10,138 results on '"Graham, F."'
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2. Commercial harvest and population characteristics of freshwater drum and buffalo Ictiobus spp. in Ohio waters of Lake Erie
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Montague, Graham F., Zentner, Douglas L., Snow, Richard A., Bartnicki, Jory B., Shoup, Daniel E., and Schmidt, Brian A.
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- 2024
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3. Professional Learning in Student Affairs Graduate Preparation
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Graham F. Hunter
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This study explores how students' professional learning is distributed across and mediated by multiple learning environments during student affairs graduate preparation. Utilizing activity system analysis and qualitative case study, the study reports on the experiences of four second-year Master's students at a Midwest preparation program. Findings demonstrate how fieldwork experiences shape what graduate students deem as essential or useful knowledge for their practice and, consequently, the value they place on coursework experiences. Participants often rejected formal knowledge when it did not offer clear and immediate solutions to their daily problems. This study raises implications for individuals working with graduate students regarding their professional development, especially faculty members and fieldwork supervisors.
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- 2023
4. HESA Faculty Members as Academic Planners: Perspectives on Course Planning
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Graham F. Hunter
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Utilizing interviews with 44 full-time HESA faculty members, this study explores how they describe planning for individual courses. Findings suggest a model of course planning in which faculty members enter the process with particular beliefs and then make decisions as they consider existing syllabi, course objectives, course content, and student characteristics. Context further shapes the planning process. This study has implications for faculty members' academic planning and further research on teaching in HESA programs.
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- 2024
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5. Surveillance to track progress towards poliomyelitis eradication--worldwide, 2022-2023/Surveillance de la poliomyelite: suivi des progres accomplis vers l'eradication de la maladie a l'echelle mondiale, 2022-2023
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Kishore, Nishant, Krow-Lucal, Elizabeth, Diop, Ousmane M., Jorba, Jaume, Avagnan, Tigran, Grabovac, Varja, Kfutwah, Anfumbom K.W., Johnson, Ticha, Joshi, Sudhir, Sangal, Lucky, Sharif, Salmaan, Wahdan, Ashraf, Tallis, Graham F., and Kovacs, Stephanie D.
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United States. Centers for Disease Control and Prevention -- International economic relations ,Poliomyelitis -- Health aspects ,Government ,Health - Abstract
The reliable and timely detection of poliovirus infection through surveillance for acute flaccid paralysis (AFP), supplemented by environmental surveillance (ES) of sewage samples, is a critical component of the polio eradication programme. Since 1988, the number of polio cases caused by wild poliovirus (WPV) has decreased by >99.9%, and eradication of WPV serotypes 2 and 3 has been certified; only serotype 1 (WPV1) continues to circulate and transmission remains endemic in Afghanistan and Pakistan. In this surveillance update, we evaluated indicators of AFP in surveillance, ES for polioviruses and data on the performance of the Global Polio Laboratory Network (GPLN) provided by 28 priority countries for the programme during 2022-2023. No WPV1 cases have been detected outside those countries since August 2022, when importation into Malawi and Mozambique resulted in an outbreak during 2021-2022. During 2022-2023, 20 of 28 priority countries (71.4%) met national AFP surveillance indicator targets, and the number of ES sites increased. Low national rates of reported AFP cases in priority countries in 2023 might have been due to lags in surveillance reporting; substantial national and subnational AFP surveillance gaps persist. Maintaining high-quality surveillance is critical to achieving the goal of global polio eradication. Monitoring surveillance indicators is important to identifying gaps and guiding surveillance-strengthening activities, particularly in countries at high risk for poliovirus circulation. La detection fiable et rapide de l'infection a poliovirus au moyen de la surveillance de la paralysie flasque aigue (PFA), completee par une surveillance des echantillons d'eaux usees, est un element essentiel du programme d'eradication de la poliomyelite. Depuis 1988, le nombre de cas de poliomyelite dus au poliovirus sauvage (PVS) a diminue de >99,9% et l'eradication des serotypes 2 et 3 du PVS a ete certifiee; seul le serotype 1 du poliovirus sauvage (PVS1) continue de circuler et la transmission demeure endemique en Afghanistan et au Pakistan. Dans ce rapport faisant le point sur la surveillance, nous evaluons les indicateurs de la PFA a des fins de surveillance pour la recherche des poliovirus et les donnees relatives aux performances du Reseau mondial de laboratoires pour la poliomyelite (RMLP) communiquees par les 28 pays prioritaires pour le programme en 2022-2023. Aucun cas du au PVS1 n'a ete detecte en dehors de ces pays depuis aout 2022, apres une flambee epidemique en 2021-2022 due a l'importation du virus au Malawi et au Mozambique. En 2022-2023, 20 des 28 pays prioritaires (71,4 %) ont atteint les cibles des indicateurs de surveillance de la PFA, et le nombre de sites de surveillance environnementale a augmente. Le faible nombre de cas de PFA signales dans les pays prioritaires en 2023 pourrait etre du a des retards dans la communication des donnees issues de la surveillance; d'importantes lacunes en matiere de surveillance de la PFA a l'echelle nationale et infranationale persistent. Il est essentiel de maintenir une surveillance de qualite afin d'atteindre l'eradication de la poliomyelite a l'echelle mondiale. Un suivi des indicateurs de surveillance est egalement important pour identifier les lacunes et orienter les activites de surveillance, particulierement dans les pays oU il existe un risque eleve de circulation du poliovirus., Introduction Since the Global Polio Eradication Initiative (GPEI) was established in 1988, the number of WPV cases has decreased by >99.9%, and WPV serotypes 2 and 3 have been declared [...]
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- 2024
6. Conceptualizing Student Affairs Graduate Preparation as Activity System(s)
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Hunter, Graham F.
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Graduate preparation programs serve as a primary site for training new student affairs practitioners. However, scholars perennially raise concerns about the effectiveness of such graduate training and the readiness of new student affairs practitioners. Alternative theoretical frameworks oriented toward student learning can offer new insight into training for the profession. Utilizing literature on student affairs graduate preparation and cultural-historical activity theory (CHAT), this article offers a conceptual model of student affairs graduate preparation as sociocultural activity systems. This model maps dimensions of the coursework and fieldwork environments that graduate students navigate during their training and highlights the sociocultural contradictions that emerge within and between each of these environments. Finally, the article provides a discussion of how the conceptual model can guide future research on graduate training and strengthen student learning and development within training programs.
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- 2022
7. Closing PFAS analytical gaps: Inter-method evaluation of total organofluorine techniques for AFFF-impacted water
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Fuhar Dixit, Edmund H. Antell, Katharine A. Faber, Chuhui Zhang, Manmeet W. Pannu, Megan H. Plumlee, Jean Van Buren, Abraham Doroshow, William C.K. Pomerantz, William A. Arnold, Christopher P. Higgins, Graham F. Peaslee, Lisa Alvarez-Cohen, David L. Sedlak, and Mohamed Ateia
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PFASs ,Analytical methods ,LC/MS-MS ,TOP assay ,GC-MS/MS ,Suspect screening ,Hazardous substances and their disposal ,TD1020-1066 - Abstract
Multiple poly- and perfluoroalkyl substances (PFASs) are present in aqueous film-forming foams (AFFF) used for firefighting activities. Currently, no single analytical technique provides a complete accounting of total PFASs or total organofluorine content in AFFF-contaminated samples. To provide insight into the performance of existing methods, we compared ten previously described PFAS measurement techniques. In AFFF-amended tap water, US EPA Methods 533 and 1633, adsorbable organic fluorine with particle induced gamma emission spectroscopy (AOF-PIGE) and fluorine-19 nuclear magnetic resonance (19F NMR) provided similar estimates of total fluorine. The total oxidizable precursor (TOP) assay, suspect screening, and adsorbable organic fluorine with combustion ion chromatography (AOF-CIC) yielded estimates of total organic fluorine that were about two to three times higher than the other techniques. Proximate to AFFF sources, suspect screening and modified EPA Method 1633 yielded higher results, while the TOP assay results were between the other two sets of analyses. Further from sources, suspect screening, modified EPA Method 1633, and the TOP assay yielded similar results that were 4-fold higher than results from targeted quantification methods, such as EPA Method 1633. These results are consistent with expectations about PFAS behavior and inform the selection of analytical techniques used for PFAS contamination characterization efforts.
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- 2024
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8. Exploring the lived experience of performance-related health and wellbeing among flautists
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Jiayi Wang and Graham F. Welch
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performance-related health ,flautists ,lived experience ,COVID-19 pandemic ,river of experience ,Psychology ,BF1-990 - Abstract
IntroductionThe study has investigated the lived experience of flautists, focusing on their experiences and perceptions of performance-related physical discomfort, injury and related mental health challenges that they might have encountered in practice and performance. The aims of the research have been to provide flautists with an opportunity to reflect on any physical or psychological performance issues in their own words, and to understand the subjective meaning of these experiences.MethodsA basic qualitative approach was used for gathering data. All the fieldwork was undertaken during or immediately after the Covid-19 pandemic. Consequently, the participating flautists were deliberately selected using professional networks on the basis of their answers to a pre-interview initial questionnaire related to the characteristics of their personal backgrounds and their experiences, as well as being able to participate remotely. There have been two data collection phases. Phase 1 was a specially designed pre-interview questionnaire drawing on themes from appropriate literature. Phase 2 built on the pre-interview questionnaire responses and was designed as semi-structured interviews, undertaken on Zoom, and included a ‘River of Flute-playing Experience’ activity during the interview. The ‘River of Experience’ method is an autobiographical research tool in which participants were asked to annotate key biographical experiences and challenges at various points along their drawing of a meandering river. The combined data analyses drew on thematic analysis.ResultsThe eight participants reported a personal history of performance-related health and wellbeing challenges that they had faced at some point in their lives. The findings reveal that flautists encounter health-related challenges associated with their practice and performances, and the data suggest that they each require an understanding of likely performance-related health challenges and supportive resources to assist them in managing these challenges.DiscussionThe participants’ diverse experiences highlight the importance of managing health and the value of supportive social connections. They cope with health challenges by integrating passion, resilience, and adaptability into their lives, finding ways to grow and continue to thrive in their flute-playing journey. The study underscores the need for comprehensive health education and support resources for flautists, emphasising the significance of resilience and adaptability in fostering health, wellbeing, and success.
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- 2024
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9. Phage therapy: From biological mechanisms to future directions
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Strathdee, Steffanie A, Hatfull, Graham F, Mutalik, Vivek K, and Schooley, Robert T
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Medical Microbiology ,Biomedical and Clinical Sciences ,Infectious Diseases ,Infection ,Phage Therapy ,Bacteriophages ,Bacteria ,bacteriophage ,bacteriophage therapy ,phage ,phage therapy ,Biological Sciences ,Medical and Health Sciences ,Developmental Biology ,Biological sciences ,Biomedical and clinical sciences - Abstract
Increasing antimicrobial resistance rates have revitalized bacteriophage (phage) research, the natural predators of bacteria discovered over 100 years ago. In order to use phages therapeutically, they should (1) preferably be lytic, (2) kill the bacterial host efficiently, and (3) be fully characterized to exclude side effects. Developing therapeutic phages takes a coordinated effort of multiple stakeholders. Herein, we review the state of the art in phage therapy, covering biological mechanisms, clinical applications, remaining challenges, and future directions involving naturally occurring and genetically modified or synthetic phages.
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- 2023
10. An inclusive Research and Education Community (iREC) model to facilitate undergraduate science education reform
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Denise L. Monti, Julia C. Gill, Tamarah L. Adair, Sandra D. Adams, Yesmi Patricia Ahumada-Santos, Isabel Amaya, Kirk Anders, Justin R. Anderson, Mauricio S. Antunes, Mary Ayuk, Frederick Baliraine, Tonya C. Bates, Andrea R. Beyer, Suparna Bhalla, Tejas Bouklas, Sharon K. Bullock, Kristen A. Butela, Christine Byrum, Steven M. Caruso, Rebecca Chong, Hui-Min Chung, Stephanie B. Conant, Brett Condon, Katie E. Crump, Tom D'Elia, Megan K. Dennis, Linda C. DeVeaux, Lautaro Diacovich, Arturo Diaz, Iain Duffy, Dustin Edwards, Patricia C. Fallest-Strobl, Ann Findley, Matthew R. Fisher, Marie P. Fogarty, Victoria Jane Frost, Maria D. Gainey, Courtney S. Galle, Bryan Gibb, Urszula Golebiewska, Hugo Gramajo, Anna S. Grinath, Jennifer Guerrero, Nancy Guild, Kathryn E. Gunn, Susan Gurney, Lee E. Hughes, Pradeepa Jayachandran, Kristen Johnson, Allison Johnson, Alison E. Kanak, Michelle L. Kanther, Rodney A. King, Kathryn Kohl, Julia Lee-Soety, Lynn O. Lewis, Heather Lindberg, Jaclyn A. Madden, Breonna J. Martin, Matthew D. Mastropaolo, Sean McClory, Evan C. Merkhofer, Julie A. Merkle, Jon Mitchell, María Alejandra Mussi, Fernando Nieto, Jillian Nissen, Imade Yolanda Nsa, Mary G. O'Donnell, R. Deborah Overath, Shallee T. Page, Andrea Panagakis, Jesús Ricardo Parra Unda, Michelle B. Pass, Tiara Perez Morales, Nick T. Peters, Ruth Plymale, Richard Pollenz, Nathan S. Reyna, Claire A. Rinehart, Jessica Rocheleau, John S. Rombold, Ombeline Rossier, Adam D. Rudner, Elizabeth E. Rueschhoff, Christopher D. Shaffer, Mary Ann V. Smith, Amy B. Sprenkle, C. Nicole Sunnen, Michael A. Thomas, Michelle M. Tigges, Deborah Tobiason, Sara Sybesma Tolsma, Julie Torruellas Garcia, Peter Uetz, Edwin Vazquez, Catherine M. Ward, Vassie C. Ware, Jacqueline M. Washington, Matthew J. Waterman, Daniel E. Westholm, Keith A. Wheaton, Simon J. White, Elizabeth C. Williams, Daniel C. Williams, Ellen M. Wisner, William H. Biederman, Steven G. Cresawn, Danielle M. Heller, Deborah Jacobs-Sera, Daniel A. Russell, Graham F. Hatfull, David J. Asai, David I. Hanauer, Mark J. Graham, and Viknesh Sivanathan
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Science Education Alliance ,inclusive Research and Education Community ,pathway modeling ,course-based research experience ,STEM faculty development ,Education (General) ,L7-991 - Abstract
Over the last two decades, there have been numerous initiatives to improve undergraduate student outcomes in STEM. One model for scalable reform is the inclusive Research Education Community (iREC). In an iREC, STEM faculty from colleges and universities across the nation are supported to adopt and sustainably implement course-based research – a form of science pedagogy that enhances student learning and persistence in science. In this study, we used pathway modeling to develop a qualitative description that explicates the HHMI Science Education Alliance (SEA) iREC as a model for facilitating the successful adoption and continued advancement of new curricular content and pedagogy. In particular, outcomes that faculty realize through their participation in the SEA iREC were identified, organized by time, and functionally linked. The resulting pathway model was then revised and refined based on several rounds of feedback from over 100 faculty members in the SEA iREC who participated in the study. Our results show that in an iREC, STEM faculty organized as a long-standing community of practice leverage one another, outside expertise, and data to adopt, implement, and iteratively advance their pedagogy. The opportunity to collaborate in this manner and, additionally, to be recognized for pedagogical contributions sustainably engages STEM faculty in the advancement of their pedagogy. Here, we present a detailed pathway model of SEA that, together with underpinning features of an iREC identified in this study, offers a framework to facilitate transformations in undergraduate science education.
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- 2024
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11. Modelling hepatitis C infection acquired from blood transfusions in the UK between 1970 and 1991 for the Infected Blood Inquiry
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Sarah Hayes, Ruth McCabe, Daniela De Angelis, Christl A. Donnelly, Stephen J. W. Evans, Graham F. Medley, David J. Spiegelhalter, and Sheila M. Bird
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hepatitis C ,blood transfusion ,modelling ,infected blood ,Science - Abstract
The Statistics Expert Group was convened at the request of the Infected Blood Inquiry to provide estimates of the number of infections and deaths from blood-borne infections including hepatitis B virus, human immunodeficiency virus, hepatitis C virus (HCV) and variant Creutzfeldt Jakob disease, as a direct result of contaminated blood and blood products administered in the United Kingdom of Great Britain and Northern Ireland (UK). In the absence of databases of HCV infections and related deaths for all nations of the UK, a statistical model was required to estimate the number of infections and subsequent deaths from HCV acquired from blood transfusions from January 1970 to August 1991. We present this statistical model in detail alongside the results of its application to each of the four nations in the UK. We estimated that 26 800 people (95% uncertainty interval 21 300–38 800) throughout the UK were chronically infected with HCV because of contaminated blood transfusions between January 1970 and August 1991. The number of deaths up to the end of 2019 that occurred as a result of this chronic infection is estimated to be 1820 (95% uncertainty interval 650–3320).
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- 2024
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12. Closing PFAS analytical gaps: Inter-method evaluation of total organofluorine techniques for AFFF-impacted water
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Dixit, Fuhar, Antell, Edmund H., Faber, Katharine A., Zhang, Chuhui, Pannu, Manmeet W., Plumlee, Megan H., Van Buren, Jean, Doroshow, Abraham, Pomerantz, William C.K., Arnold, William A., Higgins, Christopher P., Peaslee, Graham F., Alvarez-Cohen, Lisa, Sedlak, David L., and Ateia, Mohamed
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- 2024
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13. Cross-sections for [formula omitted]Sc, [formula omitted]Sc, and [formula omitted]Sc from two heavy ion reactions
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Miller, Anthony M., Wilkinson, John T., Brown, Gunnar M., Gan, Jerome, Manukyan, Khachatur, Jin, Yukun, and Peaslee, Graham F.
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- 2025
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14. The Impact of Three Key Paradigm Shifts on Disability, Inclusion, and Autism in Higher Education in England: An Integrative Review
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Eunice S. Y. Tang, Austin Griffiths, and Graham F. Welch
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autism ,disability ,higher education ,inclusion ,music ,music education ,Education (General) ,L7-991 ,Theory and practice of education ,LB5-3640 - Abstract
In the past two decades, students have been more willing to disclose their disability status when entering higher education (HE) in the United Kingdom (UK). Concurrently, higher education institutions (HEIs) have adopted disability policies and service teams for enhancing equality, diversity, and inclusion in the UK. The purpose of this integrative review is to understand the basis of these trends. The article suggests that there have been three major key paradigm shifts that underpin this cultural change. (1) There was a paradigm shift in terms of changing the dominant models for conceptualising disability from a medical model of disability to a social model of disability and to an affirmative model of disability, together with a debate and policy development demonstrating a concern for greater social inclusion and exclusion; (2) with a massive increase in students entering HE and the rising importance of league tables and ranking systems, universities experienced a paradigm shift from teacher-centred learning (TCL) to inclusive student-centred learning and teaching (SCLT); and (3) the increase in autism disclosure in HE signifies a shift in a conceptualisation of autism from a disorder to a disability and an example of neurodiversity.
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- 2024
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15. Therapeutically useful mycobacteriophages BPs and Muddy require trehalose polyphleates
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Wetzel, Katherine S., Illouz, Morgane, Abad, Lawrence, Aull, Haley G., Russell, Daniel A., Garlena, Rebecca A., Cristinziano, Madison, Malmsheimer, Silke, Chalut, Christian, Hatfull, Graham F., and Kremer, Laurent
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- 2023
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16. Diversity of symptom phenotypes in SARS-CoV-2 community infections observed in multiple large datasets
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Martyn Fyles, Karina-Doris Vihta, Carole H Sudre, Harry Long, Rajenki Das, Caroline Jay, Tom Wingfield, Fergus Cumming, William Green, Pantelis Hadjipantelis, Joni Kirk, Claire J Steves, Sebastien Ourselin, Graham F Medley, Elizabeth Fearon, and Thomas House
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Medicine ,Science - Abstract
Abstract Variability in case severity and in the range of symptoms experienced has been apparent from the earliest months of the COVID-19 pandemic. From a clinical perspective, symptom variability might indicate various routes/mechanisms by which infection leads to disease, with different routes requiring potentially different treatment approaches. For public health and control of transmission, symptoms in community cases were the prompt upon which action such as PCR testing and isolation was taken. However, interpreting symptoms presents challenges, for instance, in balancing the sensitivity and specificity of individual symptoms with the need to maximise case finding, whilst managing demand for limited resources such as testing. For both clinical and transmission control reasons, we require an approach that allows for the possibility of distinct symptom phenotypes, rather than assuming variability along a single dimension. Here we address this problem by bringing together four large and diverse datasets deriving from routine testing, a population-representative household survey and participatory smartphone surveillance in the United Kingdom. Through the use of cutting-edge unsupervised classification techniques from statistics and machine learning, we characterise symptom phenotypes among symptomatic SARS-CoV-2 PCR-positive community cases. We first analyse each dataset in isolation and across age bands, before using methods that allow us to compare multiple datasets. While we observe separation due to the total number of symptoms experienced by cases, we also see a separation of symptoms into gastrointestinal, respiratory and other types, and different symptom co-occurrence patterns at the extremes of age. In this way, we are able to demonstrate the deep structure of symptoms of COVID-19 without usual biases due to study design. This is expected to have implications for the identification and management of community SARS-CoV-2 cases and could be further applied to symptom-based management of other diseases and syndromes.
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- 2023
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17. Early Childhood and Musics of the Diaspora
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Wu, Yen-Ting, Welch, Graham F., Barrett, Margaret S., book editor, and Welch, Graham F., book editor
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- 2023
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18. Section Commentary: Special Musical Abilities and Needs
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Ockelford, Adam, Welch, Graham F., Barrett, Margaret S., book editor, and Welch, Graham F., book editor
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- 2023
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19. Researching Music Early Learning and Development: Mapping Methods and Techniques, Locations, Problems, and Theories
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Barrett, Margaret S., Abad, Vicky, Welch, Graham F., Barrett, Margaret S., book editor, and Welch, Graham F., book editor
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- 2023
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20. Building a Profile of Australian Parents’ Musical Beliefs, Values, and Practices
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Abad, Vicky, Broughton, Mary C., Barrett, Margaret S., Welch, Graham F., Barrett, Margaret S., book editor, and Welch, Graham F., book editor
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- 2023
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21. Supporting Children Living with Neurodiversity: An Analysis of Access and Engagement in a Community-Based Music Early Learning Program
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Abad, Vicky, Welch, Graham F., Barrett, Margaret S., Barrett, Margaret S., book editor, and Welch, Graham F., book editor
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- 2023
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22. Music in Early Education and Care Settings for Communication and Language Support
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Pitt, Jessica, Welch, Graham F., Barrett, Margaret S., book editor, and Welch, Graham F., book editor
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- 2023
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23. Future Perspectives
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Welch, Graham F., Barrett, Margaret S., Barrett, Margaret S., book editor, and Welch, Graham F., book editor
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- 2023
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24. Section Introduction
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Welch, Graham F., Ockelford, Adam, Barrett, Margaret S., book editor, and Welch, Graham F., book editor
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- 2023
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25. Section Introduction: Mapping the Landscapes of Music Early Learning and Development
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Barrett, Margaret S., Welch, Graham F., Barrett, Margaret S., book editor, and Welch, Graham F., book editor
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- 2023
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26. Diversity of symptom phenotypes in SARS-CoV-2 community infections observed in multiple large datasets
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Fyles, Martyn, Vihta, Karina-Doris, Sudre, Carole H, Long, Harry, Das, Rajenki, Jay, Caroline, Wingfield, Tom, Cumming, Fergus, Green, William, Hadjipantelis, Pantelis, Kirk, Joni, Steves, Claire J, Ourselin, Sebastien, Medley, Graham F, Fearon, Elizabeth, and House, Thomas
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Statistics - Applications ,Quantitative Biology - Populations and Evolution ,62P10 - Abstract
Through the use of cutting-edge unsupervised classification techniques from statistics and machine learning, we characterise symptom phenotypes among symptomatic SARS-CoV-2 PCR-positive community cases. We first analyse each dataset in isolation and across age bands, before using methods that allow us to compare multiple datasets. While we observe separation due to the total number of symptoms experienced by cases, we also see a separation of symptoms into gastrointestinal, respiratory and other types, and different symptom co-occurrence patterns at the extremes of age. In this way, we are able to demonstrate the deep structure of symptoms of COVID-19 without usual biases due to study design. This is expected to have implications for the identification and management of community SARS-CoV-2 cases and could be further applied to symptom-based management of other diseases and syndromes., Comment: 60 pages; 29 figures
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- 2021
27. Diversity of symptom phenotypes in SARS-CoV-2 community infections observed in multiple large datasets
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Fyles, Martyn, Vihta, Karina-Doris, Sudre, Carole H, Long, Harry, Das, Rajenki, Jay, Caroline, Wingfield, Tom, Cumming, Fergus, Green, William, Hadjipantelis, Pantelis, Kirk, Joni, Steves, Claire J, Ourselin, Sebastien, Medley, Graham F, Fearon, Elizabeth, and House, Thomas
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- 2023
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28. Instructional Models for Course-Based Research Experience (CRE) Teaching
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Hanauer, David I, Graham, Mark J, Arnold, Rachel J, Ayuk, Mary A, Balish, Mitchell F, Beyer, Andrea R, Butela, Kristen A, Byrum, Christine A, Chia, Catherine P, Chung, Hui-Min, Clase, Kari L, Conant, Stephanie, Coomans, Roy J, D’Elia, Tom, Diaz, Jason, Diaz, Arturo, Doty, Jean A, Edgington, Nicholas P, Edwards, Dustin C, Eivazova, Elvira, Emmons, Christine B, Fast, Kayla M, Fisher, Emily J, Fleischacker, Christine L, Frederick, Gregory D, Freise, Amanda C, Gainey, Maria D, Gissendanner, Chris R, Golebiewska, Urszula P, Guild, Nancy A, Hendrickson, Heather L, Herren, Christopher D, Hopson-Fernandes, Margaret S, Hughes, Lee E, Jacobs-Sera, Deborah, Johnson, Allison A, Kirkpatrick, Bridgette L, Klyczek, Karen K, Koga, Ann P, Kotturi, Hari, LeBlanc-Straceski, Janine, Lee-Soety, Julia Y, Leonard, Justin E, Mastropaolo, Matthew D, Merkhofer, Evan C, Michael, Scott F, Mitchell, Jon C, Mohan, Swarna, Monti, Denise L, Noutsos, Christos, Nsa, Imade Y, Peters, Nick T, Plymale, Ruth, Pollenz, Richard S, Porter, Megan L, Rinehart, Claire A, Rosas-Acosta, German, Ross, Joseph F, Rubin, Michael R, Scherer, Anne E, Schroeder, Stephanie C, Shaffer, Christopher D, Sprenkle, Amy B, Sunnen, C Nicole, Swerdlow, Sarah J, Tobiason, Deborah, Tolsma, Sara S, Tsourkas, Philippos K, Ward, Robert E, Ware, Vassie C, Warner, Marcie H, Washington, Jacqueline M, Westover, Kristi M, White, Simon J, Whitefleet-Smith, JoAnn L, Williams, Daniel C, Wolyniak, Michael J, Zeilstra-Ryalls, Jill H, Asai, David J, Hatfull, Graham F, and Sivanathan, Viknesh
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Curriculum and Pedagogy ,Education Systems ,Education ,Quality Education ,Engineering ,Faculty ,Humans ,Mathematics ,Models ,Educational ,Students ,Teaching ,Curriculum and pedagogy - Abstract
The course-based research experience (CRE) with its documented educational benefits is increasingly being implemented in science, technology, engineering, and mathematics education. This article reports on a study that was done over a period of 3 years to explicate the instructional processes involved in teaching an undergraduate CRE. One hundred and two instructors from the established and large multi-institutional SEA-PHAGES program were surveyed for their understanding of the aims and practices of CRE teaching. This was followed by large-scale feedback sessions with the cohort of instructors at the annual SEA Faculty Meeting and subsequently with a small focus group of expert CRE instructors. Using a qualitative content analysis approach, the survey data were analyzed for the aims of inquiry instruction and pedagogical practices used to achieve these goals. The results characterize CRE inquiry teaching as involving three instructional models: 1) being a scientist and generating data; 2) teaching procedural knowledge; and 3) fostering project ownership. Each of these models is explicated and visualized in terms of the specific pedagogical practices and their relationships. The models present a complex picture of the ways in which CRE instruction is conducted on a daily basis and can inform instructors and institutions new to CRE teaching.
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- 2022
29. Surveillance to track progress towards poliomyelitis eradication--worldwide, 2021-2022/Surveillance de la poliomyelite: suivi des progres accomplis vers l'eradication de la maladie a l'echelle mondiale, 2021-2022
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Stehling-Ariza, Tasha, Wilkinson, Amanda L., Diop, Ousmane M., Jorba, Jaume, Asghar, Humayun, Avagnan, Tigran, Grabovac, Varja, Johnson, Ticha, Joshi, Sudhir, Kfutwah, Anfumbom K.W., Sangal, Lucky, Sharif, Salmaan, Wahdan, Ashraf, Tallis, Graham F., and Kovacs, Stephanie D.
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United States. Centers for Disease Control and Prevention ,Poliomyelitis ,Vaccines ,Government ,Health ,World Health Organization - Abstract
Since the Global Polio Eradication Initiative was established in 1988, the number of cases due to wild poliovirus (WPV) has decreased by >99.9%, and WPV serotypes 2 and 3 have [...]
- Published
- 2023
30. Infectious Disease Modelling of HIV Prevention Interventions: A Systematic Review and Narrative Synthesis of Compartmental Models
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Giddings, Rebecca, Indravudh, Pitchaya, Medley, Graham F., Bozzani, Fiammetta, Gafos, Mitzy, Malhotra, Shelly, Terris-Prestholt, Fern, Torres-Rueda, Sergio, and Quaife, Matthew
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- 2023
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31. Spatiotemporal and socioeconomic risk factors for dengue at the province level in Vietnam, 2013-2015: Clustering analysis and regression model
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Ashmore, Polly, Lindahl, Johanna F, Colon-Gonzalez, Felipe J, Nam, Vu Sinh, Dang, Tan Quang, and Medley, Graham F
- Published
- 2020
32. A Bioinformatic Ecosystem for Bacteriophage Genomics: PhaMMSeqs, Phamerator, pdm_utils, PhagesDB, DEPhT, and PhamClust
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Christian H. Gauthier and Graham F. Hatfull
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Bacteriophage ,genomics ,Actinobacteria ,Actinobacteriophage ,Microbiology ,QR1-502 - Abstract
The last thirty years have seen a meteoric rise in the number of sequenced bacteriophage genomes, spurred on by both the rise and success of groups working to isolate and characterize phages, and the rapid and significant technological improvements and reduced costs associated with sequencing their genomes. Over the course of these decades, the tools used to glean evolutionary insights from these sequences have grown more complex and sophisticated, and we describe here the suite of computational and bioinformatic tools used extensively by the integrated research–education communities such as SEA-PHAGES and PHIRE, which are jointly responsible for 25% of all complete phage genomes in the RefSeq database. These tools are used to integrate and analyze phage genome data from different sources, for identification and precise extraction of prophages from bacterial genomes, computing “phamilies” of related genes, and displaying the complex nucleotide and amino acid level mosaicism of these genomes. While over 50,000 SEA-PHAGES students have primarily benefitted from these tools, they are freely available for the phage community at large.
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- 2024
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33. Broadening Access to STEM through the Community College: Investigating the Role of Course-Based Research Experiences (CREs)
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Hanauer, David I., Graham, Mark J., Jacobs-Sera, Deborah, Garlena, Rebecca A., Russell, Daniel A., Sivanathan, Viknesh, Asai, David J., and Hatfull, Graham F.
- Abstract
Broadening access to science, technology, engineering, and mathematics (STEM) professions through the provision of early-career research experiences for a wide range of demographic groups is important for the diversification of the STEM workforce. The size and diversity of the community college system make it a prime educational site for achieving this aim. However, some evidence shows that women and Black, Latinx, and Native American student groups have been hindered in STEM at the community college level. One option for enhancing persistence in STEM is to incorporate the course-based research experiences (CREs) into the curriculum as a replacement for the prevalent traditional laboratory. This can be achieved through the integration of community colleges within extant, multi-institutional CREs such as the SEA-PHAGES program. Using a propensity score-matching technique, students in a CRE and traditional laboratory were compared on a range of psychosocial variables (project ownership, self-efficacy, science identity, scientific community values, and networking). Results revealed higher ratings for women and persons excluded because of their ethnicity or race (PEERs) in the SEA-PHAGES program on important predictors of persistence such as project ownership and science identity. This suggests that the usage of CREs at community colleges could have positive effects in addressing the gender gap for women and enhance inclusiveness for PEER students in STEM.
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- 2022
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34. Costs and Cost-Effectiveness of Biomedical, Non-Surgical HIV Prevention Interventions: A Systematic Literature Review
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Bozzani, Fiammetta M., Terris-Prestholt, Fern, Quaife, Matthew, Gafos, Mitzy, Indravudh, Pitchaya P., Giddings, Rebecca, Medley, Graham F., Malhotra, Shelly, and Torres-Rueda, Sergio
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- 2023
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35. Mycobacterial nucleoid-associated protein Lsr2 is required for productive mycobacteriophage infection
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Dulberger, Charles L., Guerrero-Bustamante, Carlos A., Owen, Siân V., Wilson, Sean, Wuo, Michael G., Garlena, Rebecca A., Serpa, Lexi A., Russell, Daniel A., Zhu, Junhao, Braunecker, Ben J., Squyres, Georgia R., Baym, Michael, Kiessling, Laura L., Garner, Ethan C., Rubin, Eric J., and Hatfull, Graham F.
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- 2023
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36. Phage Therapy for Nontuberculous Mycobacteria: Challenges and Opportunities
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Hatfull, Graham F.
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- 2023
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37. Modelling spatiotemporal patterns of visceral leishmaniasis incidence in two endemic states in India using environment, bioclimatic and demographic data, 2013-2022.
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Swaminathan Subramanian, Rajendran Uma Maheswari, Gopalakrishnan Prabavathy, Mashroor Ahmad Khan, Balan Brindha, Adinarayanan Srividya, Ashwani Kumar, Manju Rahi, Emily S Nightingale, Graham F Medley, Mary M Cameron, Nupur Roy, and Purushothaman Jambulingam
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Arctic medicine. Tropical medicine ,RC955-962 ,Public aspects of medicine ,RA1-1270 - Abstract
BackgroundAs of 2021, the National Kala-azar Elimination Programme (NKAEP) in India has achieved visceral leishmaniasis (VL) elimination (Methodology/principal findingsWe employed spatiotemporal models incorporating environment, climatic and demographic factors as covariates to describe monthly VL cases for 8-years (2013-2020) in 491 and 27 endemic and non-endemic blocks of Bihar and Jharkhand states. We fitted 37 models of spatial, temporal, and spatiotemporal interaction random effects with covariates to monthly VL cases for 6-years (2013-2018, training data) using Bayesian inference via Integrated Nested Laplace Approximation (INLA) approach. The best-fitting model was selected based on deviance information criterion (DIC) and Watanabe-Akaike Information Criterion (WAIC) and was validated with monthly cases for 2019-2020 (test data). The model could describe observed spatial and temporal patterns of VL incidence in the two states having widely differing incidence trajectories, with >93% and 99% coverage probability (proportion of observations falling inside 95% Bayesian credible interval for the predicted number of VL cases per month) during the training and testing periods. PIT (probability integral transform) histograms confirmed consistency between prediction and observation for the test period. Forecasting for 2021-2023 showed that the annual VL incidence is likely to exceed elimination threshold in 16-18 blocks in 4 districts of Jharkhand and 33-38 blocks in 10 districts of Bihar. The risk of VL in non-endemic neighbouring blocks of both Bihar and Jharkhand are less than 0.5 during the training and test periods, and for 2021-2023, the probability that the risk greater than 1 is negligible (PConclusions/significanceThe spatiotemporal model incorporating environmental, bioclimatic, and demographic factors demonstrated that the KAMIS database of the national programmme can be used for block level predictions of long-term spatial and temporal trends in VL incidence and risk of outbreak / resurgence in endemic and non-endemic settings. The database integrated with the modelling framework and a dashboard facility can facilitate such analysis and predictions. This could aid the programme to monitor progress of VL elimination at least one-year ahead, assess risk of resurgence or outbreak in post-elimination settings, and implement timely and targeted interventions or preventive measures so that the NKAEP meet the target of achieving elimination by 2030.
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- 2024
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38. Bacteriophage tRNA-dependent lysogeny: requirement of phage-encoded tRNA genes for establishment of lysogeny
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Carlos A. Guerrero-Bustamante and Graham F. Hatfull
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Mycobacterium ,bacteriophage ,lysogeny ,tRNA ,Microbiology ,QR1-502 - Abstract
ABSTRACT Bacteriophages are large and diverse components of the biosphere, and many phages are temperate. Upon infection, temperate phages can establish lysogeny in which a prophage is typically integrated into the bacterial chromosome. Here, we describe the phenomenon of tRNA-dependent lysogeny, a previously unrecognized behavior of some temperate phages. tRNA-dependent lysogeny is characterized by two unusual features. First, a phage-encoded tyrosine family integrase mediates site-specific recombination between a phage attP site and a bacterial attB site overlapping a host tRNA gene. However, attP and attB share only a short (~10 bp) common core such that a functional tRNA is not reconstructed upon integration. Second, the phage encodes a tRNA of the same isotype as the disrupted but essential host tRNA, complementing its loss, and consequently is required for the survival of lysogenic progeny. As expected, an integrase-defective phage mutant forms turbid plaques, and bacterial progeny are immune to superinfection, but they lack stability, and the prophage is rapidly lost. In contrast, a tRNA-defective phage mutant forms clear plaques and more closely resembles a repressor mutant, and lysogens are recovered only at very low frequency through the use of secondary attachment sites elsewhere in the host genome. Integration-proficient plasmids derived from these phages must also carry a cognate phage tRNA gene for efficient integration, and these may be useful tools for mycobacterial genetics. We show that tRNA-dependent lysogeny is used by phages within multiple different groups of related viruses and may be prevalent elsewhere in the broader phage community.IMPORTANCEBacteriophages are the most numerous biological entities in the biosphere, and a substantial proportion of phages are temperate, forming stable lysogens in which a prophage copy of the genome integrates into the bacterial chromosome. Many phages encode a variety of tRNA genes whose roles are poorly understood, although it has been proposed that they enhance translational efficiencies in lytic growth or that they counteract host defenses that degrade host tRNAs. Here, we show that phage-encoded tRNAs play key roles in the establishment of lysogeny of some temperate phages. They do so by compensating for the loss of tRNA function when phages integrate at an attB site overlapping a tRNA gene but fail to reconstruct the tRNA at the attachment junction. In this system of tRNA-dependent lysogeny, the phage-encoded tRNA is required for lysogeny, and deletion of the phage tRNA gives rise to a clear plaque phenotype and obligate lytic growth.
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- 2024
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39. Bacteriophage infection and killing of intracellular Mycobacterium abscessus
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Alan A. Schmalstig, Andrew Wiggins, Debbie Badillo, Katherine S. Wetzel, Graham F. Hatfull, and Miriam Braunstein
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bacteriophage therapy ,Mycobacterium abscessus ,macrophages ,intracellular bacteria ,nontuberculous mycobacteria ,Microbiology ,QR1-502 - Abstract
ABSTRACTMycobacterium abscessus is a nontuberculous mycobacteria that contributes to the decline and death of patients with lung diseases such as cystic fibrosis and other muco-obstructive airway diseases. M. abscessus is challenging to treat due to its extensive antibiotic resistance and ability to survive inside mammalian cells. An alternative to antibiotics is the therapeutic use of bacteriophages (phages). There are recent cases of phage therapy being used to treat M. abscessus infections in people under compassionate-use conditions. However, little is known about the ability of phages to kill bacteria, such as M. abscessus, which reside in an intracellular environment. Here, we used M. abscessus strains and phages from recent phage therapy cases to determine if phages can enter mammalian cells and if they can infect and kill intracellular M. abscessus. Using fluorescence microscopy, we demonstrate phage uptake by macrophages and lung epithelial cells, and we further demonstrate phage infection of intracellular M. abscessus with fluorescent reporter phages. Transmission electron microscopy was additionally used to image phage infection of intracellular M. abscessus. Together, these findings provide the first visualizations of phage-M. abscessus interactions in an intracellular environment. Finally, we show that phage treatment can significantly reduce the intracellular burden of M. abscessus in a manner that depends on both the specific phage and mammalian cell type involved. These results demonstrate the potential to use phage therapy to treat intracellular bacteria, specifically M. abscessus, while also highlighting the importance of prescreening phage therapy candidates for activity in an intracellular environment.IMPORTANCEAs we rapidly approach a post-antibiotic era, bacteriophage (phage) therapy may offer a solution for treating drug-resistant bacteria. Mycobacterium abscessus is an emerging, multidrug-resistant pathogen that causes disease in people with cystic fibrosis, chronic obstructive pulmonary disease, and other underlying lung diseases. M. abscessus can survive inside host cells, a niche that can limit access to antibiotics. As current treatment options for M. abscessus infections often fail, there is an urgent need for alternative therapies. Phage therapy is being used to treat M. abscessus infections as an option of last resort. However, little is known about the ability of phages to kill bacteria in the host environment and specifically in an intracellular environment. Here, we demonstrate the ability of phages to enter mammalian cells and to infect and kill intracellular M. abscessus. These findings support the use of phages to treat intracellular bacterial pathogens.
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- 2024
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40. Childhood and adolescent factors shaping vulnerability to underage entry into sex work: a quantitative hierarchical analysis of female sex workers in Nairobi, Kenya
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Karen Devries, Helen Anne Weiss, Janet Seeley, Rupert Kaul, Nambusi Kyegombe, Joshua Kimani, Tara S Beattie, Pooja Shah, Alicja Beksinska, Graham F Medley, Rhoda Kabuti, Mary Kungu, Hellen Babu, Zaina Jama, Emily Nyariki, Pauline Ngurukiri, Demtilla Gwala, Daisy Oside, Ruth Kamene, Agnes Watata, Agnes Atieno, Faith Njau, and Mary Akinyi
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Medicine - Abstract
Objective To explore factors associated with early age at entry into sex work, among a cohort of female sex workers (FSWs) in Nairobi, Kenya.Background Younger age at sex work initiation increases the risk of HIV acquisition, condom non-use, violence victimisation and alcohol and/or substance use problems. This study aimed to understand factors in childhood and adolescence that shape the vulnerability to underage sex work initiation.Design Building on previous qualitative research with this cohort, analysis of behavioural–biological cross-sectional data using hierarchical logistic regression.Participants and measures FSWs aged 18–45 years were randomly selected from seven Sex Workers Outreach Programme clinics in Nairobi, and between June and December 2019, completed a baseline behavioural–biological survey. Measurement tools included WHO Adverse Childhood Experiences, Alcohol, Smoking and Substance Involvement Screening Test and questionnaires on sociodemographic information, sexual risk behaviours and gender-based violence. Descriptive statistics and logistic regression were conducted using hierarchical modelling.Results Of the 1003 FSWs who participated in the baseline survey (response rate 96%), 176 (17.5%) initiated sex work while underage (
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- 2023
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41. Reflections on the Concept of Musical Development
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Welch, Graham F.
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'The Sequence of Musical Development' by Swanwick and Tillman was published in the British Journal of Music Education (BJME) in 1986. This year marks its 35th anniversary and provides an occasion to look back on the article's content and legacy. It is also an opportunity to reflect on the antecedents for the article's underlying concepts, as well as how our understanding of children and young people's musical behaviours and development has evolved. Alternate and more nuanced perspectives, both available at the time and since, draw on an expanding, diverse, multidisciplinary research base. These enable us to have a better grasp of the strengths of the original, as well as what continues to need investigation.
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- 2022
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42. Music Teachers' Perceptions of, and Approaches to, Creativity in the Greek-Cypriot Primary Education
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Makris, Stavros, Welch, Graham F., and Himonides, Evangelos
- Abstract
The purpose of this study was to explore music teachers' perceptions of, and approaches to, creativity in Primary education. Even though teachers' perceptions on creativity have been investigated broadly and extensively, qualitative research on music teachers' beliefs nurturing the students' creativity in Primary education are less common. In the present paper, data were collected through in-depth interviews with 10 individuals in the Greek-Cypriot Primary Education. The results of this exploratory study indicated that activities should include the promotion of the students' self-action and autonomy, and the pedagogical initiatives that enable students to come up with original outputs in order to be creative. This understanding, in turn, provided the researchers with access to the teacher participants' perceptions of creativity: a multifaceted concept related to students' autonomy, initiative, and the application of imagination and unrestrained thinking to any musical activity. These findings offer some initial insights and are discussed with respect to their implications for policy and practice. Suggestions for future research are also made.
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- 2022
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43. Instructional Models for Course-Based Research Experience (CRE) Teaching
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Hanauer, David I., Graham, Mark J., Arnold, Rachel J., Ayuk, Mary A., Balish, Mitchell F., Beyer, Andrea R., Butela, Kristen A., Byrum, Christine A., Chia, Catherine P., Chung, Hui-Min, Clase, Kari L., Conant, Stephanie, Coomans, Roy J., D'Elia, Tom, Diaz, Jason, Diaz, Arturo, Doty, Jean A., Edgington, Nicholas P., Edwards, Dustin C., Eivazova, Elvira, Emmons, Christine B., Fast, Kayla M., Fisher, Emily J., Fleischacker, Christine L., Frederick, Gregory D., Freise, Amanda C., Gainey, Maria D., Gissendanner, Chris R., Golebiewska, Urszula P., Guild, Nancy A., Hendrickson, Heather L., Herren, Christopher D., Hopson-Fernandes, Margaret S., Hughes, Lee E., Jacobs-Sera, Deborah, Johnson, Allison A., Kirkpatrick, Bridgette L., Klyczek, Karen K., Koga, Ann P., Kotturi, Hari, LeBlanc-Straceski, Janine, Lee-Soety, Julia Y., Leonard, Justin E., Mastropaolo, Matthew D., Merkhofer, Evan C., Michael, Scott F., Mitchell, Jon C., Mohan, Swarna, Monti, Denise L., Noutsos, Christos, Nsa, Imade Y., Peters, Nick T., Plymale, Ruth, Pollenz, Richard S., Porter, Megan L., Rinehart, Claire A., Rosas-Acosta, German, Ross, Joseph F., Rubin, Michael R., Scherer, Anne E., Schroeder, Stephanie C., Shaffer, Christopher D., Sprenkle, Amy B., Sunnen, C. Nicole, Swerdlow, Sarah J., Tobiason, Deborah, Tolsma, Sara S., Tsourkas, Philippos K., Ward, Robert E., Ware, Vassie C., Warner, Marcie H., Washington, Jacqueline M., Westover, Kristi M., White, Simon J., Whitefleet-Smith, JoAnn L., Williams, Daniel C., Wolyniak, Michael J., Zeilstra-Ryalls, Jill H., Asai, David J., Hatfull, Graham F., and Sivanathan, Viknesh
- Abstract
The course-based research experience (CRE) with its documented educational benefits is increasingly being implemented in science, technology, engineering, and mathematics education. This article reports on a study that was done over a period of 3 years to explicate the instructional processes involved in teaching an undergraduate CRE. One hundred and two instructors from the established and large multi-institutional SEA-PHAGES program were surveyed for their understanding of the aims and practices of CRE teaching. This was followed by large-scale feedback sessions with the cohort of instructors at the annual SEA Faculty Meeting and subsequently with a small focus group of expert CRE instructors. Using a qualitative content analysis approach, the survey data were analyzed for the aims of inquiry instruction and pedagogical practices used to achieve these goals. The results characterize CRE inquiry teaching as involving three instructional models: (1) being a scientist and generating data; (2) teaching procedural knowledge; and (3) fostering project ownership. Each of these models is explicated and visualized in terms of the specific pedagogical practices and their relationships. The models present a complex picture of the ways in which CRE instruction is conducted on a daily basis and can inform instructors and institutions new to CRE teaching.
- Published
- 2022
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44. Predicted Impact of COVID-19 on Neglected Tropical Disease Programs and the Opportunity for Innovation
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Toor, Jaspreet, Adams, Emily R, Aliee, Maryam, Amoah, Benjamin, Anderson, Roy M, Ayabina, Diepreye, Bailey, Robin, Basáñez, Maria-Gloria, Blok, David J, Blumberg, Seth, Borlase, Anna, Rivera, Rocio Caja, Castaño, María Soledad, Chitnis, Nakul, Coffeng, Luc E, Crump, Ronald E, Das, Aatreyee, Davis, Christopher N, Davis, Emma L, Deiner, Michael S, Diggle, Peter J, Fronterre, Claudio, Giardina, Federica, Giorgi, Emanuele, Graham, Matthew, Hamley, Jonathan ID, Huang, Ching-I, Kura, Klodeta, Lietman, Thomas M, Lucas, Tim CD, Malizia, Veronica, Medley, Graham F, Meeyai, Aronrag, Michael, Edwin, Porco, Travis C, Prada, Joaquin M, Rock, Kat S, Le Rutte, Epke A, Smith, Morgan E, Spencer, Simon EF, Stolk, Wilma A, Touloupou, Panayiota, Vasconcelos, Andreia, Vegvari, Carolin, de Vlas, Sake J, Walker, Martin, and Hollingsworth, T Déirdre
- Subjects
Rare Diseases ,Infectious Diseases ,Vector-Borne Diseases ,Orphan Drug ,Infection ,Good Health and Well Being ,COVID-19 ,Humans ,Neglected Diseases ,Pandemics ,SARS-CoV-2 ,Tropical Medicine ,neglected tropical diseases ,coronavirus ,modeling ,Biological Sciences ,Medical and Health Sciences ,Microbiology - Abstract
Due to the COVID-19 pandemic, many key neglected tropical disease (NTD) activities have been postponed. This hindrance comes at a time when the NTDs are progressing towards their ambitious goals for 2030. Mathematical modelling on several NTDs, namely gambiense sleeping sickness, lymphatic filariasis, onchocerciasis, schistosomiasis, soil-transmitted helminthiases (STH), trachoma, and visceral leishmaniasis, shows that the impact of this disruption will vary across the diseases. Programs face a risk of resurgence, which will be fastest in high-transmission areas. Furthermore, of the mass drug administration diseases, schistosomiasis, STH, and trachoma are likely to encounter faster resurgence. The case-finding diseases (gambiense sleeping sickness and visceral leishmaniasis) are likely to have fewer cases being detected but may face an increasing underlying rate of new infections. However, once programs are able to resume, there are ways to mitigate the impact and accelerate progress towards the 2030 goals.
- Published
- 2021
45. A common variant that alters SUN1 degradation associates with hepatic steatosis and metabolic traits in multiple cohorts
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Upadhyay, Kapil K., Du, Xiaomeng, Chen, Yanhua, Buscher, Brandon, Chen, Vincent L., Oliveri, Antonino, Zhao, Raymond, Speliotes, Elizabeth K., and Brady, Graham F.
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- 2023
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46. The Cytotoxic Mycobacteriophage Protein Phaedrus gp82 Interacts with and Modulates the Activity of the Host ATPase, MoxR
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Binsabaan, Saeed A., Freeman, Krista G., Hatfull, Graham F., and VanDemark, Andrew P.
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- 2023
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47. Occurrence and biomagnification of perfluoroalkyl substances (PFAS) in Lake Michigan fishes
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Miranda, Daniele A., Zachritz, Alison M., Whitehead, Heather D., Cressman, Shannon R., Peaslee, Graham F., and Lamberti, Gary A.
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- 2023
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48. Hydrolytic hydrogels tune mesenchymal stem cell persistence and immunomodulation for enhanced diabetic cutaneous wound healing
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Martin, Karen E., Hunckler, Michael D., Chee, Eunice, Caplin, Jeremy D., Barber, Graham F., Kalelkar, Pranav P., Schneider, Rebecca S., and García, Andrés J.
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- 2023
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49. Model-based geostatistical design and analysis of prevalence for soil-transmitted helminths in Kenya: Results from ten-years of the Kenya national school-based deworming programme
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Okoyo, Collins, Minnery, Mark, Orowe, Idah, Owaga, Chrispin, Campbell, Suzy J., Wambugu, Christin, Olick, Nereah, Hagemann, Jane, Omondi, Wyckliff P., McCracken, Kate, Montresor, Antonio, Medley, Graham F., Fronterre, Claudio, Diggle, Peter, and Mwandawiro, Charles
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- 2023
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50. Models of classroom assessment for course-based research experiences
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David I. Hanauer, Tong Zhang, Mark J. Graham, Sandra D. Adams, Yesmi Patricia Ahumada-Santos, Richard M. Alvey, Mauricio S. Antunes, Mary A. Ayuk, María Elena Báez-Flores, Christa T. Bancroft, Tonya C. Bates, Meghan J. Bechman, Elizabeth Behr, Andrea R. Beyer, Rebecca L. Bortz, Dane M. Bowder, Laura A. Briggs, Victoria Brown-Kennerly, Michael A. Buckholt, Sharon K. Bullock, Kristen A. Butela, Christine A. Byrum, Steven M. Caruso, Catherine P. Chia, Rebecca A. Chong, Hui-Min Chung, Kari L. Clase, Sean T. Coleman, D. Parks Collins, Stephanie B. Conant, Brett M. Condon, Pamela L. Connerly, Bernadette J. Connors, Jennifer E. Cook-Easterwood, Katie E. Crump, Tom D’Elia, Megan K. Dennis, Linda C. DeVeaux, Lautaro Diacovich, Iain Duffy, Nicholas P. Edgington, Dustin C. Edwards, Tenny O. G. Egwuatu, Elvira R. Eivazova, Patricia C. Fallest-Strobl, Christy L. Fillman, Ann M. Findley, Emily Fisher, Matthew R. Fisher, Marie P. Fogarty, Amanda C. Freise, Victoria J. Frost, Maria D. Gainey, Amaya M. Garcia Costas, Atenea A. Garza, Hannah E. Gavin, Raffaella Ghittoni, Bryan Gibb, Urszula P. Golebiewska, Anna S. Grinath, Susan M. R. Gurney, Rebekah F. Hare, Steven G. Heninger, John M. Hinz, Lee E. Hughes, Pradeepa Jayachandran, Kristen C. Johnson, Allison A. Johnson, Michelle Kanther, Margaret Kenna, Bridgette L. Kirkpatrick, Karen K. Klyczek, Kathryn P. Kohl, Michael Kuchka, Amber J. LaPeruta, Julia Y. Lee-Soety, Lynn O. Lewis, Heather M. Lindberg, Jaclyn A. Madden, Sergei A. Markov, Matthew D. Mastropaolo, Vinayak Mathur, Sean P. McClory, Evan C. Merkhofer, Julie A. Merkle, Scott F. Michael, Jon C. Mitchell, Sally D. Molloy, Denise L. Monti, María Alejandra Mussi, Holly Nance, Fernando E. Nieto-Fernandez, Jillian C. Nissen, Imade Y. Nsa, Mary G. O’Donnell, Shallee T. Page, Andrea Panagakis, Jesús Ricardo Parra-Unda, Tara A. Pelletier, Tiara G. Perez Morales, Nick T. Peters, Vipaporn Phuntumart, Richard S. Pollenz, Mary L. Preuss, David P. Puthoff, Muideen K. Raifu, Nathan S. Reyna, Claire A. Rinehart, Jessica M. Rocheleau, Ombeline Rossier, Adam D. Rudner, Elizabeth E. Rueschhoff, Amy Ryan, Sanghamitra Saha, Christopher D. Shaffer, Mary Ann V. Smith, Amy B. Sprenkle, Christy L. Strong, C. Nicole Sunnen, Brian P. Tarbox, Louise Temple, Kara R. Thoemke, Michael A. Thomas, Deborah M. Tobiason, Sara S. Tolsma, Julie Torruellas Garcia, Megan S. Valentine, Edwin Vazquez, Robert E. Ward, Catherine M. Ward, Vassie C. Ware, Marcie H. Warner, Jacqueline M. Washington, Daniel E. Westholm, Keith A. Wheaton, Beth M. Wilkes, Elizabeth C. Williams, William H. Biederman, Steven G. Cresawn, Danielle M. Heller, Deborah Jacobs-Sera, Graham F. Hatfull, David J. Asai, and Viknesh Sivanathan
- Subjects
course-based research experience (CURE) ,science education ,assessment ,intergrated research and education community (iREC) ,grading ,Education (General) ,L7-991 - Abstract
Course-based research pedagogy involves positioning students as contributors to authentic research projects as part of an engaging educational experience that promotes their learning and persistence in science. To develop a model for assessing and grading students engaged in this type of learning experience, the assessment aims and practices of a community of experienced course-based research instructors were collected and analyzed. This approach defines four aims of course-based research assessment—(1) Assessing Laboratory Work and Scientific Thinking; (2) Evaluating Mastery of Concepts, Quantitative Thinking and Skills; (3) Appraising Forms of Scientific Communication; and (4) Metacognition of Learning—along with a set of practices for each aim. These aims and practices of assessment were then integrated with previously developed models of course-based research instruction to reveal an assessment program in which instructors provide extensive feedback to support productive student engagement in research while grading those aspects of research that are necessary for the student to succeed. Assessment conducted in this way delicately balances the need to facilitate students’ ongoing research with the requirement of a final grade without undercutting the important aims of a CRE education.
- Published
- 2023
- Full Text
- View/download PDF
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