61 results on '"Brian Kirmse"'
Search Results
2. Phenotypic continuum of NFU1‐related disorders
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Rauan Kaiyrzhanov, Maha S. Zaki, Tracy Lau, Sambuddha Sen, Reza Azizimalamiri, Mina Zamani, Gözde Yeşil Sayin, Taru Hilander, Stephanie Efthymiou, Viorica Chelban, Ruth Brown, Kyle Thompson, Maria Irene Scarano, Jaya Ganesh, Kairgali Koneev, Ismail Musab Gülaçar, Richard Person, Dinara Sadykova, Yerdan Maidyrov, Tahereh Seifi, Aizhan Zadagali, Geneviève Bernard, Katrina Allis, Houda Zghal Elloumi, Amanda Lindy, Ehsan Taghiabadi, Sumit Verma, Rachel Logan, Brian Kirmse, Renkui Bai, Shaimaa M. Khalaf, Mohamed S. Abdel‐Hamid, Alireza Sedaghat, Gholamreza Shariati, Mahmoud Issa, Jawaher Zeighami, Hasnaa M. Elbendary, Garry Brown, Robert W. Taylor, Hamid Galehdari, Joseph J. Gleeson, Christopher J. Carroll, James A. Cowan, Andres Moreno‐De‐Luca, Henry Houlden, and Reza Maroofian
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Bi‐allelic variants in Iron–Sulfur Cluster Scaffold (NFU1) have previously been associated with multiple mitochondrial dysfunctions syndrome 1 (MMDS1) characterized by early‐onset rapidly fatal leukoencephalopathy. We report 19 affected individuals from 10 independent families with ultra‐rare bi‐allelic NFU1 missense variants associated with a spectrum of early‐onset pure to complex hereditary spastic paraplegia (HSP) phenotype with a longer survival (16/19) on one end and neurodevelopmental delay with severe hypotonia (3/19) on the other. Reversible or irreversible neurological decompensation after a febrile illness was common in the cohort, and there were invariable white matter abnormalities on neuroimaging. The study suggests that MMDS1 and HSP could be the two ends of the NFU1‐related phenotypic continuum.
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- 2022
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3. Parasitic Disease Surveillance, Mississippi, USA
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Richard S. Bradbury, Meredith Lane, Irene Arguello, Sukwan Handali, Gretchen Cooley, Nils Pilotte, John M. Williams, Sam Jameson, Susan P. Montgomery, Kathryn Hellmann, Michelle Tharp, Lisa Haynie, Regina Galloway, Bruce Brackin, Brian Kirmse, Lisa Stempak, Paul Byers, Steven Williams, Fazlay Faruque, and Charlotte V. Hobbs
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Soil-transmitted helminths ,Strongyloides ,strongyloidiasis ,Toxocara ,toxocariasis ,Cryptosporidium ,Medicine ,Infectious and parasitic diseases ,RC109-216 - Abstract
Surveillance for soil-transmitted helminths, strongyloidiasis, cryptosporidiosis, and giardiasis was conducted in Mississippi, USA. PCR performed on 224 fecal samples for all soil-transmitted helminths and on 370 samples for only Necator americanus and Strongyloides stercoralis identified 1 S. stercoralis infection. Seroprevalences were 8.8% for Toxocara, 27.4% for Cryptosporidium, 5.7% for Giardia, and 0.2% for Strongyloides parasites.
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- 2021
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4. Loss of function mutations in GEMIN5 cause a neurodevelopmental disorder
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Sukhleen Kour, Deepa S. Rajan, Tyler R. Fortuna, Eric N. Anderson, Caroline Ward, Youngha Lee, Sangmoon Lee, Yong Beom Shin, Jong-Hee Chae, Murim Choi, Karine Siquier, Vincent Cantagrel, Jeanne Amiel, Elliot S. Stolerman, Sarah S. Barnett, Margot A. Cousin, Diana Castro, Kimberly McDonald, Brian Kirmse, Andrea H. Nemeth, Dhivyaa Rajasundaram, A. Micheil Innes, Danielle Lynch, Patrick Frosk, Abigail Collins, Melissa Gibbons, Michele Yang, Isabelle Desguerre, Nathalie Boddaert, Cyril Gitiaux, Siri Lynne Rydning, Kaja K. Selmer, Roser Urreizti, Alberto Garcia-Oguiza, Andrés Nascimento Osorio, Edgard Verdura, Aurora Pujol, Hannah R. McCurry, John E. Landers, Sameer Agnihotri, E. Corina Andriescu, Shade B. Moody, Chanika Phornphutkul, Maria J. Guillen Sacoto, Amber Begtrup, Henry Houlden, Janbernd Kirschner, David Schorling, Sabine Rudnik-Schöneborn, Tim M. Strom, Steffen Leiz, Kali Juliette, Randal Richardson, Ying Yang, Yuehua Zhang, Minghui Wang, Jia Wang, Xiaodong Wang, Konrad Platzer, Sandra Donkervoort, Carsten G. Bönnemann, Matias Wagner, Mahmoud Y. Issa, Hasnaa M. Elbendary, Valentina Stanley, Reza Maroofian, Joseph G. Gleeson, Maha S. Zaki, Jan Senderek, and Udai Bhan Pandey
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Science - Abstract
GEMIN5, an RNA-binding protein, is required for formation of small nuclear ribonucleoproteins. Here, the authors identify loss of function mutations in GEMIN5 that are associated with a human neurodevelopmental disorder.
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- 2021
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5. LPIN1 rhabdomyolysis: A single site cohort description and treatment recommendations
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Navya Kanderi, Brian Kirmse, Debra S. Regier, and Kimberly A. Chapman
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LPIN1 ,Rhabdomyolysis ,Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
Individuals with LPIN1 deficiency have early recurrent, life-threatening rhabdomyolysis but the full phenotypic spectrum and optimal treatment of the disorder remains unknown. Here we report the clinical details and treatment outcomes of 6 patients from our health system. The average age of presentation in our cohort was 23.8 months ±11.6 months (range 15–46 months). The average number of days for each hospitalization for this cohort is 11.7±13.2 days. Creatinine kinase (CK) levels peak during our care averaged 607,725 units/L (range 157,000-1,100,000 units/L). We observed that aspartate aminotransferase levels paralleled the CK levels in its elevation and resolution (Pearson's correlation R = 0.995); while alanine aminotransferase paralleled the elevation but lagged in the resolution of CK levels (R = 0.728). Unlike historical accounts, in our patient population, rhabdomyolysis was sometimes seen without inciting viral or traumatic events. We also cared for multiple individuals that had received treatment at other centers. This allowed us to compare multiple practice approaches and led to a standardized Care Recommendations.
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- 2022
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6. Autosomal Recessive Cerebellar Atrophy and Spastic Ataxia in Patients With Pathogenic Biallelic Variants in GEMIN5
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Deepa S. Rajan, Sukhleen Kour, Tyler R. Fortuna, Margot A. Cousin, Sarah S. Barnett, Zhiyv Niu, Dusica Babovic-Vuksanovic, Eric W. Klee, Brian Kirmse, Micheil Innes, Siri Lynne Rydning, Kaja K. Selmer, Magnus Dehli Vigeland, Anne Kjersti Erichsen, Andrea H. Nemeth, Francisca Millan, Catherine DeVile, Katherine Fawcett, Adrien Legendre, David Sims, Ricardo Parolin Schnekenberg, Lydie Burglen, Sandra Mercier, Somayeh Bakhtiari, Rosario Francisco-Velilla, Azman Embarc-Buh, Encarnacion Martinez-Salas, Kristen Wigby, Jerica Lenberg, Jennifer R. Friedman, Michael C. Kruer, and Udai Bhan Pandey
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Gemin5 ,ataxia ,cerebellar atrophy ,developmental delay ,neurodegeneration ,cell death ,Biology (General) ,QH301-705.5 - Abstract
The hereditary ataxias are a heterogenous group of disorders with an increasing number of causative genes being described. Due to the clinical and genetic heterogeneity seen in these conditions, the majority of such individuals endure a diagnostic odyssey or remain undiagnosed. Defining the molecular etiology can bring insights into the responsible molecular pathways and eventually the identification of therapeutic targets. Here, we describe the identification of biallelic variants in the GEMIN5 gene among seven unrelated families with nine affected individuals presenting with spastic ataxia and cerebellar atrophy. GEMIN5, an RNA-binding protein, has been shown to regulate transcription and translation machinery. GEMIN5 is a component of small nuclear ribonucleoprotein (snRNP) complexes and helps in the assembly of the spliceosome complexes. We found that biallelic GEMIN5 variants cause structural abnormalities in the encoded protein and reduce expression of snRNP complex proteins in patient cells compared with unaffected controls. Finally, knocking out endogenous Gemin5 in mice caused early embryonic lethality, suggesting that Gemin5 expression is crucial for normal development. Our work further expands on the phenotypic spectrum associated with GEMIN5-related disease and implicates the role of GEMIN5 among patients with spastic ataxia, cerebellar atrophy, and motor predominant developmental delay.
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- 2022
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7. Associations of FGF21 and GDF15 with mitochondrial dysfunction in children living with perinatally-acquired HIV: A cross-sectional evaluation of pediatric AIDS clinical trials group 219/219C
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Greg S. Gojanovich, Denise L. Jacobson, Carly Broadwell, Brad Karalius, Brian Kirmse, Mitchell E. Geffner, Jennifer Jao, Russell B. Van Dyke, Elizabeth J. McFarland, Margarita Silio, Marilyn Crain, Mariana Gerschenson, and for the Pediatric HIV/AIDS Cohort Study
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Medicine ,Science - Abstract
Background In persons living with HIV, mitochondrial disease (MD) is difficult to diagnose, as clinical signs are non-specific with inconsistent patterns. Fibroblast growth factor 21 (FGF21) and growth differentiation factor 15 (GDF15) are mitokines elevated in MD patients without HIV, and associated with cardiometabolic comorbidities in adults living with HIV. We assessed relationships of these biomarkers with MD in children living with perinatally-acquired HIV infection (CPHIV). Setting Cross-sectional study of CPHIV from Pediatric ACTG 219/219C classified by Mitochondrial Disease Criteria (MDC) that defines scores 2–4 as “possible” MD. Methods Each case with MDC equaling 4 (MDC4; n = 23) was matched to one randomly selected control displaying no MDC (MDC0; n = 23) based on calendar date. Unmatched cases with MDC equaling 3 (MDC3; n = 71) were also assessed. Plasma samples proximal to diagnoses were assayed by ELISA. Mitokine distributions were compared using Wilcoxon tests, Spearman correlations were calculated, and associations with MD status were assessed by conditional logistic regression. Results Median FGF21 and GDF15 concentrations, respectively, were highest in MDC4 (143.9 and 1441.1 pg/mL), then MDC3 (104.0 and 726.5 pg/mL), and lowest in controls (89.4 and 484.7 pg/mL). Distributions of FGF21 (paired Wilcoxon rank sum p = 0.002) and GDF15 (paired Wilcoxon rank sum pConclusion FGF21 and GDF15 levels may be useful biomarkers to screen for CPHIV with mitochondrial dysfunction.
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- 2021
8. Plasma fibroblast growth factor-21 levels in patients with inborn errors of metabolism
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Brian Kirmse, Juan Cabrerra-Luque, Omar Ayyub, Kristina Cusmano, Kimberly Chapman, and Marshall Summar
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Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
Fibroblast growth factor-21 (FGF21) levels are elevated in patients with primary mitochondrial disorders but have not been studied in patients with inborn errors of metabolism (IEM) known to have secondary mitochondrial dysfunction. We measured plasma FGF21 by ELISA in patients with and without IEM. FGF21 levels were higher in patients with IEM compared to without IEM (370 pg/dL vs. 0–65 pg/dL). Further study of FGF21 as a biomarker in IEM is warranted.
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- 2017
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9. Concurrent non-ketotic hyperglycinemia and propionic acidemia in an eight year old boy
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Paul S. Kruszka, Brian Kirmse, Dina J. Zand, Kristina Cusmano-Ozog, Elaine Spector, Johan L. Van Hove, and Kimberly A. Chapman
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Propionic acidemia ,Non-ketotic hyperglycinemia ,Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
This is the first reported case of a patient with both non-ketotic hyperglycinemia and propionic acidemia. At 2 years of age, the patient was diagnosed with non-ketotic hyperglycinemia by elevated glycine levels and mutations in the GLDC gene (paternal allele: c.1576_1577insC delT and c.1580delGinsCAA; p.S527Tfs*13, and maternal allele: c.1819G>A; p.G607S). At 8 years of age after having been placed on ketogenic diet, he became lethargic and had severe metabolic acidosis with ketonuria. Urine organic acid analysis and plasma acylcarnitine profile were consistent with propionic acidemia. He was found to have an apparently homozygous mutation in the PCCB gene: c.49C>A; p.Leu17Met. The patient was also treated with natural protein restriction, carnitine, biotin, and thiamine and had subjective and biochemical improvement.
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- 2014
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10. Malaria in HIV-Infected Children Receiving HIV Protease-Inhibitor- Compared with Non-Nucleoside Reverse Transcriptase Inhibitor-Based Antiretroviral Therapy, IMPAACT P1068s, Substudy to P1060.
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Charlotte V Hobbs, Erin E Gabriel, Portia Kamthunzi, Gerald Tegha, Jean Tauzie, Elizabeth Petzold, Linda Barlow-Mosha, Benjamin H Chi, Yonghua Li, Tiina Ilmet, Brian Kirmse, Jillian Neal, Sunil Parikh, Nagamah Deygoo, Patrick Jean Philippe, Lynne Mofenson, William Prescott, Jingyang Chen, Philippa Musoke, Paul Palumbo, Patrick E Duffy, William Borkowsky, and P1068s Study Team
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Medicine ,Science - Abstract
BackgroundHIV and malaria geographically overlap. HIV protease inhibitors kill malaria parasites in vitro and in vivo, but further evaluation in clinical studies is needed.MethodsThirty-one children from Malawi aged 4-62 months were followed every 3 months and at intercurrent illness visits for ≤47 months (September 2009-December 2011). We compared malaria parasite carriage by blood smear microscopy (BS) and confirmed clinical malaria incidence (CCM, or positive BS with malaria symptoms) in children initiated on HIV antiretroviral therapy (ART) with zidovudine, lamivudine, and either nevirapine (NVP), a non-nucleoside reverse transcriptase inhibitor, or lopinavir-ritonavir (LPV-rtv), a protease inhibitor.ResultsWe found an association between increased time to recurrent positive BS, but not CCM, when anti-malarial treatment and LPV-rtv based ART were used concurrently and when accounting for a LPV-rtv and antimalarial treatment interaction (adjusted HR 0.39; 95% CI (0.17,0.89); p = 0.03).ConclusionsLPV-rtv in combination with malaria treatment was associated with lower risk of recurrent positive BS, but not CCM, in HIV-infected children. Larger, randomized studies are needed to confirm these findings which may permit ART optimization for malaria-endemic settings.Trial registrationClinicalTrials.gov NCT00719602.
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- 2016
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11. Acylcarnitines and Genetic Variation in Fat Oxidation Genes in HIV-infected, Antiretroviral-treated Children With and Without Myopathy
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Brian, Kirmse, Charlotte, Hobbs, Lisa, Aaron, Grace, Montepiedra, Marshall, Summar, Paige L, Williams, Caitlin J, Smith, Russell, Van Dyke, Chunli, Yu, Kelli K, Ryckman, William, Borkowsky, and Anai, Cuadra
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Microbiology (medical) ,Anti-HIV Agents ,Genetic Variation ,HIV Infections ,Infectious Diseases ,Anti-Retroviral Agents ,Muscular Diseases ,Carnitine ,Pediatrics, Perinatology and Child Health ,Humans ,Reverse Transcriptase Inhibitors ,Child ,Solute Carrier Family 22 Member 5 ,Oxidation-Reduction - Abstract
Mitochondrial toxicity resulting in myopathy and lactic acidosis has been described in antiretroviral (ARV)-exposed patients. We hypothesized that myopathy in HIV-infected, ARV-treated children would be associated with metabolic (acylcarnitines) and genetic (variants in metabolic genes) markers of dysfunctional fatty acid oxidation (FAO).Acylcarnitine profiles (ACP) were analyzed for 74 HIV-infected children on nucleoside reverse transcriptase inhibitor (NRTI)-containing ARV. Thirty-seven participants with ≥2 creatine kinase measurements500 IU (n = 18) or evidence of echocardiographic cardiomyopathy (n = 19) were matched with 37 participants without myopathy. Single nucleotide polymorphisms (SNPs) in FAO genes were also evaluated.Abnormal ACP was 73% (95% CI: 56%-86%) and 62% (95% CI: 45%-78%) in the myopathic and nonmyopathic groups, respectively. No significant association was found between myopathy and having an abnormal ACP (OR = 2.10, P = 0.22). In univariate analysis, a 1-year increase in NRTI use was associated with a 20% increase in odds of at least 1 ACP abnormality [OR (95% CI) = 1.20 (1.03-1.41); P = 0.02), and a 1-year increase in protease inhibitor use was associated with 28% increase in the odds of having at least 1 ACP abnormality [OR (95% CI) = 1.28 (1.07-1.52); P = 0.006). Three SNPs, all in the gene for the carnitine transporter ( SLC22A5 ), were associated with the cardiomyopathy phenotype.FAO appears to be altered in HIV-infected children with and without myopathy, but abnormal FAO does not fully explain myopathy in ARV-exposed children. Further study of SLC22A5 variation in ARV-exposed people is warranted carnitine transporter dysfunction-related cardiomyopathy may be treatable.
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- 2023
12. Metabolomics in Placental Tissue from Women Living with HIV
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Timothy Visclosky, Huda B. Al-Kouatly, Mona Makhamreh, Kengo Inagaki, Natella Rakhmanina, Rachel K. Scott, Gary Cunningham, Brian Ingram, and Brian Kirmse
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Anti-HIV Agents ,Placenta ,Immunology ,Human immunodeficiency virus (HIV) ,HIV Infections ,Pharmacology ,medicine.disease_cause ,Outcomes Research ,Metabolomics ,Fat oxidation ,Pregnancy ,Virology ,medicine ,Humans ,chemistry.chemical_classification ,business.industry ,Infant, Newborn ,Placental tissue ,virus diseases ,medicine.disease ,Amino acid ,Mitochondrial toxicity ,Infectious Diseases ,Anti-Retroviral Agents ,chemistry ,Female ,business - Abstract
It is unknown whether antiretroviral (ARV) drugs in women living with HIV (WLHIV) are associated with mitochondrial toxicity and altered fat oxidation and branched-chain amino acid metabolism in the placenta and fetus. Immediately after delivery, we froze placental biopsies from 20 WLHIV and 20 matched uninfected women. We analyzed global biochemical profiles using high-performance liquid chromatography/tandem mass spectrometry and gas chromatography/mass spectrometry. We used t-tests, principle component analysis, hierarchical clustering, and random forest analysis (RFA) in our analysis. Twelve WLHIV were on protease inhibitors, six on non-nucleoside reverse inhibitors, and two on integrase strand inhibitors with optimized backbone. Mean birth weight of HIV-exposed neonates was significantly lower than unexposed neonates (3,075 g vs. 3,498 g, p = .01) at similar gestational age. RFA identified 30 of 702 analytes that differentiated the placental profiles of WLHIV from uninfected women with 72.5% predictive accuracy. Placental profiles of non-nucleoside reverse transcriptase inhibitor (NNRTI)-treated WLHIV exhibited lower levels of amino acids, including essential and branched-chain amino acids, and some medium-chain acylcarnitines. Placental metabolism may be altered in WLHIV, possibly associated with ARV exposure. The lower birth weight among neonates of WLHIV suggests the need for further studies considering potential deleterious effects of altered placenta metabolism on fetal growth and development.
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- 2022
13. TNPO2 variants associate with human developmental delays, neurologic deficits, and dysmorphic features and alter TNPO2 activity in Drosophila
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David A. Koolen, Yue Si, Benjamin Cogné, Pamela Trapane, Eric W. Klee, Manju A. Kurian, Miel Theunis, Eva Morava, Shekeeb S. Mohammad, Oguz Kanca, Matthew J. Moulton, Paulien A Terhal, Peggy Kulch, Queenie K.-G. Tan, An-Chi Tien, Shenzhao Lu, Erica L. Macke, Hugo J. Bellen, Katy Barwick, Bryan E. Hainline, Russell C. Dale, Lindsey D. Goodman, Katherine Sapp, Hermine E. Veenstra-Knol, Eric Legius, Amber Begtrup, Dora Steel, D. Dutta, Victoria H. Klee, Christopher J. Spencer, Bethany Robinette, Ellen van Binsbergen, Michael F. Wangler, Laurence E. Walsh, Shinya Yamamoto, Thomas A. Ravenscroft, Brian Kirmse, Bertrand Isidor, Marijke R. Wevers, Zelha Nil, Heidi Cope, Theresa A. Grebe, Melissa Jones, Wu Lin Charng, Rolph Pfundt, Jolien S. Klein Wassink-Ruiter, and Charlotte A. Haaxma
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Male ,Developmental Disabilities ,Gene Dosage ,DE-NOVO ,medicine.disease_cause ,NUCLEAR-IMPORT ,Drosophila Proteins ,Global developmental delay ,RNA, Small Interfering ,Genetics (clinical) ,Neurons ,Genetics ,Mutation ,Gene Expression Regulation, Developmental ,Eye Diseases, Hereditary ,GAL4 SYSTEM ,Disorders of movement Donders Center for Medical Neuroscience [Radboudumc 3] ,beta Karyopherins ,Phenotype ,Drosophila melanogaster ,Essential gene ,Female ,Beta Karyopherins ,Drosophila Protein ,Rare cancers Radboud Institute for Health Sciences [Radboudumc 9] ,EXPRESSION ,C-FOS ,PROTEINS ,Karyopherins ,Biology ,Article ,All institutes and research themes of the Radboud University Medical Center ,Intellectual Disability ,medicine ,Animals ,Humans ,Amino Acid Sequence ,Alleles ,Neurodevelopmental disorders Donders Center for Medical Neuroscience [Radboudumc 7] ,COMPLEX ,Sequence Homology, Amino Acid ,Whole Genome Sequencing ,Genome, Human ,MUTATIONS ,Infant, Newborn ,Infant ,biology.organism_classification ,MUSHROOM BODY ,TRANSPORTIN ,Musculoskeletal Abnormalities ,ran GTP-Binding Protein ,Ectopic expression ,Sequence Alignment - Abstract
Transportin-2 (TNPO2) mediates multiple pathways including non-classical nucleocytoplasmic shuttling of >60 cargoes, such as developmental and neuronal proteins. We identified 15 individuals carrying de novo coding variants in TNPO2 who presented with global developmental delay (GDD), dysmorphic features, ophthalmologic abnormalities, and neurological features. To assess the nature of these variants, functional studies were performed in Drosophila. We found that fly dTnpo (orthologous to TNPO2) is expressed in a subset of neurons. dTnpo is critical for neuronal maintenance and function as downregulating dTnpo in mature neurons using RNAi disrupts neuronal activity and survival. Altering the activity and expression of dTnpo using mutant alleles or RNAi causes developmental defects, including eye and wing deformities and lethality. These effects are dosage dependent as more severe phenotypes are associated with stronger dTnpo loss. Interestingly, similar phenotypes are observed with dTnpo upregulation and ectopic expression of TNPO2, showing that loss and gain of Transportin activity causes developmental defects. Further, proband-associated variants can cause more or less severe developmental abnormalities compared to wild-type TNPO2 when ectopically expressed. The impact of the variants tested seems to correlate with their position within the protein. Specifically, those that fall within the RAN binding domain cause more severe toxicity and those in the acidic loop are less toxic. Variants within the cargo binding domain show tissue-dependent effects. In summary, dTnpo is an essential gene in flies during development and in neurons. Further, proband-associated de novo variants within TNPO2 disrupt the function of the encoded protein. Hence, TNPO2 variants are causative for neurodevelopmental abnormalities.
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- 2021
14. Further delineation of BCAP31-linked intellectual disability: description of 17 new families with LoF and missense variants
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Glen D. Thomson, Olga Calabrese, Hong Cui, Sandra Chantot Bastaraud, Frances Elmslie, Renee Carroll, Agnès Guët, Sandra Whalen, Anne Slavotinek, Thierry Billette de Villemeur, Vishal Kumar, Brian Kirmse, Patrick Yap, Elise Brischoux-Boucher, Florence Riccardi, Jenny Morton, Carroll Jennifer, Jonathan Levy, Manoelle Kossorotoff, Alessandro Mauro Spinelli, Elisabeth Forsythe, Annelies Dheedene, Anne McCabe, Cecile Cieuta Walti, Jozef Gecz, Anne Claude Tabet, Laurent Villard, Cyril Mignot, Kristen V. Truxal, Jessica N. Hartley, Annick Raas-Rothschild, Jillian R Ozmore, Marie Shaw, Jan Liebelt, Delphine Héron, Patrick Frosk, Benjamin Kamien, Jane A. Hurst, Antonella Pini, UF de Génétique Clinique et Centre de Reference Anomalies du Développement et Syndromes Malformatifs, Sorbonne Université (SU), University of Adelaide, Hôpital Trousseau, Centre Hospitalier Régional Universitaire de Tours (CHRU Tours), Université de Sherbrooke (UdeS), Women’s and Children’s Hospital [Adelaide], St George’s University Hospitals, Genetic Health Service New Zealand, Great Ormond Street Hospital for Children NHS Foundation Trust, Partenaires INRAE, University of Mississippi Medical Center (UMMC), Dartmouth Hitchcock Medical Center, University of Modena and Reggio Emilia, Hôpital Robert Debré, Hôpital Louis Mourier - AP-HP [Colombes], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Hôpital Necker, King-Edward Memorial Hospital, Perth, Australia., Birmingham Women’s and Children’s Hospitals NHS Foundation Trust, Université de Franche-Comté (UFC), Université Bourgogne Franche-Comté [COMUE] (UBFC), Chaim Sheba Medical Center, IRCCS Istituto delle Scienze Neurologiche di Bologna [Bologna, Italy], Ospedale Bellaria [Bologna, Italy], University of Manitoba [Winnipeg], University of California, Ohio State University [Columbus] (OSU), Ghent University Hospital, GeneDx [Gaithersburg, MD, USA], Starship Children's Hospital, University of Auckland [Auckland], Marseille medical genetics - Centre de génétique médicale de Marseille (MMG), Aix Marseille Université (AMU)-Institut National de la Santé et de la Recherche Médicale (INSERM), NHMRC grants APP1155224 and APP1091593 and Channel 7 Children’s Research Foundation, National Human Genome Research Institute of the National Institutes of Health under Award Number U01HG009599, Gall, Valérie, University of California (UC), ANS - Cellular & Molecular Mechanisms, AGEM - Amsterdam Gastroenterology Endocrinology Metabolism, and Institut National de la Santé et de la Recherche Médicale (INSERM)-Aix Marseille Université (AMU)
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Male ,Care4Rare Canada Consortium ,[SDV]Life Sciences [q-bio] ,[SDV.GEN] Life Sciences [q-bio]/Genetics ,Deafness ,Loss of Function Mutation ,Intellectual disability ,Genetics research ,2.1 Biological and endogenous factors ,Medicine ,Missense mutation ,Aetiology ,Child ,Genetics (clinical) ,Genetics & Heredity ,Dystonia ,Genetics ,0303 health sciences ,[SDV.MHEP] Life Sciences [q-bio]/Human health and pathology ,Liver Disease ,030305 genetics & heredity ,Neurodevelopmental disorders ,Syndrome ,Phenotype ,Pedigree ,3. Good health ,[SDV] Life Sciences [q-bio] ,Child, Preschool ,Medical genetics ,Female ,medicine.symptom ,Adult ,medicine.medical_specialty ,Adolescent ,Clinical Sciences ,Mutation, Missense ,Asymptomatic ,Article ,03 medical and health sciences ,Rare Diseases ,Clinical Research ,Intellectual Disability ,Humans ,Preschool ,Loss function ,[SDV.GEN]Life Sciences [q-bio]/Genetics ,business.industry ,Neurosciences ,Membrane Proteins ,medicine.disease ,Brain Disorders ,Xq28 ,Hereditary Central Nervous System Demyelinating Diseases ,Mutation ,Missense ,Digestive Diseases ,business ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology - Abstract
International audience; The BCAP31 gene, located at Xq28, encodes BAP31, which plays a role in ER-to-Golgi anterograde transport. To date, BCAP31 pathogenic variants have been reported in 12 male cases from seven families (six loss of function (LoF) and one missense). Patients had severe intellectual disability (ID), dystonia, deafness, and central hypomyelination, delineating a so-called deafness, dystonia and cerebral hypomyelination syndrome (DDCH). Female carriers are mostly asymptomatic but may present with deafness. BCAP31 is flanked by the SLC6A8 and ABCD1 genes. Contiguous deletions of BCAP31 and ABCD1 and/or SLC6A8 have been described in 12 patients. Patients with deletions including BCAP31 and SLC6A8 have the same phenotype as BCAP31 patients. Patients with deletions of BCAP31 and ABCD1 have contiguous ABCD1 and DXS1375E/BCAP31 deletion syndrome (CADDS), and demonstrate a more severe neurological phenotype with cholestatic liver disease and early death. We report 17 novel families, 14 with intragenic BCAP31 variants (LoF and missense) and three with a deletion of BCAP31 and adjacent genes (comprising two CADDS patients, one male and one symptomatic female). Our study confirms the phenotype reported in males with intragenic LoF variants and shows that males with missense variants exhibit a milder phenotype. Most patients with a LoF pathogenic BCAP31 variant have permanent or transient liver enzyme elevation. We further demonstrate that carrier females (n = 10) may have a phenotype comprising LD, ID, and/or deafness. The male with CADDS had a severe neurological phenotype, but no cholestatic liver disease, and the symptomatic female had moderate ID and cholestatic liver disease.
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- 2021
15. Distinct cord blood C-peptide, adipokine, and lipidomic signatures by in utero HIV exposure
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Lauren C. Balmert, Mitchell E. Geffner, Jennifer Jao, Irwin J. Kurland, Shan Sun, Rhoda S. Sperling, Brian Kirmse, Yunping Qiu, Elaine J. Abrams, Stephen Arpadi, Derek LeRoith, Thomas Kraus, and Landon Myer
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education.field_of_study ,Fetus ,Cord ,business.industry ,C-peptide ,Insulin ,medicine.medical_treatment ,Population ,Adipokine ,Physiology ,chemistry.chemical_compound ,chemistry ,In utero ,Cord blood ,Pediatrics, Perinatology and Child Health ,medicine ,education ,business - Abstract
BACKGROUND Early-life metabolic derangements in HIV-exposed uninfected (HEU) infants have been reported. METHODS Pregnant women with HIV and HIV-uninfected pregnant women were enrolled with their newborns in a US cohort from 2011 to 2015. We measured cord insulin, C-peptide, and metabolic cytokines of HEU and HIV-unexposed uninfected (HUU) newborns using ELISA and metabolites, lipid subspecies, and eicosanoids via liquid chromatography/mass spectrometry. Linear regression was employed to assess the association of intrauterine HIV/ART with insulin and C-peptide. Graphical lasso regression was used to identify differences between metabolite/lipid subspecies networks associated with C-peptide. RESULTS Of 118 infants, 56 were HEU, ART exposed. In adjusted analyses, mean cord insulin (β = 0.295, p = 0.03) and C-peptide (β = 0.522, p
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- 2021
16. Asynchronous telemedicine for clinical genetics consultations in the NICU: a single center’s solution
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Julie D. Kaplan, Emily Boothe, Brian Kirmse, Brayden West, and Laura G. Hendon
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medicine.medical_specialty ,Telemedicine ,Neonatal intensive care unit ,Genetic counseling ,education ,Pilot Projects ,Telehealth ,Intensive Care Units, Neonatal ,medicine ,Humans ,Referral and Consultation ,Genetic testing ,medicine.diagnostic_test ,business.industry ,Infant, Newborn ,Infant ,Obstetrics and Gynecology ,Geneticist ,medicine.disease ,Patient Discharge ,Pediatrics, Perinatology and Child Health ,Workforce ,Medical genetics ,Medical emergency ,business - Abstract
Many infants in the neonatal intensive care unit (NICU) have genetic disorders or birth defects. The demand for genetic services is often complicated by a shortage of genetic providers. Our hospital experienced a significant reduction in genetic workforce, leading to insufficient genetic services to meet demand. The Plan-Do-Study-Act method of quality improvement was used to assess available resources, select an intervention plan, and collect patient outcome and provider satisfaction data. An asynchronous telehealth model was deployed for clinical genetics consultations in our NICU utilizing a remote clinical geneticist. The pilot study included 111 asynchronous telehealth consultations; 21% received a genetic diagnosis before discharge. Diagnoses were primarily chromosomal and single gene disorders. Referring NICU providers reported high satisfaction. Asynchronous telehealth for clinical genetics is a feasible and successful alternative to an on-site clinical geneticist and should be considered in areas with a genetic workforce shortage.
- Published
- 2021
17. Factors Associated with Positive SARS-CoV-2 Test Results in Outpatient Health Facilities and Emergency Departments Among Children and Adolescents Aged <18 Years — Mississippi, September–November 2020
- Author
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Manish M. Patel, Brian Kirmse, Sara S Kim, Lora M Martin, Brendan Flannery, Lisa Haynie, Kathryn Taylor, Sarah McGraw, Charlotte V. Hobbs, Cdc Covid Response Team, and Paul Byers
- Subjects
Male ,medicine.medical_specialty ,Health (social science) ,Adolescent ,Isolation (health care) ,Epidemiology ,Health, Toxicology and Mutagenesis ,Ambulatory Care Facilities ,03 medical and health sciences ,COVID-19 Testing ,Mississippi ,0302 clinical medicine ,Health Information Management ,Risk Factors ,030225 pediatrics ,Pandemic ,Humans ,Medicine ,Full Report ,030212 general & internal medicine ,Child ,business.industry ,Incidence (epidemiology) ,Public health ,Attendance ,COVID-19 ,General Medicine ,Odds ratio ,Confidence interval ,Test (assessment) ,Child, Preschool ,Female ,Emergency Service, Hospital ,business ,Demography - Abstract
As of December 14, 2020, children and adolescents aged
- Published
- 2020
18. Expanding clinical genetics services in a rural state in the post-genomic, technology-connected age: A dispatch from Mississippi
- Author
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Brian Kirmse
- Subjects
medicine.medical_specialty ,Economic growth ,business.industry ,Genomic technology ,Medicine ,Medical genetics ,General Medicine ,State (computer science) ,business - Published
- 2020
19. Practical recommendations for the transition to adulthood for the adolescent with a genetic diagnosis. Special emphasis on inborn errors of metabolism
- Author
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Mauricio De Castro, Clesson Turner, and Brian Kirmse
- Subjects
business.industry ,Transition (fiction) ,Medicine ,General Medicine ,Genetic diagnosis ,business ,Developmental psychology - Published
- 2020
20. Autosomal Recessive Cerebellar Atrophy and Spastic Ataxia in Patients With Pathogenic Biallelic Variants in
- Author
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Deepa S, Rajan, Sukhleen, Kour, Tyler R, Fortuna, Margot A, Cousin, Sarah S, Barnett, Zhiyv, Niu, Dusica, Babovic-Vuksanovic, Eric W, Klee, Brian, Kirmse, Micheil, Innes, Siri Lynne, Rydning, Kaja K, Selmer, Magnus Dehli, Vigeland, Anne Kjersti, Erichsen, Andrea H, Nemeth, Francisca, Millan, Catherine, DeVile, Katherine, Fawcett, Adrien, Legendre, David, Sims, Ricardo Parolin, Schnekenberg, Lydie, Burglen, Sandra, Mercier, Somayeh, Bakhtiari, Rosario, Francisco-Velilla, Azman, Embarc-Buh, Encarnacion, Martinez-Salas, Kristen, Wigby, Jerica, Lenberg, Jennifer R, Friedman, Michael C, Kruer, and Udai Bhan, Pandey
- Abstract
The hereditary ataxias are a heterogenous group of disorders with an increasing number of causative genes being described. Due to the clinical and genetic heterogeneity seen in these conditions, the majority of such individuals endure a diagnostic odyssey or remain undiagnosed. Defining the molecular etiology can bring insights into the responsible molecular pathways and eventually the identification of therapeutic targets. Here, we describe the identification of biallelic variants in the
- Published
- 2021
21. eP370: SouthSeq: Genome sequencing for a diverse population of hospitalized infants
- Author
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Donald Latner, Kevin Bowling, Michelle Thompson, Candice Finnila, Susan Hiatt, Michelle Amaral, James Lawlor, Kelly East, Meagan Cochran, Veronica Greve, Whitley V. Kelley, David Gray, Stephanie Felker, Hannah Meddaugh, Ashley Cannon, Amanda Luedecke, Kelly Jackson, Laura Hendon, Hillary Janani, Marla Johnston, Lee Ann Merin, Sarah Deans, Carly Tuura, Heather Williams, Kelly Laborde, Matthew Neu, Jessica Patrick-Esteve, Anna Hurst, Jegen Kandasamy, Waldemar Carlo, Kyle Brothers, Brian Kirmse, Renate Savich, Duane Superneau, Steven Spedale, Sara Knight, Gregory Barsh, Bruce Korf, and Gregory Cooper
- Subjects
Genetics (clinical) - Published
- 2022
22. Parasitic Disease Surveillance, Mississippi, USA
- Author
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Samuel Jameson, Richard S. Bradbury, Paul Byers, Steven A. Williams, Gretchen Cooley, Sukwan Handali, Regina Galloway, Lisa Haynie, Meredith Lane, Lisa Stempak, Irene Arguello, John V. Williams, Nils Pilotte, Kathryn Hellmann, Bruce Brackin, Charlotte V. Hobbs, Michelle Tharp, Brian Kirmse, Fazlay Faruque, and Susan P. Montgomery
- Subjects
Microbiology (medical) ,Giardiasis ,Epidemiology ,Cryptosporidium ,Infectious and parasitic diseases ,RC109-216 ,parasites ,Necator americanus ,toxocariasis ,Strongyloides stercoralis ,Microbiology ,Feces ,fluids and secretions ,Mississippi ,parasitic diseases ,Strongyloides ,medicine ,Parasitic Diseases ,Helminths ,Humans ,strongyloidiasis ,Toxocara ,biology ,cryptosporidiosis ,Dispatch ,Soil-transmitted helminths ,Giardia ,medicine.disease ,biology.organism_classification ,United States ,zoonoses ,Infectious Diseases ,Strongyloidiasis ,pediatric ,Toxocariasis ,Medicine ,Parasitic Disease Surveillance, Mississippi, USA - Abstract
Surveillance for soil-transmitted helminths, strongyloidiasis, cryptosporidiosis, and giardiasis was conducted in Mississippi, USA. PCR performed on 224 fecal samples for all soil-transmitted helminths and on 370 samples for only Necator americanus and Strongyloides stercoralis identified 1 S. stercoralis infection. Seroprevalences were 8.8% for Toxocara, 27.4% for Cryptosporidium, 5.7% for Giardia, and 0.2% for Strongyloides parasites.
- Published
- 2021
23. Case Report: Ocular Toxocariasis: A Report of Three Cases from the Mississippi Delta
- Author
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Charles D. McGuffey, Ramana S. Moorthy, Charlotte V. Hobbs, Brian Tieu, Kengo Inagaki, Brian Kirmse, Richard S. Bradbury, and Irene Arguello
- Subjects
Adult ,Male ,Rural Population ,Ocular toxocariasis ,Visual acuity ,genetic structures ,030231 tropical medicine ,Visual Acuity ,Enzyme-Linked Immunosorbent Assay ,Mississippi delta ,Eye ,Young Adult ,03 medical and health sciences ,Mississippi ,0302 clinical medicine ,Virology ,Environmental health ,Animals ,Humans ,Medicine ,Eye Infections, Parasitic ,Young adult ,Anthelmintics ,Toxocariasis ,biology ,Rural community ,Poverty ,business.industry ,Toxocara canis ,Articles ,Eye infection ,biology.organism_classification ,eye diseases ,Infectious Diseases ,Child, Preschool ,Larva Migrans ,Female ,Parasitology ,medicine.symptom ,business - Abstract
Ocular toxocariasis can be vision threatening, and is commonly reported from tropical or subtropical regions. Knowledge of clinical manifestations from the United States, particularly in underserved areas such as the American South, is lacking. We report three cases of ocular toxocariasis in individuals from the Mississippi Delta, a rural community with prevalent poverty. Visual acuity was severely affected in two of the three cases. Increased awareness of ocular toxocariasis, which may have under-recognized frequency, will contribute to prompt diagnosis and treatment, which will ultimately improve patient health in the region.
- Published
- 2019
24. Loss of function mutations in GEMIN5 cause a neurodevelopmental disorder
- Author
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Danielle C. Lynch, Jia Wang, Aurora Pujol, Henry Houlden, Diana Castro, Xiaodong Wang, Jan Senderek, Shade B. Moody, Melissa Gibbons, Tim M. Strom, Abigail Collins, Jong Hee Chae, John Landers, Udai Bhan Pandey, Tyler R. Fortuna, Reza Maroofian, Hannah R. McCurry, Andrea H. Németh, Yuehua Zhang, Nathalie Boddaert, Carsten G. Bönnemann, Sabine Rudnik-Schöneborn, Vincent Cantagrel, Kali Juliette, Jeanne Amiel, Amber Begtrup, Sangmoon Lee, David Schorling, Chanika Phornphutkul, Konrad Platzer, E. Corina Andriescu, Roser Urreizti, Eric N. Anderson, Cyril Gitiaux, Randal Richardson, Maha S. Zaki, Matias Wagner, Hasnaa M. Elbendary, Dhivyaa Rajasundaram, Brian Kirmse, Murim Choi, Sandra Donkervoort, Joseph G. Gleeson, Steffen Leiz, Mahmoud Y. Issa, Valentina Stanley, Patrick Frosk, Siri Lynne Rydning, Karine Siquier, Janbernd Kirschner, Sameer Agnihotri, Sarah S. Barnett, Isabelle Desguerre, Michele Yang, Yong Beom Shin, Deepa S. Rajan, Margot A. Cousin, Andrés Nascimento Osorio, A. Micheil Innes, Ying Yang, Elliot S. Stolerman, Youngha Lee, Kimberly McDonald, Alberto Garcia-Oguiza, Edgard Verdura, Caroline Ward, Maria J. Guillen Sacoto, Minghui Wang, Sukhleen Kour, and Kaja Kristine Selmer
- Subjects
Male ,0301 basic medicine ,Developmental Disabilities ,General Physics and Astronomy ,0302 clinical medicine ,Neurodevelopmental disorder ,Loss of Function Mutation ,RNA-Seq ,Neurons ,Regulation of gene expression ,Myoclonic Cerebellar Dyssynergia ,Multidisciplinary ,Neurodevelopmental disorders ,Developmental disorders ,Rigor Mortis ,Gene Expression Regulation, Developmental ,SMN Complex Proteins ,Ribonucleoproteins, Small Nuclear ,Hypotonia ,Pedigree ,Cell biology ,medicine.anatomical_structure ,Child, Preschool ,Gene Knockdown Techniques ,Muscle Hypotonia ,Drosophila ,Female ,medicine.symptom ,Ataxia ,Science ,Induced Pluripotent Stem Cells ,Biology ,Polymorphism, Single Nucleotide ,Article ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,medicine ,Animals ,Humans ,snRNP ,Amino Acid Sequence ,Alleles ,Loss function ,Cerebellar ataxia ,General Chemistry ,Motor neuron ,medicine.disease ,Gene Ontology ,HEK293 Cells ,030104 developmental biology ,030217 neurology & neurosurgery - Abstract
GEMIN5, an RNA-binding protein is essential for assembly of the survival motor neuron (SMN) protein complex and facilitates the formation of small nuclear ribonucleoproteins (snRNPs), the building blocks of spliceosomes. Here, we have identified 30 affected individuals from 22 unrelated families presenting with developmental delay, hypotonia, and cerebellar ataxia harboring biallelic variants in the GEMIN5 gene. Mutations in GEMIN5 perturb the subcellular distribution, stability, and expression of GEMIN5 protein and its interacting partners in patient iPSC-derived neurons, suggesting a potential loss-of-function mechanism. GEMIN5 mutations result in disruption of snRNP complex assembly formation in patient iPSC neurons. Furthermore, knock down of rigor mortis, the fly homolog of human GEMIN5, leads to developmental defects, motor dysfunction, and a reduced lifespan. Interestingly, we observed that GEMIN5 variants disrupt a distinct set of transcripts and pathways as compared to SMA patient neurons, suggesting different molecular pathomechanisms. These findings collectively provide evidence that pathogenic variants in GEMIN5 perturb physiological functions and result in a neurodevelopmental delay and ataxia syndrome., GEMIN5, an RNA-binding protein, is required for formation of small nuclear ribonucleoproteins. Here, the authors identify loss of function mutations in GEMIN5 that are associated with a human neurodevelopmental disorder.
- Published
- 2021
25. Distinct cord blood C-peptide, adipokine, and lipidomic signatures by in utero HIV exposure
- Author
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Jennifer, Jao, Lauren C, Balmert, Shan, Sun, Yunping, Qiu, Thomas A, Kraus, Brian, Kirmse, Rhoda S, Sperling, Elaine J, Abrams, Landon, Myer, Stephen, Arpadi, Mitchell E, Geffner, Derek, LeRoith, and Irwin J, Kurland
- Subjects
Adult ,C-Peptide ,Infant, Newborn ,Infant ,HIV Infections ,Fetal Blood ,Lipids ,Adipokines ,Anti-Retroviral Agents ,Pregnancy ,Lipidomics ,Cytokines ,Humans ,Female ,Pregnancy Complications, Infectious - Abstract
Early-life metabolic derangements in HIV-exposed uninfected (HEU) infants have been reported.Pregnant women with HIV and HIV-uninfected pregnant women were enrolled with their newborns in a US cohort from 2011 to 2015. We measured cord insulin, C-peptide, and metabolic cytokines of HEU and HIV-unexposed uninfected (HUU) newborns using ELISA and metabolites, lipid subspecies, and eicosanoids via liquid chromatography/mass spectrometry. Linear regression was employed to assess the association of intrauterine HIV/ART with insulin and C-peptide. Graphical lasso regression was used to identify differences between metabolite/lipid subspecies networks associated with C-peptide.Of 118 infants, 56 were HEU, ART exposed. In adjusted analyses, mean cord insulin (β = 0.295, p = 0.03) and C-peptide (β = 0.522, p 0.01) were significantly higher in HEU vs. HUU newborns. HEU neonates exhibited primarily positive associations between complex lipids and C-peptide, indicative of fuel storage, and augmented associations between cord eicosanoids and cytokines. HUU neonates exhibited negative associations with lipids and C-peptide indicative of increased fuel utilization.Higher cord insulin and C-peptide in HEU vs. HUU newborns as well as differences in cord metabolites, metabolic-related cytokines, and eicosanoids may reflect a propensity for fuel storage and an inflammatory milieu suggestive of fetal metabolic changes associated with in utero HIV/ART exposure.There is a paucity of studies assessing cord blood and neonatal metabolic health in HIV-exposed uninfected (HEU) newborns, an increasing population worldwide. Compared to HIV-unexposed uninfected (HUU) newborns, HEU newborns exhibit alterations in fuel homeostasis and an inflammatory milieu associated with in utero HIV/antiretroviral therapy (ART) exposure. The long-term implications of these neonatal findings are as yet unknown, but merit continued evaluation as this important and growing population ages into adulthood.
- Published
- 2021
26. eP445: Fatty acid oxidation disorders and acute fatty liver of pregnancy- is it always the LCHAD deficiency 1528G>C variant?
- Author
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Sarah Araji, Dante Varotsis, Brian Kirmse, and Huda Al-Kouatly
- Subjects
Genetics (clinical) - Published
- 2022
27. eP425: Parental impact of genome sequencing during the neonatal period
- Author
-
Kyle Brothers, Carla Rich, Emily Gimpel, Kelly East, Meagan Cochran, Veronica Greve, Whitley V. Kelley, Kelly Jackson, Laura Hendon, Amanda Luedecke, Hillary Janani, Hannah Meddaugh, Donald Latner, Kevin Bowling, Michelle Thompson, Candice Finnila, Susan Hiatt, Michelle Amaral, James Lawlor, David Gray, Stephanie Felker, Ashley Cannon, Marla Johnston, Lee Ann Merin, Sarah Deans, Carly Tuura, Heather Williams, Kelly Laborde, Matthew Neu, Jessica Patrick-Esteve, Anna Hurst, Jegen Kandasamy, Waldemar Carlo, Brian Kirmse, Renate Savich, Duane Superneau, Steven Spedale, Sara Knight, Gregory Barsh, Bruce Korf, and Gregory Cooper
- Subjects
Genetics (clinical) - Published
- 2022
28. eP480: Project ECHO for pediatric genetics in Mississippi: Expanding access to the clinical genetics workup for autism and intellectual disability
- Author
-
Emily Boothe, John Michael Waldrop, and Brian Kirmse
- Subjects
Genetics (clinical) - Published
- 2022
29. Lower mitochondrial DNA and altered mitochondrial fuel metabolism in HIV-exposed uninfected infants in Cameroon
- Author
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Hélène C. F. Côté, Kathleen M. Powis, Elaine J. Abrams, Mitchell E. Geffner, Chunli Yu, Derek LeRoith, Rhoda S. Sperling, Jennifer Jao, Fanny Epie, Emmanuel Nshom, Brian Kirmse, and Irwin J. Kurland
- Subjects
0301 basic medicine ,Mitochondrial DNA ,Nevirapine ,Immunology ,Physiology ,HIV Infections ,Biology ,Mitochondrion ,Real-Time Polymerase Chain Reaction ,DNA, Mitochondrial ,Article ,03 medical and health sciences ,Zidovudine ,Tandem Mass Spectrometry ,Carnitine ,medicine ,Humans ,Immunology and Allergy ,Cameroon ,Prospective cohort study ,Confounding ,Infant ,030112 virology ,Mitochondria ,Dried blood spot ,030104 developmental biology ,Infectious Diseases ,Real-time polymerase chain reaction ,Anti-Retroviral Agents ,Biochemistry ,Energy Metabolism ,Amino Acids, Branched-Chain ,medicine.drug - Abstract
Objective Evaluate blood mitochondrial DNA (mtDNA) content in HIV/antiretroviral-exposed uninfected (HEU) vs. HIV-unexposed uninfected (HUU) infants and investigate differences in mitochondrial-related metabolites by exposure group. Design We enrolled a prospective cohort of HIV-infected and HIV-uninfected pregnant woman/infant pairs in Cameroon. Methods Dried blood spot mtDNA : nuclear DNA ratio was measured by monochrome multiplex quantitative polymerase chain reaction in HEU infants exposed to in-utero antiretrovirals and postnatal zidovudine (HEU-Z) or nevirapine (HEU-N), and in HUU infants at 6 weeks of life. Acylcarnitines and branch-chain amino acids (BCAAs) were measured via tandem mass spectrometry and consolidated into seven uncorrelated components using principal component analysis. Linear regression models were fit to assess the association between in-utero/postnatal HIV/antiretroviral exposure and infant mtDNA, adjusting for confounders and principal component analysis-derived acylcarnitine/BCAA component scores. Results Of 364 singleton infants, 38 were HEU-Z, 117 HEU-N, and 209 HUU. Mean mtDNA content was lowest in HEU-Z infants (140 vs. 160 in HEU-N vs. 174 in HUU, P = 0.004). After adjusting for confounders, HEU-Z infants remained at increased risk for lower mtDNA content compared with HUU infants (β: -4.46, P = 0.045), whereas HEU-N infants did not, compared with HUU infants (β: -1.68, P = 0.269. Furthermore, long-chain acylcarnitines were associated with lower (β: -2.35, P = 0.002) and short-chain and BCAA-related acylcarnitines were associated with higher (β: 2.96, P = 0.001) mtDNA content. Conclusion Compared with HUU infants, HEU infants receiving postnatal zidovudine appear to be at increased risk for decreased blood mtDNA content which may be associated with altered mitochondrial fuel utilization in HEU-Z infants.
- Published
- 2017
30. Prevalence of Asymptomatic Parasitemia and Gametocytemia in HIV-Infected Children on Differing Antiretroviral Therapy
- Author
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William Borkowsky, Jean Tauzie, Portia Kamthunzi, Brian Kirmse, Erin E. Gabriel, Jillian Neal, William R. Prescott, Ted Hall, Gerald Tegha, Jingyang Chen, Charlotte V. Hobbs, Paul Palumbo, Tiina Ilmet, Sunil Parikh, Elena Artimovich, Patrick E. Duffy, Yonghua Li, and Patrick Jean-Philippe
- Subjects
0301 basic medicine ,Male ,medicine.medical_specialty ,Nevirapine ,Anti-HIV Agents ,030106 microbiology ,Plasmodium falciparum ,HIV Infections ,Parasitemia ,Asymptomatic ,03 medical and health sciences ,0302 clinical medicine ,immune system diseases ,Virology ,Internal medicine ,parasitic diseases ,medicine ,Gametocyte ,Prevalence ,Humans ,030212 general & internal medicine ,Malaria, Falciparum ,Asymptomatic Infections ,Africa South of the Sahara ,Reverse-transcriptase inhibitor ,business.industry ,Coinfection ,virus diseases ,Infant ,Articles ,medicine.disease ,3. Good health ,Regimen ,Infectious Diseases ,Child, Preschool ,Parasitology ,Female ,medicine.symptom ,business ,Malaria ,medicine.drug ,Microsatellite Repeats - Abstract
Laboratory data and prior pediatric reports indicate that HIV protease inhibitor (PI)–based antiretroviral therapy (ARV) kills gametocytes and reduces rates of gametocytemia, but not asymptomatic parasitemia, in a high malaria-transmission area. To determine whether ARV regimen impacts these rates in areas with less-intense malaria transmission, we compared asymptomatic parasitemia and gametocytemia rates in HIV-infected children by ARV regimen in Lilongwe, Malawi, an area of low-to-moderate transmission intensity. HIV PI lopinavir–ritonavir (LPV–rtv) ARV– or non-nucleoside reverse transcriptase inhibitor nevirapine ARV–treated children did not differ in the rates of polymerase chain reaction-detected asymptomatic parasitemia (relative risk [RR] 0.43 95% confidence interval [CI] [0.16, 1.18], P value 0.10) or microscopically detected gametocytemia with LPV–rtv ARV during symptomatic malaria (RR 0.48 95% CI [0.22,1.04] P value 0.06). LPV–rtv ARV was not associated with reduced rates of asymptomatic parasitemia, or gametocytemia on days of symptomatic malaria episodes, in HIV-infected children. Larger studies should evaluate whether ARV impacts transmission.
- Published
- 2017
31. A recurrent missense variant in SLC9A7 causes nonsyndromic X-linked intellectual disability with alteration of Golgi acidification and aberrant glycosylation
- Author
-
Anna Hackett, Jozef Gecz, Alina Ilie, Marie Shaw, Wujood Khayat, Tracy Dudding-Byth, Michael Field, Louise Christie, Brian Kirmse, John Orlowski, Mark A. Corbett, Jane Juusola, Vera M. Kalscheuer, and Kathryn Friend
- Subjects
Glycosylation ,Sodium-Hydrogen Exchangers ,X-linked intellectual disability ,Mutation, Missense ,Golgi Apparatus ,CHO Cells ,medicine.disease_cause ,Transfection ,03 medical and health sciences ,chemistry.chemical_compound ,symbols.namesake ,Cricetulus ,Viral Envelope Proteins ,Cricetinae ,Intellectual Disability ,Genetics ,medicine ,Animals ,Humans ,Molecular Biology ,Genetics (clinical) ,chemistry.chemical_classification ,0303 health sciences ,Mutation ,Membrane Glycoproteins ,biology ,Chinese hamster ovary cell ,030305 genetics & heredity ,Cell Membrane ,Genetic Diseases, X-Linked ,General Medicine ,Golgi apparatus ,medicine.disease ,biology.organism_classification ,Cell biology ,Transport protein ,Protein Transport ,chemistry ,Gene Expression Regulation ,Vesicular stomatitis virus ,symbols ,General Article ,Glycoprotein ,Acids ,trans-Golgi Network - Abstract
We report two unrelated families with multigenerational nonsyndromic intellectual disability segregating with a recurrent de novo missense variant (c.1543C>T:p.Leu515Phe) in the alkali cation/proton exchanger gene SLC9A7 (also commonly referred to as NHE7). SLC9A7 is located on human X chromosome at Xp11.3 and has not yet been associated with a human phenotype. The gene is widely transcribed, but especially abundant in brain, skeletal muscle and various secretory tissues. Within cells, SLC9A7 resides in the Golgi apparatus, with prominent enrichment in the trans-Golgi network (TGN) and post-Golgi vesicles. In transfected Chinese hamster ovary AP-1 cells, the Leu515Phe mutant protein was correctly targeted to the TGN/post-Golgi vesicles, but its N-linked oligosaccharide maturation as well as that of a co-transfected secretory membrane glycoprotein, vesicular stomatitis virus G (VSVG) glycoprotein, was reduced compared to cells co-expressing SLC9A7 wild-type and VSVG. This correlated with alkalinization of the TGN/post-Golgi compartments, suggestive of a gain-of-function. Membrane trafficking of glycosylation-deficient Leu515Phe and co-transfected VSVG to the cell surface, however, was relatively unaffected. Mass spectrometry analysis of patient sera also revealed an abnormal N-glycosylation profile for transferrin, a clinical diagnostic marker for congenital disorders of glycosylation. These data implicate a crucial role for SLC9A7 in the regulation of TGN/post-Golgi pH homeostasis and glycosylation of exported cargo which may underlie the cellular pathophysiology and neurodevelopmental deficits associated with this particular nonsyndromic form of X-linked intellectual
- Published
- 2019
32. Plasma fibroblast growth factor-21 levels in patients with inborn errors of metabolism
- Author
-
Kristina Cusmano, Brian Kirmse, Juan Cabrerra-Luque, Marshall L. Summar, Omar B. Ayyub, and Kimberly A. Chapman
- Subjects
0301 basic medicine ,medicine.medical_specialty ,FGF21 ,Short Communication ,Mitochondrial disease ,030105 genetics & heredity ,03 medical and health sciences ,0302 clinical medicine ,Endocrinology ,Internal medicine ,Genetics ,medicine ,In patient ,Fibroblast ,lcsh:QH301-705.5 ,Molecular Biology ,lcsh:R5-920 ,business.industry ,Metabolism ,medicine.disease ,medicine.anatomical_structure ,lcsh:Biology (General) ,Biomarker (medicine) ,lcsh:Medicine (General) ,business ,030217 neurology & neurosurgery - Abstract
Fibroblast growth factor-21 (FGF21) levels are elevated in patients with primary mitochondrial disorders but have not been studied in patients with inborn errors of metabolism (IEM) known to have secondary mitochondrial dysfunction. We measured plasma FGF21 by ELISA in patients with and without IEM. FGF21 levels were higher in patients with IEM compared to without IEM (370 pg/dL vs. 0–65 pg/dL). Further study of FGF21 as a biomarker in IEM is warranted.
- Published
- 2017
33. Complex care of individuals with multiple sulfatase deficiency: Clinical cases and consensus statement
- Author
-
Adeline Vanderver, Florian Eichler, Nicola Brunetti-Pierri, Mauricio De Castro, Giancarlo Parenti, Joerg Klepper, Andrea Ballabio, Alan Finglas, Marcus Lee, Thomas Dierks, Brian Kirmse, Jutta Gaertner, Lars Schlotawa, Laura Adang, Amber Olsen, Rebecca C. Ahrens-Nicklas, Arastoo Vossough, Can Ficicioglu, Ahrens-Nicklas, Rebecca, Schlotawa, Lar, Ballabio, Andrea, Brunetti-Pierri, Nicola, De Castro, Mauricio, Dierks, Thoma, Eichler, Florian, Ficicioglu, Can, Finglas, Alan, Gaertner, Jutta, Kirmse, Brian, Klepper, Joerg, Lee, Marcu, Olsen, Amber, Parenti, Giancarlo, Vossough, Arastoo, Vanderver, Adeline, and Adang, Laura A.
- Subjects
0301 basic medicine ,Male ,Consensus ,Multiple Sulfatase Deficiency Disease ,Endocrinology, Diabetes and Metabolism ,Consensu ,Outcomes ,030105 genetics & heredity ,Diagnostic evaluation ,Care ,Bioinformatics ,Biochemistry ,Article ,03 medical and health sciences ,0302 clinical medicine ,Endocrinology ,Rare Diseases ,Genetic ,Multiple sulfatase deficiency ,Genetics ,Medicine ,Humans ,Chondrodysplasia punctata ,Oxidoreductases Acting on Sulfur Group Donors ,Clinical phenotype ,Molecular Biology ,Outcome ,business.industry ,Ichthyosis ,Sulfatase ,Prevention ,Leukodystrophy ,Brain ,Mucopolysaccharidoses ,medicine.disease ,3. Good health ,Metachromatic leukodystrophy ,Mucopolysaccharidose ,Child, Preschool ,Mutation ,Female ,Therapy ,Sulfatases ,business ,Protein Processing, Post-Translational ,030217 neurology & neurosurgery - Abstract
Multiple sulfatase deficiency (MSD) is an ultra-rare neurodegenerative disorder that results in defective sulfatase post-translational modification. Sulfatases in the body are activated by a unique protein, formylglycine-generating enzyme (FGE) that is encoded by SUMF1. When FGE is absent or insufficient, all 17 known human sulfatases are affected, including the enzymes associated with metachromatic leukodystrophy (MLD), several mucopolysaccharidoses (MPS II, IIIA, IIID, IVA, VI), chondrodysplasia punctata, and X-linked ichthyosis. As such, individuals demonstrate a complex and severe clinical phenotype that has not been fully characterized to date. In this report, we describe two individuals with distinct clinical presentations of MSD. Also, we detail a comprehensive systems-based approach to the management of individuals with MSD, from the initial diagnostic evaluation to unique multisystem issues and potential management options. As there have been no natural history studies to date, the recommendations within this report are based on published studies and consensus opinion and underscore the need for future research on evidence-based outcomes to improve management of children with MSD.
- Published
- 2017
34. Lower Preprandial Insulin and Altered Fuel Use in HIV/Antiretroviral-Exposed Infants in Cameroon
- Author
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Pius M. Tih, Fanny Epie, Rhoda S. Sperling, Yunping Qiu, Emmanuel Nshom, Jennifer Jao, Brian Kirmse, Derek LeRoith, Mitchell E. Geffner, Chunli Yu, Kathleen M. Powis, Elaine J. Abrams, and Irwin J. Kurland
- Subjects
Male ,medicine.medical_specialty ,Nevirapine ,Endocrinology, Diabetes and Metabolism ,medicine.medical_treatment ,Clinical Biochemistry ,Human immunodeficiency virus (HIV) ,Physiology ,HIV Infections ,Context (language use) ,Biology ,medicine.disease_cause ,Biochemistry ,Zidovudine ,Endocrinology ,Pregnancy ,immune system diseases ,Internal medicine ,medicine ,Humans ,Insulin ,Cameroon ,Prospective Studies ,Prospective cohort study ,health care economics and organizations ,Fetus ,Biochemistry (medical) ,Infant ,virus diseases ,Original Articles ,Anti-Retroviral Agents ,In utero ,Immunology ,behavior and behavior mechanisms ,Female ,Energy Metabolism ,Amino Acids, Branched-Chain ,medicine.drug - Abstract
Intrauterine HIV/antiretroviral (ARV) and postnatal ARVs are known to perturb energy metabolism and could have permanent effects on future metabolic health. Such maladaptive effects could be mediated by changes in mitochondrial function and intermediary metabolism due to fetal and early-life ARV exposure in HIV/ARV-exposed uninfected (HEU) infants.The objective of the study was to understand the relationship(s) between mitochondrial fuel use (assessed via acylcarnitines and branched chain amino acids) and preprandial insulin in infants exposed to in utero HIV/ARV plus postnatal zidovudine or nevirapine compared with HIV/ARV-unexposed uninfected (HUU) infants.This was a prospective cohort study with the following three groups: 1) intrauterine HIV/ARV/postnatal zidovudine-exposed (HEU-A), 2) intrauterine HIV/ARV/postnatal nevirapine-exposed (HEU-N), and 3) HUU infants. Principal component analysis and linear regression modeling were performed to assess the association between in utero HIV/ARV exposure and infant insulin.The study was conducted at Cameroonian urban antenatal centers.HIV-infected and -uninfected pregnant woman/infant dyads participated in the study.Preprandial insulin was the main outcome measured.Of 366 infants, 38 were HEU-A, 118 HEU-N. Forty intermediary metabolites were consolidated into seven principal components. In a multivariate analysis, both HEU-A (β = -.116, P= .012) and HEU-N (β = -.070, P= .022) demonstrated lower insulin compared with HUU infants. However, at high levels of plasma metabolites, HEU-A (β = .027, P= .050) exhibited higher insulin levels than HEU-N or HUU infants. A unique array of short-chain acylcarnitines (β = .044, P= .001) and branched-chain amino acids (β = .033, P= .012) was associated with insulin.HEU-A and HEU-N infants have lower preprandial insulin levels at 6 weeks of age and appear to use metabolic fuel substrates differently than HUU infants. Future studies are warranted to determine whether observed differences have lasting metabolic implications, such as later insulin resistance.
- Published
- 2015
35. Concurrent non-ketotic hyperglycinemia and propionic acidemia in an eight year old boy
- Author
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Brian Kirmse, Dina J. Zand, Paul Kruszka, Kimberly A. Chapman, Elaine B. Spector, Kristina Cusmano-Ozog, and Johan L.K. Van Hove
- Subjects
medicine.medical_specialty ,Hyperglycinemia ,Case Report ,Propionic acidemia ,03 medical and health sciences ,0302 clinical medicine ,Endocrinology ,Internal medicine ,Genetics ,medicine ,Ketotic hyperglycinemia ,Carnitine ,lcsh:QH301-705.5 ,Molecular Biology ,030304 developmental biology ,lcsh:R5-920 ,0303 health sciences ,business.industry ,Metabolic acidosis ,medicine.disease ,3. Good health ,lcsh:Biology (General) ,Ketonuria ,Thiamine ,Non-ketotic hyperglycinemia ,lcsh:Medicine (General) ,business ,030217 neurology & neurosurgery ,medicine.drug ,Urine organic acids - Abstract
This is the first reported case of a patient with both non-ketotic hyperglycinemia and propionic acidemia. At 2 years of age, the patient was diagnosed with non-ketotic hyperglycinemia by elevated glycine levels and mutations in the GLDC gene (paternal allele: c.1576_1577insC delT and c.1580delGinsCAA; p.S527Tfs*13, and maternal allele: c.1819G>A; p.G607S). At 8 years of age after having been placed on ketogenic diet, he became lethargic and had severe metabolic acidosis with ketonuria. Urine organic acid analysis and plasma acylcarnitine profile were consistent with propionic acidemia. He was found to have an apparently homozygous mutation in the PCCB gene: c.49C>A; p.Leu17Met. The patient was also treated with natural protein restriction, carnitine, biotin, and thiamine and had subjective and biochemical improvement.
- Published
- 2014
36. Malaria in HIV-Infected Children Receiving HIV Protease-Inhibitor- Compared with Non-Nucleoside Reverse Transcriptase Inhibitor-Based Antiretroviral Therapy, IMPAACT P1068s, Substudy to P1060
- Author
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Benjamin H. Chi, Philippa Musoke, Nagamah S Deygoo, Linda Barlow-Mosha, Yonghua Li, Jingyang Chen, Sunil Parikh, Jillian Neal, Brian Kirmse, Lynne M. Mofenson, Gerald Tegha, Charlotte V. Hobbs, Tiina Ilmet, William Borkowsky, Patrick Jean Philippe, Patrick E. Duffy, Jean Tauzie, Elizabeth Petzold, Portia Kamthunzi, Erin E. Gabriel, Paul Palumbo, and William R. Prescott
- Subjects
RNA viruses ,Male ,0301 basic medicine ,Malawi ,HIV Infections ,Pathology and Laboratory Medicine ,Biochemistry ,Lopinavir ,Geographical Locations ,0302 clinical medicine ,Immunodeficiency Viruses ,Medicine and Health Sciences ,HIV Protease Inhibitor ,Public and Occupational Health ,Drug Interactions ,Enzyme Inhibitors ,Malaria, Falciparum ,Child ,Protozoans ,Multidisciplinary ,Reverse-transcriptase inhibitor ,Coinfection ,Malarial Parasites ,Drugs ,Lamivudine ,Viral Load ,Vaccination and Immunization ,3. Good health ,Medical Microbiology ,Viral Pathogens ,Child, Preschool ,Viruses ,Reverse Transcriptase Inhibitors ,Medicine ,Drug Therapy, Combination ,Female ,Pathogens ,Zidovudine ,Research Article ,medicine.drug ,medicine.medical_specialty ,Nevirapine ,Science ,Immunology ,Plasmodium falciparum ,030231 tropical medicine ,030106 microbiology ,Antiretroviral Therapy ,Microbiology ,Antimalarials ,03 medical and health sciences ,Antiviral Therapy ,Internal medicine ,Retroviruses ,parasitic diseases ,Parasitic Diseases ,medicine ,Humans ,Protease Inhibitors ,Protease inhibitor (pharmacology) ,Microbial Pathogens ,Pharmacology ,Ritonavir ,business.industry ,Lentivirus ,Organisms ,Biology and Life Sciences ,HIV ,Infant ,HIV Protease Inhibitors ,Tropical Diseases ,medicine.disease ,Virology ,Parasitic Protozoans ,Malaria ,CD4 Lymphocyte Count ,People and Places ,Africa ,Enzymology ,HIV-1 ,Preventive Medicine ,business - Abstract
BackgroundHIV and malaria geographically overlap. HIV protease inhibitors kill malaria parasites in vitro and in vivo, but further evaluation in clinical studies is needed.MethodsThirty-one children from Malawi aged 4-62 months were followed every 3 months and at intercurrent illness visits for ≤47 months (September 2009-December 2011). We compared malaria parasite carriage by blood smear microscopy (BS) and confirmed clinical malaria incidence (CCM, or positive BS with malaria symptoms) in children initiated on HIV antiretroviral therapy (ART) with zidovudine, lamivudine, and either nevirapine (NVP), a non-nucleoside reverse transcriptase inhibitor, or lopinavir-ritonavir (LPV-rtv), a protease inhibitor.ResultsWe found an association between increased time to recurrent positive BS, but not CCM, when anti-malarial treatment and LPV-rtv based ART were used concurrently and when accounting for a LPV-rtv and antimalarial treatment interaction (adjusted HR 0.39; 95% CI (0.17,0.89); p = 0.03).ConclusionsLPV-rtv in combination with malaria treatment was associated with lower risk of recurrent positive BS, but not CCM, in HIV-infected children. Larger, randomized studies are needed to confirm these findings which may permit ART optimization for malaria-endemic settings.Trial registrationClinicalTrials.gov NCT00719602.
- Published
- 2016
37. When Newborn Screens Fail, Maple Syrup Urine Disease in a Toddler
- Author
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Lisa Biswas, Julia Thompson, Beth Brownlee, Marlaina Berch, Kimberly Paduda, Lisa Didion, Tarif Bakdash, Dustin Bratton, and Brian Kirmse
- Subjects
Pediatrics, Perinatology and Child Health - Published
- 2018
38. Complex care of patients with multiple sulfatase deficiency: Clinical cases and guideline consensus statement
- Author
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Mauricio De Castro, Lars Schlotawa, Adeline Vanderver, Alan Finglas, Nicola Brunetti, Marcus Lee, Can Ficicioglu, Brian Kirmse, Andrea Ballabio, Laura Adang, Rebecca C. Ahrens-Nicklas, and Amber Olsen
- Subjects
medicine.medical_specialty ,Statement (logic) ,business.industry ,Endocrinology, Diabetes and Metabolism ,Guideline ,medicine.disease ,Biochemistry ,03 medical and health sciences ,0302 clinical medicine ,Endocrinology ,Multiple sulfatase deficiency ,030225 pediatrics ,Genetics ,medicine ,business ,Intensive care medicine ,Molecular Biology ,030217 neurology & neurosurgery - Published
- 2018
39. High prevalence of structural heart disease in children with cblC-type methylmalonic aciduria and homocystinuria
- Author
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George A. Diaz, Brian Kirmse, Shubhika Srivastava, Laurie E. Profitlich, and Melissa P. Wasserstein
- Subjects
Adult ,Diagnostic Imaging ,Male ,medicine.medical_specialty ,Adolescent ,Heart Diseases ,Heart disease ,Endocrinology, Diabetes and Metabolism ,Methylmalonic acid ,Homocystinuria ,Biochemistry ,Young Adult ,chemistry.chemical_compound ,Folic Acid ,Endocrinology ,Internal medicine ,Prevalence ,Genetics ,Humans ,Medicine ,Mitral valve prolapse ,Child ,Molecular Biology ,Demography ,Ultrasonography ,Mitral regurgitation ,business.industry ,Infant, Newborn ,Infant ,medicine.disease ,United States ,Pulmonary embolism ,chemistry ,Methylmalonic aciduria ,Child, Preschool ,Cardiology ,Female ,CBLC ,business ,Metabolism, Inborn Errors ,Methylmalonic Acid - Abstract
Objective To characterize the frequency and nature of cardiovascular defects in patients with CblC-type methylmalonic aciduria and homocystinuria (cblC), an inborn error of cobalamin (vitamin B12) metabolism resulting in accumulation of methylmalonic acid and homocysteine. Study design A retrospective observational study was conducted investigating 10 patients with cblC ranging in age from 2 weeks to 24 years (mean 4.4 years +/− 7.5 years, median 0.6 years). All patients underwent a complete 2-D echocardiogram including quantitative assessment of left ventricular systolic function. Results Structural heart defects were detected in 50% of patients with cblC. Heart defects included left ventricular (LV) non-compaction (3), secundum atrial septal defect (2), muscular ventricular septal defect (1), dysplastic pulmonary valve without pulmonary stenosis (1) and mitral valve prolapse with mild mitral regurgitation (1). One patient had resolved cor pulmonale and right heart failure secondary to pulmonary embolism. All patients had quantitatively normal LV systolic function. Conclusions Diverse and clinically significant structural heart defects appear to be highly prevalent in cblC, perhaps due to abnormal DNA and histone methylation during embryogenesis. The specific cardiac defects detected in our cohort were variable, and studies with a larger number of patients are needed to establish which forms are most common. Routine and periodic cardiovascular evaluation may be indicated in patients with cblC.
- Published
- 2009
40. Short-term follow-up systems for positive newborn screens in the Washington Metropolitan Area and the United States
- Author
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Sarah Viall, Nicholas Ah Mew, Brian Kirmse, Marshall L. Summar, Sneha Jain, and Kimberly A. Chapman
- Subjects
Male ,Pediatrics ,medicine.medical_specialty ,Endocrinology, Diabetes and Metabolism ,Specialty ,Time to treatment ,Primary care ,Biochemistry ,Physicians, Primary Care ,Time-to-Treatment ,Endocrinology ,Neonatal Screening ,Genetics ,medicine ,Humans ,Medical diagnosis ,Molecular Biology ,Newborn screening ,Maryland ,business.industry ,Infant, Newborn ,Virginia ,food and beverages ,Infant ,Presumed positive ,Infant newborn ,Metropolitan area ,Family medicine ,Health Care Surveys ,embryonic structures ,District of Columbia ,Female ,business ,Metabolism, Inborn Errors - Abstract
For most inherited metabolic disorders on newborn screening (NBS) panels, prompt, expert confirmation and treatment are critical to optimize clinical outcomes for children with inherited metabolic diseases (IMD). In the Washington Metropolitan Area (WMA), 3 different short-term follow-up (STFU) systems exist for linking infants with positive newborn screens for IMD to appropriate specialty care. We diagrammed the STFU systems for the District of Columbia, Maryland and Virginia and calculated clinically relevant intervals of time between NBS collection and diagnosis/treatment initiation. We also surveyed representatives from 48 other state NBS programs to classify the STFU systems in the rest of the country. We found that in the WMA the STFU system that did not include the IMD specialist at the same time as the primary care provider (PCP) was associated with a longer median collection-to-specialist contact interval for true positive NBS for critical diagnoses (p=0.013). Nationally, 25% of state NBS programs report having a STFU system that does not include the IMD specialist at the same time as the PCP. In conclusion, there is variability among the STFU systems employed by NBS programs in the US which may lead to delays in diagnosis confirmation and treatment. National standards for STFU systems that include early involvement of an IMD specialist for all presumed positive NBS results may decrease the collection-to-specialist contact interval which could improve clinical outcomes in children with IMD.
- Published
- 2015
41. Deconstructing Black Swans: An Introductory Approach to Inherited Metabolic Disorders in the Neonate
- Author
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Nicholas Ah Mew, Brian Kirmse, Kimberly A. Chapman, and Sarah Viall
- Subjects
medicine.medical_specialty ,business.industry ,Expert advice ,Infant, Newborn ,General Medicine ,Research management ,Black swan theory ,Infant, Newborn, Diseases ,Neonatal Screening ,Intervention (counseling) ,Pediatrics, Perinatology and Child Health ,medicine ,Intensive Care, Neonatal ,Humans ,Autopsy ,Intensive care medicine ,business ,Metabolism, Inborn Errors - Abstract
BACKGROUND Inherited metabolic disorders (IMDs) are individually rare but collectively common disorders that frequently require rapid or urgent therapy. PURPOSE This article provides a generalized approach to IMDs, as well as some investigations and safe therapies that may be initiated pending the metabolic consult. METHODS/SEARCH STRATEGY An overview of the research supporting management strategies is provided. In addition, the newborn metabolic screen is reviewed. FINDINGS/RESULTS Caring for infants with IMDs can seem difficult because each of the types is rarely seen; however, collectively the management can be seen as similar. IMPLICATIONS FOR PRACTICE When an IMD is suspected, a metabolic specialist should be consulted for expert advice regarding appropriate laboratory investigations and management. Because rapid intervention of IMDs before the onset of symptoms may prevent future irreversible sequelae, each abnormal newborn screen must be addressed promptly. IMPLICATIONS FOR RESEARCH Management can be difficult. Research in this area is limited and can be difficult without multisite coordination since sample sizes of any significance are difficult to achieve.
- Published
- 2015
42. Cerebral Lipid Accumulation Detected by MRS in a Child with Carnitine Palmitoyltransferase 2 Deficiency: A Case Report and Review of the Literature on Genetic Etiologies of Lipid Peaks on MRS
- Author
-
Jonathan Murnick, Molly H. Silber, Carlos Ferreira, Taeun Chang, and Brian Kirmse
- Subjects
chemistry.chemical_classification ,Cholesterol ,Bilayer ,Fatty acid ,Nuclear magnetic resonance spectroscopy ,Biology ,medicine.disease ,Functional magnetic resonance spectroscopy of the brain ,Article ,chemistry.chemical_compound ,Refsum disease ,chemistry ,Biochemistry ,Carnitine palmitoyltransferase 2 ,medicine ,lipids (amino acids, peptides, and proteins) ,Methyl group - Abstract
The majority of lipids in the brain are located in the bilayer membranes. These lipids are not visible by magnetic resonance spectroscopy since they have restricted mobility. Only mobile lipids, such as cholesterol esters or triglycerides in neutral lipid droplets, have enough rotational freedom to generate a signal on spectroscopy. These signals are detected as peaks at 1.3 ppm, originating from the methylene groups in the fatty acid chain, and 0.9 ppm, originating from the distal methyl group. We review the literature on the different genetic conditions that have been found to show lipid peaks on brain spectroscopy and report the first patient with carnitine palmitoyltransferase 2 deficiency shown to have such lipid peaks, thus indicating brain fat accumulation.
- Published
- 2015
43. 408: Placental amino acid profiles in HIV-infected mothers on antiretroviral therapy
- Author
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Huda B. Al-Kouatly, Natella Rakhmanina, Brian Kirmse, Gary Cunningham, and Rachel K. Scott
- Subjects
chemistry.chemical_classification ,chemistry ,business.industry ,Hiv infected ,Obstetrics and Gynecology ,Medicine ,business ,Virology ,Antiretroviral therapy ,Amino acid - Published
- 2017
44. Novel first-dose adverse drug reactions during a phase I trial of olipudase alfa (recombinant human acid sphingomyelinase) in adults with Niemann-Pick disease type B (acid sphingomyelinase deficiency)
- Author
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Brian Kirmse, Gerald F. Cox, Melissa P. Wasserstein, Susan M. Richards, Beth L. Thurberg, Margaret M. McGovern, Thomas D. Schiano, and W. Lane Duvall
- Subjects
0301 basic medicine ,Drug ,Adult ,Male ,medicine.medical_specialty ,Ceramide ,media_common.quotation_subject ,law.invention ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,law ,hemic and lymphatic diseases ,Internal medicine ,medicine ,Humans ,Enzyme Replacement Therapy ,Adverse effect ,Genetics (clinical) ,media_common ,Hyperbilirubinemia ,Dose-Response Relationship, Drug ,business.industry ,Interleukin-8 ,Acute-phase protein ,nutritional and metabolic diseases ,Olipudase alfa ,Niemann-Pick Disease, Type B ,Middle Aged ,Niemann-Pick Disease, Type A ,medicine.disease ,Recombinant Proteins ,030104 developmental biology ,Endocrinology ,C-Reactive Protein ,Sphingomyelin Phosphodiesterase ,chemistry ,Recombinant DNA ,Female ,Acid sphingomyelinase ,Niemann–Pick disease ,business ,030217 neurology & neurosurgery ,medicine.drug - Abstract
Enzyme replacement therapy with olipudase alfa (recombinant human acid sphingomyelinase) is being developed for Niemann-Pick disease type B (NPD B).A single-center, open-label, nonrandomized, single-ascending-dose trial evaluated the safety of intravenous olipudase alfa (0.03-1.0 mg/kg) in 11 adults with NPD B. Patients were monitored in the hospital for 72 h after infusion and had follow-up visits on days 14 and 28.Plasma ceramide, a product of sphingomyelin catabolism by olipudase alfa, showed dose-dependent elevations by 6 h postdose, or postinfusion. No serious adverse drug reactions (ADRs) occurred during the study. Acute phase reaction-type ADRs, as evidenced by elevated inflammatory biomarkers (high-sensitivity C-reactive protein, interleukin-8, and calcitonin) and constitutional symptoms (fever, pain, nausea, and/or vomiting) emerged 12-24 h following doses ≥0.3 mg/kg olipudase alfa. Three patients experienced hyperbilirubinemia. The study was terminated after a patient dosed at 1 mg/kg exhibited severe hyperbilirubinemia; he was subsequently diagnosed with Gilbert syndrome.The maximum tolerated dose of olipudase alfa in adults with NPD B was 0.6 mg/kg. First-dose ADRs were likely induced by elevated concentrations of ceramide (or its downstream derivatives) generated by the catabolism of accumulated sphingomyelin. Within-patient dose escalation to slowly catabolize sphingomyelin stores may be a strategy to mitigate first-dose ADRs in patients with NPD B.Genet Med 18 1, 34-40.
- Published
- 2014
45. Severe Neonatal Holocarboxylase Synthetase Deficiency in West African Siblings
- Author
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Brian Kirmse, Mauricio De Castro, Uta Lichter-Konecki, and Dina J. Zand
- Subjects
medicine.medical_specialty ,Pediatrics ,business.industry ,Biotinidase deficiency ,Metabolic acidosis ,medicine.disease ,Article ,Neonatal Holocarboxylase Synthetase Deficiency ,chemistry.chemical_compound ,Endocrinology ,Biotin ,chemistry ,Internal medicine ,Lactic acidosis ,medicine ,Holocarboxylase synthetase ,business ,Multiple carboxylase deficiency ,Urine organic acids - Abstract
In multiple carboxylase deficiency (MCD), the biotin-dependent carboxylases have decreased activity due to either biotinidase deficiency or holocarboxylase synthetase (HS) deficiency. We report the case of two siblings from Ghana, the first of which presented shortly after birth with profound lactic acidosis and a urine organic acid profile consistent with MCD. In the first sibling, treatment with pulverized biotin tablets (20 mg) was begun immediately, but the patient died at 10 days of age from cardiac arrest secondary to refractory metabolic acidosis. Autopsy revealed a biotin bezoar. Sequencing of HCLS showed homozygosity for a novel missense variant (p.G241W). The second sibling had a similar presentation at birth: severe metabolic acidosis and respiratory distress. A urine organic acid profile was consistent with HS deficiency; he was treated with biotin powder (20 mg), and after 24 h, the lactate decreased significantly; by day 5 of life, the patient was tolerating 40 mg of biotin, feeding by mouth and off all other medications and support. This is the first report of the p.G241W mutation. To our knowledge, this is also the first mutation described in West African patients with HS deficiency and the cases demonstrate that it is biotin responsive. Additionally, our experience suggests that the powdered form of biotin supplementation may be more digestible than tablets for the treatment of severe neonatal HS deficiency.
- Published
- 2014
46. The incidence of urea cycle disorders
- Author
-
Stefan Koelker, Cynthia Le Mons, Marshall L. Summar, Debra Freedenberg, Hye-Seung Lee, Johannes Häberle, Brian Kirmse, University of Zurich, and Summar, Marshall L
- Subjects
Male ,medicine.medical_specialty ,Pediatrics ,1303 Biochemistry ,Urea cycle disorder ,Endocrinology, Diabetes and Metabolism ,Argininosuccinic Aciduria ,610 Medicine & health ,Argininosuccinate Synthase ,Biochemistry ,Article ,03 medical and health sciences ,0302 clinical medicine ,Endocrinology ,Neonatal Screening ,1311 Genetics ,Internal medicine ,Genetics ,medicine ,1312 Molecular Biology ,Humans ,Molecular Biology ,Amino Acid Metabolism, Inborn Errors ,Urea Cycle Disorders, Inborn ,030304 developmental biology ,0303 health sciences ,Newborn screening ,business.industry ,Incidence (epidemiology) ,Infant, Newborn ,Hyperammonemia ,medicine.disease ,Argininosuccinate lyase ,Argininosuccinate Lyase ,United States ,3. Good health ,1310 Endocrinology ,Europe ,2712 Endocrinology, Diabetes and Metabolism ,Argininosuccinic aciduria ,Inborn error of metabolism ,10036 Medical Clinic ,Urea cycle ,Female ,business ,030217 neurology & neurosurgery - Abstract
A key question for urea cycle disorders is their incidence. In the United States two UCDs argininosuccinic synthetase and lyase deficiency are currently detected by newborn screening. We used newborn screening data on over 6. million births and data from the large US and European longitudinal registries to determine how common these conditions are. The incidence for the United States is predicted to be 1 urea cycle disorder patient for every 35000 births presenting about 113 new patients per year across all age groups. © 2013.
- Published
- 2013
47. Metabolic and mitochondrial effects of antiretroviral drug exposure in pregnancy and postpartum: implications for fetal and future health
- Author
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Natella Rakhmanina, Stephen Baumgart, and Brian Kirmse
- Subjects
Human immunodeficiency virus (HIV) ,Energy metabolism ,Physiology ,Antiretroviral drug ,HIV Infections ,Pharmacology ,medicine.disease_cause ,Oxidative Phosphorylation ,Pregnancy ,medicine ,Humans ,Pregnancy Complications, Infectious ,Maternal-Fetal Exchange ,Fetus ,business.industry ,medicine.disease ,Infectious Disease Transmission, Vertical ,Mitochondria ,Mitochondrial toxicity ,Anti-Retroviral Agents ,Pediatrics, Perinatology and Child Health ,Gestation ,Female ,business ,Dyslipidemia - Abstract
Antiretroviral drugs (ARVs) are indispensable in the treatment and prevention of human immunodeficiency virus infection. Although their use before, during and after pregnancy is considered safe for mother and child, there are still lingering concerns about their long-term health consequences and the ramifications of their effects on lipid, glucose, intermediary and mitochondrial metabolism. This article reviews the known effects of ARVs on macromolecular and mitochondrial metabolism as well as the potential maternal, fetal, neonatal and adult health risks associated with abnormal energy metabolism during gestation. Recommendations about enhanced monitoring for these risks in affected populations are being provided.
- Published
- 2012
48. Study of LPIN1, LPIN2 and LPIN3 in rhabdomyolysis and exercise-induced myalgia
- Author
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Pascale de Lonlay, James McGill, Caroline Michot, Shamima Rahman, Orly Elpeleg, Ophry Pines, Soumeya Bekri, Asmaa Mamoune, Louis Viollet, Michelle A. Farrar, Norma B. Romero, Brian Kirmse, Marc Jeanpierre, Suja Mathew, Maya von der Hagen, Agnès Delahodde, Laurence Hubert, Emma Glamuzina, Amr Gouda, Arnold Munnich, Ian E. Alexander, Yves de Keyzer, Pascal Laforêt, Pascale Benlian, Magalie Barth, Edwin P. Kirk, Heidi Peters, Institut de génétique et microbiologie [Orsay] (IGM), and Université Paris-Sud - Paris 11 (UP11)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
myalgia ,Male ,Gastroenterology ,Rhabdomyolysis ,Cohort Studies ,0302 clinical medicine ,Young adult ,Child ,Genetics (clinical) ,0303 health sciences ,biology ,Nuclear Proteins ,Middle Aged ,3. Good health ,[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology ,Child, Preschool ,Female ,Lipodystrophy ,medicine.symptom ,Adult ,medicine.medical_specialty ,DNA, Complementary ,Adolescent ,Phosphatidate Phosphatase ,Genes, Recessive ,Polymorphism, Single Nucleotide ,03 medical and health sciences ,Young Adult ,Muscular Diseases ,Internal medicine ,Genetics ,medicine ,Humans ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Muscle, Skeletal ,Exercise ,030304 developmental biology ,Retrospective Studies ,Chronic recurrent multifocal osteomyelitis ,Myoglobinuria ,Genetic Complementation Test ,Infant ,medicine.disease ,Endocrinology ,Mutation ,biology.protein ,Creatine kinase ,Exercise-induced myalgia ,030217 neurology & neurosurgery - Abstract
International audience; BACKGROUND: Recessive LPIN1 mutations were identified as a cause of severe rhabdomyolysis in pediatric patients. The human lipin family includes two other closely related members, lipin-2 and 3, which share strong homology and similar activity. The study aimed to determine the involvement of the LPIN family genes in a cohort of pediatric and adult patients (n = 171) presenting with muscular symptoms, ranging from severe (CK >10 000 UI/L) or moderate (CK
- Published
- 2012
49. Abnormal newborn screens and acylcarnitines in HIV-exposed and ARV-exposed infants
- Author
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Kimiyo Raymond, Charlotte V. Hobbs, Marshall L. Summar, Brian Kirmse, Karen Kloke, Michele Caggana, Bryan LaPlante, William Borkowsky, and Inga Peter
- Subjects
Microbiology (medical) ,medicine.medical_specialty ,Population ,New York ,HIV Infections ,Infant, Newborn, Diseases ,Article ,Neonatal Screening ,Internal medicine ,Carnitine ,medicine ,Humans ,education ,Beta oxidation ,chemistry.chemical_classification ,education.field_of_study ,Newborn screening ,business.industry ,Infant, Newborn ,Metabolism ,medicine.disease ,Amino acid ,Mitochondrial toxicity ,Infectious Diseases ,Endocrinology ,chemistry ,Anti-Retroviral Agents ,Lactic acidosis ,Case-Control Studies ,Pediatrics, Perinatology and Child Health ,business ,medicine.drug - Abstract
While antiretroviral drugs (ARV) are generally considered safe, they have been associated with mitochondrial toxicity in experimental and clinical studies 1–4 and they have been linked to a wide range of clinical problems in children including lactic acidosis, acute liver injury and myopathy5. The focus of mitochondrial toxicity investigations has been on the effects of nucleoside/nucleotide reverse transcriptase inhibitors (NRTIs) effects on oxidative phosphorylation (OXPHOS) through inhibition of the mitochondrial polymerase gamma6. In children, there is evidence that exposure to NRTIs in utero and in the newborn period causes lactic acidosis and abnormal mitochondria number and function7 and that dysfunction may persist after the exposure ends, potentially affecting growth and development8. Despite the fact that many pathways of intermediary metabolism (including fatty acid oxidation, organic acid metabolism and amino acid metabolism) are dependent on normal OXPHOS and dysfunction of these steps can lead to clinical problems such as those seen in ARV-exposed patients 9,10, there is little known in humans about whether these pathways are points of ARV toxicity. In the last decade, the number of metabolic disorders (or inborn errors of metabolism) included in newborn screening (NBS) panels in the United States has increased dramatically due to the implementation of tandem mass spectrometry (MS/MS) 11. MS/MS is a sensitive and specific method for the quantitation of the substrates and products of intermediary metabolism, including acylcarnitines and amino acids, abnormal levels of which indicate dysfunctional fatty acid oxidation/organic acid metabolism or amino acid metabolism, respectively12. Levels of acylcarnitines and amino acids can also be abnormal in patients with inherited mitochondrial diseases representing secondary dysfunction in metabolic pathways biochemically related to OXPHOS 13. We hypothesized that HIV/ARV-exposed children would have disruption of metabolic pathways that are normally dependant on functional OXPHOS leading to a greater incidence of positive newborn metabolic screens compared to the general newborn population. We then specifically assessed fatty acid oxidation/organic acid metabolism in a group of HIV/ARV-exposed infants and a group of HIV-exposed/ARV-unexposed infants by measuring acylcarnitine levels in plasma.
- Published
- 2012
50. Contributors
- Author
-
Rajiv Agarwal, Martin J. Andersen, John R. Asplin, George L. Bakris, Daniel Batlle, Tomas Berl, Scott D. Bieber, Daniel C. Cattran, Devasmita Choudhury, Rolando Claure-Del Granado, Byron P. Croker, Bradley M. Denker, Vimal K. Derebail, Robert J. Desnick, Christiane Drechsler, Alfonso Eirin, Garabed Eknoyan, Mohsen El Kossi, Meguid El Nahas, William J. Elliott, David H. Ellison, Uta Erdbruegger, Angela Alonso Esteve, Fernando C. Fervenza, Robert A. Figlin, Mony Fraer, Eli A. Friedman, Debbie S. Gipson, Patrick E. Gipson, Stanley Goldfarb, Joyce M. Gonin, Ryan S. Griffiths, Mitchell L. Halperin, Marie C. Hogan, Edward J. Horwitz, Susan Hou, Ashley B. Irish, J. Ashley Jefferson, Kamyar Kalantar-Zadeh, Kamel S. Kamel, Elaine S. Kamil, B.S. Kawar, Brian Kirmse, Csaba P. Kovesdy, Warren Kupin, Michael R. Lattanzio, Edgar V. Lerma, Moshe Levi, Edmund J. Lewis, Stuart L. Linas, Etienne Macedo, Supriya Maddirala, David Martins, Rajnish Mehrotra, Ravindra L. Mehta, Maria Valentina Irazabal Mira, Snesha Modi, Rebecca Moore, Patrick H. Nachman, Lavinia A. Negrea, Lindsay E. Nicolle, Marina Noris, Keith C. Norris, Anna Oliveras, Ali J. Olyaei, Sumanta Kumar Pal, Paul M. Palevsky, Biff F. Palmer, Ami M. Patel, Mark A. Perazella, Sarah Prichard, Mahboob Rahman, C. Venkata S. Ram, Madhav V. Rao, Vijaykumar M. Rao, Guiseppe Remuzzi, Michael V. Rocco, Claudio Ronco, Ally Rosen, Mitchell H. Rosner, Michael R. Rudnick, Earl H. Rudolph, Jose F. Rueda, Ernesto Sabath, John R. Sedor, Anuja Pradip Shah, William L. Simpson, Rajalingam Sinniah, James A. Sloand, Mathew D. Sorensen, Stuart M. Sprague, Lesley A. Stevens, John B. Stokes, Marshall L. Stoller, Lynda Anne M. Szczech, Jeffrey Thomas, C. Craig Tisher, Vicente Torres, Howard Trachtman, Cynthia Tsien, Meryem Tuncel, Neil Turner, Suneel M. Udani, Beth A. Vogt, Christoph Wanner, Matthew R. Weir, William L. Whittier, Eleri Williams, Jay B. Wish, Florence Wong, and Yalemzewd Woredekal
- Published
- 2012
Catalog
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