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Sixteen cytosolic glutamine synthetase genes identified in the Brassica napus L. genome are differentially regulated depending on nitrogen regimes and leaf senescence.
- Source :
-
Journal of experimental botany [J Exp Bot] 2014 Jul; Vol. 65 (14), pp. 3927-47. Date of Electronic Publication: 2014 Feb 24. - Publication Year :
- 2014
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Abstract
- A total of 16 BnaGLN1 genes coding for cytosolic glutamine synthetase isoforms (EC 6.3.1.2.) were found in the Brassica napus genome. The total number of BnaGLN1 genes, their phylogenetic relationships, and genetic locations are in agreement with the evolutionary history of Brassica species. Two BnaGLN1.1, two BnaGLN1.2, six BnaGLN1.3, four BnaGLN1.4, and two BnaGLN1.5 genes were found and named according to the standardized nomenclature for the Brassica genus. Gene expression showed conserved responses to nitrogen availability and leaf senescence among the Brassiceae tribe. The BnaGLN1.1 and BnaGLN1.4 families are overexpressed during leaf senescence and in response to nitrogen limitation. The BnaGLN1.2 family is up-regulated under high nitrogen regimes. The members of the BnaGLN1.3 family are not affected by nitrogen availability and are more expressed in stems than in leaves. Expression of the two BnaGLN1.5 genes is almost undetectable in vegetative tissues. Regulations arising from plant interactions with their environment (such as nitrogen resources), final architecture, and therefore sink-source relations in planta, seem to be globally conserved between Arabidopsis and B. napus. Similarities of the coding sequence (CDS) and protein sequences, expression profiles, response to nitrogen availability, and ageing suggest that the roles of the different GLN1 families have been conserved among the Brassiceae tribe. These findings are encouraging the transfer of knowledge from the Arabidopsis model plant to the B. napus crop plant. They are of special interest when considering the role of glutamine synthetase in crop yield and grain quality in maize and wheat.<br /> (© The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology.)
- Subjects :
- Amino Acid Sequence
Brassica napus drug effects
Brassica rapa enzymology
Brassica rapa genetics
Chromosome Mapping
Conserved Sequence
Databases, Nucleic Acid
Expressed Sequence Tags
Gene Expression Regulation, Enzymologic drug effects
Genetic Loci
Glutamate-Ammonia Ligase chemistry
Glutamate-Ammonia Ligase genetics
Glutamate-Ammonia Ligase metabolism
Molecular Sequence Annotation
Molecular Sequence Data
Nitrates pharmacology
Open Reading Frames genetics
Phylogeny
Plant Leaves drug effects
Plant Leaves genetics
Plant Proteins chemistry
Plant Proteins genetics
Plant Proteins metabolism
Polymerase Chain Reaction
RNA, Messenger genetics
RNA, Messenger metabolism
Reproduction genetics
Sequence Alignment
Brassica napus enzymology
Brassica napus genetics
Cytosol enzymology
Gene Expression Regulation, Plant drug effects
Genes, Plant
Nitrogen pharmacology
Plant Leaves growth & development
Subjects
Details
- Language :
- English
- ISSN :
- 1460-2431
- Volume :
- 65
- Issue :
- 14
- Database :
- MEDLINE
- Journal :
- Journal of experimental botany
- Publication Type :
- Academic Journal
- Accession number :
- 24567494
- Full Text :
- https://doi.org/10.1093/jxb/eru041