24 results on '"De Salas, Felipe"'
Search Results
2. Design of an improved universal signal peptide based on the α-factor mating secretion signal for enzyme production in yeast
- Author
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Aza, Pablo, Molpeceres, Gonzalo, de Salas, Felipe, and Camarero, Susana
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- 2021
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3. Fungal Enzymes for Saccharification of Gamma‐Valerolactone‐Pretreated White Birch Wood: Optimization of the Production of Talaromyces amestolkiae Cellulolytic Cocktail.
- Author
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de Eugenio, Laura I., de la Torre, Isabel, de Salas, Felipe, Vila, Francisco, Alonso, David, Prieto, Alicia, and Martínez, María Jesús
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FUNGAL enzymes ,CELLULOSIC ethanol ,ISOELECTRIC focusing ,NATURAL resources ,WOOD ,LIGNOCELLULOSE ,CELLULASE - Abstract
Lignocellulosic biomass, the most abundant natural resource on earth, can be used for cellulosic ethanol production but requires a pretreatment to improve enzyme access to the polymeric sugars while obtaining value from the other components. γ‐Valerolactone (GVL) is a promising candidate for biomass pretreatment since it is renewable and bio‐based. In the present work, the effect of a pretreatment based on GVL on the enzymatic saccharification of white birch was evaluated at a laboratory scale and the importance of the washing procedure for the subsequent saccharification was demonstrated. Both the saccharification yield and the production of cellulosic ethanol were higher using a noncommercial enzyme crude from Talaromyces amestolkiae than with the commercial cocktail Cellic CTec2 from Novozymes. Furthermore, the production of extracellular cellulases by T. amestolkiae has been optimized in 2 L bioreactors, with improvements ranging from 40% to 75%. Finally, it was corroborated by isoelectric focus that optimization of cellulase secretion by T. amestolkiae did not affect the pattern production of the main β‐glucosidases and endoglucanases secreted by this fungus. [ABSTRACT FROM AUTHOR]
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- 2024
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4. Structural and biochemical insights into an engineered high-redox potential laccase overproduced in Aspergillus
- Author
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de Salas, Felipe, Cañadas, Rubén, Santiago, Gerard, Virseda-Jerez, Alicia, Vind, Jesper, Gentili, Patrizia, Martínez, Angel T., Guallar, Víctor, Muñoz, Inés G., and Camarero, Susana
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- 2019
- Full Text
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5. Fungal Laccases as Biocatalysts for Wide Range Applications
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de Salas, Felipe, primary and Camarero, Susana, additional
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- 2021
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6. Depolymerisation of Kraft Lignin by Tailor-Made Alkaliphilic Fungal Laccases
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Rodríguez-Escribano, David, primary, de Salas, Felipe, additional, Pliego, Rocío, additional, Marques, Gisela, additional, Levée, Thomas, additional, Suonpää, Anu, additional, Gutiérrez, Ana, additional, Martínez, Ángel T., additional, Ihalainen, Petri, additional, Rencoret, Jorge, additional, and Camarero, Susana, additional
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- 2023
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7. Depolymerisation of Kraft Lignin by Tailor-Made Alkaliphilic Fungal Laccases
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Rodríguez-Escribano, David, de Salas, Felipe, Pliego, Rocío, Marques, Gisela, Levée, Thomas, Suonpää, Anu, Gutiérrez, Ana, Martínez, Ángel T., Ihalainen, Petri, Rencoret, Jorge, Camarero, Susana, Rodríguez-Escribano, David, de Salas, Felipe, Pliego, Rocío, Marques, Gisela, Levée, Thomas, Suonpää, Anu, Gutiérrez, Ana, Martínez, Ángel T., Ihalainen, Petri, Rencoret, Jorge, and Camarero, Susana
- Abstract
Lignins released in the black liquors of kraft pulp mills are an underutilised source of aromatics. Due to their phenol oxidase activity, laccases from ligninolytic fungi are suitable biocatalysts to depolymerise kraft lignins, which are characterised by their elevated phenolic content. However, the alkaline conditions necessary to solubilise kraft lignins make it difficult to use fungal laccases whose activity is inherently acidic. We recently developed through enzyme-directed evolution high-redox potential laccases active and stable at pH 10. Here, the ability of these tailor-made alkaliphilic fungal laccases to oxidise, demethylate, and depolymerise eucalyptus kraft lignin at pH 10 is evidenced by the increment in the content of phenolic hydroxyl and carbonyl groups, the methanol released, and the appearance of lower molecular weight moieties after laccase treatment. Nonetheless, in a second assay carried out with higher enzyme and lignin concentrations, these changes were accompanied by a strong increase in the molecular weight and content of β–O–4 and β–5 linkages of the main lignin fraction, indicating that repolymerisation of the oxidised products prevails in one-pot reactions. To prevent it, we finally conducted the enzymatic reaction in a bench-scale reactor coupled to a membrane separation system and were able to prove the depolymerisation of kraft lignin by high-redox alkaliphilic laccase.
- Published
- 2023
8. Diseño de un péptido señal mejorado para la producción de enzimas recombinantes en levadura
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Molpeceres, Gonzalo, Aza, Pablo, De Salas, Felipe, Camarero, Susana, Ministerio de Economía, Industria y Competitividad (España), European Commission, Molpeceres, Gonzalo, Aza, Pablo, De Salas, Felipe, Camarero, Susana, Molpeceres, Gonzalo [0000-0002-4366-9412], Aza, Pablo [0000-0002-8703-8399], De Salas, Felipe [0000-0002-0057-0180], and Camarero, Susana [0000-0002-2812-895X]
- Abstract
1 p., Saccharomyces cerevisiae desempeña un papel importante como sistema de expresión heteróloga de proteínas debido a su fácil manipulación, bajos requerimientos y capacidad para realizar las modificaciones postraduccionales en las proteínas. Una de las estrategias más utilizadas para incrementar la secreción es el uso de péptidos señal que determinan la vía de secreción.Históricamente, la secuencia pre-prolíder de la feromona factor α de S. cerevisiae ha jugado un papel importante en la producción de proteínas recombinantes. El uso de este péptido señal en combinación con la evolución dirigida de enzimas ha permitido conseguir la difícil expresión de lacasas fúngicas en S. cerevisiae, obteniendo diferentes secuencias señales evolucionadas.Sin embargo, el diseño de un péptido señal optimizado, de carácter universal, que incremente la producción de diversas enzimas es un desafío pendiente.En este estudio, se aplicaron dos estrategias paralelas de ingeniería del pre-prolíder del factor α para mejorar la producción de enzimas analizando el efecto de mutaciones acumuladas en dicha secuencia a lo largo de sucesivas rondas de evolución dirigida y sus posibles interacciones epistáticas. Ambos enfoques coincidieron en el efecto sinérgico de cuatro mutaciones contenidas en el péptido señal optimizado final, que mejoraron notablemente la secreción de varias oxidorreductasas e hidrolasas fúngicas. Además, se proporcionan directrices adicionales para mejorar aún más la producción heteróloga de una enzima en particular mediante la mutagénesis saturada combinatorial de dos posiciones del péptido señal fusionado a la proteína de interés. Los resultados obtenidos ofrecen un importante avance para la producción de biocatalizadores de interés industrial., Spanish project BIO2017-86559-R. WoodZymes project funded by the Bio Based Industries Joint Undertaking (JU) under grant agreement No 792070
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- 2021
9. A highly stable laccase obtained by swapping the second cupredoxin domain
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Pardo, Isabel, Rodríguez-Escribano, David, Aza, Pablo, de Salas, Felipe, Martínez, Angel T., and Camarero, Susana
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- 2018
- Full Text
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10. Fungal laccases as biocatalysts for wide range applications
- Author
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De Salas, Felipe, Camarero, Susana, De Salas, Felipe, Camarero, Susana, De Salas, Felipe [0000-0002-0057-0180], and Camarero, Susana [0000-0002-2812-895X]
- Subjects
Basidiomycetes ,Polyaniline ,White biotechnology ,Laccase ,Fungi ,Organic synthesis ,Heterologous expression ,Catalytic activity ,Polymerization - Abstract
32 p.-5 fig., Fungal laccases are multicopper oxidases with high catalytic versatility and low catalytic requirements (only O2 of the air is required for activation). Their high redox potential, especially of certain basidiomycete laccases, significantly increases their oxidation capacity compared to bacterial laccases. These characteristics together provide these enzymes with great potential for applications as biocatalysts in a range of synthetic or degrading reactions. We review here some of the main properties and biotechnological applications of fungal laccases, underlining their overexpression limitations for industrial scale application. We focus on the use of laccases as biocatalysts for organic synthesis, with special emphasis on polymer synthesis.
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- 2021
11. Protein Engineering Approaches to Enhance Fungal Laccase Production in S. cerevisiae
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Aza, Pablo, primary, de Salas, Felipe, additional, Molpeceres, Gonzalo, additional, Rodríguez-Escribano, David, additional, de la Fuente, Iñigo, additional, and Camarero, Susana, additional
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- 2021
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12. Engineering of a fungal laccase to develop a robust, versatile and highly-expressed biocatalyst for sustainable chemistry
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de Salas, Felipe, primary, Aza, Pablo, additional, Gilabert, Joan F., additional, Santiago, Gerard, additional, Kilic, Sibel, additional, Sener, Mehmet E., additional, Vind, Jesper, additional, Guallar, Víctor, additional, Martínez, Angel T., additional, and Camarero, Susana, additional
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- 2019
- Full Text
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13. Fungal Laccases as Biocatalysts for Wide Range Applications
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de Salas, Felipe and Camarero, Susana
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- 2017
- Full Text
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14. High-Throughput Screening Assay for Laccase Engineering toward Lignosulfonate Valorization
- Author
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Rodríguez-Escribano, David, primary, de Salas, Felipe, additional, Pardo, Isabel, additional, and Camarero, Susana, additional
- Published
- 2017
- Full Text
- View/download PDF
15. Computer-aided laccase engineering: toward biological oxidation of arylamines
- Author
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Barcelona Supercomputing Center, Santiago, Gerard, de Salas, Felipe, Lucas, Fatima, Monza, Emanuele, Acebes, Sandra, Martinez, Ángel T., Camarero, Susana, Barcelona Supercomputing Center, Santiago, Gerard, de Salas, Felipe, Lucas, Fatima, Monza, Emanuele, Acebes, Sandra, Martinez, Ángel T., and Camarero, Susana
- Abstract
Oxidation of arylamines, such as aniline, is of high industrial interest and laccases have been proposed as biocata-lysts to replace harsh chemical oxidants. However, the reaction is hampered by the redox potential of the substrate at acid pH and enzyme engineering is required to improve the oxidation. In this work, instead of trying to improve the redox potential of the en-zyme, we aim towards the (transient) substrate’s one and propose this as a more reliable strategy. We have successfully combined a computational approach with experimental validation to rationally design an improved biocatalyst. The in silico protocol combines classical and quantum mechanics to deliver atomic and electronic level detail on the two main processes involved: substrate binding and electron transfer. After mutant expression and comparison to the parent type, kinetic results show that the protocol accurately predicts aniline’s improved oxidation (2-fold kcat increase) in the engineered variant for biocatalyzed polyaniline production., This study was supported by the INDOX (KBBE-2013-7-613549) EU-project, and the NOESIS (BI0201456388-R) and OxiDesign (CTQ2013-48287-R) Spanish project. GS thanks an FPI grant of the Spanish Ministry of Competitiveness., Peer Reviewed, Postprint (author's final draft)
- Published
- 2016
16. Advanced Synthesis of Conductive Polyaniline Using Laccase as Biocatalyst
- Author
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de Salas, Felipe, primary, Pardo, Isabel, additional, Salavagione, Horacio J., additional, Aza, Pablo, additional, Amougi, Eleni, additional, Vind, Jesper, additional, Martínez, Angel T., additional, and Camarero, Susana, additional
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- 2016
- Full Text
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17. Computer-Aided Laccase Engineering: Toward Biological Oxidation of Arylamines
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Santiago, Gerard, primary, de Salas, Felipe, additional, Lucas, M. Fátima, additional, Monza, Emanuele, additional, Acebes, Sandra, additional, Martinez, Ángel T., additional, Camarero, Susana, additional, and Guallar, Víctor, additional
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- 2016
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18. Context-dependent effects of yolk androgens on nestling growth and immune function in a multibrooded passerine
- Author
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Muriel, Jaime, Salmon, Pablo, Nunez-Buiza, Ángel, De Salas, Felipe, Pérez-Rodríguez, Lorenzo, Puerta, Marisa, Gil, Diego, Muriel, Jaime, Salmon, Pablo, Nunez-Buiza, Ángel, De Salas, Felipe, Pérez-Rodríguez, Lorenzo, Puerta, Marisa, and Gil, Diego
- Abstract
Female birds may adjust their offspring phenotype to the specific requirements of the environment by differential allocation of physiologically active substances into yolks, such as androgens. Yolk androgens have been shown to accelerate embryonic development, growth rate and competitive ability of nestlings, but they can also entail immunological costs. The balance between costs and benefits of androgen allocation is expected to depend on nestling environment. We tested this hypothesis in a multibrooded passerine, the spotless starling, Sturnus unicolor. We experimentally manipulated yolk androgen levels using a between-brood design and evaluated its effects on nestling development, survival and immune function. Both in first and replacement broods, the embryonic development period was shorter for androgen-treated chicks than controls, but there were no differences in second broods. In replacement broods, androgen-treated chicks were heavier and larger than those hatched from control eggs, but this effect was not observed in the other breeding attempts. Androgen exposure reduced survival with respect to controls only in second broods. Regarding immune function, we detected nonsignificant trends for androgen treatment to activate two important components of innate and adaptive immunity (IL-6 and Ig-A levels, respectively). Similarly, androgen-treated chicks showed greater lymphocyte proliferation than controls in the first brood and an opposite trend in the second brood. Our results indicate that yolk androgen effects on nestling development and immunity depend on the environmental conditions of each breeding attempt. Variation in maternal androgen allocation to eggs could be explained as the result of context-dependent optimal strategies to maximize offspring fitness.
- Published
- 2015
19. Quorum-Sensing Mechanisms Mediated by Farnesol in Ophiostoma piceae: Effect on Secretion of Sterol Esterase
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de Salas, Felipe, primary, Martínez, María Jesús, additional, and Barriuso, Jorge, additional
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- 2015
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20. Engineering of a fungal laccase to develop a robust, versatile and highly-expressed biocatalyst for sustainable chemistry
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Jesper Vind, Gerard Santiago, Sibel Kilic, Joan Gilabert, Ángel T. Martínez, Victor Guallar, Felipe de Salas, Susana Camarero, Pablo Aza, Mehmet E. Sener, European Commission, Ministerio de Economía y Competitividad (España), Ministerio de Ciencia, Innovación y Universidades (España), Consejo Superior de Investigaciones Científicas (España), De Salas, Felipe, Gilabert, Joan F., Santiago, Gerard, Vind, Jesper, Guallar, Victor, Martínez, Angel T., Camarero, Susana, De Salas, Felipe [0000-0002-0057-0180], Gilabert, Joan F. [0000-0002-5008-5482], Santiago, Gerard [0000-0002-0506-3049], Vind, Jesper [0000-0002-1336-9531], Guallar, Victor [0000-0002-4580-1114], Martínez, Angel T. [0000-0002-1584-2863], and Camarero, Susana [0000-0002-2812-895X]
- Subjects
Green chemistry ,Molecular-cloning ,010402 general chemistry ,01 natural sciences ,C-terminus ,chemistry.chemical_compound ,Aniline ,Aspergillus oryzae ,Polyaniline ,Environmental Chemistry ,Enzyme kinetics ,Laccase ,biology ,010405 organic chemistry ,Substrate (chemistry) ,Directed evolution ,biology.organism_classification ,Pollution ,Combinatorial chemistry ,Melanocarpus-albomyces ,0104 chemical sciences ,Crystal-structure ,chemistry ,Mutagenesis ,Stability ,Catalytic-properties - Abstract
12 p.-12 fig.-1 tab., Fungal laccases can play an important role as biocatalysts in organic chemistry to replace chemical synthesis. In a previous work we synthesized conductive polyaniline using a high-redox potential laccase from our collection of recombinant fungal variants. Still, the oxidation of aniline is hindered by the reaction conditions (low pH and presence of anionic surfactants). Thus, we tackle here the directed evolution of the enzyme assisted by computational simulation aiming at improving aniline oxidation at the required polymerization conditions while maintaining the enzyme's substrate promiscuity. Simultaneously, its secretion by the host used for the engineering (Saccharomyces cerevisiae) was enhanced. Then, the improved laccase variant was overproduced in the industrial host Aspergillus oryzae and assayed for one-pot synthesis of polyaniline and naphtol-derived dyes whose textile dyeing properties were verified in an industrial environment. Finally, modification of its C-terminal tail further enhanced laccase stability by flexibilization of the region. The resulting biocatalyst displays noticeable stability at high temperature and extreme pH while shows improved k(cat) values on the different substrates tested. Moreover, it is remarkably produced in S. cerevisiae at rates not formerly reported in the literature. These facts, together with the overexpression in A. oryzae opens new scenarios for its further development and application., This work has been funded by the INDOX EU project (KBBE- 2013-7-613549), the Spanish projects BIO2017-86559-R and CTQ2016-79138-R and the BBI JU project WoodZymes (H2020-BBI-JU-792070). We acknowledge support of the publication fee by the CSIC Open Access Publication Support Initiative through its Unit of Information Resources for Research (URICI).
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- 2019
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21. Structural and biochemical insights into an engineered high-redox potential laccase overproduced in Aspergillus
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Alicia Virseda-Jerez, Ángel T. Martínez, Felipe de Salas, Gerard Santiago, Patrizia Gentili, Jesper Vind, Rubén Cañadas, Victor Guallar, Susana Camarero, Inés G. Muñoz, European Commission, Ministerio de Ciencia, Innovación y Universidades (España), Ministerio de Economía y Competitividad (España), De Salas, Felipe, Santiago, Gerard, Vind, Jesper, Martínez, Ángel T., Guallar, Victor, Muñoz, Inés G., Camarero, Susana, De Salas, Felipe [0000-0002-0057-0180], Santiago, Gerard [0000-0002-0506-3049], Vind, Jesper [0000-0002-1336-9531], Martínez, Ángel T. [0000-0002-1584-2863], Guallar, Victor [0000-0002-4580-1114], Muñoz, Inés G. [0000-0001-6732-4059], and Camarero, Susana [0000-0002-2812-895X]
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Models, Molecular ,crystal structure ,Glycosylation ,Chemical Phenomena ,Protein Conformation ,Aspergillus oryzae ,Protein Data Bank (RCSB PDB) ,02 engineering and technology ,Circular dichroism ,Biochemistry ,Redox ,Catalysis ,Substrate Specificity ,Structure-Activity Relationship ,03 medical and health sciences ,chemistry.chemical_compound ,X-Ray Diffraction ,Structural Biology ,Enzyme Stability ,Amino Acid Sequence ,Molecular Biology ,030304 developmental biology ,Laccase ,chemistry.chemical_classification ,0303 health sciences ,biology ,aspergillus oryzae ,circular dichroism ,fungal laccase ,kinetics ,SAXS ,Chemistry ,Wild type ,Substrate (chemistry) ,Fungal laccase ,General Medicine ,Hydrogen-Ion Concentration ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Combinatorial chemistry ,3. Good health ,Molecular Weight ,Kinetics ,Aspergillus ,Enzyme ,Crystal structures ,0210 nano-technology ,Oxidation-Reduction - Abstract
13 p.-7 fig.-2 tab, Fungal laccases have great potential as biocatalysts oxidizing a variety of aromatic compounds using oxygen as co-substrate. Here, the crystal structure of 7D5 laccase (PDB 6H5Y), developed in Saccharomyces cerevisiae and overproduced in Aspergillus oryzae, is compared with that of the wild type produced by basidiomycete PM1 (Coriolopsis sp.), PDB 5ANH. SAXS showed both enzymes form monomers in solution, 7D5 laccase with a more oblate geometric structure due to heavier and more heterogeneous glycosylation. The enzyme presents superior catalytic constants towards all tested substrates, with no significant change in optimal pH or redox potential. It shows noticeable high catalytic efficiency with ABTS and dimethyl-4-phenylenediamine, 7 and 32 times better than the wild type, respectively. Computational simulations demonstrated a more favorable binding and electron transfer from the substrate to the T1 copper due to the introduced mutations. PM1 laccase is exceptionally stable to thermal inactivation (t1/2 70 °C = 1.2 h). Yet, both enzymes display outstanding structural robustness at high temperature. They keep folded during 2 h at 100 °C though, thereafter, 7D5 laccase unfolds faster. Rigidification of certain loops due to the mutations added on the protein surface would diminish the capability to absorb temperature fluctuations leading to earlier protein unfolding., This work has been funded by the INDOX EU project (KBBE-2013-7-613549), the Spanish projects BIO2017-86559-R and CTQ2016-79138-R, the BBI JU project WoodZymes (H2020-BBI-JU-792070), the H2020-iNEXT grant numbers 1676 and ISCIII.
- Published
- 2019
22. A highly stable laccase obtained by swapping the second cupredoxin domain
- Author
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Ángel T. Martínez, Felipe de Salas, Pablo Aza, Susana Camarero, Isabel Pardo, David Rodríguez-Escribano, Agencia Estatal de Investigación (España), Ministerio de Economía y Competitividad (España), European Commission, Ministerio de Ciencia, Innovación y Universidades (España), Pardo, Isabel, De Salas, Felipe, Martínez, Ángel T., Camarero, Susana, Pardo, Isabel [0000-0002-8568-1559], De Salas, Felipe [0000-0002-0057-0180], Martínez, Ángel T. [0000-0002-1584-2863], and Camarero, Susana [0000-0002-2812-895X]
- Subjects
0301 basic medicine ,Models, Molecular ,Libraries ,Saccharomyces-cerevisiae ,Laccase Activity ,Protein Engineering ,01 natural sciences ,Lignin ,Kraft Lignin ,Substrate Specificity ,chemistry.chemical_compound ,In-vitro ,Extension ,Enzyme Stability ,Cupredoxin Domains ,Thermostability ,chemistry.chemical_classification ,Multidisciplinary ,biology ,Chemistry ,Temperature ,Hydrogen-Ion Concentration ,Directed evolution ,Ionic liquids ,High Redox Potential Laccase ,Medicine ,Stability ,Oxidation-Reduction ,Design ,Science ,Saccharomyces cerevisiae ,Protein domain ,Article ,Fungal Proteins ,03 medical and health sciences ,Saccharomyces ,Protein Domains ,Azurin ,Laccase ,010405 organic chemistry ,Basidiomycota ,Surface Salt Bridges ,biology.organism_classification ,Combinatorial chemistry ,Recombination ,0104 chemical sciences ,030104 developmental biology ,Enzyme ,Mutagenesis, Site-Directed ,Salt bridge - Abstract
10 p.-4 fig.-3 tab., The robustness of a high-redox potential laccase has been enhanced by swapping its second cupredoxin domain with that from another fungal laccase, which introduced a pool of neutral mutations in the protein sequence without affecting enzyme functionality. The new laccase showed outstanding stability to temperature, pH (2-9) and to organic solvents, while maintaining the ability to oxidize high-redox potential substrates. By engineering the signal peptide, enzyme secretion levels in Saccharomyces cerevisiae were increased, which allowed to purify the engineered enzyme for further characterization. The purified domain-swap laccase presented higher activity in the presence of ethanol or methanol, superior half-lives at 50-70 degrees C, improved stability at acidic pH, and similar catalytic efficiency for DMP albeit a lower one for ABTS (due to a shift in optimum pH). A new N-glycosylation site and a putative new surface salt-bridge were evaluated as possible determinants for the improved stability by site-directed mutagenesis. Although neither seemed to be strictly responsible for the improved thermostability, the new salt bridge was found to notably contribute to the high stability of the swapped enzyme in a broad pH range. Finally, the application potential of the new laccase was demonstrated with the enzymatic treatment of kraft lignin, an industrially relevant lignin stream, at high temperature, neutral pH and short incubation times., This work was funded by the Spanish National Projects NOESIS (BIO2014-56388-R) and GENOBIOREF (BIO2017-86559-R) and the European Project WoodZymes (H2020-BBI-JU-792070).
- Published
- 2018
23. High-throughput screening assay for laccase engineering toward lignosulfonate valorization
- Author
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Isabel Pardo, David Rodríguez-Escribano, Felipe de Salas, Susana Camarero, Ministerio de Economía y Competitividad (España), European Commission, De Salas, Felipe [0000-0002-0057-0180], Pardo, Isabel [0000-0002-8568-1559], Camarero, Susana [0000-0002-2812-895X], De Salas, Felipe, Pardo, Isabel, and Camarero, Susana
- Subjects
0301 basic medicine ,High-throughput screening ,lignosulfonate ,Saccharomyces cerevisiae ,02 engineering and technology ,Phenolic content ,Lignin ,high-throughput screening ,enzyme directed evolution ,Catalysis ,Polymerization ,laccase ,Inorganic Chemistry ,lcsh:Chemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Phenols ,High-Throughput Screening Assays ,Lignosulfonates ,Physical and Theoretical Chemistry ,Molecular Biology ,lcsh:QH301-705.5 ,Spectroscopy ,Molybdenum ,Laccase ,Chemistry ,Communication ,Organic Chemistry ,Substrate (chemistry) ,General Medicine ,Tungsten Compounds ,021001 nanoscience & nanotechnology ,Directed evolution ,Yeast ,Laccase Lignosulfonate ,Computer Science Applications ,030104 developmental biology ,Biochemistry ,lcsh:Biology (General) ,lcsh:QD1-999 ,phenolic content ,Enzyme directed evolution ,Genetic Engineering ,0210 nano-technology ,Oxidation-Reduction - Abstract
10 p.- 7 fig., The robustness of a high-redox potential laccase has been enhanced by swapping its second cupredoxin domain with that from another fungal laccase, which introduced a pool of neutral mutations in the protein sequence without affecting enzyme functionality. The new laccase showed outstanding stability to temperature, pH (2–9) and to organic solvents, while maintaining the ability to oxidize high-redox potential substrates. By engineering the signal peptide, enzyme secretion levels in Saccharomyces cerevisiae were increased, which allowed to purify the engineered enzyme for further characterization. The purified domain-swap laccase presented higher activity in the presence of ethanol or methanol, superior half-lives at 50–70 °C, improved stability at acidic pH, and similar catalytic efficiency for DMP albeit a lower one for ABTS (due to a shift in optimum pH). A new N-glycosylation site and a putative new surface salt-bridge were evaluated as possible determinants for the improved stability by site-directed mutagenesis. Although neither seemed to be strictly responsible for the improved thermostability, the new salt bridge was found to notably contribute to the high stability of the swapped enzyme in a broad pH range. Finally, the application potential of the new laccase was demonstrated with the enzymatic treatment of kraft lignin, an industrially relevant lignin stream, at high temperature, neutral pH and short incubation times., This work was funded by the Spanish National Project NOESIS (BIO2014-56388-R) and the European Projects INDOX (KBBE-2013-7-613549) and ENZOX2 (H2020-BBI-PPP-2015-2-720297).
- Published
- 2017
24. Design of an improved universal signal peptide based on the α-factor mating secretion signal for enzyme production in yeast
- Author
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Gonzalo Molpeceres, Pablo Aza, Felipe de Salas, Susana Camarero, Ministerio de Ciencia, Innovación y Universidades (España), Aza, Pablo, Molpeceres, Gonzalo, De Salas, Felipe, Camarero, Susana, Aza, Pablo [0000-0002-8703-8399], Molpeceres, Gonzalo [0000-0002-4366-9412], De Salas, Felipe [0000-0002-0057-0180], and Camarero, Susana [0000-0002-2812-895X]
- Subjects
Signal peptide ,Saccharomyces cerevisiae Proteins ,Hydrolases ,Saccharomyces cerevisiae ,Heterologous ,Protein Sorting Signals ,Enzyme heterologous expression ,Α-factor preproleader ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,Protein Precursors ,Saturated mutagenesis ,Molecular Biology ,030304 developmental biology ,2. Zero hunger ,Pharmacology ,0303 health sciences ,biology ,030306 microbiology ,Chemistry ,Synthetic design ,Cell Biology ,biology.organism_classification ,Directed evolution ,Yeast ,Recombinant Proteins ,Cell biology ,Molecular Medicine ,Original Article ,Heterologous expression ,Target protein ,Mating Factor ,Oxidoreductases - Abstract
17 p.-7 fig., Saccharomyces cerevisiae plays an important role in the heterologous expression of an array of proteins due to its easy manipulation, low requirements and ability for protein post-translational modifications. The implementation of the preproleader secretion signal of the α-factor mating pheromone from this yeast contributes to increase the production yields by targeting the foreign protein to the extracellular environment. The use of this signal peptide combined with enzyme-directed evolution allowed us to achieve the otherwise difficult functional expression of fungal laccases in S. cerevisiae, obtaining different evolved α-factor preproleader sequences that enhance laccase secretion. However, the design of a universal signal peptide to enhance the production of heterologous proteins in S. cerevisiae is a pending challenge. We describe here the optimisation of the α-factor preproleader to improve recombinant enzyme production in S. cerevisiae through two parallel engineering strategies: a bottom-up design over the native α-factor preproleader (αnat) and a top-down design over the fittest evolved signal peptide obtained in our lab (α9H2 leader). The goal was to analyse the effect of mutations accumulated in the signal sequence throughout iterations of directed evolution, or of other reported mutations, and their possible epistatic interactions. Both approaches agreed in the positive synergism of four mutations (Aα9D, Aα20T, Lα42S, Dα83E) contained in the final optimised leader (αOPT), which notably enhanced the secretion of several fungal oxidoreductases and hydrolases. Additionally, we suggest a guideline to further drive the heterologous production of a particular enzyme based on combinatorial saturation mutagenesis of positions 86th and 87th of the αOPT leader fused to the target protein., This work has been funded by the Spanish project BIO2017-86559-R, and the WoodZymes project funded by the Bio Based Industries Joint Undertaking (JU) under grant agreement No 792070. The JU receives support from the European Union’s Horizon 2020 research and innovation programme and the Bio Based Industries Consortium.
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