872 results on '"Debu, P"'
Search Results
2. Neoadjuvant Trebananib plus Paclitaxel-based Chemotherapy for Stage II/III Breast Cancer in the Adaptively Randomized I-SPY2 Trial-Efficacy and Biomarker Discovery.
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Albain, Kathy, Yau, Christina, Petricoin, Emanuel, Wolf, Denise, Lang, Julie, Chien, A, Haddad, Tufia, Forero-Torres, Andres, Wallace, Anne, Kaplan, Henry, Pusztai, Lajos, Euhus, David, Nanda, Rita, Elias, Anthony, Clark, Amy, Godellas, Constantine, Boughey, Judy, Isaacs, Claudine, Tripathy, Debu, Lu, Janice, Yung, Rachel, Gallagher, Rosa, Wulfkuhle, Julia, Brown-Swigart, Lamorna, Krings, Gregor, Chen, Yunn, Potter, David, Stringer-Reasor, Erica, Blair, Sarah, Asare, Smita, Wilson, Amy, Hirst, Gillian, Singhrao, Ruby, Buxton, Meredith, Clennell, Julia, Sanil, Ashish, Berry, Scott, Asare, Adam, Matthews, Jeffrey, DeMichele, Angela, Hylton, Nola, Melisko, Michelle, Perlmutter, Jane, Rugo, Hope, Symmans, W, Vant Veer, Laura, Yee, Douglas, Berry, Donald, and Esserman, Laura
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Female ,Humans ,Antineoplastic Combined Chemotherapy Protocols ,Bayes Theorem ,Breast Neoplasms ,Neoadjuvant Therapy ,Paclitaxel ,Receptor ,ErbB-2 ,Receptor ,TIE-2 ,Recombinant Fusion Proteins ,Trastuzumab - Abstract
PURPOSE: The neutralizing peptibody trebananib prevents angiopoietin-1 and angiopoietin-2 from binding with Tie2 receptors, inhibiting angiogenesis and proliferation. Trebananib was combined with paclitaxel±trastuzumab in the I-SPY2 breast cancer trial. PATIENTS AND METHODS: I-SPY2, a phase II neoadjuvant trial, adaptively randomizes patients with high-risk, early-stage breast cancer to one of several experimental therapies or control based on receptor subtypes as defined by hormone receptor (HR) and HER2 status and MammaPrint risk (MP1, MP2). The primary endpoint is pathologic complete response (pCR). A therapy graduates if/when it achieves 85% Bayesian probability of success in a phase III trial within a given subtype. Patients received weekly paclitaxel (plus trastuzumab if HER2-positive) without (control) or with weekly intravenous trebananib, followed by doxorubicin/cyclophosphamide and surgery. Pathway-specific biomarkers were assessed for response prediction. RESULTS: There were 134 participants randomized to trebananib and 133 to control. Although trebananib did not graduate in any signature [phase III probabilities: Hazard ratio (HR)-negative (78%), HR-negative/HER2-positive (74%), HR-negative/HER2-negative (77%), and MP2 (79%)], it demonstrated high probability of superior pCR rates over control (92%-99%) among these subtypes. Trebananib improved 3-year event-free survival (HR 0.67), with no significant increase in adverse events. Activation levels of the Tie2 receptor and downstream signaling partners predicted trebananib response in HER2-positive disease; high expression of a CD8 T-cell gene signature predicted response in HR-negative/HER2-negative disease. CONCLUSIONS: The angiopoietin (Ang)/Tie2 axis inhibitor trebananib combined with standard neoadjuvant therapy increased estimated pCR rates across HR-negative and MP2 subtypes, with probabilities of superiority >90%. Further study of Ang/Tie2 receptor axis inhibitors in validated, biomarker-predicted sensitive subtypes is warranted.
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- 2024
3. Erratum to: Production of antihydrogen atoms by 6 keV antiprotons through a positronium cloud
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Adrich, P., Blumer, P., Caratsch, G., Chung, M., Cladé, P., Comini, P., Crivelli, P., Dalkarov, O., Debu, P., Douillet, A., Drapier, D., Froelich, P., Garroum, N., Guellati-Khelifa, S., Guyomard, J., Hervieux, P.-A., Hilico, L., Indelicato, P., Jonsell, S., Karr, J.-P., Kim, B., Kim, S., Kim, E.-S., Ko, Y. J., Kosinski, T., Kuroda, N., Latacz, B. M., Lee, B., Lee, H., Lee, J., Lim, E., Liszkay, L., Lunney, D., Manfredi, G., Mansoulié, B., Matusiak, M., Nesvizhevsky, V., Nez, F., Niang, S., Ohayon, B., Park, K., Paul, N., Pérez, P., Regenfus, C., Reynaud, S., Roumegou, C., Roussé, J.-Y., Sacquin, Y., Sadowski, G., Sarkisyan, J., Sato, M., Schmidt-Kaler, F., Staszczak, M., Szymczyk, K., Tanaka, T. A., Tuchming, B., Vallage, B., Voronin, A., van der Werf, D. P., Welker, A., Won, D., Wronka, S., Yamazaki, Y., Yoo, K.-H., and Yzombard, P.
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- 2024
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4. Assessment of proximate composition, mineral element profile and antioxidant properties of the edible oyster mushroom grown in Bangladesh
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Sharmin Sultana, Md Shamsuzzaman, Md. Abdus Satter Miah, Akhter Jahan Kakon, Abdullah Hel Mafi, Anupoma Sen, Md. Nurealam Siddiqui, and Debu Kumar Bhattacharjya
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Mushroom ,Pleurotus sp. ,Proximate ,Flavonoids ,Phenols ,Tannins ,Nutrition. Foods and food supply ,TX341-641 - Abstract
Abstract Mushrooms have been considered as a therapeutic and nutrient-rich foods in numerous countries for years due to their significant levels of nutritional components, vitamins and antioxidants. This study aimed to assess the nutrient content, mineral profile and antioxidant properties of eight different kinds of oyster mushrooms (Pleurotus sp.) cultivated in Bangladesh. The mushrooms were analyzed for their moisture content, carbohydrates, proteins, fats, fibers, ash, vitamin A, and vitamin C. The mineral profile included sodium, potassium, calcium, and iron, as well as heavy metals. Antioxidant activities were evaluated through various methods, including phenolic, flavonoid and tannin content, total antioxidant activity, and DPPH (2,2-diphenyl-1-picryl-hydrazyl) scavenging capacity. The findings revealed that the mushrooms under investigation were high in carbohydrate (ranges between 45.25 and 63.22 g/100 g), protein (23.48–33.16 g/100 g) and dietary fiber (42.87–52.31 g/100 g). The total ash content was ranged from 7.28 to 9.41 g/100 g and vitamin C content was 0.020–0.416 mg/100 g. Interestingly, all of the mushrooms had a lower fat content (0.91–2.6%). The mineral profile indicated the presence of varying concentrations of essential elements. Hazardous heavy metals, such as Cd and Cr were not detected in the mushroom sample, while As and Pb were detected but lower than the tolerance levels. The oyster mushrooms exhibited high levels of phenolic, flavonoid, and tannin contents, as well as significant antioxidant capacity. A methanol extract of the oyster mushrooms exhibited scavenging activity against DPPH in a dose dependent manner with the highest capacity (75.4%) obtained at a concentration of 0.2 mg/ml. Our result suggests that these studied oyster mushrooms could be a good source of nutrition and antioxidants, which could be used as functional foods.
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- 2024
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5. Production of antihydrogen atoms by 6 keV antiprotons through a positronium cloud
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Adrich, P., Blumer, P., Caratsch, G., Chung, M., Cladé, P., Comini, P., Crivelli, P., Dalkarov, O., Debu, P., Douillet, A., Drapier, D., Froelich, P., Garroum, N., Guellati-Khelifa, S., Guyomard, J., Hervieux, P-A., Hilico, L., Indelicato, P., Jonsell, S., Karr, J-P., Kim, B., Kim, S., Kim, E-S., Ko, Y. J., Kosinski, T., Kuroda, N., Latacz, B. M., Lee, B., Lee, H., Lee, J., Lim, E., Liszkay, L., Lunney, D., Manfredi, G., Mansoulié, B., Matusiak, M., Nesvizhevsky, V., Nez, F., Niang, S., Ohayon, B., Park, K., Paul, N., Pérez, P., Regenfus, C., Reynaud, S., Roumegou, C., Roussé, J-Y., Sacquin, Y., Sadowski, G., Sarkisyan, J., Sato, M., Schmidt-Kaler, F., Staszczak, M., Szymczyk, K., Tanaka, T. A., Tuchming, B., Vallage, B., Voronin, A., van der Werf, D. P., Won, D., Wronka, S., Yamazaki, Y., Yoo, K-H., and Yzombard, P.
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High Energy Physics - Experiment ,Physics - Instrumentation and Detectors - Abstract
We report on the first production of an antihydrogen beam by charge exchange of 6.1 keV antiprotons with a cloud of positronium in the GBAR experiment at CERN. The antiproton beam was delivered by the AD/ELENA facility. The positronium target was produced from a positron beam itself obtained from an electron linear accelerator. We observe an excess over background indicating antihydrogen production with a significance of 3-4 standard deviations.
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- 2023
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6. Genomic and transcriptomic analyses identify distinctive features of triple-negative inflammatory breast cancer
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Wang, Xiaoping, Zhao, Li, Song, Xingzhi, Wu, Xiaogang, Krishnamurthy, Savitri, Semba, Takashi, Shao, Shan, Knafl, Mark, Coffer, II, Larry W., Alexander, Angela, Vines, Anita, Bopparaju, Swetha, Woodward, Wendy A., Chu, Randy, Zhang, Jianhua, Yam, Clinton, Loo, Lenora W. M., Nasrazadani, Azadeh, Huong, Le-Petross, Woodman, Scott E., Futreal, Andrew, Tripathy, Debu, and Ueno, Naoto T.
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- 2024
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7. Assessment of proximate composition, mineral element profile and antioxidant properties of the edible oyster mushroom grown in Bangladesh
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Sultana, Sharmin, Shamsuzzaman, Md, Miah, Md. Abdus Satter, Kakon, Akhter Jahan, Mafi, Abdullah Hel, Sen, Anupoma, Siddiqui, Md. Nurealam, and Bhattacharjya, Debu Kumar
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- 2024
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8. The DNA repair pathway as a therapeutic target to synergize with trastuzumab deruxtecan in HER2-targeted antibody–drug conjugate–resistant HER2-overexpressing breast cancer
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Lee, Jangsoon, Kida, Kumiko, Koh, Jiwon, Liu, Huey, Manyam, Ganiraju C., Gi, Young Jin, Rampa, Dileep R., Multani, Asha S., Wang, Jing, Jayachandran, Gitanjali, Lee, Dae-Won, Reuben, James M., Sahin, Aysegul, Huo, Lei, Tripathy, Debu, Im, Seock-Ah, and Ueno, Naoto T.
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- 2024
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9. Monitoring response to neoadjuvant chemotherapy in triple negative breast cancer using circulating tumor DNA
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Chen, Jennifer H., Addanki, Sridevi, Roy, Dhruvajyoti, Bassett, Roland, Kalashnikova, Ekaterina, Spickard, Erik, Kuerer, Henry M., Meas, Salyna, Sarli, Vanessa N., Korkut, Anil, White, Jason B., Rauch, Gaiane M., Tripathy, Debu, Arun, Banu K., Barcenas, Carlos H., Yam, Clinton, Sethi, Himanshu, Rodriguez, Angel A., Liu, Minetta C., Moulder, Stacy L., and Lucci, Anthony
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- 2024
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10. Multiparametric MRI–based radiomic models for early prediction of response to neoadjuvant systemic therapy in triple-negative breast cancer
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Mohamed, Rania M., Panthi, Bikash, Adrada, Beatriz E., Boge, Medine, Candelaria, Rosalind P., Chen, Huiqin, Guirguis, Mary S., Hunt, Kelly K., Huo, Lei, Hwang, Ken-Pin, Korkut, Anil, Litton, Jennifer K., Moseley, Tanya W., Pashapoor, Sanaz, Patel, Miral M., Reed, Brandy, Scoggins, Marion E., Son, Jong Bum, Thompson, Alastair, Tripathy, Debu, Valero, Vicente, Wei, Peng, White, Jason, Whitman, Gary J., Xu, Zhan, Yang, Wei, Yam, Clinton, Ma, Jingfei, and Rauch, Gaiane M.
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- 2024
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11. The DNA repair pathway as a therapeutic target to synergize with trastuzumab deruxtecan in HER2-targeted antibody–drug conjugate–resistant HER2-overexpressing breast cancer
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Jangsoon Lee, Kumiko Kida, Jiwon Koh, Huey Liu, Ganiraju C. Manyam, Young Jin Gi, Dileep R. Rampa, Asha S. Multani, Jing Wang, Gitanjali Jayachandran, Dae-Won Lee, James M. Reuben, Aysegul Sahin, Lei Huo, Debu Tripathy, Seock-Ah Im, and Naoto T. Ueno
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HER2+ breast cancer ,HER2 antibody–drug conjugates ,DNA damage repair pathway ,T-DXd ,HER2-directed ADC resistance ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background Anti-HER2 therapies, including the HER2 antibody–drug conjugates (ADCs) trastuzumab emtansine (T-DM1) and trastuzumab deruxtecan (T-DXd), have led to improved survival outcomes in patients with HER2-overexpressing (HER2+) metastatic breast cancer. However, intrinsic or acquired resistance to anti-HER2–based therapies remains a clinical challenge in these patients, as there is no standard of care following disease progression. The purpose of this study was to elucidate the mechanisms of resistance to T-DM1 and T-DXd in HER2+ BC patients and preclinical models and identify targets whose inhibition enhances the antitumor activity of T-DXd in HER2-directed ADC-resistant HER2+ breast cancer in vitro and in vivo. Methods Targeted DNA and whole transcriptome sequencing were performed in breast cancer patient tissue samples to investigate genetic aberrations that arose after anti-HER2 therapy. We generated T-DM1 and T-DXd–resistant HER2+ breast cancer cell lines. To elucidate their resistance mechanisms and to identify potential synergistic kinase targets for enhancing the efficacy of T-DXd, we used fluorescence in situ hybridization, droplet digital PCR, Western blotting, whole-genome sequencing, cDNA microarray, and synthetic lethal kinome RNA interference screening. In addition, cell viability, colony formation, and xenograft assays were used to determine the synergistic antitumor effect of T-DXd combinations. Results We found reduced HER2 expression in patients and amplified DNA repair–related genes in patients after anti-HER2 therapy. Reduced ERBB2 gene amplification in HER2-directed ADC–resistant HER2+ breast cancer cell lines was through DNA damage and epigenetic mechanisms. In HER2-directed ADC–resistant HER2+ breast cancer cell lines, our non-biased RNA interference screening identified the DNA repair pathway as a potential target within the canonical pathways to enhance the efficacy of T-DXd. We validated that the combination of T-DXd with ataxia telangiectasia and Rad3-related inhibitor, elimusertib, led to significant breast cancer cell death in vitro (P
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- 2024
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12. Monitoring response to neoadjuvant chemotherapy in triple negative breast cancer using circulating tumor DNA
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Jennifer H. Chen, Sridevi Addanki, Dhruvajyoti Roy, Roland Bassett, Ekaterina Kalashnikova, Erik Spickard, Henry M. Kuerer, Salyna Meas, Vanessa N. Sarli, Anil Korkut, Jason B. White, Gaiane M. Rauch, Debu Tripathy, Banu K. Arun, Carlos H. Barcenas, Clinton Yam, Himanshu Sethi, Angel A. Rodriguez, Minetta C. Liu, Stacy L. Moulder, and Anthony Lucci
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Liquid biopsy ,ctDNA ,CTC ,Triple negative breast cancer ,Liquid biopsy in neoadjuvant setting ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background Triple negative breast cancer (TNBC) is an aggressive subtype with poor prognosis. We aimed to determine whether circulating tumor DNA (ctDNA) and circulating tumor cell (CTC) could predict response and long-term outcomes to neoadjuvant chemotherapy (NAC). Methods Patients with TNBC were enrolled between 2017–2021 at The University of Texas MD Anderson Cancer Center (Houston, TX). Serial plasma samples were collected at four timepoints: pre-NAC (baseline), 12-weeks after NAC (mid-NAC), after NAC/prior to surgery (post-NAC), and one-year after surgery. ctDNA was quantified using a tumor-informed ctDNA assay (SignateraTM, Natera, Inc.) and CTC enumeration using CellSearch. Wilcoxon and Fisher’s exact tests were used for comparisons between groups and Kaplan–Meier analysis used for survival outcomes. Results In total, 37 patients were enrolled. The mean age was 50 and majority of patients had invasive ductal carcinoma (34, 91.9%) with clinical T2, (25, 67.6%) node-negative disease (21, 56.8%). Baseline ctDNA was detected in 90% (27/30) of patients, of whom 70.4% (19/27) achieved ctDNA clearance by mid-NAC. ctDNA clearance at mid-NAC was significantly associated with pathologic complete response (p = 0.02), whereas CTC clearance was not (p = 0.52). There were no differences in overall survival (OS) and recurrence-free survival (RFS) with positive baseline ctDNA and CTC. However, positive ctDNA at mid-NAC was significantly associated with worse OS and RFS (p = 0.0002 and p = 0.0034, respectively). Conclusions Early clearance of ctDNA served as a predictive and prognostic marker in TNBC. Personalized ctDNA monitoring during NAC may help predict response and guide treatment.
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- 2024
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13. Multiparametric MRI–based radiomic models for early prediction of response to neoadjuvant systemic therapy in triple-negative breast cancer
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Rania M. Mohamed, Bikash Panthi, Beatriz E. Adrada, Medine Boge, Rosalind P. Candelaria, Huiqin Chen, Mary S. Guirguis, Kelly K. Hunt, Lei Huo, Ken-Pin Hwang, Anil Korkut, Jennifer K. Litton, Tanya W. Moseley, Sanaz Pashapoor, Miral M. Patel, Brandy Reed, Marion E. Scoggins, Jong Bum Son, Alastair Thompson, Debu Tripathy, Vicente Valero, Peng Wei, Jason White, Gary J. Whitman, Zhan Xu, Wei Yang, Clinton Yam, Jingfei Ma, and Gaiane M. Rauch
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Triple-negative breast cancer ,Dynamic contrast-enhanced breast MRI ,Diffusion-weighted imaging ,Neoadjuvant systemic therapy ,Treatment response ,Radiomic features ,Medicine ,Science - Abstract
Abstract Triple-negative breast cancer (TNBC) is often treated with neoadjuvant systemic therapy (NAST). We investigated if radiomic models based on multiparametric Magnetic Resonance Imaging (MRI) obtained early during NAST predict pathologic complete response (pCR). We included 163 patients with stage I-III TNBC with multiparametric MRI at baseline and after 2 (C2) and 4 cycles of NAST. Seventy-eight patients (48%) had pCR, and 85 (52%) had non-pCR. Thirty-six multivariate models combining radiomic features from dynamic contrast-enhanced MRI and diffusion-weighted imaging had an area under the receiver operating characteristics curve (AUC) > 0.7. The top-performing model combined 35 radiomic features of relative difference between C2 and baseline; had an AUC = 0.905 in the training and AUC = 0.802 in the testing set. There was high inter-reader agreement and very similar AUC values of the pCR prediction models for the 2 readers. Our data supports multiparametric MRI-based radiomic models for early prediction of NAST response in TNBC.
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- 2024
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14. Clinical significance and biology of circulating tumor DNA in high-risk early-stage HER2-negative breast cancer receiving neoadjuvant chemotherapy
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Magbanua, Mark Jesus M, Brown Swigart, Lamorna, Ahmed, Ziad, Sayaman, Rosalyn W, Renner, Derrick, Kalashnikova, Ekaterina, Hirst, Gillian L, Yau, Christina, Wolf, Denise M, Li, Wen, Delson, Amy L, Asare, Smita, Liu, Minetta C, Albain, Kathy, Chien, A Jo, Forero-Torres, Andres, Isaacs, Claudine, Nanda, Rita, Tripathy, Debu, Rodriguez, Angel, Sethi, Himanshu, Aleshin, Alexey, Rabinowitz, Matthew, Perlmutter, Jane, Symmans, W Fraser, Yee, Douglas, Hylton, Nola M, Esserman, Laura J, DeMichele, Angela M, Rugo, Hope S, and van 't Veer, Laura J
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Clinical Trials and Supportive Activities ,Human Genome ,Cancer ,Genetics ,Clinical Research ,Cancer Genomics ,Breast Cancer ,Women's Health ,Good Health and Well Being ,Humans ,Female ,Breast Neoplasms ,Triple Negative Breast Neoplasms ,Circulating Tumor DNA ,Neoadjuvant Therapy ,Clinical Relevance ,Antineoplastic Combined Chemotherapy Protocols ,Biology ,Receptor ,ErbB-2 ,Receptor ,erbB-2 ,circulating tumor DNA ,gene expression ,neoadjuvant chemotherapy ,pathologic complete response ,receptor subtype ,residual cancer burden ,Neurosciences ,Oncology & Carcinogenesis ,Biochemistry and cell biology ,Oncology and carcinogenesis - Abstract
Circulating tumor DNA (ctDNA) analysis may improve early-stage breast cancer treatment via non-invasive tumor burden assessment. To investigate subtype-specific differences in the clinical significance and biology of ctDNA shedding, we perform serial personalized ctDNA analysis in hormone receptor (HR)-positive/HER2-negative breast cancer and triple-negative breast cancer (TNBC) patients receiving neoadjuvant chemotherapy (NAC) in the I-SPY2 trial. ctDNA positivity rates before, during, and after NAC are higher in TNBC than in HR-positive/HER2-negative breast cancer patients. Early clearance of ctDNA 3 weeks after treatment initiation predicts a favorable response to NAC in TNBC only. Whereas ctDNA positivity associates with reduced distant recurrence-free survival in both subtypes. Conversely, ctDNA negativity after NAC correlates with improved outcomes, even in patients with extensive residual cancer. Pretreatment tumor mRNA profiling reveals associations between ctDNA shedding and cell cycle and immune-associated signaling. On the basis of these findings, the I-SPY2 trial will prospectively test ctDNA for utility in redirecting therapy to improve response and prognosis.
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- 2023
15. Global multi-societies endorsement of the MAFLD definition
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Mohamed Alboraie, Tawesak Tanwandee, Xiaoyuan Xu, Dafina Nikolova, Enrique Carrera Estupiñan, Hasmik Ghazinyan, Sameer Alawadhi, Ponsiano Ocama, Gulnara Aghayeva, Alejandro Piscoya, Taghreed Farahat, Pramendra Prasad, Cosmas Rinaldi Adithya Lesmana, Shashank R Joshi, Said Al-Busafi, Vladimir Milivojevic, Violet Kayamba, Yeong Yeh Lee, Shahinul Alam, Chengwei Tang, Wei-Fen Xie, Moutaz Derbala, Yuemin Nan, Dennis Ndububa, Hongting Zheng, Jiajun Zhao, Nawal Alkhalidi, Yahya Ghanem, Phunchai Charatcharoenwitthaya, Mamun Mahtab, Nagwa N. Hegazy, Edford Sinkala, Cecil Kwaku Dovia, Moussa Ali Mahamat, Mortada El-Shabrawi, Dao Viet Hang, Shlomo Vinker, Bilal Hotayt, Mohammed Tahiri, Pavel Bogomolov, Nawal Afredj, Inass Shaltout, Reda Elwakil, Abd Elkhalek Hamed, Lubna Kamani, Maheeba Abdulla, Constant Assi, Oidov Baatarkhuu, Munira Al Tarrah, Yousef Ajlouni, Bounena Abidine, Christopher Muñoz, Mohammad Ali, Emad Salama, Abdelaziz Elamin, Iqbal Ahmad Memon, Aram Mirijanyan, Sajjad Jamil, Alexander V. Nersesov, Nseabasi Ekanem, Waseem Hamoudi, Bisi Bright, Teresa Casanovas, Ewaoche Itodo, Esther A Torres, Maja Karin, Enver Zerem, Svetlana Turcan, Audrius Dulskas, Iulianna Lupasco, Alina Jucov, Christian Tzeuton, Roger Sombie, Kateryna Lapshyna, Andrriy Dorofeyev, Yaw A Awuku, Hilal Ünalmış Duda, Rijimra Ande, Nehal El Koofy, Naglaa Kamal, Ziyan Pan, Angela Peltec, Liang Qiao, Andry Lalaina Rinà Rakotozafindrabe, Ahmed Salama, Reham Soliman, Badre Wafaa, Marinela Debu, Eileen A Micah, Gamal Shiha, Mohammed Eslam, and Yasser Fouad
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Specialties of internal medicine ,RC581-951 - Published
- 2024
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16. Outcomes of male patients with HR+/HER2– advanced breast cancer receiving palbociclib in the real-world POLARIS study
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Blum, Joanne L., DiCristo, Caroline, Gordon, David, Karuturi, Meghan S., Oubre, David, Jepsen, Erin, Cuevas, Juan, Lakhanpal, Shailendra, Montelongo, Monica Z., Zhang, Zhe, Cappelleri, Joseph C., Wang, Yao, and Tripathy, Debu
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- 2024
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17. Evaluating the Effects of Climate Change on Thermal Bioclimatic Indices in a Tropical Region Using Climate Projections from the Bias-Corrected CMIP6 Model
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Kamruzzaman, Mohammad, Islam, H. M. Touhidul, Ahmed, Sharif, Bhattacharjya, Debu Kumar, Khan, Md. Shah Kamal, Mahmud, Golam Iftekhar, Almazroui, Mansour, and Shahid, Shamsuddin
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- 2023
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18. Application and evaluation of plant-based edible active coatings to enhance the shelf-life and quality attributes of Jara lebu (Citrus medica)
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Md. Mahfuzur Rob, Md. Mahfujul Haque Pappu, Md. Shoaib Arifin, Tahsin Nusrat Era, Masuma Zahan Akhi, Debu Kumar Bhattacharjya, Md. Shahidullah Kayshar, and Md. Fahad Jubayer
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Edible coating ,Citrus ,Holy basil ,Sustainability ,Traditional foods ,Nutrition. Foods and food supply ,TX341-641 - Abstract
Abstract Edible coatings for fruits and vegetables are the subject of intensive agro-based research. These coatings provide value to the product due to their multifunctionality and sustainability. The current study focuses on the development and evaluation of plant-based edible active coatings for Jara lebu (Citrus medica), with the aim of determining the effectiveness of these coatings in extending the shelf-life and preserving the quality attributes. Different blends of corn starch and various plant extracts were formulated and all formulations were applied by immersion onto the fruit surface. The study had five treatment groups: T0, T1, T2, T3, and T4. T0 served as the control group, while T1 consisted of a mixture of 2% corn starch and 0.5% glycerol. T2 included a combination of 2% corn starch, 0.5% glycerol, and 1.5% holy basil. T3 comprises 2% corn starch, 0.5% glycerol, and 1.5% wild turmeric. Lastly, T4 consisted of 2% corn starch, 0.5% glycerol, and 1.5% Indian pennywort. Control and coated samples were kept under the same conditions for 35 days before being evaluated for changes in their physiological, physicochemical, and sensory qualities. Coated sample T2 significantly prolonged the shelf-life of Jara lebu samples, having the least weight reduction (26.25%) and retaining most of the essential nutrients (TSS = 7.09%, pH = 3.0, vitamin C = 22.03 mg/100 g, TPC = 44.57 mg GAE/g DW, TFC = 45.24 mg QE/g DW, antioxidant = 86.09%). This sample received the highest overall acceptability score, a maximum of 8.24. Sensory evaluations revealed no adverse effects on taste, aroma or appearance, suggesting these coatings can be an eco-friendly and efficient method for preserving the freshness and quality of Jara lebu and potentially other citrus fruits.
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- 2024
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19. Cell Consistency Evaluation Method Based on Multiple Unsupervised Learning Algorithms
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Jiang Chang, Xianglong Gu, Jieyun Wu, and Debu Zhang
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battery consistency ,charging segment data ,unsupervised learning ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
Unsupervised learning algorithms can effectively solve sample imbalance. To address battery consistency anomalies in new energy vehicles, we adopt a variety of unsupervised learning algorithms to evaluate and predict the battery consistency of three vehicles using charging fragment data from actual operating conditions. We extract battery-related features, such as the mean of maximum difference, standard deviation, and entropy of batteries and then apply principal component analysis to reduce the dimensionality and record the amount of preserved information. We then build models through a collection of unsupervised learning algorithms for the anomaly detection of cell consistency faults. We also determine whether unsupervised and supervised learning algorithms can address the battery consistency problem and document the parameter tuning process. In addition, we compare the prediction effectiveness of charging and discharging features modeled individually and in combination, determine the choice of charging and discharging features to be modeled in combination, and visualize the multidimensional data for fault detection. Experimental results show that the unsupervised learning algorithm is effective in visualizing and predicting vehicle core conformance faults, and can accurately predict faults in real time. The “distance+boxplot” algorithm shows the best performance with a prediction accuracy of 80%, a recall rate of 100%, and an F1 of 0.89. The proposed approach can be applied to monitor battery consistency faults in real time and reduce the possibility of disasters arising from consistency faults.
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- 2024
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20. Erratum to: Production of antihydrogen atoms by 6 keV antiprotons through a positronium cloud
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P. Adrich, P. Blumer, G. Caratsch, M. Chung, P. Cladé, P. Comini, P. Crivelli, O. Dalkarov, P. Debu, A. Douillet, D. Drapier, P. Froelich, N. Garroum, S. Guellati-Khelifa, J. Guyomard, P.-A. Hervieux, L. Hilico, P. Indelicato, S. Jonsell, J.-P. Karr, B. Kim, S. Kim, E.-S. Kim, Y. J. Ko, T. Kosinski, N. Kuroda, B. M. Latacz, B. Lee, H. Lee, J. Lee, E. Lim, L. Liszkay, D. Lunney, G. Manfredi, B. Mansoulié, M. Matusiak, V. Nesvizhevsky, F. Nez, S. Niang, B. Ohayon, K. Park, N. Paul, P. Pérez, C. Regenfus, S. Reynaud, C. Roumegou, J.-Y. Roussé, Y. Sacquin, G. Sadowski, J. Sarkisyan, M. Sato, F. Schmidt-Kaler, M. Staszczak, K. Szymczyk, T. A. Tanaka, B. Tuchming, B. Vallage, A. Voronin, D. P. van der Werf, A. Welker, D. Won, S. Wronka, Y. Yamazaki, K.-H. Yoo, and P. Yzombard
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Astrophysics ,QB460-466 ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 - Published
- 2024
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21. The Marxist concept of national question and the analysis of Ethiopian reality during the Derg regime (1974 to 1991)
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Gebeyehu Temesgen Duressa, Tesema Ta’a, and Deressa Debu
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Marxist-Leninist Theory ,the national question ,Ethiopian condition ,Derg regime ,Haile Fida ,Samuel Adu-Gyamfi, History and Political Studies, Kwame Nkrumah University of Science and Technology College of Arts and Social Science, Kumasi, Ghana ,Fine Arts ,Arts in general ,NX1-820 ,General Works ,History of scholarship and learning. The humanities ,AZ20-999 - Abstract
AbstractThis article examines the Marxist concept of the national question and the analysis of Ethiopian reality during the Derg government (1974–1991). As the title indicates, this study explained the interplay between the Marxist concepts of national questions in general and analyzed how the nationalities questions in Ethiopia were treated under the Derg government (1974–1991) specifically. Since very recently, several studies have been done on nationalities questions particularly focusing on post-1991 ethnic-based federalism in Ethiopia. However, no attention is given to nationality issues in Ethiopia under the Marxist regime(Derg). To fill this gap, the researchers collected both primary and secondary sources. The collected data were then arranged, presented, and thoroughly examined. Ultimately, a qualitative research approach and a descriptive research design were used to interpret the data. Finally, the finding of this study concludes that the Derg regime failed to answer the nationalities question in Ethiopia based on Marxist-Leninist views. Therefore, although the Derg initially promised to answer the nationality question in Ethiopia, its promises did not go beyond words.
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- 2024
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22. Positron accumulation in the GBAR experiment
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Blumer, P., Charlton, M., Chung, M., Clade, P., Comini, P., Crivelli, P., Dalkarov, O., Debu, P., Dodd, L., Douillet, A., Guellati, S., Hervieux, P. -A, Hilico, L., Indelicato, P., Janka, G., Jonsell, S., Karr, J. -P., Kim, B. H., Kim, E. S., Kim, S. K., Ko, Y., Kosinski, T., Kuroda, N., Latacz, B. M., Lee, B., Lee, H., Lee, J., Leitee, A. M. M., Leveque, K., Lim, E., Liszkay, L., Lotrus, P., Lunney, D., Manfredi, G., Mansoulie, B., Matusiak, M., Mornacchi, G., Nesvizhevsky, V., Nez, F., Niang, S., Nishi, R., Ohayon, B., Park, K., Paul, N., Perez, P., Procureur, S., Radics, B., Regenfus, C., Reymond, J. -M., Reynaud, S., Rousse, J. -Y., Rousselle, O., Rubbia, A., Rzadkiewicl, J., Sacquin, Y., Schmidt-Kaler, F., Staszczak, M., Szymczyk, K., Tanaka, T., Tuchming, B., Vallage, B., Voronin, A., van der Werf, D. P., Wolf, S., Won, D., Wronka, S., Yamazaki, Y., Yoo, K. H., Yzombard, P., and Baker, C. J.
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Physics - Plasma Physics - Abstract
We present a description of the GBAR positron (e+) trapping apparatus, which consists of a three stage Buffer Gas Trap (BGT) followed by a High Field Penning Trap (HFT), and discuss its performance. The overall goal of the GBAR experiment is to measure the acceleration of the neutral antihydrogen (H) atom in the terrestrial gravitational field by neutralising a positive antihydrogen ion (H+), which has been cooled to a low temperature, and observing the subsequent H annihilation following free fall. To produce one H+ ion, about 10^10 positrons, efficiently converted into positronium (Ps), together with about 10^7 antiprotons (p), are required. The positrons, produced from an electron linac-based system, are accumulated first in the BGT whereafter they are stacked in the ultra-high vacuum HFT, where we have been able to trap 1.4(2) x 10^9 positrons in 1100 seconds.
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- 2022
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23. Efficacy and tolerance of photodynamic therapy with methyl‐aminolevulinic acid in early‐stage mycosis fungoides: A real‐life retrospective study
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Chloé Barrachin, Diane Labau, Andréa Kolontee, Anca Debu, Céline Girard, Aurélie Du Thanh, and Olivier Dereure
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methyl‐aminolevulinic acid‐photodynamic therapy ,mycosis fungoides ,response predictive factors ,Dermatology ,RL1-803 ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Abstract Background Methyl‐aminolevulinate‐based photodynamic therapy (MAL‐PDT) has been successfully used in early‐stage mycosis fungoides (MF) lesions. However, the long‐term outcome of initially responding lesions has not been systematically investigated to date. To address this issue, we hereby report a large series of early‐stage MF lesions treated with MAL‐PDT and followed up for 1 year after initial treatment. Objectives The objective of this study was to retrospectively evaluate short‐ and middle‐term clinical results of MAL‐PDT on early‐stage MF lesions (patches and plaques) and to identify characteristics possibly predictive of effectiveness. Methods Data from all early‐stage MF lesions (plaques and patches) treated with MAL‐PDT between 2010 and 2017 in a tertiary referral centre were retrospectively collected. Primary endpoints were initial clinical response rated as complete response (CR) or partial response (PR), and the rate of relapse of initially responding lesions was further evaluated 1 year after the last PDT session. Secondary endpoints addressed tolerance and the relevancy of predefined parameters possibly predictive of CR achievement. Results A total of 62 lesions from 30 patients with early‐stage MF (21 Ia, nine Ib) were treated and analysed. At the 6‐week evaluation, the overall clinical response rate (RR) was 87.25% (55% CR and 32.25% PR) with a mean of 2.7 PDT sessions per lesion. Twenty‐five percent of initially responding lesions relapsed locally within 1 year. Transient, although significant, pain occurred at least once in 30% of patients. In univariate analysis, the location of lesions on sun‐protected areas was the only parameter statistically related to CR, a result confirmed in multivariate analysis. Conclusions Overall, these data confirm the interest in the use of MAL‐PDT in early‐stage MF even for deep (folliculotropic) lesions with a higher efficiency on sun‐protected areas. Furthermore, this study demonstrates for the first time that the response is often sustained over time. Accordingly, MAL‐PDT should be considered in the management of early‐stage MF, especially in oligolesional forms or in residual lesions refractory to systemic treatment.
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- 2023
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24. Quality of life of COVID-19 recovered patients: a 1-year follow-up study from Bangladesh
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Hawlader, Mohammad Delwer Hossain, Rashid, Md Utba, Khan, Md Abdullah Saeed, Liza, Mowshomi Mannan, Akter, Sharmin, Hossain, Mohammad Ali, Rahman, Tajrin, Barsha, Sabrina Yesmin, Shifat, Alberi Afifa, Hossian, Mosharop, Mishu, Tahmina Zerin, Sagar, Soumik Kha, Manna, Ridwana Maher, Ahmed, Nawshin, Debu, Sree Shib Shankar Devnath, Chowdhury, Irin, Sabed, Samanta, Ahmed, Mashrur, Borsha, Sabrina Afroz, Al Zafar, Faraz, Hyder, Sabiha, Enam, Abdullah, Babul, Habiba, Nur, Naima, Haque, Miah Md. Akiful, Roy, Shopnil, Tanvir Hassan, K. M., Rahman, Mohammad Lutfor, Nabi, Mohammad Hayatun, and Dalal, Koustuv
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- 2023
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25. Epigenetically upregulating TROP2 and SLFN11 enhances therapeutic efficacy of TROP2 antibody drug conjugate sacitizumab govitecan
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Zhao, Ming, DiPeri, Timothy P., Raso, Maria Gabriela, Zheng, Xiaofeng, Rizvi, Yasmeen Qamar, Evans, Kurt W., Yang, Fei, Akcakanat, Argun, Roberto Estecio, Marco, Tripathy, Debu, Dumbrava, Ecaterina E., Damodaran, Senthil, and Meric-Bernstam, Funda
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- 2023
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26. Prediction of pathologic complete response to neoadjuvant systemic therapy in triple negative breast cancer using deep learning on multiparametric MRI
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Zhou, Zijian, Adrada, Beatriz E., Candelaria, Rosalind P., Elshafeey, Nabil A., Boge, Medine, Mohamed, Rania M., Pashapoor, Sanaz, Sun, Jia, Xu, Zhan, Panthi, Bikash, Son, Jong Bum, Guirguis, Mary S., Patel, Miral M., Whitman, Gary J., Moseley, Tanya W., Scoggins, Marion E., White, Jason B., Litton, Jennifer K., Valero, Vicente, Hunt, Kelly K., Tripathy, Debu, Yang, Wei, Wei, Peng, Yam, Clinton, Pagel, Mark D., Rauch, Gaiane M., and Ma, Jingfei
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- 2023
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27. Identifying associated factors in relation to health-related quality of life among postpartum women in Jimma town: A community-based cross-sectional study
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Abebe Debu Liga, Yasin Negash Jabir, Seble Assefa, Gurmesa Tura Debelew, and Bekalu Teka Worku
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Associated factors ,Health-related QoL ,Postpartum women ,Jimma ,Ethiopia ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Background: The quality of life (QoL) of women during the postpartum period is affected by their living circumstances, reproductive history, exposure to and use of antenatal care, etc. The quality of life (QoL) issues associated to postpartum health among Ethiopian women have not been adequately examined in studies. Therefore, this study identified associated factors in relation to the health-related quality of life (QOL) among postpartum women in Jimma Town, Ethiopia. Methods: A structured face-to-face interview and a self-administered questionnaire were utilized in a community-based cross-sectional study to obtain data from 397 postpartum women from May 15 to June 14, 2022, using a multistage sampling strategy. The data analysis utilized several descriptive statistics. Multiple logistic models were run on factors that were significant at the 25 % level in univariate analysis. Adjusted odds ratios and 95 % confidence intervals were computed to identify associated factors. Results: The majority (51.2 %) of postpartum women had a low health-related quality of life, with a mean score of 50.58. Women poor health-related quality of life (QoL) was associated with age (AOR = 10.09; CI: 3.45–29.51), non-formal education of partners (AOR = 3.67; CI: 1.25–10.72), multiparousness (AOR = 2.21; CI: 1.14–4.29), unplanned pregnancy (AOR = 7.36; CI: 1.98–27.37), giving birth to a dead baby (AOR = 3.15; CI: 1.54–6.42), and not admitted to the hospital while pregnant (AOR = 5.50; CI: 3.86–26.30). Conclusion: The finding revealed that the majority of postpartum women reported poorer health-related QoL. Thus, stakeholders should give attention to significant factors to set up measures to prevent and improve women's postpartum health-related QoL, and should be aware of women about the risk associated with poor health-related QoL.
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- 2024
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28. Updated Overall Survival of Ribociclib plus Endocrine Therapy versus Endocrine Therapy Alone in Pre- and Perimenopausal Patients with HR+/HER2− Advanced Breast Cancer in MONALEESA-7: A Phase III Randomized Clinical Trial
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Lu, Yen-Shen, Im, Seock-Ah, Colleoni, Marco, Franke, Fabio, Bardia, Aditya, Cardoso, Fatima, Harbeck, Nadia, Hurvitz, Sara, Chow, Louis, Sohn, Joohyuk, Lee, Keun Seok, Campos-Gomez, Saul, Vazquez, Rafael Villanueva, Jung, Kyung Hae, Babu, K Govind, Wheatley-Price, Paul, De Laurentiis, Michelino, Im, Young-Hyuck, Kuemmel, Sherko, El-Saghir, Nagi, O'Regan, Ruth, Gasch, Claudia, Solovieff, Nadia, Wang, Craig, Wang, Yongyu, Chakravartty, Arunava, Ji, Yan, and Tripathy, Debu
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Clinical Trials and Supportive Activities ,Breast Cancer ,Cancer ,Clinical Research ,Evaluation of treatments and therapeutic interventions ,6.1 Pharmaceuticals ,Aminopyridines ,Antineoplastic Combined Chemotherapy Protocols ,Aromatase Inhibitors ,Breast Neoplasms ,Female ,Humans ,Perimenopause ,Purines ,Receptor ,ErbB-2 ,Receptors ,Estrogen ,Receptor ,erbB-2 ,Oncology & Carcinogenesis ,Clinical sciences ,Oncology and carcinogenesis - Abstract
PurposeRibociclib plus endocrine therapy (ET) demonstrated a statistically significant progression-free survival and overall survival (OS) benefit in the phase III MONALEESA-7 trial of pre-/perimenopausal patients with hormone receptor (HR)-positive (HR+), HER2-negative (HER2-) advanced breast cancer (ABC). The median OS was not reached in the ribociclib arm in the protocol-specified final analysis; we hence performed an exploratory OS and additional outcomes analysis with an extended follow-up (median, 53.5 months).Patients and methodsPatients were randomized to receive ET [goserelin plus nonsteroidal aromatase inhibitor (NSAI) or tamoxifen] with ribociclib or placebo. OS was evaluated with a stratified Cox proportional hazard model and summarized with Kaplan-Meier methods.ResultsThe intent-to-treat population included 672 patients. Median OS was 58.7 months with ribociclib versus 48.0 months with placebo [hazard ratio = 0.76; 95% confidence interval (CI), 0.61-0.96]. Kaplan-Meier estimated OS at 48 months was 60% and 50% with ribociclib and placebo, respectively. Subgroup analyses were generally consistent with the OS benefit, including patients who received NSAI and patients aged less than 40 years. Subsequent antineoplastic therapies following discontinuation were balanced between the ribociclib (77%) and placebo (78%) groups. Use of cyclin-dependent kinase 4/6 inhibitors after discontinuation was higher with placebo (26%) versus ribociclib (13%). Time to first chemotherapy was significantly delayed with ribociclib versus placebo. No drug-drug interactions were observed between ribociclib and either NSAI.ConclusionsRibociclib plus ET continued to show significantly longer OS than ET alone in pre-/perimenopausal patients, including patients aged less than 40 years, with HR+/HER2- ABC with 53.5 months of median follow-up (ClinicalTrials.gov, NCT02278120).
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- 2022
29. Production of antihydrogen atoms by 6 keV antiprotons through a positronium cloud
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P. Adrich, P. Blumer, G. Caratsch, M. Chung, P. Cladé, P. Comini, P. Crivelli, O. Dalkarov, P. Debu, A. Douillet, D. Drapier, P. Froelich, N. Garroum, S. Guellati-Khelifa, J. Guyomard, P.-A. Hervieux, L. Hilico, P. Indelicato, S. Jonsell, J.-P. Karr, B. Kim, S. Kim, E.-S. Kim, Y. J. Ko, T. Kosinski, N. Kuroda, B. M. Latacz, B. Lee, H. Lee, J. Lee, E. Lim, L. Liszkay, D. Lunney, G. Manfredi, B. Mansoulié, M. Matusiak, V. Nesvizhevsky, F. Nez, S. Niang, B. Ohayon, K. Park, N. Paul, P. Pérez, C. Regenfus, S. Reynaud, C. Roumegou, J.-Y. Roussé, Y. Sacquin, G. Sadowski, J. Sarkisyan, M. Sato, F. Schmidt-Kaler, M. Staszczak, K. Szymczyk, T. A. Tanaka, B. Tuchming, B. Vallage, A. Voronin, D. P. van der Werf, A. Welker, D. Won, S. Wronka, Y. Yamazaki, K.-H. Yoo, and P. Yzombard
- Subjects
Astrophysics ,QB460-466 ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 - Abstract
Abstract We report on the first production of an antihydrogen beam by charge exchange of 6.1 keV antiprotons with a cloud of positronium in the GBAR experiment at CERN. The 100 keV antiproton beam delivered by the AD/ELENA facility was further decelerated with a pulsed drift tube. A 9 MeV electron beam from a linear accelerator produced a low energy positron beam. The positrons were accumulated in a set of two Penning–Malmberg traps. The positronium target cloud resulted from the conversion of the positrons extracted from the traps. The antiproton beam was steered onto this positronium cloud to produce the antiatoms. We observe an excess over background indicating antihydrogen production with a significance of 3–4 standard deviations.
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- 2023
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30. A phase II study of neoadjuvant atezolizumab and nab-paclitaxel in patients with anthracycline-resistant early-stage triple-negative breast cancer
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Yam, Clinton, Mittendorf, Elizabeth A., Garber, Haven R., Sun, Ryan, Damodaran, Senthil, Murthy, Rashmi K., Ramirez, David, Karuturi, Meghan, Layman, Rachel M., Ibrahim, Nuhad, Rauch, Gaiane M., Adrada, Beatriz E., Candelaria, Rosalind P., White, Jason B., Ravenberg, Elizabeth, Clayborn, Alyson, Ding, Qing Qing, Symmans, W. Fraser, Prabhakaran, Sabitha, Thompson, Alastair M., Valero, Vicente, Tripathy, Debu, Huo, Lei, Moulder, Stacy L., and Litton, Jennifer K.
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- 2023
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31. Targeting chemotherapy resistance in mesenchymal triple-negative breast cancer: a phase II trial of neoadjuvant angiogenic and mTOR inhibition with chemotherapy
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Abuhadra, Nour, Sun, Ryan, Bassett, Jr, Roland L., Huo, Lei, Chang, Jeffrey T., Teshome, Mediget, Clayborn, Alyson R., White, Jason B., Ravenberg, Elizabeth E., Adrada, Beatriz E., Candelaria, Rosalind P., Yang, Wei, Ding, Qingqing, Symmans, W. Fraser, Arun, Banu, Damodaran, Senthil, Koenig, Kimberly B., Layman, Rachel M., Lim, Bora, Litton, Jennifer K., Thompson, Alastair, Ueno, Naoto T., Piwnica-Worms, Helen, Hortobagyi, Gabriel N., Valero, Vicente, Tripathy, Debu, Rauch, Gaiane M., Moulder, Stacy, and Yam, Clinton
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- 2023
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32. Genomic Profiling of Premenopausal HR+ and HER2– Metastatic Breast Cancer by Circulating Tumor DNA and Association of Genetic Alterations With Therapeutic Response to Endocrine Therapy and Ribociclib
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Bardia, Aditya, Su, Fei, Solovieff, Nadia, Im, Seock-Ah, Sohn, Joohyuk, Lee, Keun Seok, Campos-Gomez, Saul, Jung, Kyung Hae, Colleoni, Marco, Vázquez, Rafael Villanueva, Franke, Fabio, Hurvitz, Sara, Harbeck, Nadia, Chow, Louis, Taran, Tetiana, Lorenc, Karen Rodriguez, Babbar, Naveen, Tripathy, Debu, and Lu, Yen-Shen
- Subjects
Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Genetics ,Clinical Trials and Supportive Activities ,Cancer ,Breast Cancer ,Clinical Research ,Evaluation of treatments and therapeutic interventions ,6.1 Pharmaceuticals ,Adolescent ,Adult ,Aminopyridines ,Antineoplastic Agents ,Hormonal ,Antineoplastic Combined Chemotherapy Protocols ,Biomarkers ,Tumor ,Breast Neoplasms ,Circulating Tumor DNA ,Double-Blind Method ,Drug Resistance ,Neoplasm ,Female ,Genomics ,Humans ,Middle Aged ,Premenopause ,Progression-Free Survival ,Proportional Hazards Models ,Purines ,Receptor ,ErbB-2 ,Transcription Factors ,Young Adult ,Receptor ,erbB-2 ,Oncology and carcinogenesis - Abstract
PurposeThis analysis evaluated the genomic landscape of premenopausal patients with hormone receptor-positive and human epidermal growth factor receptor 2-negative advanced breast cancer and the association of genetic alterations with response to ribociclib in the phase III MONALEESA-7 trial.MethodsPremenopausal patients were randomly assigned 1:1 to receive endocrine therapy plus ribociclib or placebo. Plasma collected at baseline was sequenced using targeted next-generation sequencing for approximately 600 relevant cancer genes. The association of circulating tumor DNA alterations with progression-free survival (PFS) was evaluated to identify biomarkers of response and resistance to ribociclib.ResultsBaseline circulating tumor DNA was sequenced in 565 patients; 489 had evidence of ≥ 1 alteration. The most frequent alterations included PIK3CA (28%), TP53 (19%), CCND1 (10%), MYC (8%), GATA3 (8%), receptor tyrosine kinases (17%), and the Chr8p11.23 locus (12%). A treatment benefit of ribociclib was seen with wild-type (hazard ratio [HR] 0.45 [95% CI, 0.33 to 0.62]) and altered (HR 0.57 [95% CI, 0.36 to 0.9]) PIK3CA. Overall, patients with altered CCND1 had shorter PFS regardless of treatment, suggesting CCND1 as a potential prognostic biomarker. Benefit with ribociclib was seen in patients with altered (HR 0.21 [95% CI, 0.08 to 0.54]) or wild-type (HR 0.52 [95% CI, 0.39 to 0.68]) CCND1, but greater benefit was observed with altered, suggesting predictive potential of CCND1. Alterations in TP53, MYC, Chr8p11.23 locus, and receptor tyrosine kinases were associated with worse PFS, but ribociclib benefit was independent of alteration status.ConclusionIn this study-to our knowledge, the first large study of premenopausal patients with hormone receptor-positive and human epidermal growth factor receptor 2-negative advanced breast cancer-multiple genomic alterations were associated with poor outcome. A PFS benefit of ribociclib was observed regardless of gene alteration status, although in this exploratory analysis, a magnitude of benefits varied by alteration.
- Published
- 2021
33. Neoadjuvant T-DM1/pertuzumab and paclitaxel/trastuzumab/pertuzumab for HER2+ breast cancer in the adaptively randomized I-SPY2 trial.
- Author
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Clark, Amy S, Yau, Christina, Wolf, Denise M, Petricoin, Emanuel F, van 't Veer, Laura J, Yee, Douglas, Moulder, Stacy L, Wallace, Anne M, Chien, A Jo, Isaacs, Claudine, Boughey, Judy C, Albain, Kathy S, Kemmer, Kathleen, Haley, Barbara B, Han, Hyo S, Forero-Torres, Andres, Elias, Anthony, Lang, Julie E, Ellis, Erin D, Yung, Rachel, Tripathy, Debu, Nanda, Rita, Wulfkuhle, Julia D, Brown-Swigart, Lamorna, Gallagher, Rosa I, Helsten, Teresa, Roesch, Erin, Ewing, Cheryl A, Alvarado, Michael, Crane, Erin P, Buxton, Meredith, Clennell, Julia L, Paoloni, Melissa, Asare, Smita M, Wilson, Amy, Hirst, Gillian L, Singhrao, Ruby, Steeg, Katherine, Asare, Adam, Matthews, Jeffrey B, Berry, Scott, Sanil, Ashish, Melisko, Michelle, Perlmutter, Jane, Rugo, Hope S, Schwab, Richard B, Symmans, W Fraser, Hylton, Nola M, Berry, Donald A, Esserman, Laura J, and DeMichele, Angela M
- Subjects
Humans ,Breast Neoplasms ,Paclitaxel ,Maytansine ,Receptor ,erbB-2 ,Neoadjuvant Therapy ,Adult ,Aged ,Middle Aged ,Antibodies ,Monoclonal ,Humanized ,Biomarkers ,Tumor ,Trastuzumab ,Ado-Trastuzumab Emtansine ,Receptor ,ErbB-2 ,Clinical Trials and Supportive Activities ,Clinical Research ,Breast Cancer ,Cancer ,Evaluation of treatments and therapeutic interventions ,6.1 Pharmaceuticals - Abstract
HER2-targeted therapy dramatically improves outcomes in early breast cancer. Here we report the results of two HER2-targeted combinations in the neoadjuvant I-SPY2 phase 2 adaptive platform trial for early breast cancer at high risk of recurrence: ado-trastuzumab emtansine plus pertuzumab (T-DM1/P) and paclitaxel, trastuzumab and pertuzumab (THP). Eligible women have >2.5 cm clinical stage II/III HER2+ breast cancer, adaptively randomized to T-DM1/P, THP, or a common control arm of paclitaxel/trastuzumab (TH), followed by doxorubicin/cyclophosphamide, then surgery. Both T-DM1/P and THP arms 'graduate' in all subtypes: predicted pCR rates are 63%, 72% and 33% for T-DM1/P (n = 52), THP (n = 45) and TH (n = 31) respectively. Toxicity burden is similar between arms. Degree of HER2 pathway signaling and phosphorylation in pretreatment biopsy specimens are associated with response to both T-DM1/P and THP and can further identify highly responsive HER2+ tumors to HER2-directed therapy. This may help identify patients who can safely de-escalate cytotoxic chemotherapy without compromising excellent outcome.
- Published
- 2021
34. Ganitumab and metformin plus standard neoadjuvant therapy in stage 2/3 breast cancer.
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Yee, Douglas, Isaacs, Claudine, Wolf, Denise M, Yau, Christina, Haluska, Paul, Giridhar, Karthik V, Forero-Torres, Andres, Jo Chien, A, Wallace, Anne M, Pusztai, Lajos, Albain, Kathy S, Ellis, Erin D, Beckwith, Heather, Haley, Barbara B, Elias, Anthony D, Boughey, Judy C, Kemmer, Kathleen, Yung, Rachel L, Pohlmann, Paula R, Tripathy, Debu, Clark, Amy S, Han, Hyo S, Nanda, Rita, Khan, Qamar J, Edmiston, Kristen K, Petricoin, Emanuel F, Stringer-Reasor, Erica, Falkson, Carla I, Majure, Melanie, Mukhtar, Rita A, Helsten, Teresa L, Moulder, Stacy L, Robinson, Patricia A, Wulfkuhle, Julia D, Brown-Swigart, Lamorna, Buxton, Meredith, Clennell, Julia L, Paoloni, Melissa, Sanil, Ashish, Berry, Scott, Asare, Smita M, Wilson, Amy, Hirst, Gillian L, Singhrao, Ruby, Asare, Adam L, Matthews, Jeffrey B, Hylton, Nola M, DeMichele, Angela, Melisko, Michelle, Perlmutter, Jane, Rugo, Hope S, Fraser Symmans, W, Van't Veer, Laura J, Berry, Donald A, and Esserman, Laura J
- Subjects
Diabetes ,Cancer ,Breast Cancer ,6.1 Pharmaceuticals - Abstract
I-SPY2 is an adaptively randomized phase 2 clinical trial evaluating novel agents in combination with standard-of-care paclitaxel followed by doxorubicin and cyclophosphamide in the neoadjuvant treatment of breast cancer. Ganitumab is a monoclonal antibody designed to bind and inhibit function of the type I insulin-like growth factor receptor (IGF-1R). Ganitumab was tested in combination with metformin and paclitaxel (PGM) followed by AC compared to standard-of-care alone. While pathologic complete response (pCR) rates were numerically higher in the PGM treatment arm for hormone receptor-negative, HER2-negative breast cancer (32% versus 21%), this small increase did not meet I-SPY's prespecified threshold for graduation. PGM was associated with increased hyperglycemia and elevated hemoglobin A1c (HbA1c), despite the use of metformin in combination with ganitumab. We evaluated several putative predictive biomarkers of ganitumab response (e.g., IGF-1 ligand score, IGF-1R signature, IGFBP5 expression, baseline HbA1c). None were specific predictors of response to PGM, although several signatures were associated with pCR in both arms. Any further development of anti-IGF-1R therapy will require better control of anti-IGF-1R drug-induced hyperglycemia and the development of more predictive biomarkers.
- Published
- 2021
35. Other Primary Malignancies in Patients with Breast Cancer Who Undergo Germline Panel Testing
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Murphy, Brittany L., Yi, Min, Gutierrez Barrera, Angelica M., Tripathy, Debu, Hunt, Kelly K., and Arun, Banu K.
- Published
- 2023
- Full Text
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36. Quality of life of COVID-19 recovered patients: a 1-year follow-up study from Bangladesh
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Mohammad Delwer Hossain Hawlader, Md Utba Rashid, Md Abdullah Saeed Khan, Mowshomi Mannan Liza, Sharmin Akter, Mohammad Ali Hossain, Tajrin Rahman, Sabrina Yesmin Barsha, Alberi Afifa Shifat, Mosharop Hossian, Tahmina Zerin Mishu, Soumik Kha Sagar, Ridwana Maher Manna, Nawshin Ahmed, Sree Shib Shankar Devnath Debu, Irin Chowdhury, Samanta Sabed, Mashrur Ahmed, Sabrina Afroz Borsha, Faraz Al Zafar, Sabiha Hyder, Abdullah Enam, Habiba Babul, Naima Nur, Miah Md. Akiful Haque, Shopnil Roy, K. M. Tanvir Hassan, Mohammad Lutfor Rahman, Mohammad Hayatun Nabi, and Koustuv Dalal
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Quality of life ,Health-related quality of life ,Reverse transcription-polymerase chain reaction ,COVID-19 ,Bangladesh ,Infectious and parasitic diseases ,RC109-216 ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background The COVID-19 pandemic posed a danger to global public health because of the unprecedented physical, mental, social, and environmental impact affecting quality of life (QoL). The study aimed to find the changes in QoL among COVID-19 recovered individuals and explore the determinants of change more than 1 year after recovery in low-resource settings. Methods COVID-19 patients from all eight divisions of Bangladesh who were confirmed positive by reverse transcription-polymerase chain reaction from June 2020 to November 2020 and who subsequently recovered were followed up twice, once immediately after recovery and again 1 year after the first follow-up. The follow-up study was conducted from November 2021 to January 2022 among 2438 individuals using the World Health Organization Quality of Life Brief Version (WHOQOL-BREF). After excluding 48 deaths, 95 were rejected to participate, 618 were inaccessible, and there were 45 cases of incomplete data. Descriptive statistics, paired-sample analyses, generalized estimating equation (GEE) analysis, and multivariable logistic regression analyses were performed to test the mean difference in participants’ QoL scores between the two interviews. Results Most participants (n = 1710, 70.1%) were male, and one-fourth (24.4%) were older than 46. The average physical domain score decreased significantly from baseline to follow-up, and the average scores in psychological, social, and environmental domains increased significantly at follow-up (P
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- 2023
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37. Epigenetically upregulating TROP2 and SLFN11 enhances therapeutic efficacy of TROP2 antibody drug conjugate sacitizumab govitecan
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Ming Zhao, Timothy P. DiPeri, Maria Gabriela Raso, Xiaofeng Zheng, Yasmeen Qamar Rizvi, Kurt W. Evans, Fei Yang, Argun Akcakanat, Marco Roberto Estecio, Debu Tripathy, Ecaterina E. Dumbrava, Senthil Damodaran, and Funda Meric-Bernstam
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract TROP2 antibody drug conjugates (ADCs) are under active development. We seek to determine whether we can enhance activity of TROP2 ADCs by increasing TROP2 expression. In metaplastic breast cancers (MpBC), there is limited expression of TROP2, and downregulating transcription factor ZEB1 upregulates E-cad and TROP2, thus sensitizing cancers to TROP2 ADC sacituzumab govitecan (SG). Demethylating agent decitabine decreases DNA methyltransferase expression and TROP2 promoter methylation and subsequently increases TROP2 expression. Decitabine treatment as well as overexpression of TROP2 significantly enhance SG antitumor activity. Decitabine also increases SLFN11, a biomarker of topoisomerase 1 inhibitor (TOP1) sensitivity and is synergistic with SG which has a TOP1 payload, in TROP2-expressing SLFN11-low BC cells. In conclusion, TROP2 and SLFN11 expression can be epigenetically modulated and the combination of demethylating agent decitabine with TROP2 ADCs may represent a novel therapeutic approach for tumors with low TROP2 or SLFN11 expression.
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- 2023
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38. Positron production using a 9 MeV electron linac for the GBAR experiment
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Charlton, M., Choi, J. J., Chung, M., Clade, P., Comini, P., Crepin, P-P., Crivelli, P., Dalkarov, O., Debu, P., Dodd, L., Douillet, A., Guellati-Khelifa, S., Hervieux, P-A., Hilico, L., Husson, A., Indelicato, P., Janka, G., Jonsell, S., Karr, J-P., Kim, B. H., Kim, E-S., Kim, S. K., Ko, Y., Kosinski, T., Kuroda, N., Latacz, B., Lee, H., Lee, J., Leite, A. M. M., Leveque, K., Lim, E., Liszkay, L., Lotrus, P., Louvradoux, T., Lunney, D., Manfredi, G., Mansoulie, B., Matusiak, M., Mornacchi, G., Nesvizhevsky, V. V., Nez, F., Niang, S., Nishi, R., Nourbaksh, S., Park, K. H., Paul, N., Perez, P., Procureur, S., Radics, B., Regenfus, C., Rey, J-M., Reymond, J-M., Reynaud, S., Rousse, J-Y., Rousselle, O., Rubbia, A., Rzadkiewicz, J., Sacquin, Y., Schmidt-Kaler, F., Staszczak, M., Tuchming, B., Vallage, B., Voronin, A., Welker, A., van der Werf, D. P., Wolf, S., Won, D., Wronka, S., Yamazaki, Y., and Yoo, K-H.
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Physics - Instrumentation and Detectors - Abstract
For the GBAR (Gravitational Behaviour of Antihydrogen at Rest) experiment at CERN's Antiproton Decelerator (AD) facility we have constructed a source of slow positrons, which uses a low-energy electron linear accelerator (linac). The driver linac produces electrons of 9 MeV kinetic energy that create positrons from bremsstrahlung-induced pair production. Staying below 10 MeV ensures no persistent radioactive activation in the target zone and that the radiation level outside the biological shield is safe for public access. An annealed tungsten-mesh assembly placed directly behind the target acts as a positron moderator. The system produces $5\times10^7$ slow positrons per second, a performance demonstrating that a low-energy electron linac is a superior choice over positron-emitting radioactive sources for high positron flux., Comment: published in NIM A. 33 pages 9 figures
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- 2020
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39. Publisher Erratum: Production of antihydrogen atoms by 6 keV antiprotons through a positronium cloud
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Adrich, P., Blumer, P., Caratsch, G., Chung, M., Cladé, P., Comini, P., Crivelli, P., Dalkarov, O., Debu, P., Douillet, A., Drapier, D., Froelich, P., Garroum, N., Guellati-Khelifa, S., Guyomard, J., Hervieux, P.-A., Hilico, L., Indelicato, P., Jonsell, S., Karr, J.-P., Kim, B., Kim, S., Kim, E.-S., Ko, Y. J., Kosinski, T., Kuroda, N., Latacz, B. M., Lee, B., Lee, H., Lee, J., Lim, E., Liszkay, L., Lunney, D., Manfredi, G., Mansoulié, B., Matusiak, M., Nesvizhevsky, V., Nez, F., Niang, S., Ohayon, B., Park, K., Paul, N., Pérez, P., Regenfus, C., Reynaud, S., Roumegou, C., Roussé, J.-Y., Sacquin, Y., Sadowski, G., Sarkisyan, J., Sato, M., Schmidt-Kaler, F., Staszczak, M., Szymczyk, K., Tanaka, T. A., Tuchming, B., Vallage, B., Voronin, A., van der Werf, D. P., Welker, A., Won, D., Wronka, S., Yamazaki, Y., Yoo, K.-H., and Yzombard, P.
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- 2023
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40. Circulating tumor DNA and magnetic resonance imaging to predict neoadjuvant chemotherapy response and recurrence risk.
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Magbanua, Mark Jesus M, Li, Wen, Wolf, Denise M, Yau, Christina, Hirst, Gillian L, Swigart, Lamorna Brown, Newitt, David C, Gibbs, Jessica, Delson, Amy L, Kalashnikova, Ekaterina, Aleshin, Alexey, Zimmermann, Bernhard, Chien, A Jo, Tripathy, Debu, Esserman, Laura, Hylton, Nola, and van 't Veer, Laura
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We investigated whether serial measurements of circulating tumor DNA (ctDNA) and functional tumor volume (FTV) by magnetic resonance imaging (MRI) can be combined to improve prediction of pathologic complete response (pCR) and estimation of recurrence risk in early breast cancer patients treated with neoadjuvant chemotherapy (NAC). We examined correlations between ctDNA and FTV, evaluated the additive value of ctDNA to FTV-based predictors of pCR using area under the curve (AUC) analysis, and analyzed the impact of FTV and ctDNA on distant recurrence-free survival (DRFS) using Cox regressions. The levels of ctDNA (mean tumor molecules/mL plasma) were significantly correlated with FTV at all time points (p
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- 2021
41. A detailed description of the distress trajectory from pre- to post-treatment in breast cancer patients receiving neoadjuvant chemotherapy
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Lacourt, Tamara E., Koncz, Zsuzsa, Tullos, Emily A., and Tripathy, Debu
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- 2023
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42. Modeling of Waiting Time to First Employment of Graduates at Wolkite University, Ethiopia: Application of Accelerated Failure Time Models
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Adelo Wobse, Belete, Haile Menuta, Yohannes, and Debu Liga, Abebe
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In Sub-Saharan African countries like Ethiopia, the waiting time for graduates before having their first job is very high. This study aimed at predicting the waiting time to get their first job and the effects of the associated factors. A retrospective study was conducted based on the 2021 graduate tracer survey data at Wolkite University. By considering the complete information on the total of 2069 graduates, the accelerated failure time model was used to identify the different factors. The median waiting time to first employment for the graduates was 17 months. The Weibull accelerated failure time model was the most efficient model to examine the waiting time among other survival models. It revealed that graduates from all colleges had shorter waiting times when compared to colleges of agriculture and natural resource. Graduates who scored lower have been waiting longer to get their first employment when compared to the high scorer. Graduates who were from Amhara, Oromia, Tigray, and other regions have been waiting for about 1.30, 1.18, 1.93, and 1.38 times longer, respectively, compared to those who were from Addis Ababa. Also, graduates who search for a job through relations and others had shorter waiting times when compared to those searching through public advertisements. College of graduates, CGPA, region, ways of searching for a job, and numbers of applications were statistically significant factors identified. So considering these factors is vital to produce labor market-oriented professionals hired within a short time.
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- 2022
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43. Longitudinal dynamic contrast-enhanced MRI radiomic models for early prediction of response to neoadjuvant systemic therapy in triple-negative breast cancer
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Bikash Panthi, Rania M. Mohamed, Beatriz E. Adrada, Medine Boge, Rosalind P. Candelaria, Huiqin Chen, Kelly K. Hunt, Lei Huo, Ken-Pin Hwang, Anil Korkut, Deanna L. Lane, Huong C. Le-Petross, Jessica W. T. Leung, Jennifer K. Litton, Sanaz Pashapoor, Frances Perez, Jong Bum Son, Jia Sun, Alastair Thompson, Debu Tripathy, Vicente Valero, Peng Wei, Jason White, Zhan Xu, Wei Yang, Zijian Zhou, Clinton Yam, Gaiane M. Rauch, and Jingfei Ma
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triple-negative breast cancer ,dynamic contrast-enhanced MRI ,neoadjuvant systemic therapy ,radiomic analysis ,pathologic complete response ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Early prediction of neoadjuvant systemic therapy (NAST) response for triple-negative breast cancer (TNBC) patients could help oncologists select individualized treatment and avoid toxic effects associated with ineffective therapy in patients unlikely to achieve pathologic complete response (pCR). The objective of this study is to evaluate the performance of radiomic features of the peritumoral and tumoral regions from dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) acquired at different time points of NAST for early treatment response prediction in TNBC. This study included 163 Stage I-III patients with TNBC undergoing NAST as part of a prospective clinical trial (NCT02276443). Peritumoral and tumoral regions of interest were segmented on DCE images at baseline (BL) and after two (C2) and four (C4) cycles of NAST. Ten first-order (FO) radiomic features and 300 gray-level-co-occurrence matrix (GLCM) features were calculated. Area under the receiver operating characteristic curve (AUC) and Wilcoxon rank sum test were used to determine the most predictive features. Multivariate logistic regression models were used for performance assessment. Pearson correlation was used to assess intrareader and interreader variability. Seventy-eight patients (48%) had pCR (52 training, 26 testing), and 85 (52%) had non-pCR (57 training, 28 testing). Forty-six radiomic features had AUC at least 0.70, and 13 multivariate models had AUC at least 0.75 for training and testing sets. The Pearson correlation showed significant correlation between readers. In conclusion, Radiomic features from DCE-MRI are useful for differentiating pCR and non-pCR. Similarly, predictive radiomic models based on these features can improve early noninvasive treatment response prediction in TNBC patients undergoing NAST.
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- 2023
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44. De Novo Versus Recurrent HER2‐Positive Metastatic Breast Cancer: Patient Characteristics, Treatment, and Survival from the SystHERs Registry
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Tripathy, Debu, Brufsky, Adam, Cobleigh, Melody, Jahanzeb, Mohammad, Kaufman, Peter A, Mason, Ginny, O'Shaughnessy, Joyce, Rugo, Hope S, Swain, Sandra M, Yardley, Denise A, Chu, Laura, Li, Haocheng, Antao, Vincent, and Hurvitz, Sara A
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Breast Cancer ,Cancer ,Clinical Trials and Supportive Activities ,Clinical Research ,Adolescent ,Adult ,Antineoplastic Combined Chemotherapy Protocols ,Breast Neoplasms ,Female ,Humans ,Neoplasm Metastasis ,Neoplasm Recurrence ,Local ,Receptor ,ErbB-2 ,Registries ,Trastuzumab ,Treatment Outcome ,HER2-positive metastatic breast cancer ,De novo ,Recurrent ,Registry ,SystHERs ,HER2‐positive metastatic breast cancer ,Oncology and Carcinogenesis ,Oncology & Carcinogenesis - Abstract
BACKGROUND:Limited data exist describing real-world treatment of de novo and recurrent HER2-positive metastatic breast cancer (MBC). MATERIALS AND METHODS:The Systemic Therapies for HER2-Positive Metastatic Breast Cancer Study (SystHERs) was a fully enrolled (2012-2016), observational, prospective registry of patients with HER2-positive MBC. Patients aged ≥18 years and ≤6 months from HER2-positive MBC diagnosis were treated and assessed per their physician's standard practice. The primary endpoint was to characterize treatment patterns by de novo versus recurrent MBC status, compared descriptively. Secondary endpoints included patient characteristics, progression-free and overall survival (PFS and OS, by Kaplan-Meier method; hazard ratio [HR] and 95% confidence interval [CI] by Cox regression), and patient-reported outcomes. RESULTS:Among 977 eligible patients, 49.8% (n = 487) had de novo and 50.2% (n = 490) had recurrent disease. A higher proportion of de novo patients had hormone receptor-negative disease (34.9% vs. 24.9%), bone metastasis (57.1% vs. 45.9%), and/or liver metastasis (41.9% vs. 33.1%), and a lower proportion had central nervous system metastasis (4.3% vs. 13.5%). De novo patients received first-line regimens containing chemotherapy (89.7%), trastuzumab (95.7%), and pertuzumab (77.8%) more commonly than recurrent patients (80.0%, 85.9%, and 68.6%, respectively). De novo patients had longer median PFS (17.7 vs. 11.9 months; HR, 0.69; 95% CI, 0.59-0.80; p < .0001) and OS (not estimable vs. 44.5 months; HR, 0.55; 95% CI, 0.44-0.69; p < .0001). CONCLUSION:Patients with de novo versus recurrent HER2-positive MBC exhibit different disease characteristics and survival durations, suggesting these groups have distinct outcomes. These differences may affect future clinical trial design. Clinical trial identification number. NCT01615068 (clinicaltrials.gov). IMPLICATIONS FOR PRACTICE:SystHERs was an observational registry of patients with HER2-positive metastatic breast cancer (MBC), which is a large, modern, real-world data set for this population and, thereby, provides a unique opportunity to study patients with de novo and recurrent HER2-positive MBC. In SystHERs, patients with de novo disease had different baseline demographics and disease characteristics, had superior clinical outcomes, and more commonly received first-line chemotherapy and/or trastuzumab versus those with recurrent disease. Data from this and other studies suggest that de novo and recurrent MBC have distinct outcomes, which may have implications for disease management strategies and future clinical study design.
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- 2020
45. Mechanism of action biomarkers predicting response to AKT inhibition in the I-SPY 2 breast cancer trial.
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Wolf, Denise M, Yau, Christina, Wulfkuhle, Julia, Brown-Swigart, Lamorna, Gallagher, Rosa I, Magbanua, Mark Jesus M, O'Grady, Nick, Hirst, Gillian, I-SPY 2 TRIAL Investigators, Asare, Smita, Tripathy, Debu, Berry, Don, Esserman, Laura, Chien, A Jo, Petricoin, Emanuel F, and van 't Veer, Laura
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I-SPY 2 TRIAL Investigators ,Breast cancer ,Predictive markers ,Breast Cancer ,Cancer ,Genetics ,Detection ,screening and diagnosis ,4.2 Evaluation of markers and technologies - Abstract
The AKT inhibitor MK2206 (M) was evaluated in I-SPY 2 and graduated in the HER2+, HR-, and HR- HER2+ signatures. We hypothesized that AKT signaling axis proteins/genes may specifically predict response to M and tested 26 phospho-proteins and 10 genes involved in AKT-mTOR-HER signaling; in addition, we tested 9 genes from a previous study in the metastatic setting. One hundred and fifty patients had gene expression data from pretreatment biopsies available for analysis (M: 94, control: 56) and 138 had protein data (M: 87, control: 51). Logistic modeling was used to assess biomarker performance in pre-specified analysis. In general, phospho-protein biomarkers of activity in the AKT-mTOR-HER pathway appeared more predictive of response to M than gene expression or total protein biomarkers in the same pathway; however, the nature of the predictive biomarkers differed in the HER2+ and TN groups. In the HER2+ subset, patients achieving a pCR in M had higher levels of multiple AKT kinase substrate phospho-proteins (e.g., pmTOR, pTSC2). In contrast, in the TN subset responding patients had lower levels of AKT pathway phospho-proteins, such as pAKT, pmTOR, and pTSC2. Pathway mutations did not appear to account for these associations. Additional exploratory whole-transcriptome analysis revealed immune signaling as strongly associated with response to M in the HER2+ subset. While our sample size is small, these results suggest that the measurement of particular AKT kinase substrate phospho-proteins could be predictive of MK2206 efficacy in both HER2+ and TN tumors and that immune signaling may play a role in response in HER2+ patients.
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- 2020
46. Prediction of pathologic complete response to neoadjuvant systemic therapy in triple negative breast cancer using deep learning on multiparametric MRI
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Zijian Zhou, Beatriz E. Adrada, Rosalind P. Candelaria, Nabil A. Elshafeey, Medine Boge, Rania M. Mohamed, Sanaz Pashapoor, Jia Sun, Zhan Xu, Bikash Panthi, Jong Bum Son, Mary S. Guirguis, Miral M. Patel, Gary J. Whitman, Tanya W. Moseley, Marion E. Scoggins, Jason B. White, Jennifer K. Litton, Vicente Valero, Kelly K. Hunt, Debu Tripathy, Wei Yang, Peng Wei, Clinton Yam, Mark D. Pagel, Gaiane M. Rauch, and Jingfei Ma
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Medicine ,Science - Abstract
Abstract Triple-negative breast cancer (TNBC) is an aggressive subtype of breast cancer. Neoadjuvant systemic therapy (NAST) followed by surgery are currently standard of care for TNBC with 50-60% of patients achieving pathologic complete response (pCR). We investigated ability of deep learning (DL) on dynamic contrast enhanced (DCE) MRI and diffusion weighted imaging acquired early during NAST to predict TNBC patients’ pCR status in the breast. During the development phase using the images of 130 TNBC patients, the DL model achieved areas under the receiver operating characteristic curves (AUCs) of 0.97 ± 0.04 and 0.82 ± 0.10 for the training and the validation, respectively. The model achieved an AUC of 0.86 ± 0.03 when evaluated in the independent testing group of 32 patients. In an additional prospective blinded testing group of 48 patients, the model achieved an AUC of 0.83 ± 0.02. These results demonstrated that DL based on multiparametric MRI can potentially differentiate TNBC patients with pCR or non-pCR in the breast early during NAST.
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- 2023
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47. Histology-based survival outcomes in hormone receptor-positive metastatic breast cancer treated with targeted therapies
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Jason A. Mouabbi, Akshara Singareeka Raghavendra, Roland L. Bassett, Amy Hassan, Debu Tripathy, and Rachel M. Layman
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract The addition of targeted therapies (TT) to endocrine therapy (ET) has improved the outcomes of patients with HR-positive, HER2-negative metastatic breast cancer (mBC). However, it is unknown whether patients with invasive lobular carcinoma (ILC) or mixed invasive ductal and lobular carcinoma (mixed) histologies experience the same magnitude of benefit from this therapy as those with invasive ductal carcinoma (IDC). We aim to determine whether patients with IDC, ILC, and mixed HR+/HER2− mBC derive similar benefit from the addition of cyclin-dependent kinase 4 and 6 inhibitors (CDK4/6is), mammalian target of rapamycin inhibitor (mTORi), and phosphoinositide 3-kinase inhibitor (PI3Ki) to ET in HR+/HER2− mBC. We conducted an observational, population-based investigation using data from the MD Anderson prospectively collected database. We conducted a histology-based analysis of progression-free survival (PFS) and overall survival (OS) durations in 3784 patients with HR+/HER2− mBC who were treated with TT plus ET between January 1, 2010, and December 31, 2021. Out of the 3784 patients, 2975 were included in the final analysis. Of these, 2249 received CDK4/6is (81% IDC, 15% ILC, and 4% mixed), 1027 received everolimus (82% IDC, 14% ILC, and 4% mixed) and 49 received alpelisib (81% IDC and 19% ILC). The addition of targeted therapy to ET did not result in statistically significant differences in PFS or OS duration among patients with IDC, ILC, and mixed HR+/HER2− mBC. We concluded that for patients with HR+/HER2− mBC, the addition of TT to ET leads to a similar magnitude of benefit, irrespective of histology.
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- 2022
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48. Fluctuations in Parkinson’s disease and personalized medicine: bridging the gap with the neuropsychiatric fluctuation scale
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Emmanuelle Schmitt, Bettina Debu, Anna Castrioto, Andrea Kistner, Valerie Fraix, Martine Bouvard, and Elena Moro
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psychometric characteristics ,scale ,validation ,Parkinson‘s disease ,neuropsychiatric fluctuations ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
BackgroundNeuropsychiatric fluctuations (NpsyF) are frequent and disabling in people with Parkinson’s disease (PD). In OFF-medication, NpsyF entail minus neuropsychiatric symptoms (NPS) like anxiety, apathy, sadness, and fatigue. In ON-medication, NpsyF consist in plus NPS, such as high mood, hypomania, and hyperactivity. Accurate identification of these NpsyF is essential to optimize the overall PD management. Due to lack of punctual scales, the neuropsychiatric fluctuation scale (NFS) has been recently designed to assess NpsyF in real time. The NFS comprises 20 items with two subscores for plus and minus NPS, and a total score.ObjectiveTo evaluate the psychometric properties of the NFS in PD.MethodsPD patients with motor fluctuations and healthy controls (HC) were assessed. In PD patients, the NFS was administrated in both the ON-and OFF-medication conditions, together with the movement disorders society-unified Parkinson disease rating scale parts I–IV. Depression (Beck depression scale II), apathy (Starkstein apathy scale) and non-motor fluctuations items of the Ardouin scale of behaviour in PD (ASBPD OFF and ON items) were also assessed. NFS internal structure was evaluated with principal component analysis consistency (PCA) in both medication conditions in PD patients and before emotional induction in HC. NFS internal consistency was assessed using Cronbach’s alpha coefficient. NFS convergent and divergent validity was measured through correlations with BDI-II, Starktein, and ASBPD OFF and ON non motor items. Specificity was assessed comparing NFS global score between the HC and PD populations. Sensitivity was evaluated with t-student test comparing the ON-and the OFF-medication conditions for NFS global score and for minus and plus subscores.ResultsIn total, 101 consecutive PD patients and 181 HC were included. In PD patients and HC, PCA highlighted one component that explained 32–35 and 42% of the variance, respectively. Internal consistency was good for both the NFS-plus (alpha =0.88) and NFS-minus items (alpha =0.8). The NFS showed a good specifity for PD (p < 0.0001) and a good sensitivity to the medication condition (p < 0.0001).ConclusionThe satisfactory properties of the NFS support its use to assess acute neuropsychiatric fluctuations in PD patients, adding to available tools.
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- 2023
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49. PTEN in triple-negative breast carcinoma: protein expression and genomic alteration in pretreatment and posttreatment specimens
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Hui Chen, Qingqing Ding, Laila Khazai, Li Zhao, Senthil Damodaran, Jennifer K. Litton, Gaiane M. Rauch, Clinton Yam, Jeffrey T. Chang, Sahil Seth, Bora Lim, Alastair M. Thompson, Elizabeth A. Mittendorf, Beatriz Adrada, Kiran Virani, Jason B. White, Elizabeth Ravenberg, Xingzhi Song, Rosalind Candelaria, Banu Arun, Naoto T. Ueno, Lumarie Santiago, Sadia Saleem, Sausan Abouharb, Rashmi K. Murthy, Nuhad Ibrahim, Mark J. Routbort, Aysegul Sahin, Vicente Valero, William Fraser Symmans, Debu Tripathy, Wei-Lien Wang, Stacy Moulder, and Lei Huo
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background: Recent advances have been made in targeting the phosphoinositide 3-kinase pathway in breast cancer. Phosphatase and tensin homolog (PTEN) is a key component of that pathway. Objective: To understand the changes in PTEN expression over the course of the disease in patients with triple-negative breast cancer (TNBC) and whether PTEN copy number variation (CNV) by next-generation sequencing (NGS) can serve as an alternative to immunohistochemistry (IHC) to identify PTEN loss. Methods: We compared PTEN expression by IHC between pretreatment tumors and residual tumors in the breast and lymph nodes after neoadjuvant chemotherapy in 96 patients enrolled in a TNBC clinical trial. A correlative analysis between PTEN protein expression and PTEN CNV by NGS was also performed. Results: With a stringent cutoff for PTEN IHC scoring, PTEN expression was discordant between pretreatment and posttreatment primary tumors in 5% of patients ( n = 96) and between posttreatment primary tumors and lymph node metastases in 9% ( n = 33). A less stringent cutoff yielded similar discordance rates. Intratumoral heterogeneity for PTEN loss was observed in 7% of the patients. Among pretreatment tumors, PTEN copy numbers by whole exome sequencing ( n = 72) were significantly higher in the PTEN-positive tumors by IHC compared with the IHC PTEN-loss tumors ( p
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- 2023
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50. Publisher Erratum: Production of antihydrogen atoms by 6 keV antiprotons through a positronium cloud
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P. Adrich, P. Blumer, G. Caratsch, M. Chung, P. Cladé, P. Comini, P. Crivelli, O. Dalkarov, P. Debu, A. Douillet, D. Drapier, P. Froelich, N. Garroum, S. Guellati-Khelifa, J. Guyomard, P.-A. Hervieux, L. Hilico, P. Indelicato, S. Jonsell, J.-P. Karr, B. Kim, S. Kim, E.-S. Kim, Y. J. Ko, T. Kosinski, N. Kuroda, B. M. Latacz, B. Lee, H. Lee, J. Lee, E. Lim, L. Liszkay, D. Lunney, G. Manfredi, B. Mansoulié, M. Matusiak, V. Nesvizhevsky, F. Nez, S. Niang, B. Ohayon, K. Park, N. Paul, P. Pérez, C. Regenfus, S. Reynaud, C. Roumegou, J.-Y. Roussé, Y. Sacquin, G. Sadowski, J. Sarkisyan, M. Sato, F. Schmidt-Kaler, M. Staszczak, K. Szymczyk, T. A. Tanaka, B. Tuchming, B. Vallage, A. Voronin, D. P. van der Werf, A. Welker, D. Won, S. Wronka, Y. Yamazaki, K.-H. Yoo, and P. Yzombard
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Astrophysics ,QB460-466 ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 - Published
- 2023
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