495 results on '"Jackson JA"'
Search Results
2. Bias‐Eliminating Techniques in the Computation of Power Spectra for Characterizing Gravity Waves: Interleaved Methods and Error Analyses
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Jackson Jandreau and Xinzhao Chu
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Lidar ,error analysis ,gravity waves ,interleaved method ,variance and covariance ,potential energy density ,Astronomy ,QB1-991 ,Geology ,QE1-996.5 - Abstract
Abstract Observational data inherently contain noise which manifests as uncertainties in the measured parameters and creates positive biases or noise floors in second‐order products like variances, fluxes, and spectra. Historical methods estimate and subsequently subtract noise floors, but struggle with accuracy. Gardner and Chu (2020, doi.org/10.1364/AO.400375) proposed an interleaved data processing method, which inherently eliminates biases from variances and fluxes, and suggested that the method could also eliminate noise floors of power spectra. We investigate the interleaved method for spectral analysis of atmospheric waves through theoretical studies, forward modeling, and demonstration with lidar data. Our work shows that calculating the cross‐power spectral density (CPSD) from two interleaved subsamples does reduce the spectral noise floor significantly. However, only the Co‐PSD (the real part of CPSD) eliminates the noise floor completely, while taking the absolute magnitude of CPSD adds a reduced noise floor back to the spectrum when the sample number is finite. This reduced noise floor can be further minimized through averaging over more observations, completely different from traditional spectrum calculations whose noise floor cannot be reduced by incorporating more samples. We demonstrate the first application of the interleaved method to spectral data, successfully eliminating the noise floor using the Co‐PSD in a forward model and in lidar observations of the vertical wavenumber of gravity waves at McMurdo, Antarctica. This high accuracy is gained by sacrificing precision due to photon‐count splitting, requiring additional observations to counter this effect. We provide quantitative assessment of accuracy and precision as well as application recommendations.
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- 2024
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3. Some observations on meaningful and objective inference in radioecological field studies
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Jackson, JA, Antwis, RE, Beresford, Nicholas A., and Wood, M
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Mammals ,Bacteria ,Animals ,Animal Science and Zoology ,Ecology and Environment ,Ecology, Evolution, Behavior and Systematics ,Gastrointestinal Microbiome - Abstract
1. Anthropogenic releases of radiation are of ongoing importance for environmental protection, but the radiation doses at which natural systems begin to show effects are controversial. More certainty is required in this area to achieve optimal regulation for radioactive substances. We recently carried out a large survey (268 sampled animals and 20 sites) of the association between environmental radiation exposures and small mammal gut-associated microbiomes (fungal and bacterial) in the Chornobyl Exclusion zone (CEZ). Using individual measurements of total absorbed dose rates and a study design and analyses that accounted for spatial non-independence, we found no, or only limited, association. 2. Watts et al. have criticised our study: for not filtering candidate non-resident components prior to our fungal microbiome analyses, for our qualified speculations on the relative merits of faecal and gut samples, and for the design of our study which they felt lacked sufficient replication. 3. The advantage of filtering non-resident-fungal taxa is not clear and it would not have changed the null (spatially adjusted) association we found between radioactive dose and mycobiome composition because the most discriminatory fungal taxa with regard to dose were non-resident taxa. 4. We maintain that it was legitimate for us to make qualified discussion comments on the differences in results between our faecal and gut microbiome analyses and on the relative merits of these sample types. 5. Most importantly, the criticism of our study design by Watts et al. and the designs and analysis of their recent studies in the CEZ show a misunderstanding of the true nature of independent replication in field studies. Recognising the importance of spatial non-independence is essential in the design and analysis of radioecological field surveys.
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- 2022
4. TLX3 regulates CGN progenitor proliferation during cerebellum development and its dysfunction can lead to autism
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Surendran Parvathy, Budhaditya Basu, Suresh Surya, Rahul Jose, Vadakkath Meera, Paul Ann Riya, Nair Pradeep Jyothi, Rajendran Sanalkumar, Viviane Praz, Nicolò Riggi, Biju Surendran Nair, Kamalesh K. Gulia, Mukesh Kumar, Balachandran Krishnamma Binukumar, and Jackson James
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Neuroscience ,Molecular Neuroscience ,Cellular Neuroscience ,Omics ,Transcriptomics ,Science - Abstract
Summary: Tlx3, a master regulator of the fate specification of excitatory neurons, is primarily known to function in post-mitotic cells. Although we have previously identified TLX3 expression in the proliferating granule neuron progenitors (GNPs) of cerebellum, its primary role is unknown. Here, we demonstrate that the dysfunction of Tlx3 from the GNPs significantly reduced its proliferation through regulating anti-proliferative genes. Consequently, the altered generation of GNPs resulted in cerebellar hypoplasia, patterning defects, granule neuron-Purkinje ratio imbalance, and aberrant synaptic connections in the cerebellum. This altered cerebellar homeostasis manifested into a typical autism-like behavior in mice with motor, and social function disabilities. We also show the presence of TLX3 variants with uncharacterized mutations in human cases of autism spectrum disorder (ASD). Altogether, our study establishes Tlx3 as a critical gene involved in developing GNPs and that its deletion from the early developmental stage culminates in autism.
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- 2024
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5. Population abundance of recovering humpback whales Megaptera novaeangliae and other baleen whales in the Scotia Arc, South Atlantic
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Baines, M, primary, Kelly, N, additional, Reichelt, M, additional, Lacey, C, additional, Pinder, S, additional, Fielding, S, additional, Murphy, E, additional, Trathan, P, additional, Biuw, M, additional, Lindstrøm, U, additional, Krafft, BA, additional, and Jackson, JA, additional
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- 2021
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6. Low mitochondrial genetic diversity in the Indian Ocean humpback dolphin Sousa plumbea in South African waters
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Lampert, S, primary, Ingle, RA, additional, Jackson, JA, additional, Gopal, K, additional, and Plön, S, additional
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- 2021
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7. The Southern Zagros Collisional Orogen: New Insights From Transdimensional Trees Inversion of Seismic Noise
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Pilia, S, Jackson, J, Hawkins, R, Kaviani, A, Ali, M, Pilia S, Jackson JA, Hawkins R, Kaviani A, Ali MY, Pilia, S, Jackson, J, Hawkins, R, Kaviani, A, Ali, M, Pilia S, Jackson JA, Hawkins R, Kaviani A, and Ali MY
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Imaging and resolving the lateral continuity of 3-D crustal structures enhance our ability to interpret seismicity and to understand how orogens are created. We apply a Bayesian, hierarchical inversion approach based on a transdimensional trees-structured wavelet parameterization to recover phase velocity maps at 2–40 s periods. We then invert phase velocity dispersion to constrain a 3-D shear velocity model of the crust beneath south-central Iran. Together with accurate earthquake centroid depths and focal mechanisms, the pattern of 3-D velocity variations supports recent suggestions that most large earthquakes in the Zagros occur within the lower sedimentary cover or close to the sediment-basement interface. Furthermore, we find evidence for Arabian basement underthrusting beneath central Iran, although only in one location does it appear to generate earthquakes. Our new 3-D tomographic model clarifies and throws new light on the crustal structure of the SE Zagros and its relation to seismicity and active faulting.
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- 2020
8. Signs and symptoms of illness in early infancy: associations with sudden infant death
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Wailoo, M, Thompson, JR, Waite, AJ, Coombs, RC, and Jackson, JA
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Children -- Diseases ,Sudden infant death syndrome -- Health aspects -- Causes of -- Prevention -- Care and treatment -- Research -- Diagnosis ,Infants -- Health aspects -- Diseases -- Care and treatment -- Research ,Sick children -- Health aspects -- Care and treatment -- Research ,Family and marriage ,Health ,Diagnosis ,Diseases ,Prevention ,Care and treatment ,Research ,Health aspects ,Causes of - Abstract
Aims: to describe a pattern of illness in 'normal' infants, and to assess to what extent this may differ in infants who die suddenly and unexpectedly. Methods: All infants are [...]
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- 2003
9. Intergenerational Support and Reciprocity Between Low-Income African American Fathers and Their Aging Mothers
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Roy, Kevin M., primary, Dyson, Omari L., additional, and Jackson, Ja-Nee, additional
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- 2010
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10. Tomorrowʼs paediatricians: factors influencing graduating doctors in choosing a career in paediatrics
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Stevens, DJ, Mason, JD, Jackson, JA, Kynoch, J, and Hotton, EJ
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- 2012
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11. South Georgia blue whales five decades after the end of whaling
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Calderan, SV, primary, Black, A, additional, Branch, TA, additional, Collins, MA, additional, Kelly, N, additional, Leaper, R, additional, Lurcock, S, additional, Miller, BS, additional, Moore, M, additional, Olson, PA, additional, Širović, A, additional, Wood, AG, additional, and Jackson, JA, additional
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- 2020
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12. Have whales returned to a historical hotspot of industrial whaling? The pattern of southern right whale Eubalaena australis recovery at South Georgia
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Jackson, JA, primary, Kennedy, A, additional, Moore, M, additional, Andriolo, A, additional, Bamford, CCG, additional, Calderan, S, additional, Cheeseman, T, additional, Gittins, G, additional, Groch, K, additional, Kelly, N, additional, Leaper, R, additional, Leslie, MS, additional, Lurcock, S, additional, Miller, BS, additional, Richardson, J, additional, Rowntree, V, additional, Smith, P, additional, Stepien, E, additional, Stowasser, G, additional, Trathan, P, additional, Vermeulen, E, additional, Zerbini, AN, additional, and Carroll, EL, additional
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- 2020
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13. Occupational biomechanical risk factors for radial nerve entrapment in a 13-year prospective study among male construction workers
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Jackson, JA, Olsson, D, Burdorf, Lex, Punnett, L, Jarvholm, B, Wahlstrom, J, Jackson, JA, Olsson, D, Burdorf, Lex, Punnett, L, Jarvholm, B, and Wahlstrom, J
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- 2019
14. Occupational biomechanical risk factors for surgically treated ulnar nerve entrapment in a prospective study of male construction workers
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Jackson, JA, Olsson, D, Punnett, L, Burdorf, Lex, Jarvholm, B, Wahlstrom, J, Jackson, JA, Olsson, D, Punnett, L, Burdorf, Lex, Jarvholm, B, and Wahlstrom, J
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- 2019
15. Physical cues controlling seasonal immune allocation in a naturally-occurring vertebrate
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Stewart, A, Hablützel, PI, Watson, HV, Brown, M, Friberg, IM, Cable, J, and Jackson, JA
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Seasonal patterns in immunity are frequently observed in vertebrates but are poorly understood. Here we focussed on a natural piscine model, the three-spined stickleback (Gasterosteus aculeatus), and asked how seasonal immune allocation is driven by physical variables (time, light and heat). Using functionally-relevant gene expression metrics as a reporter of seasonal immune allocation we synchronously sampled fish monthly from the wild (two habitats), and from semi-natural outdoors mesocosms (stocked from one of the wild habitats). This was repeated across two annual cycles, with continuous within-habitat monitoring of environmental temperature and implementing a manipulation of temperature in the mesocosms. We also conducted a long-term laboratory experiment, subjecting acclimated wild fish to natural and accelerated (× 2) photoperiodic change at 7 and 15°C. The laboratory experiment demonstrated that immune allocation was independent of photoperiod and only a very modest effect, at most, was controlled by a tentative endogenous circannual rhythm. On the other hand, experimentally-determined thermal effects were able to quantitatively predict much of the summer-winter fluctuation observed in the field and mesocosms. Importantly, however, temperature was insufficient to fully predict, and occasionally was a poor predictor of, natural patterns. Thermal effects can thus be over-ridden by other (unidentified) natural environmental variation and do not take the form of an unavoidable constraint due to cold-blooded physiology. This is consistent with a context-dependent strategic control of immunity in response to temperature variation, and points to the existence of temperature-sensitive regulatory circuits that might be conserved in other vertebrates.
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- 2018
16. Immunology in wild nonmodel rodents: an ecological context for studies of health and disease
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Jackson, JA
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Th‐2 ,PRR ,immunoregulation ,Systems biology ,Immunology ,Animals, Wild ,Rodentia ,Disease ,Biology ,Commissioned Review Article ,Infections ,Human health ,Immune system ,Immunity ,Animals ,Review Articles ,disease ,immunoepidemiology ,Individual heterogeneity ,Ecology ,Gene Expression Profiling ,rodent ,biochemical phenomena, metabolism, and nutrition ,Phenotype ,Infectious disease (medical specialty) ,Animals, Domestic ,bacteria ,Gene-Environment Interaction ,Parasitology - Abstract
Transcriptomic methods are set to revolutionize the study of\ud the immune system in naturally occurring nonmodel organisms.\ud With this in mind, the present article focuses on ways in which the use of ‘nonmodel’ rodents (not the familiar laboratory species) can advance studies into the classical, but ever relevant, epidemiologic triad of immune defence, infectious disease and environment. For example, naturally occurring rodents are an interesting system in which to study the environmental stimuli that drive the development and homeostasis of the immune system and, by extension, to\ud identify where these stimuli are altered in anthropogenic\ud environments leading to the formation of immunopathological\ud phenotypes. Measurement of immune expression may help define individual heterogeneity in infectious disease susceptibility and transmission and facilitate our understanding of infection dynamics and risk in the natural environment; furthermore, it may provide a means of surveillance that can filter individuals carrying previously unknown acute infections of potential ecological or zoonotic importance. Finally, the study of immunology in wild animals may reveal interactions within the immune system and between immunity and other organismal traits that are not observable under restricted laboratory conditions. Potentiating much of this is the possibility of combining gene expression profiles with analytical tools derived from ecology and systems biology to reverse engineer interaction networks between immune responses, other organismal traits and the environment (including symbiont exposures), revealing regulatory architecture.\ud Such holistic studies promise to link ecology, epidemiology\ud and immunology in natural systems in a unified approach that can illuminate important problems relevant to\ud human health and animal welfare and production.
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- 2015
17. An endemic hantavirus in field voles in northern England
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Thomason, AG, Begon, M, Bradley, JE, Paterson, S, and Jackson, JA
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viruses ,animal diseases - Abstract
We report a PCR survey of hantavirus infection in the extensive field vole (Microtus agrestis) populations occurring in the Kielder Forest, northern England. A Tatenale virus-like lineage was frequently detected (~ 15% prevalence) in liver tissue. Such lineages are likely to be endemic in northern England.
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- 2017
18. A Synergistic Approach for Evaluating Climate Model Output for Ecological Applications
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Cavanagh, RD, Murphy, EJ, Bracegirdle, TJ, Turner, J, Knowland, CA, Corney, SP, Smith, WO Jr, Waluda, CM, Johnston, NM, Bellerby, RGJ, Constable, AJ, Costa, DP, Hofmann, EE, Jackson, JA, Staniland, IA, Wolf-Gladrow, Dieter, Xavier, JA, Cavanagh, RD, Murphy, EJ, Bracegirdle, TJ, Turner, J, Knowland, CA, Corney, SP, Smith, WO Jr, Waluda, CM, Johnston, NM, Bellerby, RGJ, Constable, AJ, Costa, DP, Hofmann, EE, Jackson, JA, Staniland, IA, Wolf-Gladrow, Dieter, and Xavier, JA
- Abstract
Increasing concern about the impacts of climate change on ecosystems is prompting ecologists and ecosystem managers to seek reliable projections of physical drivers of change. The use of global climate models in ecology is growing, although drawing ecologically meaningful conclusions can be problematic. The expertise required to access and interpret output fromclimate and earth systemmodels is hampering progress in utilizing them most effectively to determine the wider implications of climate change. To address this issue, we present a joint approach between climate scientists and ecologists that explores key challenges and opportunities for progress. As an exemplar, our focus is the Southern Ocean, notable for significant change with global implications, and on sea ice, given its crucial role in this dynamic ecosystem. We combined perspectives to evaluate the representation of sea ice in global climate models. With an emphasis on ecologically-relevant criteria (sea ice extent and seasonality) we selected a subset of eight models that reliably reproduce extant sea ice distributions. While the model subset shows a similar mean change to the full ensemble in sea ice extent (approximately 50% decline in winter and 30% decline in summer), there is a marked reduction in the range. This improved the precision of projected future sea ice distributions by approximately one third, and means they are more amenable to ecological interpretation. We conclude that careful multidisciplinary evaluation of climate models, in conjunction with ongoing modeling advances, should form an integral part of utilizing model output.
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- 2017
19. Peer Review #1 of "Movements and use of space by Mangrove Cuckoos (Coccyzus minor) in Florida, USA (v0.3)"
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Jackson, JA, additional
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- 2017
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20. An Immunological Marker of Tolerance to Infection in Wild Rodents
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Jackson, JA, Hall, AJ, Friberg, IM, Ralli, C, Lowe, A, Zawadzka, M, Turner, AK, Stewart, A, Birtles, RJ, Paterson, S, Bradley, JE, Begon, M, and Schneider, David S.
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Male ,QH301-705.5 ,Arvicolinae ,Immunology ,Ecology and Environmental Sciences ,Biology and Life Sciences ,health_and_wellbeing ,Animals, Wild ,GATA3 Transcription Factor ,Host-Parasite Interactions ,Cross-Sectional Studies ,Immune Tolerance ,Parasitic Diseases ,Animals ,sense organs ,Longitudinal Studies ,Biology (General) ,Research Article - Abstract
A large-scale field study in naturally occurring vole populations identified gene expression changes over time and demonstrates how wild mammals exhibit tolerance to chronic parasite infections., Hosts are likely to respond to parasitic infections by a combination of resistance (expulsion of pathogens) and tolerance (active mitigation of pathology). Of these strategies, the basis of tolerance in animal hosts is relatively poorly understood, with especially little known about how tolerance is manifested in natural populations. We monitored a natural population of field voles using longitudinal and cross-sectional sampling modes and taking measurements on body condition, infection, immune gene expression, and survival. Using analyses stratified by life history stage, we demonstrate a pattern of tolerance to macroparasites in mature compared to immature males. In comparison to immature males, mature males resisted infection less and instead increased investment in body condition in response to accumulating burdens, but at the expense of reduced reproductive effort. We identified expression of the transcription factor Gata3 (a mediator of Th2 immunity) as an immunological biomarker of this tolerance response. Time series data for individual animals suggested that macroparasite infections gave rise to increased expression of Gata3, which gave rise to improved body condition and enhanced survival as hosts aged. These findings provide a clear and unexpected insight into tolerance responses (and their life history sequelae) in a natural vertebrate population. The demonstration that such responses (potentially promoting parasite transmission) can move from resistance to tolerance through the course of an individual's lifetime emphasises the need to incorporate them into our understanding of the dynamics and risk of infection in the natural environment. Moreover, the identification of Gata3 as a marker of tolerance to macroparasites raises important new questions regarding the role of Th2 immunity and the mechanistic nature of the tolerance response itself. A more manipulative, experimental approach is likely to be valuable in elaborating this further., Author Summary Hosts do not always resist parasites. And once infection establishes, relatively little is known of how naturally occurring hosts tolerate (mitigate for) adverse effects, or what the life history consequences of this tolerance may be. In this article we demonstrate a pattern of tolerance to parasitic worms and arthropods in wild voles and link this to increased expression of an immunological biomarker. The biomarker, Gata3, is triggered by infection, precedes significant changes in body condition, and impacts on fecundity and survival. These results point to the considerable ecological importance of tolerance in wild vertebrates and to how poorly it is understood, while at the same time giving a new perspective on the natural function of immune response pathways involving Gata3.
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- 2014
21. Host-parasite biology in the real world: the field voles of Kielder
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Turner, AK, Beldomenico, PM, Bown, K, Burthe, SJ, Jackson, JA, Lambin, X, and Begon, M
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Ciencias Veterinarias ,infectious disease ,other ,field vole ,dynamics ,Ecology and Environment ,Biology and Microbiology ,host ,CIENCIAS AGRÍCOLAS ,Otras Ciencias Veterinarias ,parasite ,Microtus agrestis ,Kielder ,purl.org/becyt/ford/4.3 [https] ,purl.org/becyt/ford/4 [https] - Abstract
Research on the interactions between the field voles (Microtus agrestis) of Kielder Forest and their natural parasites dates back to the 1930s. These early studies were primarily concerned with understanding how parasites shape the characteristic cyclic population dynamics of their hosts. However, since the early 2000s, research on the Kielder field voles has expanded considerably and the system has now been utilized for the study of host–parasite biology across many levels, including genetics, evolutionary ecology, immunology and epidemiology. The Kielder field voles therefore represent one of the most intensely and broadly studied natural host–parasite systems, bridging theoretical and empirical approaches to better understand the biology of infectious disease in the real world. This article synthesizes the body of work published on this system and summarizes some important insights and general messages provided by the integrated and multidisciplinary study of host–parasite interactions in the natural environment. Fil: Turner, A. K.. University of Liverpool; Reino Unido Fil: Beldomenico, Pablo Martín. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Ciencias Veterinarias del Litoral. Universidad Nacional del Litoral. Facultad de Cs.veterinarias. Instituto de Ciencias Veterinarias del Litoral; Argentina. University of Liverpool; Reino Unido Fil: Bown, K.. University of Liverpool; Reino Unido. University of Salford; Reino Unido Fil: Burthe, S. J.. University of Liverpool; Reino Unido. Natural Environmental Research Council. Centre for Ecology & Hydrology; Reino Unido Fil: Jackson, J. A.. University of Liverpool; Reino Unido. University of Aberystwyth. Institute of Biological, Environmental and Rural Sciences; Reino Unido Fil: Lambin, X.. University Of Aberdeen; Reino Unido Fil: Begon, M.. University of Liverpool; Reino Unido
- Published
- 2014
22. Analysis of parasite host-switching: limitations on the use of phylogenies
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Jackson Ja
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Colonisation ,Infectious Diseases ,Cospeciation ,Ecology ,Phylogenetics ,Parasite hosting ,Inference ,Animal Science and Zoology ,Parasitology ,Biological evolution ,Biology ,Generalist and specialist species ,Host specificity - Abstract
SUMMARYEven the most generalist parasites usually occur in only a subset of potential host species, a tendency which reflects overriding environmental constraints on their distributions in nature. The periodic shifting of these limitations represented by host-switches may have been an important process in the evolution of many host-parasite assemblages. To study such events, however, it must first be established where and when they have occurred. Past host-switches within a group of parasites are usually inferred from a comparison of the parasite phylogeny with that of the hosts. Congruence between the phylogenies is often attributed to a history of association by descent with cospeciation, and incongruence to host-switching or extinction in ‘duplicated’ parasite lineages (which diverged without a corresponding branching of the host tree). The inference of host-switching from incongrucnt patterns is discussed. Difficulties arise because incongruence can frequently be explained by different combinations of biologically distinct events whose relative probabilities are uncertain. Also, the models of host parasite relationships implicit in historical reconstructions may often not allow for plausible sources of incongruence other than host-switching or duplication/extinction, or for the possibility that colonization could, in some circumstances, be disguised by ‘false’ congruence.
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- 1999
23. Bone Resorption in Ameloblastoma and Its Underlying Mechanism
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Jackson Jackson, Johni Halim, Rezky Anggraeni, and Ferry Sandra
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Ameloblastoma, a tumor located in the jaw, grows slowly but locally invasive. Ameloblastoma expands in the jaw based on a mechanism resorbing the surrounding bone. To date, the bone resorption mechanisms of ameloblastoma are associated with the expression of receptor activator of nuclear factor (NF)-κB (RANK) ligand (RANKL), matrix metalloproteinases (MMPs), and tumor necrosis factor (TNF)-α. RANKL plays an important role in generating osteoclastogenesis. MMPs degrade the extracellular matrix. TNF-α can induce the formation of osteoclast and modulate the MMPs. In this review the bone resorption mechanism of ameloblastoma as well its signaling pathway will be disclosed. Keywords: Ameloblastoma, RANKL, MMPs, TNF-α.
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- 2021
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24. Earthquake distribution patterns in Africa: their relationship to variations in lithospheric and geological structure, and their rheological implications
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Craig, TJ, Jackson, JA, Priestley, K, and McKenzie, D
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We use teleseismic waveform inversion, along with depth phase analysis, to constrain the centroid depths and source parameters of large African earthquakes. The majority of seismic activity is concentrated along the East African Rift System, with additional active regions along stretches of the continental margins in north and east Africa, and in the Congo Basin. We examine variations in the seismogenic thickness across Africa, based on a total of 227 well-determined earthquake depths, 112 of which are new to this study. Seismogenic thickness varies in correspondence with lithospheric thickness, as determined from surface wave tomography, with regions of thick lithosphere being associated with seismogenic thicknesses of up to 40 km. In regions of thin lithosphere, the seismogenic thickness is typically limited to ≤20 km. Larger seismogenic thicknesses also correlate with regions that have dominant tectonothermal ages of ≥1500 Ma, where the East African Rift passes around the Archean cratons of Africa, through the older Proterozoic mobile belts. These correlations are likely to be related to the production, affected by method and age of basement formation, and preservation, affected by lithospheric thickness, of a strong, anhydrous lower crust. The Congo Basin contains the only compressional earthquakes in the continental interior. Simple modelling of the forces induced by convective support of the African plate, based on long-wavelength free-air gravity anomalies, indicates that epeirogenic effects are sufficient to account for the localization and occurrence of both extensional and compressional deformation in Africa. Seismicity along the margins of Africa reflects a mixture between oceanic and continental seismogenic characteristics, with earthquakes in places extending to 40 km depth.
- Published
- 2011
25. Assessing the design and power of capture-recapture studies to estimate demographic parameters for the Endangered Oceania humpback whale population
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Carroll, EL, primary, Brooks, L, additional, Baker, CS, additional, Burns, D, additional, Garrigue, C, additional, Hauser, N, additional, Jackson, JA, additional, Poole, MM, additional, and Fewster, RM, additional
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- 2015
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26. On the efficacy and safety of vaccination with live tachyzoites of Neospora caninum for prevention of Neospora-associated fetal loss in cattle
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Weber, FH, Jackson, JA, Sobecki, B, Choromanski, L, Olsen, M, Meinert, T, Frank, R, Reichel, MP, Ellis, JT, Weber, FH, Jackson, JA, Sobecki, B, Choromanski, L, Olsen, M, Meinert, T, Frank, R, Reichel, MP, and Ellis, JT
- Abstract
Infection of cattle with Neospora caninum may result in abortion or the birth of a congenitally infected calf. Vaccination with live N. caninum protects against experimental infection of cattle and mice, and the naturally attenuated Nc-Nowra strain of N. caninum is of particular interest as a potential vaccine candidate. Vaccination of heifers prior to breeding with live Nc-Nowra tachyzoites by either the subcutaneous or the intravenous route reduced the rate of abortion and the presence of the parasite in calves as determined by PCR and serology after infection of cows with a virulent isolate. Protected fractions were 55.6% to 85.2% depending on the route of vaccination and growth conditions of the vaccine strain, with cryopreserved Nc-Nowra tachyzoites being less effective, with a 25.9% protected fraction. Vaccination appeared to reduce the rate of pregnancy after artificial insemination in some groups compared to nonvaccinated, nonchallenged controls. One animal that was vaccinated but not challenged experienced an abortion, but Nc-Nowra could not be detected in any of the cows in this group or their progeny. This study confirms that live vaccination can be an effective method of preventing neosporosis in cattle and yet highlights the technical hurdle of preservation of live parasites that must be overcome for a vaccine to be commercially successful. Copyright © 2013, American Society for Microbiology. All Rights Reserved.
- Published
- 2013
27. Comparison of Three Methodologies for Removal of Random‐Noise‐Induced Biases From Second‐Order Statistical Parameters of Lidar and Radar Measurements
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Jackson Jandreau and Xinzhao Chu
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lidar ,radar ,gravity waves ,interleaved method ,variance and covariance ,potential energy density ,Astronomy ,QB1-991 ,Geology ,QE1-996.5 - Abstract
Abstract Random‐noise‐induced biases are inherent issues to the accurate derivation of second‐order statistical parameters (e.g., variances, fluxes, energy densities, and power spectra) from lidar and radar measurements. We demonstrate here for the first time an altitude‐interleaved method for eliminating such biases, following the original proposals by Gardner and Chu (2020, https://doi.org/10.1364/ao.400375) who demonstrated a time‐interleaved method. Interleaving in altitude bins provides two statistically independent samples over the same time period and nearly the same altitude range, thus enabling the replacement of variances that include the noise‐induced biases with covariances that are intrinsically free of such biases. Comparing the interleaved method with previous variance subtraction (VS) and spectral proportion (SP) methods using gravity wave potential energy density calculated from Antarctic lidar data and from a forward model, this study finds the accuracy and precision of each method differing in various conditions, each with its own strengths and weakness. VS performs well in high‐SNR, yet its accuracy fails at lower‐SNR as it often yields negative values. SP is accurate and precise under high‐SNR, remaining accurate in worse conditions than VS would, yet develops a positive bias under low‐SNR. The interleaved method is accurate in all SNRs but requires a large number of samples to drive random‐noise terms in covariances toward zero and to compensate for the reduced precision due to the splitting of return signals. Therefore, selecting the proper bias removal/elimination method for actual signal and sample conditions is crucial in utilizing lidar/radar data, as neglecting this can conceal trends or overstate atmospheric variability.
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- 2022
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28. Fatal Pulmonary Thromboembolism After Successful Transsphenoidal Hypophysectomy for Cushingʼs Disease
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Jackson Ja, Smigiel M, and Trowbridge A
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17-Hydroxycorticosteroids ,Adult ,Transsphenoidal hypophysectomy ,medicine.medical_specialty ,Hydrocortisone ,business.industry ,Intermittent pneumatic compression ,General Medicine ,Cushing's disease ,Perioperative ,Disease ,medicine.disease ,Surgery ,Hypophysectomy, Chemical ,medicine ,Humans ,Female ,Pulmonary Embolism ,business ,Cushing Syndrome ,Glucocorticoid ,Hypophysectomy ,medicine.drug - Abstract
We have reported the case of a 30-year-old woman with Cushing's disease who died of massive pulmonary thromboembolism 5 weeks after successful transsphenoidal hypophysectomy. Glucocorticoid excess appears to cause a hypercoagulable state, and consideration of this thromboembolic propensity and its potential duration after cure is indicated in all patients with Cushing's syndrome during the perioperative period. At the present time, we recommend the routine perioperative use of intermittent pneumatic compression in all patients with Cushing's disease or Cushing's syndrome.
- Published
- 1990
29. Abundance of humpback whales in Oceania using photo-identification and microsatellite genotyping
- Author
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Constantine, R, primary, Jackson, JA, additional, Steel, D, additional, Baker, CS, additional, Brooks, L, additional, Burns, D, additional, Clapham, P, additional, Hauser, N, additional, Madon, B, additional, Mattila, D, additional, Oremus, M, additional, Poole, M, additional, Robbins, J, additional, Thompson, K, additional, and Garrigue, C, additional
- Published
- 2012
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30. PDB33 EVALUATION OF COST AND CLINICAL OUTCOMES BY HBA1C AT DIAGNOSIS USING VARIOUS DIABETES TREATMENT STRATEGIES
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Lee, LJ, primary, Klein, RW, additional, Klein, TM, additional, Furiak, N, additional, Peltz, G, additional, Bansal, M, additional, Jackson, JA, additional, and Juneja, R, additional
- Published
- 2010
- Full Text
- View/download PDF
31. Cultura escolar, fronteiras simbólicas: um estudo sobre a presença da comunidade paraguaia no cenário educacional sul-matogrossense
- Author
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Adriana Aparecida Pinto and Jackson James Debona
- Subjects
Latin America. Spanish America ,F1201-3799 ,Social sciences (General) ,H1-99 - Abstract
A pesquisa histórica em Educação revela faces dos processos de apropriação cultural significativos para compreensão tanto de aspectos sociais, bem como as distinções/preconceitos que por muitas vezes o cotidiano escolar teima em silenciar, a exemplo do que pontua Candau (2011). Nesse sentido, o presente trabalho objetiva colocar em evidência os resultados de pesquisa aplicada na comunidade escolar da periferia da cidade de Dourados, Mato Grosso do Sul, no que concerne a uma particularidade observada durante projetos de ensino e pesquisa desenvolvidos naquela instituição, a saber, o índice significativo de crianças que descendem em primeira ou segunda geração de famílias que imigraram do Paraguai para Dourados, entre as décadas de 1960 a 1980. Tal dado foi objetivado a partir de pesquisa qualitativa aplicada na Escola, com vistas à obtenção de um quadro geral da comunidade escolar para vislumbrar a aplicação de projetos em turmas de Ensino Fundamental Anos Finais. Os dados surpreenderam a todos os envolvidos, pois muito embora houvesse suspeitas a respeito, não havia mecanismos efetivos de comprovação da hipótese, para além da observação da compleição física e características gerais, identificadas nos sobrenomes das crianças matriculadas. Revelaram, ainda, que muitas dessas crianças não conhecem a história de sua origem, facultando à escola possibilidades variadas de trabalho pedagógico, tanto de ordem histórica, como em outras áreas do conhecimento escolar.
- Published
- 2019
- Full Text
- View/download PDF
32. Changes in body temperature and urinary cortisol after routine immunization in babies with intrauterine growth retardation
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Jackson, JA, primary, Wailoo, MP, additional, Petersen, SA, additional, Thompson, JR, additional, and Davies, T, additional
- Published
- 2007
- Full Text
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33. Localization of Insulinomas Using Selective Intraarterial Calcium Injection
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O'Shea, DB, primary, Vessey, Sjr, primary, Meeran, MK, primary, Jackson, JA, primary, Wallis, SC, primary, Lynn, JA, primary, and Bloom, SR, primary
- Published
- 1994
- Full Text
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34. Pharmacokinetics and pharmacodynamics of high-dose human regular U-500 insulin versus human regular U-100 insulin in healthy obese subjects.
- Author
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de la Peña A, Riddle M, Morrow LA, Jiang HH, Linnebjerg H, Scott A, Win KM, Hompesch M, Mace KF, Jacobson JG, Jackson JA, de la Peña, Amparo, Riddle, Matthew, Morrow, Linda A, Jiang, Honghua H, Linnebjerg, Helle, Scott, Adam, Win, Khin M, Hompesch, Marcus, and Mace, Kenneth F
- Abstract
Objective: Human regular U-500 (U-500R) insulin (500 units/mL) is increasingly being used clinically, yet its pharmacokinetics (PK) and pharmacodynamics (PD) have not been well studied. Therefore, we compared PK and PD of clinically relevant doses of U-500R with the same doses of human regular U-100 (U-100R) insulin (100 units/mL).Research Design and Methods: This was a single-site, randomized, double-blind, crossover euglycemic clamp study. Single subcutaneous injections of 50- and 100-unit doses of U-500R and U-100R were administered to 24 healthy obese subjects.Results: Both overall insulin exposure (area under the serum insulin concentration versus time curve from zero to return to baseline [AUC(0-)(t)(')]) and overall effect (total glucose infused during a clamp) were similar between formulations at both 50- and 100-unit doses (90% [CI] of ratios contained within [0.80, 1.25]). However, peak concentration and effect were significantly lower for U-500R at both doses (P < 0.05). Both formulations produced relatively long durations of action (18.3 to 21.5 h). Time-to-peak concentration and time to maximum effect were significantly longer for U-500R than U-100R at the 100-unit dose (P < 0.05). Time variables reflective of duration of action (late tR(max50), tR(last)) were prolonged for U-500R versus U-100R at both doses (P < 0.05).Conclusions: Overall exposure to and action of U-500R insulin after subcutaneous injection were no different from those of U-100R insulin. For U-500R, peaks of concentration and action profiles were blunted and the effect after the peak was prolonged. These findings may help guide therapy with U-500R insulin for highly insulin-resistant patients with diabetes. [ABSTRACT FROM AUTHOR]- Published
- 2011
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- View/download PDF
35. Safety and efficacy of glargine compared with NPH insulin for the treatment of Type 2 diabetes: a meta-analysis of randomized controlled trials.
- Author
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Bazzano LA, Lee LJ, Shi L, Reynolds K, Jackson JA, and Fonseca V
- Published
- 2008
- Full Text
- View/download PDF
36. An investigation of obese adults' views of the outcomes of dietary treatment.
- Author
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Jones N, Furlanetto DL, Jackson JA, and Kinn S
- Abstract
BACKGROUND: Although recommendations about the treatment of obesity have been well documented, there is little research into how obese individuals view the outcomes of dietary treatment. It has been suggested that patient involvement in evaluating treatment outcomes may help target issues to assist with the ongoing improvement of dietetic services. The aim of this qualitative study was to collect patients' views on the dietetic service, the treatment outcomes in terms of lifestyle change and the impact that attending the dietetic service had on their lives in order to improve dietetic treatment, and to assist in the selection of appropriate outcome measurements in the future. METHODS: Semi-structured interviews were conducted with 24 obese patients attending dietetic clinics in Ayrshire, West of Scotland for weight management (advice on healthy eating and physical activity to achieve an energy deficit). Patients' views were transcribed, grouped and coded using content analysis. RESULTS: Views included the importance of attending the dietitian for support to achieve weight management and a need to 'feel accountable to someone'. Interviewees valued information provided regarding diet, physical activity, behavioural strategies and the risks of obesity. Patients described the impact of obesity on their lives and identified changes to their lifestyles and health since attending the dietitian. They also identified barriers to change, e.g. feeling frustrated and overwhelmed about the changes necessary. CONCLUSION: This study extends the current knowledge of patients' views of their treatment outcomes, which may be important in helping dietitians devise appropriate patient-centred outcome measures. However, as this is a small sample, further long term research into a wider range of current and discharged patients' views is required. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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37. Patient-centred outcomes in dietary research.
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Jackson JA, Kinn S, and Dalgarno P
- Abstract
INTRODUCTION: Current health policy stresses the need to take patients' views into account in the provision of health care, including involvement in the process of care and determining the outcome(s) of treatment. It is unclear whether patients undergoing dietary treatment have been consulted on their views. METHODS: A literature review, searching electronic databases and hand searching dietetic journals, of dietary intervention research was carried out to identify if patients' views were sought in determining outcomes. RESULTS: Searching uncovered a total of 28 papers reporting the results of studies of dietary interventions where patients views were sought in the measurement of outcome, however little detail was given about patient(s) involvement and whether the use of the measures influenced future care. FUTURE WORK: Should address the issue of patient involvement in the determination of outcome and how this then influences future care. [ABSTRACT FROM AUTHOR]
- Published
- 2005
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- View/download PDF
38. Orthomolecular oncology review: ascorbic acid and cancer 25 years later.
- Author
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González MJ, Miranda-Massari JR, Mora EM, Guzmán A, Riordan NH, Riordan HD, Casciari JJ, Jackson JA, and Román-Franco A
- Abstract
The effect of ascorbic acid on cancer has been a subject of great controversy. This is a follow-up review of the 1979 article by Cameron, Pauling, and Leibovitz published in Cancer Research. In this updated version, the authors address general aspects of ascorbic acid and cancer that have been presented before, while reviewing, analyzing, and updating new existing literature on the subject. In addition, they present and discuss their own mechanistic hypothesis on the effect of ascorbic acid on the cancer cell. The objective of this review is to provide an updated scientific basis for the use of ascorbic acid, especially intravenously as adjuvant treatment in pharmacological nutritional oncology. [ABSTRACT FROM AUTHOR]
- Published
- 2005
- Full Text
- View/download PDF
39. Changes in body temperature and urinary cortisol after routine immunization in babies with intrauterine growth retardation.
- Author
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Jackson, JA, Wailoo, MP, Petersen, SA, Thompson, JR, Davies, T, Jackson, J A, Wailoo, M P, Petersen, S A, and Thompson, J R
- Subjects
- *
FETAL growth retardation , *IMMUNIZATION of infants , *HYDROCORTISONE , *CREATININE - Abstract
Aim: To investigate whether infants with intrauterine growth retardation (IUGR) experience different changes in temperature and cortisol excretion after routine immunization compared with normal healthy infants.Methods: Overnight deep body temperature and urinary cortisol to creatinine ratios were measured on the night after immunization and a control night in normal and IUGR infants.Results: In 60 normal infants, first vaccination at about 10 wk of age led to a significant increase in minumum overnight temperature compared to the control night, mean rise 0.25 degrees C (95% CI, 0.12 to 0.38). In 35 IUGR infants the mean rise in temperature between immunization night and control night was 0.35 degrees C (95% CI, 0.15 to 0.55). The increases in minimum temperature did not differ significantly between the normal and IUGR infants (p = 0.11). Cortisol to creatinine ratios measured from overnight urine samples showed that 23 IUGR infants had consistently higher levels than 39 normal infants: control night medians 34 and 15 (p=0.01) and immunization night medians 56 and 26 (p = 0.02), respectively. However, the percentage increase did not differ significantly between the IUGR infants and the normal infants. A smaller number of second immunizations were studied, but no significant differences were found.Conclusion: These results suggest that although the impact of immunization is the same for IUGR and normal infants, because IUGR infants are less mature and at greater stress before immunization, the absolute levels that they experience after immunization are higher than those for normal infants. [ABSTRACT FROM AUTHOR]- Published
- 2001
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- View/download PDF
40. Ensino de História regional em Mato Grosso do Sul: limites e possibilidades no uso do livro didático para o ensino fundamental
- Author
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Jackson James Debona
- Subjects
Livro didático. Ensino de História. História Regional. Mato Grosso do Sul. Mato Grosso. ,Latin America. Spanish America ,F1201-3799 ,Social sciences (General) ,H1-99 - Abstract
Este artigo é parte do trabalho realizado na análise de livros didáticos que entraram no Mato Grosso do Sul no período do PNLD 2011, para o ensino de História, no esforço de compreender questões relacionadas à inserção dos aspectos regionais no âmbito dos conteúdos a serem ministrados no Ensino Fundamental. A metodologia utilizada no mapeamento, seleção e localização das coleções, consiste no exame material das fontes selecionadas, a exemplo do que propõem os estudos de (CHARTIER,1990) e (MOREIRA, 2011) entendendo que a produção dos textos está diretamente vinculada aos suportes os quais são dados a ler. Tais ações vêm sendo orientadas pelo Ministério da Educação, através de programas de roteirização e produção de guias para orientar essa escolha - PNLD - aliada às práticas cotidianas as quais, tratando de escola pública, fortalecem, para os professores, a sua utilização e para os pesquisadores a necessidade de discutir suas formas de apropriação.
- Published
- 2016
41. Body temperature changes before minor illness in infants.
- Author
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Jackson JA, Petersen SA, and Wailoo MP
- Published
- 1994
- Full Text
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42. The relationship between posthypnotic suggestion and endurance in physically trained subjects
- Author
-
Gass Gc, Camp Em, and Jackson Ja
- Subjects
Adult ,Male ,Complementary and Manual Therapy ,Motivation ,Hypnosis ,medicine.medical_specialty ,Maximum ventilation ,Respiration ,Carbon Dioxide ,Audiology ,Developmental psychology ,Clinical Psychology ,Oxygen Consumption ,Heart Rate ,Lactates ,Physical Endurance ,Blood lactate ,medicine ,Humans ,Treadmill ,Suggestion ,Psychology ,Trained subjects - Abstract
55 male Ss were assigned to 5 groups: control, hypnosis alone, motivation alone, low susceptible hypnosis with motivation, or high susceptible hypnosis with motivation. Ss performed 2 runs on a treadmill to their maximum capacity, as measured by oxygen consumption, blood lactate concentration, and respiratory quotient. Groups involving hypnosis performed in the posthypnotic state. A significant increase in endurance performance was revealed in the motivation alone Ss and in high susceptible hypnosis Ss who were given motivational suggestions. Maximum ventilation was significantly increased in high susceptible hypnosis Ss when compared with control Ss and significant increases in blood lactate concentrations were revealed when the high susceptible hypnosis Ss were compared with low susceptible hypnosis and motivation alone Ss. The reasons for the changes in metabolic variables are discussed. Findings demonstrated that in achieving greater endurance performance, motivational suggestions alone are a...
- Published
- 1979
43. Intraocular Injection of ES Cell-Derived Neural Progenitors Improve Visual Function in Retinal Ganglion Cell-Depleted Mouse Models
- Author
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Mundackal S. Divya, Vazhanthodi A. Rasheed, Tiffany Schmidt, Soundararajan Lalitha, Samer Hattar, and Jackson James
- Subjects
embryonic stem cell derived neural progenitors ,retinal ganglion cells ,glaucoma ,transplantation ,functional integration ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Retinal ganglion cell (RGC) transplantation is a promising strategy to restore visual function resulting from irreversible RGC degeneration occurring in glaucoma or inherited optic neuropathies. We previously demonstrated FGF2 induced differentiation of mouse embryonic stem cells (ESC) to RGC lineage, capable of retinal ganglion cell layer (GCL) integration upon transplantation. Here, we evaluated possible improvement of visual function by transplantation of ES cell derived neural progenitors in RGC depleted glaucoma mice models. ESC derived neural progenitors (ES-NP) were transplanted into N-Methyl-D-Aspartate (NMDA) injected, RGC-ablated mouse models and a pre-clinical glaucoma mouse model (DBA/2J) having sustained higher intra ocular pressure (IOP). Visual acuity and functional integration was evaluated by behavioral experiments and immunohistochemistry, respectively. GFP-expressing ES-NPs transplanted in NMDA-injected RGC-depleted mice differentiated into RGC lineage and possibly integrating into GCL. An improvement in visual acuity was observed after 2 months of transplantation, when compared to the pre-transplantation values. Expression of c-Fos in the transplanted cells, upon light induction, further suggests functional integration into the host retinal circuitry. However, the transplanted cells did not send axonal projections into optic nerve. Transplantation experiments in DBA/2J mouse showed no significant improvement in visual functions, possibly due to both host and transplanted retinal cell death which could be due to an inherent high IOP. We showed that, ES NPs transplanted into the retina of RGC-ablated mouse models could survive, differentiate to RGC lineage, and possibly integrate into GCL to improve visual function. However, for the survival of transplanted cells in glaucoma, strategies to control the IOP are warranted.
- Published
- 2017
- Full Text
- View/download PDF
44. Intermittent Dieting: Theoretical Considerations for the Athlete
- Author
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Jackson James Peos, Layne Eiseman Norton, Eric Russell Helms, Andrew Jacob Galpin, and Paul Fournier
- Subjects
intermittent energy restriction ,diet—reducing ,weight loss ,caloric restriction ,adaptive thermogenesis ,composition—body ,body weight maintenance ,Sports ,GV557-1198.995 - Abstract
Athletes utilise numerous strategies to reduce body weight or body fat prior to competition. The traditional approach requires continuous energy restriction (CER) for the entire weight loss phase (typically days to weeks). However, there is some suggestion that intermittent energy restriction (IER), which involves alternating periods of energy restriction with periods of greater energy intake (referred to as ‘refeeds’ or ‘diet breaks’) may result in superior weight loss outcomes than CER. This may be due to refeed periods causing transitory restoration of energy balance. Some studies indicate that intermittent periods of energy balance during energy restriction attenuate some of the adaptive responses that resist the continuation of weight and fat loss. While IER—like CER—is known to effectively reduce body fat in non-athletes, evidence for effectiveness of IER in athletic populations is lacking. This review provides theoretical considerations for successful body composition adjustment using IER, with discussion of how the limited existing evidence can be cautiously applied in athlete practice.
- Published
- 2019
- Full Text
- View/download PDF
45. Symptomatic osteoporosis in a man with hyperprolactinemic hypogonadism
- Author
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Jackson Ja, Parfitt Am, and Michael Kleerekoper
- Subjects
Male ,medicine.medical_specialty ,Bone disease ,Osteoporosis ,Internal medicine ,Internal Medicine ,medicine ,Back pain ,Deformity ,Humans ,Radionuclide Imaging ,Aged ,business.industry ,Hypogonadism ,Metabolic disorder ,General Medicine ,medicine.disease ,Height loss ,Spine ,Osteopenia ,Hyperprolactinemia ,Radiography ,Endocrinology ,Photon absorptiometry ,Radiology ,medicine.symptom ,business - Abstract
A 66-year-old man presented with height loss, back pain due to an L4 vertebral compression deformity, and marked osteopenia shown by radial photon absorptiometry. The patient had small testes and a long history of infertility and impotence. Plasma testosterone was low (130 ng/dL; normal, 300 to 1000 ng/dL) with marked elevation of serum prolactin (590 ng/mL; normal, 0 to 15 ng/mL). High-resolution computed tomography showed an invasive pituitary macroadenoma with a secondary empty sella turcica. Bone histomorphometry showed low-normal trabecular bone volume with normal formation and resorption indices. The patient was treated with calcium carbonate supplements, testosterone replacement, and bromocriptine mesylate without subsequent progression of the osteoporosis. This first report of hyperprolactinemic hypogonadism in a man who presented with overt osteoporosis shows the importance of evaluating gonadal function in all osteoporotic men.
- Published
- 1986
46. PERANCANGAN E-SCM PADA PT SUPERPOLY INDUSTRY
- Author
-
Rudy Rudy, Jackson Jackson, Christina Desi, and Ishak Eko Hadi T
- Subjects
Telecommunication ,TK5101-6720 ,Information technology ,T58.5-58.64 - Abstract
Manufacturing companies always strives to improve performance, namely in production of goods in time, management of material supply to prevent out of stock by exchanging information with suppliers, and on time delivery of goods to distributors to meet customer satisfaction on manufactured products. The purpose of this study is to analyse the supply chain management and to design the electronic supply chain management (e-SCM) on Superpoly Industry Company so it able to give accurate and reliable information also support the better supply chain acitivity for the company. The used research methods are preliminary steps (energize the organization, enterprise vision, supply chain value assessment, opportunity identification, and strategy decision) for the analysis and for the design consist of supply chain management strategic, customer and service management, manufacturing and supply chain planning, supplier relationship management, logistics resource management, and architecting. The conclusion is the e-SCM application will make it easier for the distributor to order merchandise from the company because information channel is open, which is website and information flow between supplier, company, and distribution is getting better. Keywords: supply chain management, electronic supply chain management, company
- Published
- 2009
- Full Text
- View/download PDF
47. Spectral reflectance of whale skin above the sea surface: a proposed measurement protocol
- Author
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Cubaynes, HC, Rees, WG, Jackson, JA, Moore, M, Sformo, TL, McLellan, WA, Niemeyer, ME, George, JC, Van Der Hoop, J, Forcada, J, Trathan, P, and Fretwell, PT
- Subjects
reflectance ,spectroradiometer ,14. Life underwater ,Population monitoring ,whales ,VHRsatellite - Abstract
Great whales have been detected using very-high-resolution satellite imagery, suggesting this technology could be used to monitor whales in remote areas. However, the application of this method to whale studies is at an early developmental stage and several technical factors need to be addressed, including capacity for species differentiation and the maximum depth of detection in the water column. Both require knowledge of the spectral reflectance of the various whale species just above the sea surface, as when whales bodies break the surface of the water to breath, log or breach, there is, theoretically, no sea water between the whale’s skin and the satellite sensor. Here we tested whether such reflectance could be measured on dead whale tissue. We measured the spectral reflectance of fresh integument collected during the bowhead subsistence harvest, and of thawed integument samples from various species obtained following strandings and stored at -20°C. We show that fresh and thawed samples of whale integument have different spectral properties. The reflectance of fresh samples was higher than the reflectance of thawed samples, as integument appears to darken after death and with time, even under frozen conditions. In this study, we present the first whale reflectance estimates (without the influence of sea water and for dead tissue). These provide a baseline for additional work, needed to advance the use of satellite imagery to monitor whales and facilitate their conservation.
48. Whales from space: Four mysticete species described using new VHR satellite imagery
- Author
-
Cubaynes, HC, Fretwell, PT, Bamford, C, Gerrish, L, and Jackson, JA
- Subjects
VHR satellite imagery ,remote sensing ,Eschrichtius robustus ,Megaptera novaeangliae ,baleen whale ,Balaenoptera physalus ,Eubalaena australis ,14. Life underwater ,mysticete - Abstract
© 2018 The Authors. Marine Mammal Science published by Wiley Periodicals, Inc. on behalf of Society for Marine Mammalogy. Large-bodied animals such as baleen whales can now be detected with very high resolution (VHR) satellite imagery, allowing for scientific studies of whales in remote and inaccessible areas where traditional survey methods are limited or impractical. Here we present the first study of baleen whales using the WorldView-3 satellite, which has a maximum spatial resolution of 31 cm in the panchromatic band, the highest currently available to nonmilitary professionals. We manually detected, described, and counted four different mysticete species: fin whales (Balaenoptera physalus) in the Ligurian Sea, humpback whales (Megaptera novaeangliae) off Hawaii, southern right whales (Eubalaena australis) off Península Valdés, and gray whales (Eschrichtius robustus) in Laguna San Ignacio. Visual and spectral analyses were conducted for each species, their surrounding waters, and nonwhale objects (e.g., boats). We found that behavioral and morphological differences made some species more distinguishable than others. Fin and gray whales were the easiest to discern due to their contrasting body coloration with surrounding water, and their prone body position, which is proximal to the sea surface (i.e., body parallel to the sea surface). These results demonstrate the feasibility of using VHR satellite technology for monitoring the great whales.
49. Global biogeographic patterns in bipolar moss species
- Author
-
Biersma, EM, Jackson, JA, Hyvönen, J, Koskinen, S, Linse, K, Griffiths, H, and Convey, P
- Subjects
bryophyte ,Polytrichaceae ,15. Life on land ,Polytrichastrum ,bipolar disjunction - Abstract
A bipolar disjunction is an extreme, yet common, biogeographic pattern in non-vascular plants, yet its underlying mechanisms (vicariance or long-distance dispersal), origin and timing remain poorly understood. Here, combining a large-scale population dataset and multiple dating analyses, we examine the biogeography of four bipolar Polytrichales mosses, common to the Holarctic (temperate and polar Northern Hemisphere regions) and the Antarctic region (Antarctic, sub-Antarctic, southern South America) and other Southern Hemisphere (SH) regions. Our data reveal contrasting patterns, for three species were of Holarctic origin, with subsequent dispersal to the SH, while one, currently a particularly common species in the Holarctic (Polytrichum juniperinum), diversified in the Antarctic region and from here colonized both the Holarctic and other SH regions. Our findings suggest long-distance dispersal as the driver of bipolar disjunctions. We find such inter-hemispheric dispersals are rare, occurring on multi-million-year timescales. High-altitude tropical populations did not act as trans-equatorial 'stepping-stones', but rather were derived from later dispersal events. All arrivals to the Antarctic region occurred well before the Last Glacial Maximum and previous glaciations, suggesting that, despite the harsh climate during these past glacial maxima, plants have had a much longer presence in this southern region than previously thought.
50. Molecular data suggest long-term in Situ Antarctic persistence within Antarctica's most speciose plant genus, Schistidium
- Author
-
Biersma, EM, Jackson, JA, Stech, M, Griffiths, H, Linse, K, and Convey, P
- Subjects
bryophyte ,13. Climate action ,polar ,Antarctic ,15. Life on land ,survival ,biogeography ,moss ,bipolar ,biodiversity - Abstract
© 2018 Biersma, Jackson, Stech, Griffiths, Linse and Convey. From glacial reconstructions it is clear that Antarctic terrestrial life must have been extremely limited throughout Quaternary glacial periods. In contrast, recent biological studies provide clear evidence for long-term in situ persistence throughout glacial times within most extant Antarctic faunal and several microbial groups. However, even now, the evolutionary history of the Antarctic flora-despite playing major role in Antarctic ecosystems-remains poorly studied. We assessed the diversity, richness and relative age divergences within Schistidium (Grimmiaceae, Bryophyta), the most species-rich plant genus in the Antarctic, as well as the plant genus containing most Antarctic endemic species. We applied phylogenetic and molecular dating methods based on nuclear ribosomal Internal Transcribed Spacer sequences, including all known Antarctic Schistidium species with available sample material. We additionally investigated the continent-wide genetic diversity within the most common Antarctic representative of the genus-the endemic species Schistidium antarctici-and performed preliminary phylogeographic analyses of the bipolar species Schistidium rivulare. Most previously described Antarctic Schistidium species were genetically distinct, confirming their specific status. Interspecific divergences of all species took place at least ~1 Mya, suggesting a likely in situ persistence in Antarctica for (at least) all endemic Schistidium species. The widespread endemic species, Schistidium antarctici, diverged from other Antarctic congeners in the late Miocene, thereby revealing the oldest extant plant species currently known in Antarctica, and providing increasing support for the hypothesis of vegetation survival through multiple glacial periods. Within S. antarctici we identified several distinct clades dividing the eastern Antarctic Peninsula and Scotia Arc islands from the western Antarctic Peninsula and all continental locations. This suggests that the mountainous spine on the Antarctic Peninsula forms a strong barrier to gene flow in this species, while increased genetic diversity in the northern Maritime Antarctic indicates likely glacial refugia in this area. This study provides an important first step toward assessing the diversity and evolutionary history of the most speciose moss genus in the Antarctic. The multi-million year presence of several endemic species contributes to studies on their adaptive potential to survive climate change over both historical and contemporary timescales.
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