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Adriaenssens, Evelien, Roux, Simon, Brister, J. Rodney, Karsch-Mizrachi, Ilene, Kuhn, Jens, Varsani, Arvind, Yigang, Tong, Reyes, Alejandro, Lood, Cédric, Lefkowitz, Elliot, Sullivan, Matthew, Edwards, Robert, Simmonds, Peter, Rubino, Luisa, Sabanadzovic, Sead, Krupovic, Mart, Dutilh, Bas, Quadram Institute, Biotechnology and Biological Sciences Research Council (BBSRC), Lawrence Berkeley National Laboratory [Berkeley] (LBNL), National Center for Biotechnology Information (NCBI), Integrated Research Facility at Fort Detrick (IRF-Frederick), National Institute of Allergy and Infectious Diseases [Bethesda] (NIAID-NIH), National Institutes of Health [Bethesda] (NIH)-National Institutes of Health [Bethesda] (NIH), Arizona State University [Tempe] (ASU), University of Cape Town, Beijing University of Chemical Technology, Universidad de los Andes [Bogota] (UNIANDES), Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven), Friedrich-Schiller-Universität = Friedrich Schiller University Jena [Jena, Germany], University of Alabama at Birmingham [ Birmingham] (UAB), Ohio State University [Columbus] (OSU), Flinders University [Adelaide, Australia], University of Oxford, CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Mississippi State University [Mississippi], Virologie des archées - Archaeal Virology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Utrecht University [Utrecht], E.M.A. gratefully acknowledges the support of the Biotechnology and Biological Sciences Research Council (BBSRC), and this research was funded by the BBSRC Institute Strategic Program Gut Microbes and Health BB/R012490/1 and its constituent projects BBS/E/F/000PR10353 and BBS/E/F/000PR10356. The work conducted by the US Department of Energy (DOE) Joint Genome Institute (S.R.) was supported by the Office of Science of the DOE under contract no. DE-AC02-05CH11231. Work by J.R.B. and I.K.M. was supported by the National Center for Biotechnology Information of the National Library of Medicine (NLM), NIH. This work was supported in part through Laulima Government Solutions, LLC, prime contract with the NIAID under contract no. HHSN272201800013C. J.H.K. performed this work as an employee of Tunnell Government Services (TGS), a subcontractor of Laulima Government Solutions, LLC, under Contract No. HHSN272201800013C. M.B.S. was supported by the US National Science Foundation Award #1759874. R.A.E. was supported by the National Institute of Diabetes and Digestive and Kidney Diseases of the NIH under award no. RC2DK116713 and by the Australian Research Council under award no. DP220102915. C.L. was supported by a Postdoctoral Mandate from KU Leuven (PDMt2/21/038) and the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany’s Excellence Strategy – EXC 2051 – Project-ID 390713860. E.J.L. was supported by the NIAID, NIH, under award no. U24AI162625. P.S. was supported by a Wellcome Trust Biomedical Resource grant (WT108418AIA). S.S. acknowledges support from the Mississippi Agricultural and Forestry Experiment Station (MAFES), US Department of Agriculture (USDA)–Agricultural Research Service project 58-6066-9-033, and the National Institute of Food and Agriculture, USDA, Hatch Project, under accession USDA 1021494. B.E.D. was supported by the European Research Council (ERC) Consolidator Grant 865694: DiversiPHI, the DFG under Germany’s Excellence Strategy – EXC 2051 – Project-ID 390713860, the Alexander von Humboldt Foundation in the context of an Alexander von Humboldt Professorship founded by German Federal Ministry of Education and Research, and the European Union’s Horizon 2020 research and innovation program, under Marie Skłodowska-Curie Actions Innovative Training Networks grant agreement no. 955974 (VIROINF).

Siddell, Stuart G., Smith, Donald B., Adriaenssens, Evelien, Alfenas-Zerbini, Poliane, Dutilh, Bas E., Garcia, Maria Laura, Junglen, Sandra, Krupovic, Mart, Kuhn, Jens H., Lambert, Amy J., Lefkowitz, Elliot J., Łobocka, Małgorzata, Mushegian, Arcady R., Oksanen, Hanna M., Robertson, David L., Rubino, Luisa, Sabanadzovic, Sead, Simmonds, Peter, Suzuki, Nobuhiro, Van Doorslaer, Koenraad, Vandamme, Anne-Mieke, Varsani, Arvind, Zerbini, F. Murilo, University of Bristol [Bristol], University of Oxford, Quadram Institute, Biotechnology and Biological Sciences Research Council (BBSRC), Universidade Federal de Viçosa = Federal University of Viçosa (UFV), Friedrich-Schiller-Universität = Friedrich Schiller University Jena [Jena, Germany], Utrecht University [Utrecht], Instituto de Biotecnología y Biología Molecular [La Plata] (IBBM), Consejo Nacional de Investigaciones Científicas y Técnicas [Buenos Aires] (CONICET)-Facultad de Ciencias Exactas [La Plata], Universidad Nacional de la Plata [Argentine] (UNLP)-Universidad Nacional de la Plata [Argentine] (UNLP), Free University of Berlin (FU), Virologie des archées - Archaeal Virology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Integrated Research Facility at Fort Detrick (IRF-Frederick), National Institute of Allergy and Infectious Diseases [Bethesda] (NIAID-NIH), National Institutes of Health [Bethesda] (NIH)-National Institutes of Health [Bethesda] (NIH), National Center for Emerging and Zoonotic Infectious Diseases (NCEZID), Centers for Disease Control and Prevention (CDC), University of Alabama at Birmingham [ Birmingham] (UAB), Institute of Biochemistry and Biophysics [Warsaw] (IBB), National Science Foundation [Arlington] (NSF), Helsingin yliopisto = Helsingfors universitet = University of Helsinki, MRC - University of Glasgow Centre for Virus Research, CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Mississippi State University [Mississippi], Okayama University, University of Arizona, Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven), Universidade Nova de Lisboa = NOVA University Lisbon (NOVA), Arizona State University [Tempe] (ASU), D.B.S. is supported by a grant from the Microbiology Society. B.E.D. is supported by the European Research Council (ERC) Consolidator grant 865694: DiversiPHI, the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany ́s Excellence Strategy – EXC 2051 – Project-ID 390713860, the Alexander von Humboldt Foundation in the context of an Alexander von Humboldt-Professorship founded by German Federal Ministry of Education and Research, and the European Union’s Horizon 2020 research and innovation programme, under the Marie Skłodowska-Curie Actions Innovative Training Networks grant agreement no. 955 974 (VIROINF). E.J.L. – this publication was supported by the National Institutes of Health (NIH) National Institute of Allergy And Infectious Diseases (NIAID), under Award Number U24AI162625. This work was also supported in part through the Laulima Government Solutions, LLC, prime contract with the NIH NIAID, under Contract No. HHSN272201800013C. J.H.K. performed this work as an employee of Tunnell Government Services (TGS), a subcontractor of Laulima Government Solutions, LLC, under Contract No. HHSN272201800013C. A.R.M. is a Program Director at the U.S. National Science Foundation (NSF), the statements and opinions expressed herein are made in a personal capacity and do not constitute endorsement by NSF or the government of the United States. H.M.O. was supported by the University of Helsinki and Academy of Finland funding for FINStruct, part of Biocenter Finland and Instruct-ERIC. D.L.R. is funded by the MRC (MC_UU_12014/12). S.S. acknowledges support from the Mississippi Agricultural and Forestry Experiment Station (MAFES), USDA-ARS project 58-6066-9-033 and the National Institute of Food and Agriculture, US Department of Agriculture, Hatch Project, under Accession Number 1021 494., European Project: 865694,H2020-EU.1.1. - EXCELLENT SCIENCE - European Research Council (ERC),DiversiPHI(2020), Instituto de Higiene e Medicina Tropical (IHMT), Global Health and Tropical Medicine (GHTM), and TB, HIV and opportunistic diseases and pathogens (THOP)

Peter Simmonds, Evelien M. Adriaenssens, F. Murilo Zerbini, Nicola G. A. Abrescia, Pakorn Aiewsakun, Poliane Alfenas-Zerbini, Yiming Bao, Jakub Barylski, Christian Drosten, Siobain Duffy, W. Paul Duprex, Bas E. Dutilh, Santiago F. Elena, Maria Laura García, Sandra Junglen, Aris Katzourakis, Eugene V. Koonin, Mart Krupovic, Jens H. Kuhn, Amy J. Lambert, Elliot J. Lefkowitz, Małgorzata Łobocka, Cédric Lood, Jennifer Mahony, Jan P. Meier-Kolthoff, Arcady R. Mushegian, Hanna M. Oksanen, Minna M. Poranen, Alejandro Reyes-Muñoz, David L. Robertson, Simon Roux, Luisa Rubino, Sead Sabanadzovic, Stuart Siddell, Tim Skern, Donald B. Smith, Matthew B. Sullivan, Nobuhiro Suzuki, Dann Turner, Koenraad Van Doorslaer, Anne-Mieke Vandamme, Arvind Varsani, Nikos Vasilakis, University of Oxford, Quadram Institute Bioscience [Norwich, U.K.] (QIB), Biotechnology and Biological Sciences Research Council (BBSRC), Universidade Federal de Viçosa = Federal University of Viçosa (UFV), Center for Cooperative Research in Biosciences [Derio, Spain], Mahidol University [Bangkok], University of Chinese Academy of Sciences [Beijing] (UCAS), Rutgers, The State University of New Jersey [New Brunswick] (RU), Rutgers University System (Rutgers), Utrecht University [Utrecht], Charité - UniversitätsMedizin = Charité - University Hospital [Berlin], National Institutes of Health [Bethesda] (NIH), Virologie des archées - Archaeal Virology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), University College Cork (UCC), MRC - University of Glasgow Centre for Virus Research, Lawrence Berkeley National Laboratory [Berkeley] (LBNL), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Mississippi State University [Mississippi], Okayama University, University of the West of England [Bristol] (UWE Bristol), Universidade Nova de Lisboa = NOVA University Lisbon (NOVA), Arizona State University [Tempe] (ASU), The University of Texas Medical Branch (UTMB), European Project: 865694,H2020-EU.1.1. - EXCELLENT SCIENCE - European Research Council (ERC),DiversiPHI(2020), Instituto de Higiene e Medicina Tropical (IHMT), Global Health and Tropical Medicine (GHTM), TB, HIV and opportunistic diseases and pathogens (THOP), Faculty Common Matters (Faculty of Biology and Environmental Sciences), Molecular Principles of Viruses, Molecular and Integrative Biosciences Research Programme, and Molecular and Translational Virology

Postler, Thomas S., Rubino, Luisa, Adriaenssens, Evelien M., Dutilh, Bas E., Harrach, Balázs, Junglen, Sandra, Kropinski, Andrew M., Krupovic, Mart, Wada, Jiro, Crane, Anya, Kuhn, Jens H., Mushegian, Arcady, Rūmnieks, Jānis, Sabanadzovic, Sead, Simmonds, Peter, Varsani, Arvind, Zerbini, F. Murilo, Callanan, Julie, Draper, Lorraine A., Hill, Colin, Stockdale, Stephen R., Theoretical Biology and Bioinformatics, Sub Bioinformatics, Columbia University Irving Medical Center (CUIMC), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Quadram Institute Bioscience [Norwich, U.K.] (QIB), Biotechnology and Biological Sciences Research Council (BBSRC), Friedrich-Schiller-Universität = Friedrich Schiller University Jena [Jena, Germany], Utrecht University [Utrecht], Institute for Veterinary Medical Research [Budapest] (AOTI), Centre for Agricultural Research [Budapest] (ATK), Hungarian Academy of Sciences (MTA)-Hungarian Academy of Sciences (MTA), Humboldt University Of Berlin, University of Guelph, Virologie des archées - Archaeal Virology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), National Institutes of Health [Bethesda] (NIH), National Science Foundation [Arlington] (NSF), Latvian Biomedical Research and Study Centre [Rīga], Mississippi State University [Mississippi], University of Oxford, Arizona State University [Tempe] (ASU), University of Cape Town, Universidade Federal de Viçosa = Federal University of Viçosa (UFV), University College Cork (UCC), This work was supported in part through Laulima Government Solutions, LLC prime contract with the U.S. National Institute of Allergy and Infectious Diseases (NIAID) under Contract No. HHSN272201800013C. A.C. and J.W. performed this work as employees or affiliates of Laulima Government Solutions, LLC. J.H.K. performed this work as an employee of Tunnell Government Services (TGS), a subcontractor of Laulima Government Solutions, LLC under Contract No. HHSN272201800013C. This publication has emanated from research conducted with the financial support of Science Foundation Ireland under grant numbers SFI/12/RC/2273_P2 and SFI/14/SP APC/B3032 (J.C., L.A.D, C.H. and S.R.S). E.M.A. gratefully acknowledges the support of the Biotechnology and Biological Sciences Research Council (BBSRC), this research was funded by the BBSRC Institute Strategic Program Gut Microbes and Health BB/R012490/1 and its constituent project(s) BBS/E/F/000PR10353 and BBS/E/F/000PR10356. B.E.D. was supported by the European Research Council (ERC) Consolidator grant 865694: DiversiPHI and the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy EXC 2051 Project-ID 390713860. B.H. is supported by the National Research, Development and Innovation Office—NKFIH (NN140356). A.R.M. is a Program Director at the U.S. National Science Foundation (NSF), but the statements and opinions expressed herein are made in the personal capacity and do not constitute the endorsement by NSF or the government of the United States. S.S. acknowledges partial support from the Special Research Initiative (MAFES) USDA-ARS project 58-6066-9-033 and the National Institute of Food and Agriculture, U.S. Department of Agriculture, Hatch Project 1021494., European Project: 865694,H2020-EU.1.1. - EXCELLENT SCIENCE - European Research Council (ERC),DiversiPHI(2020), Theoretical Biology and Bioinformatics, and Sub Bioinformatics

Walker, Peter J, Siddell, Stuart G, Lefkowitz, Elliot J, Mushegian, Arcady R, Adriaenssens, Evelien M, Alfenas-Zerbini, Poliane, Dempsey, Donald M, Dutilh, Bas E, García, María Laura, Curtis Hendrickson, R, Junglen, Sandra, Krupovic, Mart, Kuhn, Jens H, Lambert, Amy J, Łobocka, Małgorzata, Oksanen, Hanna M, Orton, Richard J, Robertson, David L, Rubino, Luisa, Sabanadzovic, Sead, Simmonds, Peter, Smith, Donald B, Suzuki, Nobuhiro, Van Doorslaer, Koenraad, Vandamme, Anne-Mieke, Varsani, Arvind, Zerbini, Francisco Murilo, Theoretical Biology and Bioinformatics, Sub Bioinformatics, University of Queensland [Brisbane], University of Bristol [Bristol], University of Alabama at Birmingham [ Birmingham] (UAB), National Science Foundation, Quadram Institute, Biotechnology and Biological Sciences Research Council (BBSRC), Universidade Federal de Viçosa = Federal University of Viçosa (UFV), Utrecht University [Utrecht], Instituto de Biotecnología y Biología Molecular [La Plata] (IBBM), Consejo Nacional de Investigaciones Científicas y Técnicas [Buenos Aires] (CONICET)-Facultad de Ciencias Exactas [La Plata], Universidad Nacional de la Plata [Argentine] (UNLP)-Universidad Nacional de la Plata [Argentine] (UNLP), Humboldt University Of Berlin, Virologie des archées - Archaeal Virology, Institut Pasteur [Paris] (IP), National Institutes of Health [Bethesda] (NIH), Centers for Disease Control and Prevention (CDC), Polish Academy of Sciences (PAN), Helsingin yliopisto = Helsingfors universitet = University of Helsinki, MRC - University of Glasgow Centre for Virus Research, CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Mississippi State University [Mississippi], University of Oxford, Okayama University, University of Arizona, Rega Institute for Medical Research [Leuven, België], Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven), Universidade Nova de Lisboa = NOVA University Lisbon (NOVA), Arizona State University [Tempe] (ASU), E.M.A. gratefully acknowledges funding by the U.K. Biotechnology and Biological Sciences Research Council (BBSRC), this research was funded by the BBSRC Institute Strategic Programme Gut Microbes and Health BB/R012490/1 and its constituent projects BBS/E/F/000PR10353 and BBS/E/F/000PR10356. B.E.D. is supported by the European Research Council (ERC) Consolidator grant 865694: DiversiPHI and the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany’s Excellence Strategy – EXC 2051 – Project-ID 390713860. This work was supported in part through Laulima Government Solutions, LLC prime contract with the US National Institute of Allergy and Infectious Diseases (NIAID) under Contract No. HHSN272201800013C. J.H.K. performed this work as an employee of Tunnell Government Services (TGS), a subcontractor of Laulima Government Solutions, LLC under Contract No. HHSN272201800013C. A.R.M. is a Program Director at the U.S. National Science Foundation (NSF), the statements and opinions expressed herein are made in a personal capacity and do not constitute endorsement by NSF or the government of the United States. H.M.O. was supported by the University of Helsinki and Academy of Finland by funding for FINStruct and Instruct Centre FI, part of Biocenter Finland and Instruct-ERIC. D.L.R. is supported by the U.K. Medical Research Council (MC_UU_1201412). R.J.O. and D.B.S. were supported by the Wellcome Trust (WT108418AIA). S.S. acknowledges support from the Mississippi Agricultural and Forestry Experiment Station (MAFES), USDA-ARS project 58-6066-9-033 and the National Institute of Food and Agriculture, U.S. Department of Agriculture, Hatch Project, under Accession Number 1021494. E.J.L, D.M.D. and R.C.H were supported by the National Institute of Allergy and Infectious Diseases of the National Institutes of Health under Award Number U24AI162625. Except for Donald M. Dempsey, R. Curtis Hendrickson, Richard J. Orton and Donald B. Smith, the authors were members of the ICTV Executive Committee during the relevant period. The views and conclusions contained in this document are those of the authors and should not be interpreted as necessarily representing the official policies, either expressed or implied, of the US Department of Health and Human Services, or of the institutions and companies affiliated with the authors. The findings and conclusions in this report are those of the authors and do not necessarily represent the official position of their affiliates, including the Centers for Disease Control and Prevention., European Project: 865694,H2020-EU.1.1. - EXCELLENT SCIENCE - European Research Council (ERC),DiversiPHI(2020), Molecular and Integrative Biosciences Research Programme, Faculty Common Matters (Faculty of Biology and Environmental Sciences), Molecular Principles of Viruses, Theoretical Biology and Bioinformatics, and Sub Bioinformatics

Brice Giffard, Silvia Winter, Silvia Guidoni, Annegret Nicolai, Maurizio Castaldini, Daniel Cluzeau, Patrice Coll, Jérôme Cortet, Edith Le Cadre, Giada d’Errico, Astrid Forneck, Elena Gagnarli, Michaela Griesser, Muriel Guernion, Alessandra Lagomarsino, Silvia Landi, Yves Le Bissonnais, Elena Mania, Stefano Mocali, Cristina Preda, Simone Priori, Annette Reineke, Adrien Rusch, Hans-Josef Schroers, Sauro Simoni, Magdalena Steiner, Elena Temneanu, Sven Bacher, Edoardo A. C. Costantini, Johann Zaller, Ilona Leyer, Santé et agroécologie du vignoble (UMR SAVE), Université de Bordeaux (UB)-Institut des Sciences de la Vigne et du Vin (ISVV)-Ecole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine (Bordeaux Sciences Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Universität für Bodenkultur Wien = University of Natural Resources and Life [Vienne, Autriche] (BOKU), Università degli studi di Torino = University of Turin (UNITO), Ecosystèmes, biodiversité, évolution [Rennes] (ECOBIO), Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2), Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2), Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS), Centro di Ricerca Agricoltura e Ambiente [CREA] (CREA-AA), Consiglio per la Ricerca in Agricoltura e l’analisi dell’economia agraria = Council for Agricultural Research and Economics (CREA), Laboratoire Interuniversitaire des Systèmes Atmosphériques (LISA (UMR_7583)), Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Centre d’Ecologie Fonctionnelle et Evolutive (CEFE), Université Paul-Valéry - Montpellier 3 (UPVM)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM), Sol Agro et hydrosystème Spatialisation (SAS), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Rennes Angers, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), University of Naples Federico II = Università degli studi di Napoli Federico II, Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), Consiglio Nazionale delle Ricerche (CNR), Research Centre for Plant Protection and Certification, Laboratoire d'étude des Interactions Sol - Agrosystème - Hydrosystème (UMR LISAH), Institut de Recherche pour le Développement (IRD)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Ovidius University of Constanta, Hochschule Geisenheim University, Institut des Sciences de la Vigne et du Vin [Villenave d'Ornon] (ISVV), Université de Bordeaux (UB), Agricultural Institute of Slovenia, University of Fribourg, University of Agricultural Sciences and Veterinary Medicine Cluj Napoca, The review formed part of the PromESSinG and VineDivers projects, funded by the 2013–2014 BiodivERsA/FACCE JPI joint call for research proposals with the national funders Bundesministerium für Bildung und Forschung (BMBF, Germany), Agence Nationale de la Recherche (ANR, France), Executive Agency for Higher Education, Research, Development and Innovation Funding (UEFISCDI, Romania), Ministerio des economía y competitividad (MINECO, Spain), FWF-Der Wissenschaftsfonds (Austria) and the Swiss National Science Foundation (SNSF, Switzerland Grant No: 40FA40_158390). The contract of BG was supported in 2017 by the European Union Seventh Framework Program via a grant from the PromESSinG project. Contributions to this review were also supported by the research project ReSolVe funded by transnational funding bodies, being partners of the FP7 ERA-net project, CORE Organic Plus, and the cofound from the European Commission, and by the research project SECBIVIT which was funded through the 2017–2018 Belmont Forum and BiodivERsA joint call for research proposals, under the BiodivScen ERA-Net COFUND program, and with the funding organizations: AEI/Spain, BMBF/Germany, ANR/France, NWO/Netherlands, UEFISCDI/Romania, FWF/Austria (Grant No: I 4025-B32) and the NSF/United States (Grant No: 1850943). Researches on soil biodiversity conducted in the SAVE unit (BG and ARu) were supported by the Conseil Interprofessionel des Vins de Bordeaux CIVB during the Phytae project (2018–2020) and the Endless project (2021–2024)., Université de Rennes (UR)-Institut Ecologie et Environnement (INEE), Université de Rennes (UR)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS), Université Paul-Valéry - Montpellier 3 (UPVM)-École Pratique des Hautes Études (EPHE), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Université de Fribourg = University of Fribourg (UNIFR), and University of Agricultural Sciences and Veterinary Medicine Cluj Napoca = Universitatea de Științe Agricole și Medicină Veterinară Cluj-Napoca

Martino Adamo, Sophie Comtet-Marre, Enrico Büttner, Harald Kellner, Patricia Luis, Laurent Vallon, Rocio Prego, Martin Hofrichter, Mariangela Girlanda, Pierre Peyret, Roland Marmeisse, Department of Life Sciences and System Biology (DBios), Università degli studi di Torino = University of Turin (UNITO), Laboratoire d'Ecologie Microbienne - UMR 5557 (LEM), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Ecole Nationale Vétérinaire de Lyon (ENVL)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), International Institute Zittau, Technische Universität Dresden = Dresden University of Technology (TU Dresden), Microbiologie Environnement Digestif Santé (MEDIS), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université Clermont Auvergne (UCA), Institut de Systématique, Evolution, Biodiversité (ISYEB ), Muséum national d'Histoire naturelle (MNHN)-École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), and National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR)

Benedicte Lebas, Ian Adams, Maher Al Rwahnih, Steve Baeyen, Guillaume J. Bilodeau, Arnaud G. Blouin, Neil Boonham, Thierry Candresse, Anne Chandelier, Kris De Jonghe, Adrian Fox, Yahya Z. A. Gaafar, Pascal Gentit, Annelies Haegeman, Wellcome Ho, Oscar Hurtado‐Gonzales, Wilfried Jonkers, Jan Kreuze, Denis Kutjnak, Blanca Landa, Mingxin Liu, François Maclot, Martha Malapi‐Wight, Hano J. Maree, Francesco Martoni, Natasha Mehle, Angelantonio Minafra, Dimitre Mollov, Adriana Moreira, Mark Nakhla, Françoise Petter, Alexander M. Piper, Julien Ponchart, Robbie Rae, Benoit Remenant, Yazmin Rivera, Brendan Rodoni, Johanna W. Roenhorst, Johan Rollin, Pasquale Saldarelli, Johanna Santala, Rose Souza‐Richards, Davide Spadaro, David J. Studholme, Stefanie Sultmanis, René van der Vlugt, Lucie Tamisier, Charlotte Trontin, Ines Vazquez‐Iglesias, Claudia S. L. Vicente, Bart T. L. H. Vossenberg, Thierry Wetzel, Heiko Ziebell, Sebastien Massart, Gembloux Agro-Bio Tech [Gembloux], Université de Liège, Fera Science Ltd, University of California [Davis] (UC Davis), University of California (UC), Research Institute for Agricultural, Fisheries and Food (ILVO), Canadian Food Inspection Agency (CFIA), Newcastle University [Newcastle], Biologie du fruit et pathologie (BFP), Université de Bordeaux (UB)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), 1Walloon Agricultural Research Centre, Gembloux, Belgium 2The Research Institute of Organic Agriculture (FIBL), Frick, Switzerland, Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn-Institut - Federal Research Centre for Cultivated Plants, Laboratoire de santé des végétaux (LSV Angers), Laboratoire de la santé des végétaux (LSV), Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES), Ministry for Primary Industries, Animal Plant Health Inspection Service, APHIS-USDA, Humble, Texas, 77338, USA., World Agroforestry Center [CGIAR, Pérou] (ICRAF), World Agroforestry Center [CGIAR, Kenya] (ICRAF), Consultative Group on International Agricultural Research [CGIAR] (CGIAR)-Consultative Group on International Agricultural Research [CGIAR] (CGIAR), National Institute of Biology [Ljubljana] (NIB), Centro de Investigaciones Biológicas (CSIC), Consejo Superior de Investigaciones Científicas [Madrid] (CSIC), University of Tasmania [Hobart, Australia] (UTAS), Stellenbosch University, Citrus Research International, Partenaires INRAE, Agriculture Victoria (AgriBio), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Horticultural Crops Research Unit, USDA-ARS : Agricultural Research Service, International Plant Protection Convention, European and Mediterranean Plant Protection Organization - Organisation Européenne et Méditerranéenne pour la Protection des Plantes (EPPO), Liverpool John Moores University (LJMU), Netherlands Food and Consumer Product Safety Authority (NVWA), Finnish Food Authority, International Seed Federation (ISF), Università degli studi di Torino = University of Turin (UNITO), University of Exeter, Wageningen University and Research [Wageningen] (WUR), Instituto Nacional de Investigação Agrária e Veterinária = National Institute for Agrarian and Veterinary Research [Oeiras, Portugal] (INIAV), Dienstleistungszentrum Ländlicher Raum DLR Rheinpfalz (DLR Rheinpfalz), Julius Kühn-Institute, Federal Research Centre for Cultivated Plants-Institute for Biological Control, European Project: 773139,VALITEST, and European Commission

Zerbini, Francisco Murilo, Siddell, Stuart G, Mushegian, Arcady R, Walker, Peter J, Lefkowitz, Elliot J, Adriaenssens, Evelien M, Alfenas-Zerbini, Poliane, Dutilh, Bas E, García, María Laura, Junglen, Sandra, Krupovic, Mart, Kuhn, Jens H, Lambert, Amy J, Łobocka, Małgorzata, Oksanen, Hanna M, Robertson, David L, Rubino, Luisa, Sabanadzovic, Sead, Simmonds, Peter, Suzuki, Nobuhiro, Van Doorslaer, Koenraad, Vandamme, Anne-Mieke, Varsani, Arvind, Theoretical Biology and Bioinformatics, Sub Bioinformatics, Universidade Federal de Viçosa = Federal University of Viçosa (UFV), University of Bristol [Bristol], National Science Foundation [Arlington] (NSF), University of Queensland [Brisbane], University of Alabama at Birmingham [ Birmingham] (UAB), Quadram Institute Bioscience [Norwich, U.K.] (QIB), Biotechnology and Biological Sciences Research Council (BBSRC), Friedrich-Schiller-Universität = Friedrich Schiller University Jena [Jena, Germany], Utrecht University [Utrecht], Instituto de Biotecnología y Biología Molecular [La Plata] (IBBM), Consejo Nacional de Investigaciones Científicas y Técnicas [Buenos Aires] (CONICET)-Facultad de Ciencias Exactas [La Plata], Universidad Nacional de la Plata [Argentine] (UNLP)-Universidad Nacional de la Plata [Argentine] (UNLP), Charité - UniversitätsMedizin = Charité - University Hospital [Berlin], Virologie des archées - Archaeal Virology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Integrated Research Facility at Fort Detrick (IRF-Frederick), National Institute of Allergy and Infectious Diseases [Bethesda] (NIAID-NIH), National Institutes of Health [Bethesda] (NIH)-National Institutes of Health [Bethesda] (NIH), Centers for Disease Control and Prevention [Fort Collins, Colorado, USA], Institute of Biochemistry and Biophysics, Polska Akademia Nauk = Polish Academy of Sciences (PAN), Helsingin yliopisto = Helsingfors universitet = University of Helsinki, MRC - University of Glasgow Centre for Virus Research, CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Mississippi State University [Mississippi], University of Oxford, Okayama University, BIO5 Institute, University of Arizona, Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven), Universidade Nova de Lisboa = NOVA University Lisbon (NOVA), Arizona State University [Tempe] (ASU), Research reported in this publication was supported by the National Institute of Allergy and Infectious Diseases of the National Institutes of Health under Award Number U24AI162625 to E.J.L. This work was supported in part through Laulima Government Solutions, LLC prime contract with the US National Institute of Allergy and Infectious Diseases (NIAID) under Contract No. HHSN272201800013C. J.H.K. performed this work as an employee of Tunnell Government Services (TGS), a subcontractor of Laulima Government Solutions, LLC under Contract No. HHSN272201800013C. B.E.D. is supported by the European Research Council (ERC) Consolidator Grant 865694: DiversiPHI, and the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy—EXC 2051—Project-ID 390713860. E.M.A. gratefully acknowledges the support of the Biotechnology and Biological Sciences Research Council (BBSRC), this research was funded by the BBSRC Institute Strategic Program Gut Microbes and Health BB/R012490/1 and its constituent projects BBS/E/F/000PR10353 and BBS/E/F/000PR10356. H.M.O. was supported by University of Helsinki funding for FINStruct and Instruct-ERIC research infrastructure. S.S. acknowledges partial support from the Special Research Initiative (MAFES), Mississippi State University, and from the National Institute of Food and Agriculture, US Department of Agriculture, Hatch Project 1021494. A.R.M. is a Program Director at the U.S. National Science Foundation (NSF), the statements and opinions expressed herein are made in a personal capacity and do not constitute endorsement by NSF or the government of the United States. D.L.R. is supported by the U.K. Medical Research Council (MC_UU_1201412). F.M.Z. is supported by grants from Capes (Finance code 01), CNPq and Fapemig. P.A.Z. is supported by Suzano Papel e Celulose, Capes (Finance code 01), Conselho Nacional de Desenvolvimento Científico e Tecnológico and Fundação de Amparo à Pesquisa do Estado de Minas Gerais., European Project: 865694,H2020-EU.1.1. - EXCELLENT SCIENCE - European Research Council (ERC),DiversiPHI(2020), Theoretical Biology and Bioinformatics, Sub Bioinformatics, Molecular and Integrative Biosciences Research Programme, and Molecular Principles of Viruses

Dutilh, Bas E, Varsani, Arvind, Tong, Yigang, Simmonds, Peter, Sabanadzovic, Sead, Rubino, Luisa, Roux, Simon, Muñoz, Alejandro Reyes, Lood, Cédric, Lefkowitz, Elliot J, Kuhn, Jens H, Krupovic, Mart, Edwards, Robert A, Brister, J Rodney, Adriaenssens, Evelien M, Sullivan, Matthew B, Theoretical Biology and Bioinformatics, Sub Bioinformatics, Utrecht University [Utrecht], Friedrich-Schiller-Universität = Friedrich Schiller University Jena [Jena, Germany], Arizona State University [Tempe] (ASU), University of Cape Town, Beijing University of Chemical Technology, University of Oxford [Oxford], Mississippi State University [Mississippi], Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), Consiglio Nazionale delle Ricerche (CNR), Lawrence Berkeley National Laboratory [Berkeley] (LBNL), Universidad de los Andes [Bogota] (UNIANDES), Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven), University of Alabama at Birmingham [ Birmingham] (UAB), National Institute of Allergy and Infectious Diseases [Bethesda] (NIAID-NIH), National Institutes of Health [Bethesda] (NIH), Virologie des archées - Archaeal Virology, Institut Pasteur [Paris], Flinders University [Adelaide, Australia], National Library of Medicine (NLM), National Institutes of Health [Bethesda] (NIH)-National Center for Biotechnology Information (NCBI), Quadram Institute Bioscience (QIB), Ohio State University [Columbus] (OSU), BED is supported by the European Research Council (ERC) Consolidator grant 865694: DiversiPHI. CL is supported by the Research Foundation Flanders (FWO) SB grant 1S64720N. RAE is supported by the National Institute of Diabetes and Digestive and Kidney Diseases of the National Institutes of Health (NIH) under Award Number RC2DK116713. SR is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. This work was also supported in part through Laulima Government Solutions, LLC, prime contract with the NIH National Institute of Allergy and Infectious Diseases (NIAID) under Contract No. HHSN272201800013C. JHK performed this work as an employee of Tunnell Government Services (TGS), a subcontractor of Laulima Government Solutions, LLC, under Contract No. HHSN272201800013C. SS acknowledges partial support from the Special Research Initiative (MAFES), Mississippi State University, and the National Institute of Food and Agriculture, U.S. Department of Agriculture, Hatch Project 1021494. EMA acknowledges the support of the Biotechnology and Biological Sciences Research Council (BBSRC), this research was funded by the BBSRC Institute Strategic Programme Gut Microbes and HealthBB/R012490/1 and its constituent projects BBS/E/F/000PR10353 and BBS/E/F/000PR10356. This research was supported in part by the Intramural Research Program of the National Library of Medicine at the NIH, National Library of Medicine. MBS was supported by the U.S. National Science Foundation award ABI#1759874., European Project: 865694,H2020-EU.1.1. - EXCELLENT SCIENCE - European Research Council (ERC),DiversiPHI(2020), University of Oxford, CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Quadram Institute Bioscience [Norwich, U.K.] (QIB), Biotechnology and Biological Sciences Research Council (BBSRC), Theoretical Biology and Bioinformatics, and Sub Bioinformatics

Barascou, Lena, Sene, Deborah, Barraud, Alexandre, Michez, Denis, Lefebvre, Victor, Medrzycki, Piotr, Di Prisco, Gennaro, Strobl, Verena, Yañez, Orlando, Neumann, Peter, Le Conte, Yves, Alaux, Cedric, Abeilles et Environnement (AE), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Université de Mons (UMons), Council for Agricultural Research and Economics-Research Center for Agriculture and Environment (CREA-AA), Institute for Sustainable Plant Protection, Consiglio Nazionale delle Ricerche [Roma] (CNR), Institute of Bee Health, University of Bern, European Project, Consiglio per la Ricerca in Agricoltura e l’analisi dell’economia agraria = Council for Agricultural Research and Economics (CREA), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), and European Project: 773921,Horizon 2020,PoshBee(2018)

Wagemans, Jeroen, Holtappels, Dominique, Vainio, Eeva, Rabiey, Mojgan, Marzachì, Cristina, Herrero, Salvador, Ravanbakhsh, Mohammadhossein, Tebbe, Christoph C., Ogliastro, Mylène, Ayllón, María A., Turina, Massimo, Sub Ecology and Biodiversity, Ecology and Biodiversity, Sub Ecology and Biodiversity, Ecology and Biodiversity, Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven), Natural Resources Institute Finland (LUKE), University of Birmingham [Birmingham], CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Estructura de Recerca Interdisciplinar en Biotecnologia I Biomedicina (ERI-BIOTECMED, Department of Genetics Faculty of Biological Sciences, Universidad de Valencia, Utrecht University [Utrecht], Thünen Institute of Biodiversity, Diversité, Génomes & Interactions Microorganismes - Insectes [Montpellier] (DGIMI), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université de Montpellier (UM), Universidad Politécnica de Madrid (UPM), and European Project: 773567,VIROPLANT

Walker, Peter J, Siddell, Stuart G, Lefkowitz, Elliot J, Mushegian, Arcady R, Adriaenssens, Evelien M, Alfenas-Zerbini, Poliane, Davison, Andrew J, Dempsey, Donald M, Dutilh, Bas E, García, María Laura, Harrach, Balázs, Harrison, Robert L, Hendrickson, R Curtis, Junglen, Sandra, Knowles, Nick J, Krupovic, Mart, Kuhn, Jens H, Lambert, Amy J, Łobocka, Małgorzata, Nibert, Max L, Oksanen, Hanna M, Orton, Richard J, Robertson, David L, Rubino, Luisa, Sabanadzovic, Sead, Simmonds, Peter, Smith, Donald B, Suzuki, Nobuhiro, Van Dooerslaer, Koenraad, Vandamme, Anne-Mieke, Varsani, Arvind, Zerbini, Francisco Murilo, Sub Bioinformatics, Theoretical Biology and Bioinformatics, Instituto de Higiene e Medicina Tropical (IHMT), Global Health and Tropical Medicine (GHTM), TB, HIV and opportunistic diseases and pathogens (THOP), University of Queensland [Brisbane], University of Bristol [Bristol], University of Alabama at Birmingham [ Birmingham] (UAB), National Science Foundation [Arlington] (NSF), Quadram Institute Biosciences, Universidade Federal de Vicosa (UFV), MRC - University of Glasgow Centre for Virus Research, Utrecht University [Utrecht], Consejo Nacional de Investigaciones Científicas y Técnicas [Buenos Aires] (CONICET), Institute for Veterinary Medical Research [Budapest] (AOTI), Centre for Agricultural Research [Budapest] (ATK), Hungarian Academy of Sciences (MTA)-Hungarian Academy of Sciences (MTA), Invasive Insect Biocontrol and Behavior Laboratory [Beltsville, USA], USDA Agricultural Research Service [Beltsville, Maryland], USDA-ARS : Agricultural Research Service-USDA-ARS : Agricultural Research Service, Charité - UniversitätsMedizin = Charité - University Hospital [Berlin], Institute for Animal Health, the Pirbright Institute, Virologie des archées - Archaeal Virology, Institut Pasteur [Paris], Integrated Research Facility at Fort Detrick (IRF-Frederick), National Institute of Allergy and Infectious Diseases [Bethesda] (NIAID-NIH), National Institutes of Health [Bethesda] (NIH)-National Institutes of Health [Bethesda] (NIH), Centers for Disease Control and Prevention, Polish Academy of Sciences (PAN), Harvard Medical School [Boston] (HMS), University of Helsinki, Istituto per la Protezione Sostenibile delle Piante (CNR-IPSP), UOS Torino, Mississippi State University [Mississippi], University of Oxford [Oxford], Okayama University, University of Arizona, Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven), Universidade Nova de Lisboa = NOVA University Lisbon (NOVA), Arizona State University [Tempe] (ASU), E.M.A. gratefully acknowledges funding by the U.K. Biotechnology and Biological Sciences Research Council (BBSRC), this research was funded by the BBSRC Institute Strategic Programme Gut Microbes and Health BB/R012490/1 and its constituent projects BBS/E/F/000PR10353 and BBS/E/F/000PR10356. A.J.D. is supported by the U.K. Medical Research Council (MC_UU_12014/3). B.E.D. is supported by Netherlands Organization for Scientific Research (NWO) Vidi grant 864.14.004. B.H. is supported by the National Research, Development and Innovation Office—NKFIH (NN128309). N.J.K. is partially supported by core funding provided by the Biotechnology and Biological Sciences Research Council, UK. Mention of trade names or commercial products in this publication is solely for the purpose of providing specific information and does not imply recommendation or endorsement by the U.S. Department of Agriculture. USDA is an Equal Opportunity Provider and Employer. This work was supported in part through Laulima Government Solutions, LLC prime contract with the US National Institute of Allergy and Infectious Diseases (NIAID) under Contract No. HHSN272201800013C. J.H.K. performed this work as an employee of Tunnell Government Services (TGS), a subcontractor of Laulima Government Solutions, LLC under Contract No. HHSN272201800013C. A.R.M. is a Program Director at the U.S. National Science Foundation (NSF), the statements and opinions expressed herein are made in a personal capacity and do not constitute endorsement by NSF or the government of the United States. H.M.O was supported by the University of Helsinki and Academy of Finland by funding for FINStruct and Instruct Centre FI, part of Biocenter Finland and Instruct-ERIC. D.L.R. is supported by the U.K. Medical Research Council (MC_UU_1201412). R.J.O. and D.B.S. are supported by the Wellcome Trust (WT108418AIA). S.S. acknowledges partial support from the Special Research Initiative (MAFES), Mississippi State University, and from the National Institute of Food and Agriculture, US Department of Agriculture, Hatch Project 1021494. Except for Donald M. Dempsey, R. Curtis Hendrickson, Richard J. Orton and Donald B. Smith, the authors were members of the ICTV Executive Committee during the relevant period. The views and conclusions contained in this document are those of the authors and should not be interpreted as necessarily representing the official policies, either expressed or implied, of the US Department of Health and Human Services, or of the institutions and companies affiliated with the authors., Sub Bioinformatics, Theoretical Biology and Bioinformatics, Quadram Institute Bioscience [Norwich, U.K.] (QIB), Biotechnology and Biological Sciences Research Council (BBSRC), Universidade Federal de Viçosa = Federal University of Viçosa (UFV), The Pirbright Institute, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Helsingin yliopisto = Helsingfors universitet = University of Helsinki, CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), University of Oxford, and Molecular and Integrative Biosciences Research Programme

Siddell, Stuart G, Walker, Peter J, Lefkowitz, Elliot J, Mushegian, Arcady R, Dutilh, Bas E, Harrach, Balázs, Harrison, Robert L, Junglen, Sandra, Knowles, Nick J, Kropinski, Andrew M, Krupovic, Mart, Kuhn, Jens H, Nibert, Max L, Rubino, Luisa, Sabanadzovic, Sead, Simmonds, Peter, Varsani, Arvind, Zerbini, Francisco Murilo, Davison, Andrew J, Sub Bioinformatics, Theoretical Biology and Bioinformatics, School of Cellular and Molecular Medicine [Bristol] (CellModMed), University of Bristol [Bristol], School of Biological Sciences [Brisbane], University of Queensland [Brisbane], University of Alabama at Birmingham [ Birmingham] (UAB), Division of Molecular and Cellular Biosciences [Alexandria, USA] (MCB), National Science Foundation [Arlington] (NSF), Theoretical Biology and Bioinformatics [Utrecht, The Netherlands], Utrecht University [Utrecht], Radboud University Medical Center [Nijmegen], Institute for Veterinary Medical Research [Budapest] (AOTI), Centre for Agricultural Research [Budapest] (ATK), Hungarian Academy of Sciences (MTA)-Hungarian Academy of Sciences (MTA), Invasive Insect Biocontrol and Behavior Laboratory [Beltsville, USA], USDA Agricultural Research Service [Beltsville, Maryland], USDA-ARS : Agricultural Research Service-USDA-ARS : Agricultural Research Service, Charité - UniversitätsMedizin = Charité - University Hospital [Berlin], Berlin Institute of Health (BIH), The Pirbright Institute, Biotechnology and Biological Sciences Research Council (BBSRC), University of Guelph, Virologie des archées - Archaeal Virology, Institut Pasteur [Paris] (IP), Integrated Research Facility at Fort Detrick (IRF-Frederick), National Institute of Allergy and Infectious Diseases [Bethesda] (NIAID-NIH), National Institutes of Health [Bethesda] (NIH)-National Institutes of Health [Bethesda] (NIH), Blavatnik Institute [Boston], Harvard Medical School [Boston] (HMS), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology [Mstate, USA] (BCH-EPP), Mississippi State University [Mississippi], Nuffield Department of Clinical Medicine [Oxford], University of Oxford, School of Life Sciences [Tempe, USA], Arizona State University [Tempe] (ASU), Departamento de Fitopatologia [Viçosa, Brazil] (BIOAGRO), Universidade Federal de Viçosa = Federal University of Viçosa (UFV), MRC - University of Glasgow Centre for Virus Research, A.D. is supported by Medical Research Council programme Grant MC_UU_12014/3. B.E.D. is supported by the Netherlands Organization for Scientific Research (NWO) Vidi Grant 864.14.004. B.H. is supported by National Research, Development and Innovation Office–NKFIH, NN128309. N.J.K. is funded by the Department for Environment, Food and Rural Affairs (Defra), UK (Grant no. SE2944), work at the Pirbright Institute is supported by the Biotechnology and Biological Sciences Research Council (BBSRC) (BB/E/I/00007035, BB/E/I/00007036 and BBS/E/I/00007037). J.H.K is supported through Battelle Memorial Institute’s prime contract with the US National Institute of Allergy and Infectious Diseases (NIAID) under Contract no. HHSN272200700016I. S.S. acknowledges partial financial support from Mississippi Agricultural and Forestry Experiment Station (MAFES), Mississippi State University., The authors acknowledge the contribution of ICTV Life Member, Dr. Mike Adams, to previous discussions on the need for a standard binomial nomenclature for virus species., Institute for Animal Health, the Pirbright Institute, Institut Pasteur [Paris], Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), Consiglio Nazionale delle Ricerche (CNR), University of Oxford [Oxford], Universidade Federal de Vicosa (UFV), Sub Bioinformatics, and Theoretical Biology and Bioinformatics

Peter Simmonds, Hélène Sanfaçon, Balázs Harrach, Nick J. Knowles, Arvind Varsani, Peter J. Walker, Andrew J. Davison, Arcady Mushegian, Michael J. Adams, Sead Sabanadzovic, F. Murilo Zerbini, Alexander E. Gorbalenya, Elliot J. Lefkowitz, Max L. Nibert, Mart Krupovic, Andrew M. Kropinski, Luisa Rubino, Andrew M. Q. King, Stuart G. Siddell, Jens H. Kuhn, Bas E. Dutilh, Robert L. Harrison, Sandra Junglen, Leiden University Medical Center (LUMC), Lomonosov Moscow State University (MSU), Virologie des archées - Archaeal Virology, Institut Pasteur [Paris], National Science Foundation [Arlington] (NSF), University of Guelph, School of Cellular and Molecular Medicine [Bristol] (CellModMed), University of Bristol [Bristol], Biodesign Center for Fundamental and Applied Microbiomics [ASU, Tempe], School of Life Sciences [Tempe, USA], Arizona State University [Tempe] (ASU)-Arizona State University [Tempe] (ASU), Chercheur indépendant, MRC - University of Glasgow Centre for Virus Research, Utrecht University [Utrecht], Theoretical Biology & Bioinformatics [Utrecht], University Medical Center [Utrecht], Institute for Veterinary Medical Research [Budapest] (AOTI), Centre for Agricultural Research [Budapest] (ATK), Hungarian Academy of Sciences (MTA)-Hungarian Academy of Sciences (MTA), Animal Parasitic Diseases Laboratory [Beltsville, USA], United States Department of Agriculture (USDA)-USDA Agricultural Research Service [Beltsville, Maryland], USDA-ARS : Agricultural Research Service-USDA-ARS : Agricultural Research Service, Charité - UniversitätsMedizin = Charité - University Hospital [Berlin], Institute for Animal Health, the Pirbright Institute, University of Alabama at Birmingham [ Birmingham] (UAB), Blavatnik Institute [Boston], Harvard Medical School [Boston] (HMS), Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), Consiglio Nazionale delle Ricerche (CNR), Mississippi State University [Mississippi], Agriculture and Agri-Food [Ottawa] (AAFC), Nuffield Department of Medicine [Oxford, UK] (Big Data Institute), University of Oxford [Oxford], School of Chemistry and Molecular Biosciences [Brisbane], University of Queensland [Brisbane], Universidade Federal de Vicosa (UFV), Integrated Research Facility at Fort Detrick (IRF-Frederick), National Institute of Allergy and Infectious Diseases [Bethesda] (NIAID-NIH), National Institutes of Health [Bethesda] (NIH)-National Institutes of Health [Bethesda] (NIH), A.E.G. was a Leiden University Fund (LUF) Professor. His work was supported by the EU Horizon 2020 EVAg 653316 project and the LUMC MoBiLe program. A.R.M. is a Program Director at the US National Science Foundation (NSF). His work on this project was not performed while acting in an official NSF capacity, and the statements and opinions expressed herein do not constitute the endorsement of NSF or the Government of the United States. B.E.D. was supported by the Netherlands Organisation for Scientific Research (NWO) Vidi (grant no. 864.14.004). A.J.D. is supported by the Medical Research Council (grant no. MC_UU_12014/3). B.H. was supported by National Scientific Research Fund (grant no. NN128309). S.S. is supported by the Mississippi Agricultural and Forestry Experiment Station (MAFES) and the National Institute of Food and Agriculture, US Department of Agriculture, Hatch Project 1021494. This work was supported in part through the prime contract of Laulima Government Solutions, LLC, with the US National Institute of Allergy and Infectious Diseases (NIAID) under contract no. HHSN272201800013C and Battelle Memorial Institute’s former prime contract with NIAID under contract no. HHSN272200700016I. J.H.K. performed this work as a former employee of Battelle Memorial Institute and a current employee of Tunnell Government Services (TGS), a subcontractor of Laulima Government Solutions, LLC, under contract no. HHSN272201800013C. The mention of trade names or commercial products in this publication is solely for the purpose of providing specific information and does not imply recommendation or endorsement by the US Department of Agriculture. USDA is an Equal Opportunity Provider and Employer., Universiteit Leiden, Institut Pasteur [Paris] (IP), The Pirbright Institute, Biotechnology and Biological Sciences Research Council (BBSRC), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Agriculture and Agri-Food (AAFC), University of Oxford, and Universidade Federal de Viçosa = Federal University of Viçosa (UFV)

Rustioni, L., Cola, G., Maghradze, D., Abashidze, E., Argiriou, A., Aroutiounian, R., Brazao, J., Chipashvili, R., Cocco, M., Cornea, V., Dejeu, L., Eiras-Dias, J. E., Goryslavets, S., Ibanez, J., Kocsis, L., Lorenzini, F., Maletic, E., Mamasakhlisashvili, L., Margaryan, K., Maul, Erika, Mdinaradze, I., Melyan, G., Michailidou, S., Molitor, D., Montemayor, M. I., Muñoz Organero, G., Nebish, A., Nemeth, G., Nikolaou, N., Popescu, C. F., Preiner, D., Raimondi, S., Risovannaya, V., Savin, G., Savvides, S., Schneider, A., Schwander, F., Spring, J. L., Ujmajuridze, L., Zioziou, E., Failla, O., Bacilieri, Roberto, Università degli Studi di Milano [Milano] (UNIMI), Institute of Horticulture, Viticulture and Oenology, Agricultural University of Georgia, Centre for Research and Technology Hellas (CERTH), Armenian Academy of Viticulture and Wine-making, Partenaires INRAE, Instituto Nacional de Investigação Agrária e Veterinária = National Institute for Agrarian and Veterinary Research [Oeiras, Portugal] (INIAV), Dipartimento di Agraria, University of Sassari, Research and Practical Institute for Horticulture and Food Technologies, Faculty of Horticulture, University of Agronomical Sciences and Veterinary Medicine, Research Institute of Viticulture and Oenology, Universidad de La Rioja (UR), University of Pannonia, Agroscope, University of Zagreb, Agricultural Scientific Research Center of Agriculture, Institute for grapevine breeding Geilweilerhof (IRZ), Environmental Research and Innovation (ERIN) Department, Luxembourg Institute of Science and Technology (LIST), Instituto Madrileño de Investigación y Desarrollo Rural, Agrario y Alimentario (IMIDRA), Aristotle University of Thessaloniki, National Research and Development Institute for Biotechnology in Horticulture, Istituto per la Protezione Sostenibile delle Piante (CNR), Ministry of Agriculture Rural Development and Environment, Amélioration génétique et adaptation des plantes méditerranéennes et tropicales (UMR AGAP), Institut National de la Recherche Agronomique (INRA)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), European Project: 311775,EC:FP7:KBBE,FP7-KBBE-2012-6-singlestage,INNOVINE(2013), Rustioni, L., Cola, G., Maghradze, D., Abashidze, E., Argiriou, A., Aroutiounian, R., Brazao, J., Chipashvili, R., Cocco, M., Cornea, V., Dejeu, L., Eiras Dias, J. E., Goryslavets, S., Ibanez, J., Kocsis, L., Lorenzini, F., Maletic, E., Mamasakhlisashvili, L., Margaryan, K., Maul, E., Mdinaradze, I., Melyan, G., Michailidou, S., Molitor, D., Montemayor, M. I., Munoz-Organero, G., Nebish, A., Nemeth, G., Nikolaou, N., Popescu, C. F., Preiner, D., Raimondi, S., Risovannaya, V., Savin, G., Savvides, S., Schneider, A., Schwander, F., Spring, J. L., Ujmajuridze, L., Zioziou, E., Failla, O., Bacilieri, R., Università degli Studi di Milano = University of Milan (UNIMI), Università degli Studi di Sassari = University of Sassari [Sassari] (UNISS), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), European Commission, European Cooperation in Science and Technology, Rustioni, Laura [0000-0001-8168-7753], Cola, Gabriele [0000-0003-2561-0908], Argiriou, Anagnostis [0000-0002-9164-632X], Ibáñez Marcos, Javier [0000-0002-6286-5638], Failla, Osvaldo [0000-0002-4114-062X], Rustioni, Laura, Cola, Gabriele, Argiriou, Anagnostis, Ibáñez Marcos, Javier, and Failla, Osvaldo

Peter Simmonds, Arcady Mushegian, Jens H. Kuhn, Luisa Rubino, Francisco Murilo Zerbini, Hélène Sanfaçon, Stuart G. Siddell, Michael J. Adams, Sead Sabanadzovic, Alexander E. Gorbalenya, Max L. Nibert, Andrew M. Q. King, Balázs Harrach, Nick J. Knowles, Mart Krupovic, Robert L. Harrison, Arvind Varsani, Bas E. Dutilh, Andrew J. Davison, Andrew M. Kropinski, Elliot J. Lefkowitz, Sandra Junglen, Institute for Animal Health, the Pirbright Institute, University of Alabama at Birmingham [ Birmingham] (UAB), National Science Foundation [Arlington] (NSF), Theoretical Biology & Bioinformatics [Utrecht], University Medical Center [Utrecht], Radboud University Medical Center [Nijmegen], Leiden University Medical Center (LUMC), Lomonosov Moscow State University (MSU), Hungarian Academy of Sciences (MTA), USDA Agricultural Research Service [Maricopa, AZ] (USDA), United States Department of Agriculture (USDA), Humboldt State University (HSU), German Centre for Infection Research (DZIF), University of Guelph, Biologie Moléculaire du Gène chez les Extrêmophiles (BMGE), Institut Pasteur [Paris], National Institute of Allergy and Infectious Diseases [Bethesda] (NIAID-NIH), National Institutes of Health [Bethesda] (NIH), Harvard Medical School [Boston] (HMS), Istituto per la Protezione Sostenibile delle Piante (CNR-IPSP), UOS Torino, Mississippi State University [Mississippi], Agriculture and Agri-Food [Ottawa] (AAFC), University of Bristol [Bristol], University of Oxford [Oxford], Arizona State University [Tempe] (ASU), Universidade Federal de Vicosa (UFV), University of Glasgow, A.J.D. is supported by the Medical Research Council (MC_UU_12014/3). B.E.D. is supported by Netherlands Organization for Scientific Research (NWO) Vidi Grant 864.14.004. A.E.G. is partially supported by EU project EVAg 653316 and the Leids Universiteits Fonds. N.J.K. is partially supported by core funding provided by the Biotechnology and Biological Sciences Research Council, UK. The content of this publication does not necessarily reflect the views or policies of the US Department of Health and Human Services or of the institutions and companies affiliated with the authors. This work was supported in part through Battelle Memorial Institute’s prime contract with the US National Institute of Allergy and Infectious Diseases (NIAID) under Contract No. HHSN272200700016I (J.H.K). A.R.M. is a Program Director at the U.S. National Science Foundation (NSF), his work on this project was supported in part by the NSF Independent Research and Development program, but the statements and opinions expressed herein are made in a personal capacity and do not imply endorsement by NSF or the government of the United States. S.S. acknowledges financial support from Mississippi State University (MSU)—Mississippi Agricultural and Forestry Experiment Station (MAFES) Strategic Research Initiative grants., The Pirbright Institute, Biotechnology and Biological Sciences Research Council (BBSRC), Universiteit Leiden, Institut Pasteur [Paris] (IP), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Agriculture and Agri-Food (AAFC), University of Oxford, Universidade Federal de Viçosa = Federal University of Viçosa (UFV), Sub Bioinformatics, and Theoretical Biology and Bioinformatics

Maria Navajas Navarro, Alice Delbianco, Maria Saponari, Gregor Urek, Thierry Candresse, Katharina Dehnen-Schmutz, Michael Jeger, Trond Rafoss, Stephen Parnell, Ariena H. C. van Bruggen, Wopke van der Werf, Rodrigo P. P. Almeida, Claude Bragard, R.P.J. Potting, Marie-Agnès Jacques, Domenico Bosco, Vittorio Rossi, Alexander H. Purcell, Jean-Claude Grégoire, Stephan Winter, Alan MacLeod, Björn Niere, Ewelina Czwienczek, Josep Anton Jaques Miret, Gianni Gilioli, Jonathan West, Elisavet Chatzivassiliou, Blanca B. Landa, David Caffier, Giuseppe Stancanelli, EFSA, Imperial College London, Centre for Environmental Policy, Haut Conseil des Biotechnologies (HCB), Biologie du fruit et pathologie (BFP), Université Bordeaux Segalen - Bordeaux 2-Institut National de la Recherche Agronomique (INRA)-Université Sciences et Technologies - Bordeaux 1, Agricultural University of Athens, Faculty of Crop Science [Athens], Coventry University (UK), Coventry University, Centre for Agroecology, Water and Resilience, Università degli Studi di Brescia [Brescia], Department of Molecular and Translational Medicine, University of Brescia, Université Libre de Bruxelles, Université libre de Bruxelles (ULB), Campus du Solbosch (CAMPUS DU SOLBOSCH), Universitat Jaume I, Departament de Ciències Agràries i del Medi Natural, University of Leeds, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Julius Kühn-Institut - Federal Research Centre for Cultivated Plants (JKI), University of Salford, Netherlands Food and Consumer Product Safety Authority (NVWA), University of Agder (UIA), Università cattolica del Sacro Cuore [Piacenza e Cremona] (Unicatt), Department of Sustainable Crop Production - DI.PRO.VE.S., Facoltà di Scienze agrarie, alimentari e ambientali, Università cattolica del Sacro Cuore [Milano] (Unicatt), Agricultural Institute of Slovenia, Agricultural Institute, Plant Protection Department, Institute of Food and Agricultural Sciences [Gainesville] (UF|IFAS), University of Florida [Gainesville] (UF), Emerging Pathogens Institute [Gainesville, FL, USA], Wageningen University and Research [Wageningen] (WUR), Centre for Crop Systems Analysis, Campbell University, Leibniz-Institut Deutsche Sammlung von Mikroorganismen und Zelllkulturen GmBH - DSMZ (GERMANY), Department of Environmental Science, Policy, and Management [Berkeley] (ESPM), University of California [Berkeley], University of California-University of California, Università degli studi di Torino (UNITO), Department of Agricultural, Forestry and Food Sciences [Grugliasco, TO, Italy], University of Turin, Institut de Recherche en Horticulture et Semences (IRHS), Université d'Angers (UA)-AGROCAMPUS OUEST, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Instituto de Agricultura Sostenible - Institute for Sustainable Agriculture (IAS CSIC), Consejo Superior de Investigaciones Científicas [Madrid] (CSIC), Institute for Sustainable Plant Protection of National Research Council (ISPP - CNR), Białystok University of Technology, European Food Safety Authority (EFSA), Earth and Life Institute - Environmental Sciences (ELIE), Université Catholique de Louvain = Catholic University of Louvain (UCL), European Commission Project EFSA-Q-2017-00351, Université Bordeaux Segalen - Bordeaux 2-Institut National de la Recherche Agronomique (INRA)-Université Sciences et Technologies - Bordeaux 1 (UB), Centre for Agroecology, Water and Resilience (CAWR), Università degli Studi di Brescia = University of Brescia (UniBs), University of California [Berkeley] (UC Berkeley), University of California (UC)-University of California (UC), Università degli studi di Torino = University of Turin (UNITO), Université d'Angers (UA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-INSTITUT AGRO Agrocampus Ouest, CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), and National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR)

Barbara Sanavio, Yanxiao Han, Marie Anne Rameix Welti, Chiara Martinelli, Manuela Donalisio, Patrizia Andreozzi, Marta Vallino, Ahmet Bekdemir, Samuel T. Jones, Laurent Kaiser, Caroline Tapparel, Marie Galloux, Emma Rose Janecek, Francesco Stellacci, Petr Král, Jan Weber, Jean-François Eléouët, Ronan Le Goffic, Silke Krol, Paulo Jacob Silva, David Lembo, Marco D'Alicarnasso, Jan Hodek, Valeria Cagno, Lela Vuković, Soumyo Sen, Marie Mueller, Università degli studi di Torino (UNITO), Institute of Materials, Ruhr-Universität Bochum [Bochum], Université de Genève (UNIGE), IFOM - FIRC, Centro de Investigación Cooperativa en Biomateriales (CIC biomaGUNE), Fondazione CEN, Unité de recherche Virologie et Immunologie Moléculaires (VIM (UR 0892)), Institut National de la Recherche Agronomique (INRA), Université Paris Saclay (COmUE), University of Manchester [Manchester], Istituto per la Protezione Sostenibile delle Piante (CNR), Czech Academy of Sciences [Prague] (CAS), University of Illinois, University of Illinois System, Fondazione IRCCS Istituto Neurologico 'Carlo Besta', Laboratoire de Microbiologie, Hôpital Raymond Poincareé, Université de Versailles Saint-Quentin-en-Yvelines (UVSQ), Hôpitaux Universitaires de Genève (HUG), University of Texas, IRCCS Ist Tumori Giovanni Paolo II, Bari, Italy, Partenaires INRAE, Fdn IRCCS Ist Neurol Carlo Besta, IFOM IEO Campus, Milan, Italy, Ecole Polytechnique Fédérale de Lausanne (EPFL), Swiss National Science Foundation [NRP 64], NCCR on bio-inspired materials, University of Turin, Ministry of Education, Youth and Sports of the Czech Republic [LK11207], Leenaards Foundation, NSF [DMR-1506886], UTEP, Ile de France region (SESAME), European Project: 646364,H2020,H2020-NMP-PILOTS-2014,NANOFACTURING(2015), Università degli studi di Torino = University of Turin (UNITO), Université de Genève = University of Geneva (UNIGE), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), and National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR)

Schuller, F., Urquhart, J., Bronfman, L., Csengeri, T., Bontemps, S., Duarte-Cabral, A., Giannetti, A., Ginsburg, A., Henning, T., Immer, K., Leurini, S., Mattern, M., Menten, K., Molinari, S., Muller, E., Sánchez-Monge, A., Schisano, E., Suri, S., Testi, L., Ke Wang, Wyrowski, F., Zavagno, A., Laboratoire de Physique des Lasers (LPL), Université Paris 13 (UP13)-Centre National de la Recherche Scientifique (CNRS), Mars Desert Research Station (MDRS), Departamento de Astronomia (DAS), FORMATION STELLAIRE 2016, Laboratoire d'Astrophysique de Bordeaux [Pessac] (LAB), Université de Bordeaux (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université de Bordeaux (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS), European Southern Observatory (ESO), Max-Planck-Institut für Radioastronomie (MPIFR), Istituto per la Protezione Sostenibile delle Piante (CNR), INAF - Osservatorio Astrofisico di Arcetri (OAA), Istituto Nazionale di Astrofisica (INAF), University of Oxford [Oxford], Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Laboratoire d'Astrophysique de Marseille (LAM), Centre National de la Recherche Scientifique (CNRS)-Institut national des sciences de l'Univers (INSU - CNRS)-Aix Marseille Université (AMU)-Centre National d'Études Spatiales [Toulouse] (CNES), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), University of Oxford, and Aix Marseille Université (AMU)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National d'Études Spatiales [Toulouse] (CNES)-Centre National de la Recherche Scientifique (CNRS)

Vitali, Marco, Cochard, Hervé, Ponomarenko, Alexandre, Schubert, Andrea, Perrone, Irene, Gambino, Giorgio, Lovisolo, Claudio, Forest and Food Sciences, Università degli studi di Torino = University of Turin (UNITO), Laboratoire de Physique et Physiologie Intégratives de l'Arbre Fruitier et Forestier (PIAF), Institut National de la Recherche Agronomique (INRA)-Université Blaise Pascal - Clermont-Ferrand 2 (UBP), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), University of Turin, Institute for Sustainable Plant Protection, and Consiglio Nazionale delle Ricerche [Roma] (CNR)

Pia Addison, Juan Antonio Ávalos, Didier Crochard, Antonia Soto, Ferran Palero, Thibaut Malausa, Jan H. Giliomee, Ferran Garcia-Marí, Aleixandre Beltrà, Emilio Guerrieri, Cristina Navarro-Campos, Universitat Politècnica de València (UPV), Department of Conservation Ecology and Entomology, Stellenbosch University, Institut Sophia Agrobiotech (ISA), Centre National de la Recherche Scientifique (CNRS)-Université Nice Sophia Antipolis (... - 2019) (UNS), COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Institut National de la Recherche Agronomique (INRA), Institute for Sustainable Plant Protection, Consiglio Nazionale delle Ricerche [Roma] (CNR), Centre for Invasion Biology, Department of Botany and Zoology, European Union Seventh Framework Programme FP7-IAPP 'COLBICS' [324475], European Union Seventh Framework Programme FP7-IRSES 'BIOMODICS' [612566], European Project: 269196,EC:FP7:PEOPLE,FP7-PEOPLE-2010-IRSES,IPRABIO(2011), Institut National de la Recherche Agronomique (INRA)-Université Nice Sophia Antipolis (1965 - 2019) (UNS), COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), and Soto, Antonia

Kamoun S, Furzer O, Jones JD, Judelson HS, Ali GS, Dalio RJ, Roy SG, Schena L, Zambounis A, Panabières F, Cahill D, Ruocco M, Figueiredo A, Chen XR, Hulvey J, Stam R, Lamour K, Gijzen M, Tyler BM, Grünwald NJ, Mukhtar MS, Tomé DF, Tör M, Van den Ackerveken G, McDowell J, Daayf F, Fry WE, Lindqvist-Kreuze H, Meijer HJ, Petre B, Ristaino J, Yoshida K, Birch PR, Govers F, Sub Plant-Microbe Interactions, Plant Microbe Interactions, The Sainsbury Laboratory [Norwich] (TSL), Department of Plant Pathology & Microbiology [Riverside], University of California [Riverside] (UCR), University of California-University of California, Department of Plant Pathology and MREC, IFAS [University of Florida], University of Florida [Gainesville] (UF), Centro de Citricultura Sylvio Moreira/Instituto Agronomico, Università degli Studi Mediterranea di Reggio Calabria, BIOlogie et GEstion des Risques en agriculture (BIOGER), AgroParisTech-Institut National de la Recherche Agronomique (INRA), Deakin University, Burwood, Australia, Deakin University [Burwood], Institute for Sustainable Plant Protection of National Research Council (ISPP - CNR), Center for Biodiversity, Functional & Integrative Genomics, Universidade de Lisboa (ULISBOA), Stockbridge School of Agriculture, University of Massachusetts System (UMASS), Division of Plant Sciences, College of Life Sciences, University of Dundee, Department of Entomology and Plant Pathology, The University of Tennessee [Knoxville], Agriculture and Agri-Food [Ottawa] (AAFC), Department of Botany and Plant Pathology, Oregon State University (OSU), USDA-ARS : Agricultural Research Service, University of Alabama at Birmingham [ Birmingham] (UAB), University of Warwick [Coventry], National Pollen and Aerobiology Research Unit, Worcester State University [Worcester], Plant-Microbe Interactions, Department of Biology, Utrecht University [Utrecht], Department of Plant Pathology, Physiology, and Weed Science [Blacksburg] (PPPWS), Virginia Tech [Blacksburg], University of Manitoba [Winnipeg], Cornell University [New York], International Potato Center [Lima] (CIP), Consultative Group on International Agricultural Research [CGIAR] (CGIAR), Laboratory of Phytopathology, Wageningen University and Research [Wageningen] (WUR), Interactions Arbres-Microorganismes (IAM), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), North Carolina A&T State University, University of North Carolina System (UNC), European Research Council (ERC), UK Biotechnology and Biological Sciences Research Council (BBSRC), Gatsby Charitable Foundation, National Council for Scientific and Technological Development (CNPq/CsF Brazil) (313139/2013-0), Conoscenze Integrate per Sostenibilita ed Innovazione del Made in Italy Agroalimentare (CISIA-MIUR), Italian Ministry of Education, University and Research (MIUR) (FIRB 2010-RBFR10PZ4N), Portuguese Foundation for Science and Technology (SFRH/BPD/63641/2009), National Natural Science Foundation of China (31101395), Jiangsu Province Basic Research Program (Natural Science Foundation) of China (BK2011443), Agriculture and Food Research Institute of the National Institute of Food and Agriculture of the US Department of Agriculture (2011-68004-30154, 2011-68004-30104), Agriculture and Agri-Food Canada GRDI program, US Department of Agriculture National Institute of Food and Agriculture (2011-68004-30154), National Research Initiative Competitive Grants Program (2008-35600-18780), US Department of Agriculture Agricultural Research Service (CRIS 5358-22000-039-00D), Northwest Center for Nursery Crop Research, US Forest Service, US Department of Agriculture Agricultural Research Service Floriculture Nursery Initiative, Oregon Department of Agriculture/Oregon Association of Nurseries, UK Biotechnology and Biological Sciences Research Council (BB/G015066/1), US Department of Agriculture-Agriculture and Food Research Initiative (2009-03008, 2011-68004), National Science Foundation (ABI-1146819), Virginia Tech Institute for Critical Technology and Applied Sciences, Natural Sciences and Engineering Research Council of Canada (NSERC), Manitoba Agri-Food Research and Development Initiative (MB-ARDI), McCain Foods, Keystone Potato Producers Association (KPPA), Peak of the Market, Dutch Technology Foundation STW-NWO (VIDI) (10281), INRA Contrat Jeune Scientifique, Food for Thought Program, Wageningen University Fund, European Project: 267196,EC:FP7:PEOPLE,FP7-PEOPLE-2010-COFUND,AGREENSKILLS(2012), University of California [Riverside] (UC Riverside), University of California (UC)-University of California (UC), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Universidade de Lisboa = University of Lisbon (ULISBOA), and Agriculture and Agri-Food (AAFC)

Farid Abd-El-Kareem, Sergio Molinari, W. M. A. El-Nagdi, Sanaa S. A. Kabeil, Moawad M. Mohamad, Marie-Claire Kerlan, Mahfouz M. M. Abd-Elgawad, National Research Center, Institut de Génétique, Environnement et Protection des Plantes (IGEPP), Institut National de la Recherche Agronomique (INRA)-Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-AGROCAMPUS OUEST, Istituto per la Protezione Sostenibile delle Piante (CNR), Alexandria University [Alexandrie], Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Institut National de la Recherche Agronomique (INRA)-Université de Rennes (UR)-AGROCAMPUS OUEST, CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), and National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR)

Francis Martin, Annegret Kohler, Claude Murat, Raffaella Balestrini, Pedro M. Coutinho, Olivier Jaillon, Barbara Montanini, Emmanuelle Morin, Benjamin Noel, Riccardo Percudani, Bettina Porcel, Andrea Rubini, Antonella Amicucci, Joelle Amselem, Véronique Anthouard, Sergio Arcioni, François Artiguenave, Jean-Marc Aury, Paola Ballario, Angelo Bolchi, Andrea Brenna, Annick Brun, Marc Buée, Brandi Cantarel, Gérard Chevalier, Arnaud Couloux, Corinne Da Silva, France Denoeud, Sébastien Duplessis, Stefano Ghignone, Benoît Hilselberger, Mirco Iotti, Benoît Marçais, Antonietta Mello, Michele Miranda, Giovanni Pacioni, Hadi Quesneville, Claudia Riccioni, Roberta Ruotolo, Richard Splivallo, Vilberto Stocchi, Emilie Tisserant, Arturo Roberto Viscomi, Alessandra Zambonelli, Elisa Zampieri, Bernard Henrissat, Marc-Henri Lebrun, Francesco Paolocci, Paola Bonfante, Simone Ottonello, Patrick Wincker, Interactions Arbres-Microorganismes (IAM), Université de Lorraine (UL)-Institut National de la Recherche Agronomique (INRA), Istituto per la Protezione Sostenibile delle Piante (CNR-IPSP), UOS Torino, Architecture et fonction des Macromolécules Biologiques - UMR 6098 (AFMB), Université de Provence - Aix-Marseille 1-Centre National de la Recherche Scientifique (CNRS), Genoscope - Centre national de séquençage [Evry] (GENOSCOPE), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay, Dipartimento di Biochimica e Biologia Molecolare, Università degli studi di Parma [Parme, Italie], Chimie Et Interdisciplinarité : Synthèse, Analyse, Modélisation (CEISAM), Université de Nantes - Faculté des Sciences et des Techniques, Université de Nantes (UN)-Université de Nantes (UN)-Centre National de la Recherche Scientifique (CNRS), Consiglio Nazionale delle Ricerche [Milano] (CNR), Dipartimento di Scienze Biomolecolari Universita di Urbino (DISB), Università degli Studi di Urbino 'Carlo Bo', Institut National de la Recherche Agronomique (INRA), Génomique métabolique (UMR 8030), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Université d'Évry-Val-d'Essonne (UEVE), Dipartimento di Genetica e Biologia Molecolare, Università degli Studi di Roma 'La Sapienza' [Rome], Université Blaise Pascal - Clermont-Ferrand 2 (UBP), Università degli Studi di Bologna, Dipartimento di Biologia Vegetale, Università degli studi di Torino (UNITO), Dipartimento di Biologia di Base ed Applicata, Aquila University, Università degli Studi dell'Aquila [L'Aquila] (UNIVAQ.IT), Unité de Recherche Génomique Info (URGI), CNR IGV, Consiglio Nazionale delle Ricerche (CNR), University of Goettingen, Consiglio Nazionale delle Ricerche [Torino] (CNR), Architecture et fonction des macromolécules biologiques (AFMB), Institut National de la Recherche Agronomique (INRA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS), BIOlogie et GEstion des Risques en agriculture (BIOGER), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Istituto di Scienze e Tecnologie Molecolari = Institute of Molecular Science and Technologies (ISTM-CNR [Perugia - Milano]), ANR-06-BLAN-0399,FungEffector,A genome-wide survey of secreted proteins as effectors of symbiosis and pathogenicity in plant-associated fungi(2006), European Project: 33958,EVOLTREE, Martin, Francis, Murat-Furminieux, Claude, Martin F., Kohler A., Murat C., Balestrini R., Coutinho P.M., Jaillon O., Montanini B., Morin E., Noel B., Percudani R., Porcel B., Rubini A., Amicucci A., Amselem J., Anthouard V., Arcioni S., Artiguenave F., Aury J.M., Ballario P., Bolchi A., Brenna A., Brun A., Buée M., Cantarel B., Chevalier G., Couloux A., Da Silva C., Denoeud F., Duplessis S., Ghignone S., Hilselberger B., Iotti M., Mello M., Miranda M., Pacioni G., Quesneville H., Riccioni C., Ruotolo R., Splivallo R., Stocchi V., Tisserant E., Viscomi A.R., Zambonelli A., Zampieri E., Henrissat B., Lebrun M.H., Paolocci F., Bonfante P., Ottonello S., Wincker P., Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Università degli studi di Parma = University of Parma (UNIPR), Université de Nantes - UFR des Sciences et des Techniques (UN UFR ST), Université de Nantes (UN)-Université de Nantes (UN)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), Università degli Studi di Roma 'La Sapienza' = Sapienza University [Rome] (UNIROMA), Alma Mater Studiorum Università di Bologna [Bologna] (UNIBO), Università degli studi di Torino = University of Turin (UNITO), Università degli Studi dell'Aquila = University of L'Aquila (UNIVAQ), Georg-August-University = Georg-August-Universität Göttingen, Centre National de la Recherche Scientifique (CNRS)-Université de Provence - Aix-Marseille 1, University of Parma = Università degli studi di Parma [Parme, Italie], Université de Nantes (UN)-Université de Nantes (UN)-Centre National de la Recherche Scientifique (CNRS)-Institut de Chimie du CNRS (INC), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS)-Université d'Évry-Val-d'Essonne (UEVE), Università degli Studi di Roma 'La Sapienza' = Sapienza University [Rome], Università degli Studi dell'Aquila (UNIVAQ), University of Göttingen - Georg-August-Universität Göttingen, Centre National de la Recherche Scientifique (CNRS)-Aix Marseille Université (AMU)-Institut National de la Recherche Agronomique (INRA), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), and AgroParisTech-Institut National de la Recherche Agronomique (INRA)