15 results on '"Clouet V"'
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2. Fuzzing attacks for vulnerability discovery within MQTT protocol
- Author
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Casteur, G., primary, Aubaret, A., additional, Blondeau, B., additional, Clouet, V., additional, Quemat, A., additional, Pical, V., additional, and Zitouni, R., additional
- Published
- 2020
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3. Sink-source driven metabolic acclimation of winter oilseed rape leaves (Brassica napus L.) to drought.
- Author
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Aubert M, Clouet V, Guilbaud F, Berardocco S, Marnet N, Bouchereau A, and Dellero Y
- Abstract
The crop cycle of winter oilseed rape (WOSR) incorporates source-to-sink remobilisation during the vegetative stage as a principal factor influencing the ultimate seed yield. These processes are supported by the coordinated activity of the plant's central metabolism. However, climate change-induced drought will affect the metabolic acclimation of WOSR sink/source relationships at this vegetative stage, with consequences that remain to be determined. In this study, we subjected WOSR to severe soil dehydration for 18 days and analysed the physiological and metabolic acclimation of sink and source leaves along the kinetics in combination with measurements of enzymatic activities and transcript levels. Overall, the acclimation of WOSR to drought led to subtle regulations of central metabolism in relation to leaf growth and Pro-induced osmotic adjustment. Notably, sink leaves drastically reduced their growth and transiently accumulated starch. Subsequent starch degradation correlated with the induction of beta-amylases, sucrose transporters, pyrroline-5-carboxylate synthases and proline accumulation. The functioning of the tricarboxylic acid cycle was also altered in sink leaves, as evidenced by variations in citrate, malate and associated enzymatic activities. The metabolic origin of Pro in sink leaves is discussed in relation to Pro accumulation in source leaves and the up-regulation of amino acid permease 1 and glutamine synthetase genes., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier GmbH.. All rights reserved.)
- Published
- 2024
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4. Leaf drought adaptive response in winter oilseed rape is altered at the onset of senescence: a study combining NMR relaxometry, multi-omics and microscopy.
- Author
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Boulc'h PN, Clouet V, Niogret MF, Avice JC, Musse M, and Leport L
- Subjects
- Magnetic Resonance Spectroscopy methods, Multiomics, Plant Senescence genetics, Plant Senescence physiology, Seasons, Water metabolism, Adaptation, Physiological, Brassica napus physiology, Brassica napus genetics, Droughts, Plant Leaves physiology, Plant Leaves metabolism
- Abstract
Climate change is bringing more frequent and intense droughts, reducing overall water availability and adversely affecting crops. There is a need to improve our understanding of the tissular and cellular adaptation mechanisms that are critical for plant water conservation strategies. Here, we have used NMR relaxometry in combination with microscopy and multi-omic analysis to study the effects of progressive soil drought on winter oilseed rape (WOSR, Brassica napus L., cv. Aviso) leaves. This study reveals the structural and metabolic adjustments these leaves operate to maintain cell homeostasis. Our results are original in showing that the adaptive responses are altered in leaves at the onset of senescence, associated with changes in metabolic plasticity and mesophyll structures. Thus, long-term responses in young leaves involving osmotic adjustment were combined with the maintenance of tissue hydration and cell growth, contributing to high survival and recovery capacity. For the first time, short-term responses observed in early senescent-old leaves were associated with early drought-induced dehydration of the spongy layer. However, this dehydration was not followed by osmotic adjustment and did not allow maintenance of leaf tissue turgor. These findings open further studies on the genetic variability of drought responses related to identified short- and long-term structural and metabolic plasticity traits in Brassica species., (© 2024 Scandinavian Plant Physiology Society.)
- Published
- 2024
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5. Identification of transcriptional modules linked to the drought response of Brassica napus during seed development and their mitigation by early biotic stress.
- Author
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Bianchetti G, Clouet V, Legeai F, Baron C, Gazengel K, Vu BL, Baud S, To A, Manzanares-Dauleux MJ, Buitink J, and Nesi N
- Subjects
- Plant Proteins genetics, Plant Proteins metabolism, Plasmodiophorida physiology, Transcriptome genetics, Brassica napus genetics, Brassica napus physiology, Seeds genetics, Seeds growth & development, Droughts, Gene Expression Regulation, Plant, Stress, Physiological genetics
- Abstract
In order to capture the drought impacts on seed quality acquisition in Brassica napus and its potential interaction with early biotic stress, seeds of the 'Express' genotype of oilseed rape were characterized from late embryogenesis to full maturity from plants submitted to reduced watering (WS) with or without pre-occurring inoculation by the telluric pathogen Plasmodiophora brassicae (Pb + WS or Pb, respectively), and compared to control conditions (C). Drought as a single constraint led to significantly lower accumulation of lipids, higher protein content and reduced longevity of the WS-treated seeds. In contrast, when water shortage was preceded by clubroot infection, these phenotypic differences were completely abolished despite the upregulation of the drought sensor RD20. A weighted gene co-expression network of seed development in oilseed rape was generated using 72 transcriptomes from developing seeds from the four treatments and identified 33 modules. Module 29 was highly enriched in heat shock proteins and chaperones that showed a stronger upregulation in Pb + WS compared to the WS condition, pointing to a possible priming effect by the early P. brassicae infection on seed quality acquisition. Module 13 was enriched with genes encoding 12S and 2S seed storage proteins, with the latter being strongly upregulated under WS conditions. Cis-element promotor enrichment identified PEI1/TZF6, FUS3 and bZIP68 as putative regulators significantly upregulated upon WS compared to Pb + WS. Our results provide a temporal co-expression atlas of seed development in oilseed rape and will serve as a resource to characterize the plant response towards combinations of biotic and abiotic stresses., (© 2024 The Authors. Physiologia Plantarum published by John Wiley & Sons Ltd on behalf of Scandinavian Plant Physiology Society.)
- Published
- 2024
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6. [Implementation of RPNs in psychiatry and mental health].
- Author
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Henriot T and Clouet V
- Subjects
- Humans, Mental Health, France, Psychiatry, Advanced Practice Nursing
- Abstract
Advanced practice nursing, a profession created in 2018, is expanding rapidly in France. In order for it to be operational, but also to facilitate its deployment and implementation, changes in the legislative and regulatory texts concerning all the mentions are still necessary. For advanced practice nurses with a diploma in psychiatry and mental health, the challenges in terms of training, implementation and prospects for autonomy are significant in view of the difficulties in this care sector., (Copyright © 2023 Elsevier Masson SAS. All rights reserved.)
- Published
- 2023
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7. New insights into chlorophyll-WSCP (water-soluble chlorophyll proteins) interactions : The case study of BnD22 (Brassica napus drought-induced 22 kDa).
- Author
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Bouargalne Y, Raguénès-Nicol C, Guilbaud F, Cheron A, Clouet V, Deleu C, and Le Cahérec F
- Subjects
- Droughts, Solubility, Water metabolism, Brassica napus metabolism, Chlorophyll metabolism
- Abstract
The water-soluble chlorophyll-proteins (WSCP) of class II from Brassicaceae are non-photosynthetic proteins that bind chlorophylls (Chls) and chlorophyll derivatives. Their physiological roles, biochemical functions and mode of action are still unclear. It is assumed that the WSCPs have a protection function against Chl photodamage during stressful conditions. WSCPs are subdivided into class IIA and class IIB according to their apparent Chla/b binding ratio. Although their Chla/Chlb binding selectivity has been partly characterized, their Chl affinities are not yet precisely defined. For instance, WSCPs IIA do not show any Chl binding preference while WSCPs IIB have greater affinity to Chlb. In this study, we present a novel method for assessment of Chl binding to WSCPs based on the differences of Chl photobleaching rates in a large range of Chl/protein ratios. The protein we have chosen to study WSCP is BnD22, a WSCP IIA induced in the leaves of Brassica napus under water deficit. BnD22 formed oligomeric complexes upon binding to Chla and/or Chlb allowing a protective effect against photodamage. The binding constants indicate that BnD22 binds with high affinity the Chls and with a strong selectivity to Chla. Moreover, dependending of Chl/protein ratio upon reconstitution, two distinct binding events were detected resulting from difference of Chl stoichiometry inside oligomeric complexes., (Copyright © 2022 Elsevier Masson SAS. All rights reserved.)
- Published
- 2022
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8. RNA sequencing data for responses to drought stress and/or clubroot infection in developing seeds of Brassica napus .
- Author
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Bianchetti G, Clouet V, Legeai F, Baron C, Gazengel K, Carrillo A, Manzanares-Dauleux MJ, Buitink J, and Nesi N
- Abstract
Oilseed rape ( Brassica napus L.) is the third largest oil crop worldwide. Like other crops, oilseed rape faces unfavorable environmental conditions resulting from multiple and combined actions of abiotic and biotic constraints that occur throughout the growing season. In particular drought severely reduces seed yield but also impacts seed quality in oilseed rape. In addition, clubroot disease, caused by the pathogen Plasmodiophora brassicae , limits the yield of the oilseed rape crops grown in infected areas. Clubroot induces swellings or galls on the roots that decrease the flow of water and nutrients within the plant. Furthermore, combinations of different stresses lead to complex plant responses that can not be predicted by the simple addition of individual stress responses. Indeed, an abiotic constraint can either reduce or stimulate the plant response to a pathogen or pest. Transcriptome datasets from different conditions are key resources to improve our knowledge of environmental stress-resistance mechanisms in plant organs. Here, we describe a RNA-seq dataset consisting of 72 samples of immature B. napus seeds from plants grown either under drought, infected with P. brassicae , or a combination of both stresses. A total of 67.6 Gb of transcriptome paired-end reads were filtered, mapped onto the B. napus reference genome Darmor- bzh and used for identification of differentially expressed genes and gene ontology enrichment. The raw reads are available under accession PRJNA738318 at NCBI Sequence Read Archive (SRA) repository. The dataset is a resource for the scientific community exploring seed plasticity., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships which have or could be perceived to have influenced the work reported in this article., (© 2021 The Author(s). Published by Elsevier Inc.)
- Published
- 2021
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9. Leaf status and environmental signals jointly regulate proline metabolism in winter oilseed rape.
- Author
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Dellero Y, Clouet V, Marnet N, Pellizzaro A, Dechaumet S, Niogret MF, and Bouchereau A
- Subjects
- Gene Expression Regulation, Plant, Nitrogen metabolism, Plant Leaves metabolism, Proline metabolism, Brassica napus genetics, Brassica napus metabolism
- Abstract
Proline metabolism is an essential component of plant adaptation to multiple environmental stress conditions that is also known to participate in specific developmental phases, particularly in reproductive organs. Recent evidence suggested a possible role for proline catabolism in Brassica napus for nitrogen remobilization processes from source leaves at the vegetative stage. Here, we investigate transcript levels of Δ1-PYRROLINE-5-CARBOXYLATE SYNTHASE (P5CS) and PROLINE DEHYDROGENASE (ProDH) genes at the vegetative stage with respect to net proline biosynthesis and degradation fluxes in leaves having a different sink/source balance. We showed that the underexpression of three P5CS1 genes in source leaves was accompanied by a reduced commitment of de novo assimilated 15N towards proline biosynthesis and an overall depletion of free proline content. We found that the expression of ProDH genes was strongly induced by carbon starvation conditions (dark-induced senescence) compared with early senescing leaves. Our results suggested a role for proline catabolism in B. napus, but acting only at a late stage of senescence. In addition, we also identified some P5CS and ProDH genes that were differentially expressed during multiple processes (leaf status, dark to light transition, and stress response)., (© The Author(s) 2019. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.)
- Published
- 2020
- Full Text
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10. [Nurses' feedback on advanced nursing practice in mental health].
- Author
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Clouet V, Gitzhoffen L, and Oriez B
- Subjects
- Humans, Nurse's Role, Advanced Practice Nursing, Mental Health, Nurse Clinicians
- Abstract
Nurses will soon be able to develop advanced practice in mental health through a state certified diploma. This new role will see caregivers acquire other competencies, such as prescribing, and marks a development of the profession through the growth of nursing sciences. The evolution of practices and the clinical approach in care would gain from collaboration between advanced practice nurses undergoing training and qualified clinical nurse specialists. Based on feedback from nurses in the field, perspectives for collaboration and organisation are assessed in terms of the health challenges facing our society., (Copyright © 2019 Elsevier Masson SAS. All rights reserved.)
- Published
- 2019
- Full Text
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11. Molecular evolution and transcriptional regulation of the oilseed rape proline dehydrogenase genes suggest distinct roles of proline catabolism during development.
- Author
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Faës P, Deleu C, Aïnouche A, Le Cahérec F, Montes E, Clouet V, Gouraud AM, Albert B, Orsel M, Lassalle G, Leport L, Bouchereau A, and Niogret MF
- Subjects
- Brassica napus genetics, Brassica napus growth & development, Plant Proteins genetics, Plant Proteins metabolism, Proline Oxidase genetics, Brassica napus enzymology, Brassica napus metabolism, Evolution, Molecular, Gene Expression Regulation, Plant, Proline metabolism, Proline Oxidase metabolism
- Abstract
Main Conclusion: Six BnaProDH1 and two BnaProDH2 genes were identified in Brassica napus genome. The BnaProDH1 genes are mainly expressed in pollen and roots' organs while BnaProDH2 gene expression is associated with leaf vascular tissues at senescence. Proline dehydrogenase (ProDH) catalyzes the first step in the catabolism of proline. The ProDH gene family in oilseed rape (Brassica napus) was characterized and compared to other Brassicaceae ProDH sequences to establish the phylogenetic relationships between genes. Six BnaProDH1 genes and two BnaProDH2 genes were identified in the B. napus genome. Expression of the three paralogous pairs of BnaProDH1 genes and the two homoeologous BnaProDH2 genes was measured by real-time quantitative RT-PCR in plants at vegetative and reproductive stages. The BnaProDH2 genes are specifically expressed in vasculature in an age-dependent manner, while BnaProDH1 genes are strongly expressed in pollen grains and roots. Compared to the abundant expression of BnaProDH1, the overall expression of BnaProDH2 is low except in roots and senescent leaves. The BnaProDH1 paralogs showed different levels of expression with BnaA&C.ProDH1.a the most strongly expressed and BnaA&C.ProDH1.c the least. The promoters of two BnaProDH1 and two BnaProDH2 genes were fused with uidA reporter gene (GUS) to characterize organ and tissue expression profiles in transformed B. napus plants. The transformants with promoters from different genes showed contrasting patterns of GUS activity, which corresponded to the spatial expression of their respective transcripts. ProDHs probably have non-redundant functions in different organs and at different phenological stages. In terms of molecular evolution, all BnaProDH sequences appear to have undergone strong purifying selection and some copies are becoming subfunctionalized. This detailed description of oilseed rape ProDH genes provides new elements to investigate the function of proline metabolism in plant development.
- Published
- 2015
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12. Sixteen cytosolic glutamine synthetase genes identified in the Brassica napus L. genome are differentially regulated depending on nitrogen regimes and leaf senescence.
- Author
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Orsel M, Moison M, Clouet V, Thomas J, Leprince F, Canoy AS, Just J, Chalhoub B, and Masclaux-Daubresse C
- Subjects
- Amino Acid Sequence, Brassica napus drug effects, Brassica rapa enzymology, Brassica rapa genetics, Chromosome Mapping, Conserved Sequence, Databases, Nucleic Acid, Expressed Sequence Tags, Gene Expression Regulation, Enzymologic drug effects, Genetic Loci, Glutamate-Ammonia Ligase chemistry, Glutamate-Ammonia Ligase genetics, Glutamate-Ammonia Ligase metabolism, Molecular Sequence Annotation, Molecular Sequence Data, Nitrates pharmacology, Open Reading Frames genetics, Phylogeny, Plant Leaves drug effects, Plant Leaves genetics, Plant Proteins chemistry, Plant Proteins genetics, Plant Proteins metabolism, Polymerase Chain Reaction, RNA, Messenger genetics, RNA, Messenger metabolism, Reproduction genetics, Sequence Alignment, Brassica napus enzymology, Brassica napus genetics, Cytosol enzymology, Gene Expression Regulation, Plant drug effects, Genes, Plant, Nitrogen pharmacology, Plant Leaves growth & development
- Abstract
A total of 16 BnaGLN1 genes coding for cytosolic glutamine synthetase isoforms (EC 6.3.1.2.) were found in the Brassica napus genome. The total number of BnaGLN1 genes, their phylogenetic relationships, and genetic locations are in agreement with the evolutionary history of Brassica species. Two BnaGLN1.1, two BnaGLN1.2, six BnaGLN1.3, four BnaGLN1.4, and two BnaGLN1.5 genes were found and named according to the standardized nomenclature for the Brassica genus. Gene expression showed conserved responses to nitrogen availability and leaf senescence among the Brassiceae tribe. The BnaGLN1.1 and BnaGLN1.4 families are overexpressed during leaf senescence and in response to nitrogen limitation. The BnaGLN1.2 family is up-regulated under high nitrogen regimes. The members of the BnaGLN1.3 family are not affected by nitrogen availability and are more expressed in stems than in leaves. Expression of the two BnaGLN1.5 genes is almost undetectable in vegetative tissues. Regulations arising from plant interactions with their environment (such as nitrogen resources), final architecture, and therefore sink-source relations in planta, seem to be globally conserved between Arabidopsis and B. napus. Similarities of the coding sequence (CDS) and protein sequences, expression profiles, response to nitrogen availability, and ageing suggest that the roles of the different GLN1 families have been conserved among the Brassiceae tribe. These findings are encouraging the transfer of knowledge from the Arabidopsis model plant to the B. napus crop plant. They are of special interest when considering the role of glutamine synthetase in crop yield and grain quality in maize and wheat., (© The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology.)
- Published
- 2014
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13. Homeologous recombination plays a major role in chromosome rearrangements that occur during meiosis of Brassica napus haploids.
- Author
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Nicolas SD, Le Mignon G, Eber F, Coriton O, Monod H, Clouet V, Huteau V, Lostanlen A, Delourme R, Chalhoub B, Ryder CD, Chèvre AM, and Jenczewski E
- Subjects
- Alleles, Chromosome Segregation, Crosses, Genetic, Gene Dosage, Genetic Markers, Genome, Plant genetics, In Situ Hybridization, Fluorescence, Metaphase, Polymerase Chain Reaction, Brassica napus cytology, Brassica napus genetics, Chromosomes, Plant genetics, Gene Rearrangement, Haploidy, Meiosis genetics, Recombination, Genetic genetics
- Abstract
Chromosomal rearrangements can be triggered by recombination between distinct but related regions. Brassica napus (AACC; 2n = 38) is a recent allopolyploid species whose progenitor genomes are widely replicated. In this article, we analyze the extent to which chromosomal rearrangements originate from homeologous recombination during meiosis of haploid B. napus (n = 19) by genotyping progenies of haploid x euploid B. napus with molecular markers. Our study focuses on three pairs of homeologous regions selected for their differing levels of divergence (N1/N11, N3/N13, and N9/N18). We show that a high number of chromosomal rearrangements occur during meiosis of B. napus haploid and are transmitted by first division restitution (FDR)-like unreduced gametes to their progeny; half of the progeny of Darmor-bzh haploids display duplications and/or losses in the chromosomal regions being studied. We demonstrate that half of these rearrangements are due to recombination between regions of primary homeology, which represents a 10- to 100-fold increase compared to the frequency of homeologous recombination measured in euploid lines. Some of the other rearrangements certainly result from recombination between paralogous regions because we observed an average of one to two autosyndetic A-A and/or C-C bivalents at metaphase I of the B. napus haploid. These results are discussed in the context of genome evolution of B. napus.
- Published
- 2007
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14. Characterization of a radish introgression carrying the Ogura fertility restorer gene Rfo in rapeseed, using the Arabidopsis genome sequence and radish genetic mapping.
- Author
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Giancola S, Marhadour S, Desloire S, Clouet V, Falentin-Guyomarc'h H, Laloui W, Falentin C, Pelletier G, Renard M, Bendahmane A, Delourme R, and Budar F
- Subjects
- Arabidopsis physiology, Chromosomes, Artificial, Bacterial, Polymerase Chain Reaction, Arabidopsis genetics, Brassica genetics, Genome, Plant, Plant Proteins genetics
- Abstract
The radish Rfo gene restores male fertility in radish or rapeseed plants carrying Ogura cytoplasmic male-sterility. This system was first discovered in radish and was transferred to rapeseed for the production of F1 hybrid seeds. We aimed to identify the region of the Arabidopsis genome syntenic to the Rfo locus and to characterize the radish introgression in restored rapeseed. We used two methods: amplified consensus genetic markers (ACGMs) in restored rapeseed plants and construction of a precise genetic map around the Rfo gene in a segregating radish population. The use of ACGMs made it possible to detect radish orthologs of Arabidopsis genes in the restored rapeseed genome. We identified radish genes, linked to Rfo in rapeseed and whose orthologs in Arabidopsis are carried by chromosomes 1, 4 and 5. This indicates several breaks in colinearity between radish and Arabidopsis genomes in this region. We determined the positions of markers relative to each other and to the Rfo gene, using the progeny of a rapeseed plant with unstable meiotic transmission of the radish introgression. This enabled us to produce a schematic diagram of the radish introgression in rapeseed. Markers which could be mapped both on radish and restored rapeseed indicate that at least 50 cM of the radish genome is integrated in restored rapeseed. Using markers closely linked to the Rfo gene in rapeseed and radish, we identified a contig spanning six bacterial artificial chromosome (BAC) clones on Arabidopsis chromosome 1, which is likely to carry the orthologous Rfo gene.
- Published
- 2003
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15. Identification of the fertility restoration locus, Rfo, in radish, as a member of the pentatricopeptide-repeat protein family.
- Author
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Desloire S, Gherbi H, Laloui W, Marhadour S, Clouet V, Cattolico L, Falentin C, Giancola S, Renard M, Budar F, Small I, Caboche M, Delourme R, and Bendahmane A
- Subjects
- Amino Acid Sequence, Arabidopsis genetics, Cell Nucleus metabolism, Chloroplasts metabolism, Chromosome Mapping, Cloning, Molecular, Cytoplasm metabolism, Databases as Topic, Genetic Markers, Mitochondria metabolism, Models, Genetic, Molecular Sequence Data, Phylogeny, Physical Chromosome Mapping, Plant Proteins metabolism, Sequence Homology, Amino Acid, Genes, Plant, Raphanus genetics
- Abstract
Ogura cytoplasmic male sterility (CMS) in radish (Raphanus sativus) is caused by an aberrant mitochondrial gene, Orf138, that prevents the production of functional pollen without affecting female fertility. Rfo, a nuclear gene that restores male fertility, alters the expression of Orf138 at the post-transcriptional level. The Ogura CMS/Rfo two-component system is a useful model for investigating nuclear-cytoplasmic interactions, as well as the physiological basis of fertility restoration. Using a combination of positional cloning and microsynteny analysis of Arabidopsis thaliana and radish, we genetically and physically delimited the Rfo locus to a 15-kb DNA segment. Analysis of this segment shows that Rfo is a member of the pentatricopeptide repeat (PPR) family. In Arabidopsis, this family contains more than 450 members of unknown function, although most of them are predicted to be targeted to mitochondria and chloroplasts and are thought to have roles in organellar gene expression.
- Published
- 2003
- Full Text
- View/download PDF
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