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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification

Authors :
Adriaenssens, Evelien
Roux, Simon
Brister, J. Rodney
Karsch-Mizrachi, Ilene
Kuhn, Jens
Varsani, Arvind
Yigang, Tong
Reyes, Alejandro
Lood, Cédric
Lefkowitz, Elliot
Sullivan, Matthew
Edwards, Robert
Simmonds, Peter
Rubino, Luisa
Sabanadzovic, Sead
Krupovic, Mart
Dutilh, Bas
Quadram Institute
Biotechnology and Biological Sciences Research Council (BBSRC)
Lawrence Berkeley National Laboratory [Berkeley] (LBNL)
National Center for Biotechnology Information (NCBI)
Integrated Research Facility at Fort Detrick (IRF-Frederick)
National Institute of Allergy and Infectious Diseases [Bethesda] (NIAID-NIH)
National Institutes of Health [Bethesda] (NIH)-National Institutes of Health [Bethesda] (NIH)
Arizona State University [Tempe] (ASU)
University of Cape Town
Beijing University of Chemical Technology
Universidad de los Andes [Bogota] (UNIANDES)
Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven)
Friedrich-Schiller-Universität = Friedrich Schiller University Jena [Jena, Germany]
University of Alabama at Birmingham [ Birmingham] (UAB)
Ohio State University [Columbus] (OSU)
Flinders University [Adelaide, Australia]
University of Oxford
CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia] (IPSP)
National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR)
Mississippi State University [Mississippi]
Virologie des archées - Archaeal Virology
Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047)
Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)
Utrecht University [Utrecht]
E.M.A. gratefully acknowledges the support of the Biotechnology and Biological Sciences Research Council (BBSRC)
this research was funded by the BBSRC Institute Strategic Program Gut Microbes and Health BB/R012490/1 and its constituent projects BBS/E/F/000PR10353 and BBS/E/F/000PR10356. The work conducted by the US Department of Energy (DOE) Joint Genome Institute (S.R.) was supported by the Office of Science of the DOE under contract no. DE-AC02-05CH11231. Work by J.R.B. and I.K.M. was supported by the National Center for Biotechnology Information of the National Library of Medicine (NLM), NIH. This work was supported in part through Laulima Government Solutions, LLC, prime contract with the NIAID under contract no. HHSN272201800013C. J.H.K. performed this work as an employee of Tunnell Government Services (TGS), a subcontractor of Laulima Government Solutions, LLC, under Contract No. HHSN272201800013C. M.B.S. was supported by the US National Science Foundation Award #1759874. R.A.E. was supported by the National Institute of Diabetes and Digestive and Kidney Diseases of the NIH under award no. RC2DK116713 and by the Australian Research Council under award no. DP220102915. C.L. was supported by a Postdoctoral Mandate from KU Leuven (PDMt2/21/038) and the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany’s Excellence Strategy – EXC 2051 – Project-ID 390713860. E.J.L. was supported by the NIAID, NIH, under award no. U24AI162625. P.S. was supported by a Wellcome Trust Biomedical Resource grant (WT108418AIA). S.S. acknowledges support from the Mississippi Agricultural and Forestry Experiment Station (MAFES), US Department of Agriculture (USDA)–Agricultural Research Service project 58-6066-9-033, and the National Institute of Food and Agriculture, USDA, Hatch Project, under accession USDA 1021494. B.E.D. was supported by the European Research Council (ERC) Consolidator Grant 865694: DiversiPHI, the DFG under Germany’s Excellence Strategy – EXC 2051 – Project-ID 390713860, the Alexander von Humboldt Foundation in the context of an Alexander von Humboldt Professorship founded by German Federal Ministry of Education and Research, and the European Union’s Horizon 2020 research and innovation program, under Marie Skłodowska-Curie Actions Innovative Training Networks grant agreement no. 955974 (VIROINF).
Source :
Nature Biotechnology, Nature Biotechnology, 2023, 41 (7), pp.898-902. ⟨10.1038/s41587-023-01844-2⟩
Publication Year :
2023
Publisher :
HAL CCSD, 2023.

Details

Language :
English
ISSN :
10870156
Database :
OpenAIRE
Journal :
Nature Biotechnology, Nature Biotechnology, 2023, 41 (7), pp.898-902. ⟨10.1038/s41587-023-01844-2⟩
Accession number :
edsair.od......2100..3c82c6ef3b834aebfae7cefdb2a8397b