noxious thermal stimulus. Finally, we show that dTAT is required for mechanically induced activation of NOMPC, a microtubule-associated transient receptor potential channel, and functions to maintain integrity of the microtubule cytoskeleton in response to mechanical stimulation. : Yan et al. identify the major microtubule acetylase in Drosophila and show that the enzyme and microtubule acetylation broadly control mechanosensation, but not other sensory modalities. Acetylation is required for mechanosensation by the TRP channel NOMPC, and possibly other channels, by virtue of its effects on microtubule mechanical stability and/or dynamics. Keywords: Drosophila, mechanosensation, microtubule acetylation, TRP channel, somatosensory neuron
- Published
- 2018
24. Functional architecture of neural circuits for leg proprioception in Drosophila
- Author
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Brandon Mark, Sweta Agrawal, Anne Sustar, Gwyneth M Card, Chenghao Chen, Akira Mamiya, Jasper S. Phelps, Wei-Chung Allen Lee, John C. Tuthill, and Barry J. Dickson
- Subjects
Proprioception ,Sensory Receptor Cells ,Feedback control ,Functional connectivity ,Movement ,Motor control ,Sensory system ,Optogenetics ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Article ,Calcium imaging ,Biological neural network ,Animals ,Drosophila ,General Agricultural and Biological Sciences ,Neuroscience - Abstract
SUMMARY To effectively control their bodies, animals rely on feedback from proprioceptive mechanosensory neurons. In the Drosophila leg, different proprioceptor subtypes monitor joint position, movement direction, and vibration. Here, we investigate how these diverse sensory signals are integrated by central proprioceptive circuits. We find that signals for leg joint position and directional movement converge in second-order neurons, revealing pathways for local feedback control of leg posture. Distinct populations of second-order neurons integrate tibia vibration signals across pairs of legs, suggesting a role in detecting external substrate vibration. In each pathway, the flow of sensory information is dynamically gated and sculpted by inhibition. Overall, our results reveal parallel pathways for processing of internal and external mechanosensory signals, which we propose mediate feedback control of leg movement and vibration sensing, respectively. The existence of a functional connectivity map also provides a resource for interpreting connectomic reconstruction of neural circuits for leg proprioception., In brief To understand how diverse proprioceptive signals from the Drosophila leg are integrated by downstream circuits, Chen et al. use optogenetics and calcium imaging to map functional connectivity between sensory and central neurons. This work identifies parallel neural pathways for processing leg vibration vs. joint position and movement., Graphical abstract
- Published
- 2021
25. A leg to stand on: computational models of proprioception
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Chris J. Dallmann, Pierre Karashchuk, John C. Tuthill, and Bingni W. Brunton
- Subjects
0301 basic medicine ,03 medical and health sciences ,Computational model ,030104 developmental biology ,0302 clinical medicine ,Proprioception ,Physiology ,Computer science ,Physiology (medical) ,Motor control ,Neuroscience ,Article ,030217 neurology & neurosurgery - Abstract
Dexterous motor control requires feedback from proprioceptors, internal mechanosensory neurons that sense the body’s position and movement. An outstanding question in neuroscience is how diverse proprioceptive feedback signals contribute to flexible motor control. Genetic tools now enable targeted recording and perturbation of proprioceptive neurons in behaving animals; however, these experiments can be challenging to interpret, due to the tight coupling of proprioception and motor control. Here, we argue that understanding the role of proprioceptive feedback in controlling behavior will be aided by the development of multiscale models of sensorimotor loops. We review current phenomenological and structural models for proprioceptor encoding and discuss how they may be integrated with existing models of posture, movement, and body state estimation.
- Published
- 2021
- Full Text
- View/download PDF
26. What we think about when we think about thinking
- Author
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John C. Tuthill
- Subjects
Biology ,General Agricultural and Biological Sciences ,General Biochemistry, Genetics and Molecular Biology ,Epistemology - Published
- 2020
- Full Text
- View/download PDF
27. Reconstruction of motor control circuits in adultDrosophilausing automated transmission electron microscopy
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Anthony W. Azevedo, Brendan L. Shanney, Wei-Chung Allen Lee, Logan A. Thomas, David G. C. Hildebrand, Jasper T. Maniates-Selvin, Aaron T. Kuan, John C. Tuthill, Tri Nguyen, Jan Funke, Brett J. Graham, and Julia Buhmann
- Subjects
0303 health sciences ,biology ,Computer science ,Motor control ,Sensory system ,Motor neuron ,biology.organism_classification ,Synapse ,03 medical and health sciences ,0302 clinical medicine ,medicine.anatomical_structure ,Transmission (telecommunications) ,Ventral nerve cord ,medicine ,Biological neural network ,Instrumentation (computer programming) ,Drosophila melanogaster ,Neuroscience ,030217 neurology & neurosurgery ,030304 developmental biology - Abstract
SUMMARYMany animals use coordinated limb movements to interact with and navigate through the environment. To investigate circuit mechanisms underlying locomotor behavior, we used serial-section electron microscopy (EM) to map synaptic connectivity within a neuronal network that controls limb movements. We present a synapse-resolution EM dataset containing the ventral nerve cord (VNC) of an adult femaleDrosophila melanogaster. To generate this dataset, we developed GridTape, a technology that combines automated serial-section collection with automated high-throughput transmission EM. Using this dataset, we reconstructed 507 motor neurons, including all those that control the legs and wings. We show that a specific class of leg sensory neurons directly synapse onto the largest-caliber motor neuron axons on both sides of the body, representing a unique feedback pathway for fast limb control. We provide open access to the dataset and reconstructions registered to a standard atlas to permit matching of cells between EM and light microscopy data. We also provide GridTape instrumentation designs and software to make large-scale EM data acquisition more accessible and affordable to the scientific community.
- Published
- 2020
- Full Text
- View/download PDF
28. A Systematic Nomenclature for the Drosophila Ventral Nervous System
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Richard S. Mann, Marta Costa, Wyatt Korff, Gwyneth M Card, Jana Börner, Robert Court, James W. Truman, Troy R. Shirangi, Andrew M. Seeds, David J. Merritt, John C. Tuthill, Douglas Armstrong, Rod K. Murphey, David Shepherd, Michael H. Dickinson, Julie H. Simpson, Darren William Williams, Carsten Duch, and Shigehiro Namiki
- Subjects
Nervous system ,Connectomics ,biology ,fungi ,Neuromere ,biology.organism_classification ,medicine.anatomical_structure ,Taxon ,medicine ,Neuropil ,Nomenclature ,Drosophila ,Neuroscience ,Neuroanatomy - Abstract
The fruit fly, Drosophila melanogaster, is an established and powerful model system for neuroscience research with wide relevance in biology and medicine. Until recently, research on the Drosophila brain was hindered by the lack of a complete and uniform nomenclature. Recognising this problem, the Insect Brain Name Working Group produced an authoritative hierarchical nomenclature system for the adult insect brain, using Drosophila melanogaster as the reference framework, with other taxa considered to ensure greater consistency and expandability (Ito et al., 2014). Here, we extend this nomenclature system to the sub-gnathal regions of the adult Drosophila nervous system, thus providing a systematic anatomical description of the ventral nervous system (VNS). This portion of the nervous system includes the thoracic and abdominal neuromeres that were not included in the original work and contains the motor circuits that play essential roles in most fly behaviours.
- Published
- 2020
- Full Text
- View/download PDF
29. Profound rumblings from the bowels of the lobster
- Author
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John C. Tuthill
- Subjects
Fishery ,Biology ,General Agricultural and Biological Sciences ,General Biochemistry, Genetics and Molecular Biology - Published
- 2018
- Full Text
- View/download PDF
30. Reconstruction of motor control circuits in adult Drosophila using automated transmission electron microscopy
- Author
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Jan Funke, Logan A. Thomas, Tri Nguyen, Wei-Chung Allen Lee, Jasper S. Phelps, Anne Sustar, David G. C. Hildebrand, Brett J. Graham, John C. Tuthill, Julia Buhmann, Brendan L. Shanny, Aaron T. Kuan, Mingguan Liu, Anthony W. Azevedo, and Sweta Agrawal
- Subjects
Connectomics ,Aging ,Sensory Receptor Cells ,Sensory system ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Article ,03 medical and health sciences ,Automation ,0302 clinical medicine ,Software ,Microscopy, Electron, Transmission ,Connectome ,Animals ,Computer vision ,Instrumentation (computer programming) ,Peripheral Nerves ,030304 developmental biology ,Electronic circuit ,Motor Neurons ,0303 health sciences ,business.industry ,Motor control ,Extremities ,Drosophila melanogaster ,Transmission (telecommunications) ,Ventral nerve cord ,Synapses ,Artificial intelligence ,business ,030217 neurology & neurosurgery - Abstract
To investigate circuit mechanisms underlying locomotor behavior, we used serial-section electron microscopy (EM) to acquire a synapse-resolution dataset containing the ventral nerve cord (VNC) of an adult female Drosophila melanogaster. To generate this dataset, we developed GridTape, a technology that combines automated serial-section collection with automated high-throughput transmission EM. Using this dataset, we studied neuronal networks that control leg and wing movements by reconstructing all 507 motor neurons that control the limbs. We show that a specific class of leg sensory neurons synapses directly onto motor neurons with the largest-caliber axons on both sides of the body, representing a unique pathway for fast limb control. We provide open access to the dataset and reconstructions registered to a standard atlas to permit matching of cells between EM and light microscopy data. We also provide GridTape instrumentation designs and software to make large-scale EM more accessible and affordable to the scientific community.
- Published
- 2019
31. A size principle for leg motor control in Drosophila
- Author
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John C. Tuthill, Anthony W. Azevedo, Evyn S. Dickinson, Pralaksha Gurung, Richard S. Mann, and Lalanti Venkatasubramanian
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0303 health sciences ,biology ,Motor control ,Optogenetics ,Motor neuron ,biology.organism_classification ,03 medical and health sciences ,Electrophysiology ,0302 clinical medicine ,medicine.anatomical_structure ,Calcium imaging ,nervous system ,Motor system ,medicine ,Drosophila melanogaster ,Neuroscience ,030217 neurology & neurosurgery ,030304 developmental biology - Abstract
SummaryTo move the body, the brain must precisely coordinate patterns of activity among diverse populations of motor neurons. In many species, including vertebrates, the motor neurons innervating a given muscle fire in a specific order that is determined by a gradient of cellular size and electrical excitability. This hierarchy allows premotor circuits to recruit motor neurons of increasing force capacity in a task-dependent manner. However, it remains unclear whether such a size principle also applies to species with more compact motor systems, such as the fruit fly,Drosophila melanogaster, which has just 53 motor neurons per leg. Usingin vivocalcium imaging and electrophysiology, we found that genetically-identified motor neurons controlling flexion of the fly tibia exhibit a gradient of anatomical, physiological, and functional properties consistent with the size principle. Large, fast motor neurons control high force, ballistic movements while small, slow motor neurons control low force, postural movements. Intermediate neurons fall between these two extremes. In behaving flies, motor neurons are recruited in order from slow to fast. This hierarchical organization suggests that slow and fast motor neurons control distinct motor regimes. Indeed, we find that optogenetic manipulation of each motor neuron type has distinct effects on the behavior of walking flies.
- Published
- 2019
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32. Parallel Transformation of Tactile Signals in Central Circuits of Drosophila
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John C. Tuthill and Rachel Wilson
- Subjects
0301 basic medicine ,Optogenetics ,Biology ,Stimulus (physiology) ,Somatosensory system ,Article ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Neural Pathways ,medicine ,Animals ,Axon ,Electronic circuit ,Neurons ,Proprioception ,Biochemistry, Genetics and Molecular Biology(all) ,Extremities ,Anatomy ,Axons ,Mechanoreceptor ,body regions ,030104 developmental biology ,medicine.anatomical_structure ,Touch ,Drosophila ,Female ,Neuron ,Mechanoreceptors ,Neuroscience - Abstract
To distinguish between complex somatosensory stimuli, central circuits must combine signals from multiple peripheral mechanoreceptor types, as well as mechanoreceptors at different sites in the body. Here, we investigate the first stages of somatosensory integration in Drosophila using in vivo recordings from genetically labeled central neurons, in combination with mechanical and optogenetic stimulation of specific mechanoreceptor types. We identify three classes of central neurons that process touch: one compares touch signals on different parts of the same limb, one compares touch signals on right and left limbs, and the third compares touch and proprioceptive signals. Each class encodes distinct features of somatosensory stimuli. The axon of an individual touch receptor neuron can diverge to synapse onto all three classes, meaning that these computations occur in parallel, not hierarchically. Representing a stimulus as a set of parallel comparisons is a fast and efficient way to deliver somatosensory signals to motor circuits.
- Published
- 2016
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33. Four to Foxtrot: How Visual Motion Is Computed in the Fly Brain
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John C. Tuthill and Bart G. Borghuis
- Subjects
Neurons ,0301 basic medicine ,Sensory Receptor Cells ,Neuroscience(all) ,General Neuroscience ,Motion Perception ,Presynaptic Terminals ,Biology ,Visual motion ,03 medical and health sciences ,030104 developmental biology ,medicine.anatomical_structure ,medicine ,Animals ,Calcium ,Neuron ,Motion perception ,Neuroscience ,Motion computation - Abstract
In this issue of Neuron, Serbe et al. (2016) use cell-type-specific genetic tools to record and manipulate all major inputs to directionally selective neurons in Drosophila. Their results localize the site of motion computation and reveal unexpected complexity of temporal tuning in the underlying neural circuit.
- Published
- 2016
- Full Text
- View/download PDF
34. Proprioception
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John C. Tuthill and Eiman Azim
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0301 basic medicine ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Movement ,Posture ,Humans ,General Agricultural and Biological Sciences ,Proprioception ,030217 neurology & neurosurgery ,General Biochemistry, Genetics and Molecular Biology - Abstract
Although familiar to each of us, the sensation of inhabiting a body is ineffable. Traditional senses like vision and hearing monitor the external environment, allowing humans to have shared sensory experiences. But proprioception, the sensation of body position and movement, is fundamentally personal and typically absent from conscious perception. Nonetheless, this 'sixth sense' remains critical to human experience, a fact that is most apparent when one considers those who have lost it. Take, for example, the case of Ian Waterman who, at the age of 19, suffered a rare autoimmune response to a flu infection that attacked the sensory neurons from his neck down. This infection deprived him of the sense of position, movement and touch in his body. With this loss of feedback came a complete inability to coordinate his movements. While he could compel his muscles to contract, he lost the ability to orchestrate these actions into purposeful behaviors, in essence leaving him immobile, unable to stand, walk, or use his body to interact with the world. Only after years of dedicated training was he able to re-learn to move his body entirely under visual control.
- Published
- 2018
35. Microtubule acetylation is required for mechanosensation inDrosophila
- Author
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Claire R. Williams, Yun Peng, Jill Wildonger, Yang Xiang, Stephen L. Rogers, Connie Yan, John C. Tuthill, Fei Wang, Brian V. Jenkins, and Jay Z. Parrish
- Subjects
Transient receptor potential channel ,Stimulus modality ,Mechanosensation ,Microtubule ,Acetylation ,Chemistry ,Sensory system ,Stimulation ,Stimulus (physiology) ,Cell biology - Abstract
At the cellular level, α-tubulin acetylation alters the structure of microtubules to render them mechanically resistant to compressive forces. How this biochemical property of microtubule acetylation relates to mechanosensation remains unknown, though prior studies have shown that microtubule acetylation plays a role in touch perception. Here, we identify the majorDrosophilaα-tubulin acetylase (dTAT) and show that it plays key roles in several forms of mechanosensation while exerting little effect on other sensory modalities. dTAT is highly expressed in neurons of the larval peripheral nervous system (PNS), but is not required for normal neuronal morphogenesis. We show that mutation of the acetylase gene or the K40 acetylation site in α-tubulin impairs mechanical sensitivity in sensory neurons and behavioral responses to gentle touch, harsh touch, gravity, and sound stimulus, but not thermal stimulus. Finally, we show that dTAT is required for mechanically-induced activation of NOMPC, a microtubule-associated transient receptor potential channel, and functions to maintain integrity of the microtubule cytoskeleton in response to mechanical stimulation.
- Published
- 2018
- Full Text
- View/download PDF
36. A Systematic Nomenclature for theDrosophilaVentral Nervous System
- Author
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David Shepherd, Richard S. Mann, David J. Merritt, Carsten Duch, Andrew M. Seeds, James W. Truman, Rod K. Murphey, John C. Tuthill, Shigehiro Namiki, Robert Court, Darren W. Williams, Troy R. Shirangi, Michael H. Dickinson, Jana Börner, Julie A. Simpson, James Douglas Armstrong, Gwyneth M Card, Marta Costa, and Wyatt Korff
- Subjects
Nervous system ,0303 health sciences ,biology ,media_common.quotation_subject ,fungi ,Adult insect ,Anatomy ,Insect ,biology.organism_classification ,Neuromere ,3. Good health ,03 medical and health sciences ,0302 clinical medicine ,Taxon ,medicine.anatomical_structure ,medicine ,Drosophila melanogaster ,Drosophila (subgenus) ,Neuroscience ,Nomenclature ,030217 neurology & neurosurgery ,030304 developmental biology ,media_common - Abstract
The fruit fly,Drosophila melanogaster, is an established and powerful model system for neuroscience research with wide relevance in biology and medicine. Until recently, research on theDrosophilabrain was hindered by the lack of a complete and uniform nomenclature. Recognising this problem, the Insect Brain Name Working Group produced an authoritative hierarchical nomenclature system for the adult insect brain, usingDrosophila melanogasteras the reference framework, with other taxa considered to ensure greater consistency and expandability (Ito et al., 2014). Here, we extend this nomenclature system to the sub-gnathal regions of the adultDrosophilanervous system, thus providing a systematic anatomical description of the ventral nervous system (VNS). This portion of the nervous system includes the thoracic and abdominal neuromeres that were not included in the original work and contains the motor circuits that play essential roles in most fly behaviours.
- Published
- 2017
- Full Text
- View/download PDF
37. Contributions of the 12 Neuron Classes in the Fly Lamina to Motion Vision
- Author
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Gerald M. Rubin, Stephen L. Holtz, Aljoscha Nern, John C. Tuthill, and Michael B. Reiser
- Subjects
Neurons ,Lamina ,Neuroscience(all) ,General Neuroscience ,Models, Neurological ,Motion Perception ,Feed forward ,Sensory system ,Motion detection ,Visual system ,Biology ,Article ,Models of neural computation ,medicine.anatomical_structure ,nervous system ,medicine ,Animals ,Drosophila ,Photoreceptor Cells, Invertebrate ,Visual Pathways ,Motion perception ,Neuron ,Neuroscience - Abstract
SummaryMotion detection is a fundamental neural computation performed by many sensory systems. In the fly, local motion computation is thought to occur within the first two layers of the visual system, the lamina and medulla. We constructed specific genetic driver lines for each of the 12 neuron classes in the lamina. We then depolarized and hyperpolarized each neuron type and quantified fly behavioral responses to a diverse set of motion stimuli. We found that only a small number of lamina output neurons are essential for motion detection, while most neurons serve to sculpt and enhance these feedforward pathways. Two classes of feedback neurons (C2 and C3), and lamina output neurons (L2 and L4), are required for normal detection of directional motion stimuli. Our results reveal a prominent role for feedback and lateral interactions in motion processing and demonstrate that motion-dependent behaviors rely on contributions from nearly all lamina neuron classes.
- Published
- 2013
- Full Text
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38. Mechanosensation and adaptive motor control in insects
- Author
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John C. Tuthill and Rachel Wilson
- Subjects
0301 basic medicine ,Insecta ,Mechanosensation ,Motor commands ,Sensation ,Motor control ,Sensory system ,Anatomy ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Article ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Stimulus modality ,Biological neural network ,Animals ,Cues ,General Agricultural and Biological Sciences ,Neuroscience ,Mechanoreceptors ,030217 neurology & neurosurgery ,Locomotion - Abstract
The ability of animals to flexibly navigate through complex environments depends on the integration of sensory information with motor commands. The sensory modality most tightly linked to motor control is mechanosensation. Adaptive motor control depends critically on an animal’s ability to respond to mechanical forces generated both within and outside the body. The compact neural circuits of insects provide appealing systems to investigate how mechanical cues guide locomotion in rugged environments. Here, we review our current understanding of mechanosensation in insects and its role in adaptive motor control. We first examine the detection and encoding of mechanical forces by primary mechanoreceptor neurons. We then discuss how central circuits integrate and transform mechanosensory information to guide locomotion. Because most studies in this field have been performed in locusts, cockroaches, crickets, and stick insects, the examples we cite here are drawn mainly from these ‘big insects’. However, we also pay particular attention to the tiny fruit fly, Drosophila, where new tools are creating new opportunities, particularly for understanding central circuits. Our aim is to show how studies of big insects have yielded fundamental insights relevant to mechanosensation in all animals, and also to point out how the Drosophila toolkit can contribute to future progress in understanding mechanosensory processing.
- Published
- 2016
39. Neural correlates of illusory motion perception in Drosophila
- Author
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M. Eugenia Chiappe, John C. Tuthill, and Michael B. Reiser
- Subjects
Male ,Time Factors ,media_common.quotation_subject ,Models, Neurological ,Motion Perception ,Illusion ,Biology ,Motion ,Illusory motion ,Neural Pathways ,Psychophysics ,Animals ,Humans ,Contrast (vision) ,Motion perception ,media_common ,Neurons ,Neural correlates of consciousness ,Multidisciplinary ,Flicker ,fungi ,Motion detection ,Dendrites ,Biological Sciences ,Drosophila melanogaster ,Female ,Neuroscience ,Algorithms - Abstract
When the contrast of an image flickers as it moves, humans perceive an illusory reversal in the direction of motion. This classic illusion, called reverse-phi motion, has been well-characterized using psychophysics, and several models have been proposed to account for its effects. Here, we show that Drosophila melanogaster also respond behaviorally to the reverse-phi illusion and that the illusion is present in dendritic calcium signals of motion-sensitive neurons in the fly lobula plate. These results closely match the predictions of the predominant model of fly motion detection. However, high flicker rates cause an inversion of the reverse-phi behavioral response that is also present in calcium signals of lobula plate tangential cell dendrites but not predicted by the model. The fly's behavioral and neural responses to the reverse-phi illusion reveal unexpected interactions between motion and flicker signals in the fly visual system and suggest that a similar correlation-based mechanism underlies visual motion detection across the animal kingdom.
- Published
- 2011
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40. Physiology and morphology of sustaining and dimming neurons of the crab Chasmagnathus granulatus (Brachyura: Grapsidae)
- Author
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Martín Berón de Astrada, John C. Tuthill, and Daniel Tomsic
- Subjects
animal structures ,Brachyura ,Physiology ,Biophysics ,Motion Perception ,Biotin ,Biology ,Midbrain ,Behavioral Neuroscience ,Animals ,Visual Pathways ,Ecology, Evolution, Behavior and Systematics ,Neurons ,Membrane potential ,Chasmagnathus ,Pulse (signal processing) ,fungi ,Excitatory Postsynaptic Potentials ,Depolarization ,Crayfish ,biology.organism_classification ,Crustacean ,Electrophysiology ,nervous system ,Visual Perception ,Animal Science and Zoology ,Photic Stimulation - Abstract
In crustaceans, sustaining (SN) and dimming (DN) neurons are readily identified by their distinct responses to a light pulse. However, morphological identification and electrophysiological characterization of these neurons has been achieved only in the crayfish. This study provides a description of SNs and DNs in a second crustacean species, the crab Chasmagnathus. SNs and DNs of the crab arborize extensively in the medulla and the axons project to the midbrain. Upon a light pulse, SNs depolarize and increase the firing rate while DNs hyperpolarize and reduce firing. These responses are highly consistent and their magnitudes depend on the intensity of the light pulse. When stimulated with a wide-field motion grating, SNs respond with a modulation of the membrane potential and spike frequency. We also characterized the responses of these neurons to a rotating e-vector of polarized light. SNs show the maximum depolarization when the e-vector approaches vertical. In contrast, DNs show maximal depolarization to near horizontal e-vector orientations. The semi-terrestrial crab and the crayfish inhabit unique light environments and exhibit disparate visual behaviors. Yet, we found that the location, morphology and physiology of SNs and DNs of the crab are nearly identical to those described in the crayfish.
- Published
- 2009
- Full Text
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41. TOWARD THE EVOLUTIONARY GENOMICS OF GAMETOPHYTIC DIVERGENCE: PATTERNS OF TRANSMISSION RATIO DISTORTION IN MONKEYFLOWER (MIMULUS) HYBRIDS REVEAL A COMPLEX GENETIC BASIS FOR CONSPECIFIC POLLEN PRECEDENCE
- Author
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Lila Fishman, John C. Tuthill, and Jan E. Aagaard
- Subjects
Inheritance Patterns ,Mimulus ,Outcrossing ,medicine.disease_cause ,Pollen ,Genetics ,medicine ,Crosses, Genetic ,Ecology, Evolution, Behavior and Systematics ,Coevolution ,Phrymaceae ,biology ,Reproduction ,Chromosome Mapping ,Genetic Variation ,Genomics ,Reproductive isolation ,biology.organism_classification ,Mating system ,Biological Evolution ,Genetics, Population ,Evolutionary biology ,Hybridization, Genetic ,Pollen tube ,General Agricultural and Biological Sciences - Abstract
Conspecific pollen precedence (CPP) is a major component of reproductive isolation between many flowering plant taxa and may reveal mechanisms of gametophytic evolution within species, but little is known about the genetic basis and evolutionary history of CPP. We systematically investigated the genetic architecture of CPP using patterns of transmission ratio distortion (TRD) in F2 and backcross hybrids between closely related species of Mimulus (Phrymaceae) with divergent mating systems. We found that CPP in Mimulus hybrids was polygenic and was the majority source of interspecific TRD genome-wide, with at least eight genomic regions contributing to the transmission advantage of M. guttatus pollen grains on M. guttatus styles. In aggregate, these male-specific transmission ratio distorting loci (TRDLs) were more than sufficient to account for the 100% precedence of pure M. guttatus pollen over M. nasutus pollen in mixed pollinations of M. guttatus. All but one of these pollen TRDLs were style-dependent; that is, we observed pollen TRD in F(1) and/or M. guttatus styles, but not in M. nasutus styles. These findings suggest that species-specific differences in pollen tube performance accumulate gradually and may have been driven by coevolution between pollen and style in the predominantly outcrossing M. guttatus.
- Published
- 2008
- Full Text
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42. Polarization sensitivity in the red swamp crayfish Procambarus clarkii enhances the detection of moving transparent objects
- Author
-
John C. Tuthill and Sönke Johnsen
- Subjects
Light ,Physiology ,Movement ,Escape response ,Astacoidea ,Aquatic Science ,Signal crayfish ,Swamp ,Optics ,Escape Reaction ,Animals ,Molecular Biology ,Vision, Ocular ,Ecology, Evolution, Behavior and Systematics ,Procambarus clarkii ,geography ,Birefringence ,geography.geographical_feature_category ,biology ,business.industry ,biology.organism_classification ,Polarization (waves) ,Crayfish ,Insect Science ,Animal Science and Zoology ,business - Abstract
SUMMARY We tested the hypothesis that polarization sensitivity enhances the detection of moving, transparent objects by examining the escape response of the red swamp crayfish (Procambarus clarkii Girard) from a visual threat. A transparent, birefringent target trans-illuminated by either partially linear polarized or unpolarized light was advanced toward individual crayfish. The optical axis of the target was aligned such that it would be conspicuous to a viewer with polarization sensitivity when trans-illuminated by polarized light. Under polarized light, significantly more crayfish retreated from the target than under unpolarized light of identical intensity(P
- Published
- 2006
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- View/download PDF
43. What's on the vibrissa abscissa?
- Author
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John C. Tuthill
- Subjects
0301 basic medicine ,Communication ,Physiology ,business.industry ,Whiskers ,media_common.quotation_subject ,Abscissa ,Art ,Anatomy ,Aquatic Science ,03 medical and health sciences ,symbols.namesake ,030104 developmental biology ,Insect Science ,symbols ,Animal Science and Zoology ,business ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,media_common - Abstract
[Graphic][1] The face of a rat is peppered with stiff, conical hairs called vibrissae, more commonly known as whiskers. As nocturnal animals that live in dingy, cramped hovels, rats rely on tactile information from their whiskers to get through the night. Using just their whiskers, they can
- Published
- 2016
- Full Text
- View/download PDF
44. Wide-field feedback neurons dynamically tune early visual processing
- Author
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Aljoscha Nern, John C. Tuthill, Gerald M. Rubin, and Michael B. Reiser
- Subjects
Cell type ,Photic Stimulation ,Neuroscience(all) ,Green Fluorescent Proteins ,Motion Perception ,Sensory system ,Tetrodotoxin ,Biology ,Luminance ,Choline O-Acetyltransferase ,Membrane Potentials ,Visual processing ,Animals, Genetically Modified ,Feedback, Sensory ,Animals ,Drosophila Proteins ,Visual Pathways ,Anesthetics, Local ,Octopamine ,Neurons ,General Neuroscience ,Brain ,Motion detection ,Electrophysiology ,Flight, Animal ,Drosophila ,Neural coding ,Neuroscience ,Adrenergic alpha-Agonists ,Transcription Factors - Abstract
SummaryAn important strategy for efficient neural coding is to match the range of cellular responses to the distribution of relevant input signals. However, the structure and relevance of sensory signals depend on behavioral state. Here, we show that behavior modifies neural activity at the earliest stages of fly vision. We describe a class of wide-field neurons that provide feedback to the most peripheral layer of the Drosophila visual system, the lamina. Using in vivo patch-clamp electrophysiology, we found that lamina wide-field neurons respond to low-frequency luminance fluctuations. Recordings in flying flies revealed that the gain and frequency tuning of wide-field neurons change during flight, and that these effects are mimicked by the neuromodulator octopamine. Genetically silencing wide-field neurons increased behavioral responses to slow-motion stimuli. Together, these findings identify a cell type that is gated by behavior to enhance neural coding by subtracting low-frequency signals from the inputs to motion detection circuits.
- Published
- 2014
45. A framework for fatalism in the fly
- Author
-
John C. Tuthill
- Subjects
Psychoanalysis ,Amor fati ,Physiology ,media_common.quotation_subject ,Fatalism ,Aquatic Science ,Existentialism ,Idealism ,Insect Science ,Animal Science and Zoology ,Psychology ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,media_common - Abstract
[Graphic][1] Friedrich Nietzsche was horrified by the concept of eternal recurrence, the possibility that the universe repeats itself infinitely in structure and experience. As a solution to this existential burden, Nietzsche proposed that man abandon idealism and embrace amor fati – a
- Published
- 2015
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46. Begrudging the bat
- Author
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John C. Tuthill
- Subjects
Physiology ,Insect Science ,media_common.quotation_subject ,Zoology ,Animal Science and Zoology ,Aquatic Science ,Reproduction ,Biology ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,media_common - Abstract
[Figure][1] Man has long envied the august lifestyle of the soaring bat. As our closest living relative with the ability to fly, the bat enjoys all the perks of placental mammal-hood (i.e. a pleasantly warm internal body temperature and the convenience of internal reproduction), without
- Published
- 2015
- Full Text
- View/download PDF
47. Muscles antagonize their neighbors' spindles
- Author
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John C. Tuthill
- Subjects
Nervous system ,Communication ,Physiology ,business.industry ,Microneurography ,Aquatic Science ,Biology ,medicine.anatomical_structure ,Insect Science ,medicine ,Animal Science and Zoology ,business ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics - Abstract
Because of the practical and ethical problems of experimenting on humans, it is very difficult to directly study the physiology of the intact human nervous system. However, there is one unusual (but safe) method for recording from single neurons in humans. This technique, called microneurography
- Published
- 2015
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- View/download PDF
48. This is Cerebrospinal Tap
- Author
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John C. Tuthill
- Subjects
0301 basic medicine ,Nervous system ,Physiology ,business.industry ,Anatomy ,Aquatic Science ,Ventricular system ,Spinal cord ,03 medical and health sciences ,030104 developmental biology ,Cerebrospinal fluid ,medicine.anatomical_structure ,Insect Science ,Anesthesia ,cardiovascular system ,Medicine ,Animal Science and Zoology ,business ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics - Abstract
[Graphic][1] Of all the fluids produced by the human body, the cerebrospinal fluid (CSF) may be the least offensive. A clear, unassuming liquid, CSF circulates throughout the ventricular system of the brain and the central canal of the spinal cord, cushioning the nervous system from injury
- Published
- 2016
- Full Text
- View/download PDF
49. The odds of rolling snake eyes
- Author
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John C. Tuthill
- Subjects
0106 biological sciences ,0301 basic medicine ,genetic structures ,Physiology ,Color vision ,Anatomy ,Aquatic Science ,Biology ,010603 evolutionary biology ,01 natural sciences ,eye diseases ,03 medical and health sciences ,030104 developmental biology ,Snake eyes ,Insect Science ,Animal Science and Zoology ,sense organs ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics - Abstract
[Graphic][1] Most vertebrate retinas are composed of two types of photoreceptors: rods, for dim light vision, and cones, for color vision under brighter conditions. However, several interesting exceptions to this duplex organization are seen in the squamate reptiles, a scaly group that
- Published
- 2016
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50. How crabs enjoy a hot meal
- Author
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John C. Tuthill
- Subjects
0301 basic medicine ,Meal ,Communication ,biology ,Physiology ,business.industry ,Aquatic Science ,biology.organism_classification ,Crustacean ,Fishery ,03 medical and health sciences ,030104 developmental biology ,Insect Science ,Animal Science and Zoology ,Business ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics - Abstract
[Graphic][1] Crabs are renowned for their cranky demeanor, but when one considers the extreme conditions under which they must survive, it becomes easier to sympathize with these crotchety crustaceans. One hardship that crabs must endure is changing temperature: a daily swing of 20°C is not
- Published
- 2016
- Full Text
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