1. Identification of differentially expressed gene pathways between cytopathogenic and non-cytopathogenic BVDV-1 strains by analysis of the transcriptome of infected primary bovine cells.
- Author
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La Polla R, Testard MC, Goumaidi A, Chapot E, Legras-Lachuer C, and de Saint-Vis B
- Subjects
- Animals, Apoptosis genetics, Apoptosis Regulatory Proteins metabolism, Bovine Virus Diarrhea-Mucosal Disease metabolism, Bovine Virus Diarrhea-Mucosal Disease pathology, Bovine Virus Diarrhea-Mucosal Disease virology, Cattle, Diarrhea Virus 1, Bovine Viral metabolism, Diarrhea Virus 1, Bovine Viral pathogenicity, Epithelial Cells metabolism, Epithelial Cells virology, Gene Expression Profiling, Gene Expression Regulation, Host-Pathogen Interactions genetics, Interleukins genetics, Interleukins metabolism, Lung metabolism, Lung virology, Membrane Potential, Mitochondrial, Mitochondria genetics, Mitochondria metabolism, Mitochondria virology, NF-kappa B genetics, NF-kappa B metabolism, Primary Cell Culture, Respiratory Mucosa metabolism, Respiratory Mucosa virology, Toll-Like Receptors genetics, Toll-Like Receptors metabolism, Virus Replication, Apoptosis Regulatory Proteins genetics, Bovine Virus Diarrhea-Mucosal Disease genetics, Cytopathogenic Effect, Viral genetics, Diarrhea Virus 1, Bovine Viral genetics, Transcriptome, Wnt Signaling Pathway genetics
- Abstract
The bovine viral diarrhea virus 1 (BVDV-1), belonging to the Pestivirus genus, is characterized by the presence of two biotypes, cytopathogenic (cp) or non-cytopathogenic (ncp). For a better understanding of the host pathogen interactions, we set out to identify transcriptomic signatures of bovine lung primary cells (BPCs) infected with a cp or a ncp strain. For this, we used both a targeted approach by reverse transcription droplet digital PCR and whole genome approach using RNAseq. Data analysis showed 3571 differentially expressed transcripts over time (Fold Change >2) and revealed that the most deregulated pathways for cp strain are signaling pathways involved in responses to viral infection such as inflammatory response or apoptosis pathways. Interestingly, our data analysis revealed a deregulation of Wnt signaling pathway, a pathway described in embryogenesis, that was specifically seen with the BVDV-1 cp but not the ncp suggesting a role of this pathway in viral replication., (Copyright © 2021 Elsevier Inc. All rights reserved.)
- Published
- 2022
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