1,002 results on '"Biochemical Activity"'
Search Results
2. Clinical Significance of Pheochromocytoma Size on the Timing and Extent of Surgery.
- Author
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Abou Azar, Sara, Stratton, Lee, Memeh, Kelvin, Nordgren, Rachel, Kaplan, Edwin L., Angelos, Peter, and Keutgen, Xavier M.
- Subjects
- *
PHEOCHROMOCYTOMA , *RECEIVER operating characteristic curves - Abstract
Elevated metanephrine and catecholamine levels 3-fold upper limit of normal (ULN) are diagnostic for pheochromocytoma. We sought to determine whether size correlates with biochemical activity or symptoms which could guide timing of surgery. Data from consecutive patients undergoing adrenalectomy for pheochromocytoma at our institution over a 10-year period were retrospectively collected. These included maximal lesion diameter on preoperative imaging, plasma/urine metanephrine and/or catecholamine levels, demographic variables and presence of typical paroxysmal symptoms. Receiver operating characteristic curves were used to assess predictive accuracy. Sixty-three patients were included in the analysis (41 females and 22 males). Median age was 56 (43, 69) years. Due to various referring practices, 31 patients had documented 24-h urine metanephrine, 26 had 24-h urine catecholamine, and 52 had fractionated plasma metanephrine levels available for review. Values were converted to fold change compared to ULN and the maximum of all measured values was used for logistic regression. Median tumor size was 3.40 (2.25, 4.55) cm in greatest dimension. Tumor size at which pheochromocytoma produced > 3-fold ULN was ≥2.3 cm (AUC of 0.84). Biochemical activity increased with doubling tumor size (odds ratio = 8, P = 0.0004) or ≥ 1 cm increase in tumor size (odds ratio = 3.03, P = 0.001). 40 patients had paroxysmal symptoms, but there was no significant correlation between tumor size/biochemical activity and symptoms. In our study, tumor size directly correlated with the degree of biochemical activity and pheochromocytomas ≥2.3 cm produced levels 3 times ULN. These findings may allow clinicians to adjust timing of operative intervention. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. Sustainable Restoration of Soil Functionality in PTE-Affected Environments: Biochar Impact on Soil Chemistry, Microbiology, Biochemistry, and Plant Growth.
- Author
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Garau, Matteo, Castaldi, Paola, Pinna, Maria Vittoria, Diquattro, Stefania, Cesarani, Alberto, Mangia, Nicoletta P., Vasileiadis, Sotirios, and Garau, Giovanni
- Subjects
- *
SOIL chemistry , *SOIL restoration , *BIOCHAR , *PLANT growth , *MICROBIOLOGY - Abstract
Biochar can be useful for the functional recovery of soils contaminated with potentially toxic elements (PTEs), even if its effectiveness is variable and sometimes limited, and conflicting results have been recently reported. To shed some light on this regard, softwood-derived biochar was added at 2.5 (2.5-Bio) and 5.0% w/w (5.0-Bio) rates to an acidic (pH 5.74) soil contaminated by Cd (28 mg kg−1), Pb (10,625 mg kg−1), and Zn (3407 mg kg−1). Biochar addition increased soil pH, available P and CEC, and reduced labile Cd, Pb, and Zn (e.g., by 27, 37, and 46% in 5.0-Bio vs. the unamended soil). The addition of biochar did not change the number of total heterotrophic bacteria, actinomycetes, and fungi, while it reduced the number of Pseudomonas spp. and soil microbial biomass. Dehydrogenase activity was reduced in amended soils (e.g., by ~60 and 75% in 2.5- and 5.0-Bio, respectively), while in the same soils, urease increased by 48 and 78%. Approximately 16S rRNA gene amplicon sequencing and the Biolog community-level physiological profile highlighted a significant biochar impact (especially at a 5% rate) on soil bacterial diversity. Tomato (but not triticale) yield increased in the amended soils, especially in 2.5-Bio. This biochar rate was also the most effective at reducing Cd and Pb concentrations in shoots. Overall, these results demonstrate that 2.5% (but not 5.0%) biochar can be useful to restore the soil chemical fertility of PTE-polluted soils with limited (or null) impact on soil microbial and biochemical parameters. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
4. Selection and biocontrol efficiency of Trichoderma isolates against Rhizoctonia root rot and their growth promotion effects on strawberry plants.
- Author
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Mirzaeipour, Zahra, Bazgir, Eidi, Zafari, Doustmorad, and Darvishnia, Mostafa
- Subjects
ROOT rots ,STRAWBERRIES ,ROOT growth ,TRICHODERMA ,PLANT defenses ,RHIZOCTONIA ,BIOLOGICAL pest control agents - Abstract
Strawberry root rot caused by Rhizoctonia spp. is a serious threat to strawberry production worldwide. Some Trichoderma isolates have been used in agriculture as biocontrol agents against phytopathogens, and as plant growth promoting biostimulants. In the present study, using selective medium, a total of 200 isolates of Trichoderma were isolated from soil samples collected from diverse geographical regions of the Lorestan Province, Iran. The in vitro and in vivo antagonistic potential of Trichoderma isolates were evaluated against R. solani isolated from diseased strawberry plants, and their growth promoting potential on strawberry plants were tested. The isolates with higher percentage of growth inhibition in the dual culture test were selected and identified based on morphological, molecular and phylogenetic analysis combined of ITS region and tef1 gene sequences. Ten superior antagonistic isolates, which suppressed colony growth of R. solani by 45–62.5%, were tested in vitro for the production of volatile metabolites. All selected isolates produced volatile metabolites and reduced mycelial growth of R. solani from 21 to 74%. LT140 and LT8, and LT9 decreased 67.8, 64.2 and 57.1% strawberry root rot incidence, respectively. Higher shoot height and dry weight were recorded by these three isolates, while the maximum root length and dry weight recorded for LT7, in both pathogen inoculated and non-inoculated treated soils. All isolates considerably increased peroxidase, catalase, phenol, chlorophyll and proline activities, which play important roles in plant defense mechanisms. It is concluded that these Trichoderma isolates are efficient agents to control Rhizoctonia root rot of strawberry. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
5. What the Wild Things Do: Mechanisms of Plant Host Manipulation by Bacterial Type III-Secreted Effector Proteins
- Author
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Schreiber, Karl J, Chau-Ly, Ilea J, and Lewis, Jennifer D
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Microbiology ,Medical Microbiology ,Biomedical and Clinical Sciences ,Biological Sciences ,Infectious Diseases ,Emerging Infectious Diseases ,Aetiology ,2.2 Factors relating to the physical environment ,2.1 Biological and endogenous factors ,Infection ,type III secreted effector ,biochemical activity ,Pseudomonas syringae ,Ralstonia ,Xanthomonas ,virulence promotion ,effector-triggered immunity ,host activation ,host targets ,Medical microbiology - Abstract
Phytopathogenic bacteria possess an arsenal of effector proteins that enable them to subvert host recognition and manipulate the host to promote pathogen fitness. The type III secretion system (T3SS) delivers type III-secreted effector proteins (T3SEs) from bacterial pathogens such as Pseudomonas syringae, Ralstonia solanacearum, and various Xanthomonas species. These T3SEs interact with and modify a range of intracellular host targets to alter their activity and thereby attenuate host immune signaling. Pathogens have evolved T3SEs with diverse biochemical activities, which can be difficult to predict in the absence of structural data. Interestingly, several T3SEs are activated following injection into the host cell. Here, we review T3SEs with documented enzymatic activities, as well as T3SEs that facilitate virulence-promoting processes either indirectly or through non-enzymatic mechanisms. We discuss the mechanisms by which T3SEs are activated in the cell, as well as how T3SEs modify host targets to promote virulence or trigger immunity. These mechanisms may suggest common enzymatic activities and convergent targets that could be manipulated to protect crop plants from infection.
- Published
- 2021
6. Assessing and Predicting Soil Quality in Heavy Metal-Contaminated Soils: Statistical and ANN-Based Techniques
- Author
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El-Sharkawy, Mahmoud, Li, Jian, Kamal, Nourhan, Mahmoud, Esawy, Omara, Alaa El-Dein, and Du, Daolin
- Published
- 2023
- Full Text
- View/download PDF
7. Based on GC-MS Analysis: An Evaluation Activity of Some Algal Extracts Against Culex pipiens L. (Diptera: Culicidae).
- Author
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Eltak, Nourhan A., Gniedy, Noha A., Abdel-Haleem, Doaa R., and Farag, Shaimaa M.
- Subjects
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CULEX pipiens , *CIONA intestinalis , *AEDES aegypti , *MOSQUITOES , *PYRETHROIDS , *DIPTERA , *GAS chromatography/Mass spectrometry (GC-MS) , *LINOLENIC acids , *NEONICOTINOIDS - Abstract
Continual application of chemical insecticides causes a lot of environmental and health problems. Mosquitoes as vectors of diseases develop resistance toward them. Finding out safe alternatives is an urgent need. Algal extracts are a promising alternative approach as they are biodegradable and eco-friendly. The present study assessed the larvicidal efficacy of three ethanolic algal extracts (Chaetomorpha linum, Ulva intestinalis and Sargassum dentifolium) belonging to two different algal divisions against the 3rd larval instar of Culex pipiens L. (Diptera: Culicidae) under laboratory conditions. Toxicological studies showed that three species of brown and green algal extracts exhibited good larvicidal activity. Percentages of mortality increased with increasing concentrations of all algal extracts. Based on the LC50 values, C. linum (Chlorophyta) exhibited the highest larvicidal potency among the used extracts, followed by U. intestinalis (Chlorophyta) and S. dentifolium (Phaeophyta) with LC50, s of 224.45, 231.06 and 241.79 ppm, respectively, upon 48 hours exposure. GC-Mass analysis of the tested extracts revealed that the most abundant constituents in the ethanolic extracts of C. linum, U. intestinalis and S. dentifolium were palmitic acid (17.42 %), linolenic acid (23.93%) and Di-noctyl phthalate (19.03 %), respectively. The application of LC50 values of tested ethanolic algal extracts induced many biochemical and morphological aberrations in the treated C. pipiens larvae, compared to the untreated larvae. The biochemical changes were tracked through the analysis of the insect's main metabolites (carbohydrates, lipids and proteins), in addition to measuring the changes in acetylcholine esterase, GST, a- and ß-esterases after algal extracts treatment. Generally, variations were recorded in the lipid and carbohydrate after treatment with C. linum. Moreover, C. linum inhibited the activity of a and ß esterases enzymes to a great extent, compared to the untreated. Many histological abnormalities were noticed in the treated larvae. Overall, these results demonstrated that ethanolic algal extracts of C. linum, U. intestinalis and S. dentifolium might be used to control C. pipiens mosquitoes without harming humans or the environment. Hence, they could be incorporated into integrated vector management programs. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
8. Phylogeny-Related Variations in Venomics: A Test in a Subset of Habu Snakes (Protobothrops).
- Author
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Zhao, Hong-Yan, He, Na, Sun, Yan, Wang, Yong-Chen, Zhang, Hao-Bing, Chen, Hui-Hui, Zhang, Ya-Qi, and Gao, Jian-Fang
- Subjects
- *
SNAKE venom , *SNAKES , *VENOM - Abstract
We conducted a comparative analysis to unveil the divergence among venoms from a subset of Old World habu snakes (Protobothrops) in terms of venomic profiles and toxicological and enzymatic activities. A total of 14 protein families were identified in the venoms from these habu snakes, and 11 of them were shared among these venoms. The venoms of five adult habu snakes were overwhelmingly dominated by SVMP (32.56 ± 13.94%), PLA2 (22.93 ± 9.26%), and SVSP (16.27 ± 4.79%), with a total abundance of over 65%, while the subadult P. mangshanensis had an extremely low abundance of PLA2 (1.23%) but a high abundance of CTL (51.47%), followed by SVMP (22.06%) and SVSP (10.90%). Apparent interspecific variations in lethality and enzymatic activities were also explored in habu snake venoms, but no variations in myotoxicity were found. Except for SVSP, the resemblance of the relatives within Protobothrops in other venom traits was estimated to deviate from Brownian motion evolution based on phylogenetic signals. A comparative analysis further validated that the degree of covariation between phylogeny and venom variation is evolutionarily labile and varies among clades of closely related snakes. Our findings indicate a high level of interspecific variation in the venom proteomes of habu snakes, both in the presence or absence and the relative abundance of venom protein families, and that these venoms might have evolved under a combination of adaptive and neutral mechanisms. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
9. GCK exonic mutations induce abnormal biochemical activities and result in GCK-MODY.
- Author
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Tongtong Dai, Yun Yang, Juanjuan Zhang, Xiaoyu Ma, Lifen Chen, Caiping Zhang, Sheng Lv, Lin Li, Renqiao Tang, Ni Zhen, Wenli Lu, Chuanyin Li, Ronggui Hu, Yuan Xiao, and Zhiya Dong
- Subjects
MATURITY onset diabetes of the young ,GLUCOSE metabolism disorders ,UBIQUITINATION ,DIABETES in children ,MUTANT proteins ,PROTEIN stability ,GENETIC testing - Abstract
Objective: Glucokinase-maturity-onset diabetes of the young (GCK-MODY; MODY2) is a rare genetic disorder caused by mutations in the glucokinase (GCK) gene. It is often under- or misdiagnosed in clinical practice, but correct diagnosis can be facilitated by genetic testing. In this study, we examined the genes of three patients diagnosed with GCK-MODY and tested their biochemical properties, such as protein stability and half-life, to explore the function of the mutant proteins and identify the pathogenic mechanism of GCK-MODY. Methods: Three patients with increased blood glucose levels were diagnosed with MODY2 according to the diagnostic guidelines of GCK-MODY proposed by the International Society for Pediatric and Adolescent Diabetes (ISPAD) in 2018. Nextgeneration sequencing (whole exome detection) was performed to detect gene mutations. The GCK gene and its mutations were introduced into the pCDNA3.0 and pGEX-4T-1 vectors. Following protein purification, enzyme activity assay, and protein immunoblotting, the enzyme activity of GCK was determined, along with the ubiquitination level of the mutant GCK protein. Results: Genetic testing revealed three mutations in the GCK gene of the three patients, including c.574C>T (p.R192W), c.758G>A (p.C253Y), and c.794G>A (p.G265D). The biochemical characteristics of the protein encoded by wildtype GCK and mutant GCK were different, compared to wild-type GCK, the enzyme activity encoded by the mutant GCK was reduced, suggesting thermal instability of the mutant GST-GCK. The protein stability and expression levels of the mutant GCK were reduced, and the enzyme activity of GCK was negatively correlated with the levels of fasting blood glucose and HbA1c. In addition, ubiquitination of the mutant GCK protein was higher than that of the wildtype, suggesting a higher degradation rate of mutant GCK than WT-GCK. Conclusion: GCK mutations lead to changes in the biochemical characteristics of its encoded proteins. The enzyme activities, protein expression, and protein stability of GCK may be reduced in patients with GCK gene mutations, which further causes glucose metabolism disorders and induces MODY2. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
10. Sustainable Restoration of Soil Functionality in PTE-Affected Environments: Biochar Impact on Soil Chemistry, Microbiology, Biochemistry, and Plant Growth
- Author
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Matteo Garau, Paola Castaldi, Maria Vittoria Pinna, Stefania Diquattro, Alberto Cesarani, Nicoletta P. Mangia, Sotirios Vasileiadis, and Giovanni Garau
- Subjects
biochar ,labile PTE ,soil culturable microorganisms ,soil bacterial diversity ,biochemical activity ,plant growth ,Physical geography ,GB3-5030 ,Chemistry ,QD1-999 - Abstract
Biochar can be useful for the functional recovery of soils contaminated with potentially toxic elements (PTEs), even if its effectiveness is variable and sometimes limited, and conflicting results have been recently reported. To shed some light on this regard, softwood-derived biochar was added at 2.5 (2.5-Bio) and 5.0% w/w (5.0-Bio) rates to an acidic (pH 5.74) soil contaminated by Cd (28 mg kg−1), Pb (10,625 mg kg−1), and Zn (3407 mg kg−1). Biochar addition increased soil pH, available P and CEC, and reduced labile Cd, Pb, and Zn (e.g., by 27, 37, and 46% in 5.0-Bio vs. the unamended soil). The addition of biochar did not change the number of total heterotrophic bacteria, actinomycetes, and fungi, while it reduced the number of Pseudomonas spp. and soil microbial biomass. Dehydrogenase activity was reduced in amended soils (e.g., by ~60 and 75% in 2.5- and 5.0-Bio, respectively), while in the same soils, urease increased by 48 and 78%. Approximately 16S rRNA gene amplicon sequencing and the Biolog community-level physiological profile highlighted a significant biochar impact (especially at a 5% rate) on soil bacterial diversity. Tomato (but not triticale) yield increased in the amended soils, especially in 2.5-Bio. This biochar rate was also the most effective at reducing Cd and Pb concentrations in shoots. Overall, these results demonstrate that 2.5% (but not 5.0%) biochar can be useful to restore the soil chemical fertility of PTE-polluted soils with limited (or null) impact on soil microbial and biochemical parameters.
- Published
- 2023
- Full Text
- View/download PDF
11. Revealing the genetic diversity and population structure in Aegilops crassa and Aegilops cylindrica species using molecular markers and physio-chemical traits.
- Author
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Daneshvar, Zahra, Omidi, Mansour, Etminan, Alireza, and Ebrahimi, Asa
- Subjects
GENETIC variation ,AEGILOPS ,PHOTOSYNTHETIC pigments ,CATALASE ,MICROSATELLITE repeats ,GUAIACOL ,STATISTICAL correlation - Abstract
In this work, we evaluated genetic diversity and population structure in eighty-eight Aegilops accessions using several physio-chemical traits such as shoot fresh and dry biomasses (SFW and SDW), photosynthetic pigments and activity of several antioxidant enzymes such as catalase, guaiacol peroxidase, peroxidase, and ascorbate peroxidase (APX), as well as 24 simple sequence repeat markers (SSR) under two control and water deficit stress conditions. The results indicated that water deficit stress dramatically affected SFW, SDW and photosynthetic pigments, while activity of all antioxidant enzymes were increased by water deficit stress compared to the control conditions. Statistical analysis of the phenotypic data showed a significant level of variation among the 88 investigated accessions. The results of correlation analysis showed that under both conditions photosynthetic pigments had a significant correlation with each other. The correlation between SDW and the activity of APX was positive and significant. The results of AMOVA using 24 SSR markers revealed that the genetic diversity observed among populations is more than within populations. Multivariate analyses grouped all investigated accessions in the clear groups based on their genomic constitutions. Based on results, 17 and 16 markers showed significant association with the measured traits under control and water deficit stress conditions, respectively. Our findings showed eight MTAs showed sufficiently stable expression across both control and stress conditions. Furthermore, several markers, especially Xgwm-455 associated with multiple traits across both conditions. In conclusion, these results could contribute to completing knowledge of the genetics and breeding for key physio-chemical properties. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
12. Differences between Two Groups of Burmese Vipers (Viperidae: Azemiops) in the Proteomic Profiles, Immunoreactivity and Biochemical Functions of Their Venoms.
- Author
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Zheng, Si-Rui, Sun, Yan, Zhao, Hong-Yan, Wen, Lin, Ji, Xiang, and Gao, Jian-Fang
- Subjects
- *
SNAKE venom , *VENOM , *VIPERIDAE , *PROTEOMICS , *MOLECULAR weights , *ANTIVENINS , *POISONS , *PIT vipers - Abstract
Two recently revised Azemiops snakes with apparent differences in their external appearances and skeletal morphologies but unclear genetic boundaries have been proposed. Some researchers have refrained from using the newly proposed taxonomy because these two "species" might be two clades corresponding to different geographical populations of Azemiops feae. To improve the understanding of the kinship of these two Burmese viper groups, more of their characteristics should be explored in depth. We performed a comparative analysis of the proteomic profiles and biochemical activities of snake venoms from these two groups (Sichuan A. feae and Zhejiang A. feae) and evaluated the immunorecognition capacity of commercial antivenoms toward them. Eight protein families were identified in venoms from these two groups, while phospholipase B was only detected in venom from Sichuan A. feae. These protein families displayed varying degrees of differences in relative abundance between venoms, and phospholipase A2 (Sichuan A. feae: 57.15%; Zhejiang A. feae: 65.94%) was the predominated component. Gloydius brevicaudus antivenom exhibited the strongest capacity to immunologically recognize these two venoms, but this was mainly limited to components with high molecular masses, some of which differed between venoms. Additionally, Zhejiang A. feae venom was more toxic than Sichuan A. feae venom, and the venoms expressed remarkable differences in enzymatic activities, probably resulting from the variation in the relative abundance of specific protein families. Our findings unveil differences between the two Burmese viper groups in terms of proteomic profiles, immunoreactivity, and the biochemical functions of their venoms. This information will facilitate the management of snakebites caused by these snakes. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
13. Nanosecond‐pulsed microbubble plasma reactor for plasma‐activated water generation and bacterial inactivation.
- Author
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Man, Chenxi, Zhang, Cheng, Fang, Haiqin, Zhou, Renwu, Huang, Bangdou, Xu, Yuanzhong, Zhang, Xiaoxing, and Shao, Tao
- Subjects
- *
BACTERIAL inactivation , *PLASMA chemistry , *ESCHERICHIA coli , *REACTIVE oxygen species , *FUSION reactors , *REACTIVE nitrogen species - Abstract
In this study, a microbubble‐enabled plasma reactor driven by a nanosecond‐pulsed generator was developed to provide an effective means for transferring highly reactive plasma species into liquids for plasma‐activated water (PAW) production. The physicochemical characteristics of PAW at different temperatures were evaluated, and the corresponding antimicrobial effects of PAW against Escherichia coli cells were investigated. Results show that the microbubble‐enabled PAW at a lower temperature (10°C) had the highest antimicrobial activity, resulting in a 2.43 ± 1.02‐log10 reduction of E. coli in PAW. The excellent energy efficiency of the total reactive oxygen and nitrogen species production in PAW is 10.37 g kW−1 h−1. Overall, this study provides much‐needed insights into the microbubble‐enabled plasma chemistries for optimizing the biochemical activity of PAW. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
14. Phylogeny-Related Variations in Venomics: A Test in a Subset of Habu Snakes (Protobothrops)
- Author
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Hong-Yan Zhao, Na He, Yan Sun, Yong-Chen Wang, Hao-Bing Zhang, Hui-Hui Chen, Ya-Qi Zhang, and Jian-Fang Gao
- Subjects
Protobothrops ,venom proteome ,biochemical activity ,phylogenetic signal ,interspecific variation ,Medicine - Abstract
We conducted a comparative analysis to unveil the divergence among venoms from a subset of Old World habu snakes (Protobothrops) in terms of venomic profiles and toxicological and enzymatic activities. A total of 14 protein families were identified in the venoms from these habu snakes, and 11 of them were shared among these venoms. The venoms of five adult habu snakes were overwhelmingly dominated by SVMP (32.56 ± 13.94%), PLA2 (22.93 ± 9.26%), and SVSP (16.27 ± 4.79%), with a total abundance of over 65%, while the subadult P. mangshanensis had an extremely low abundance of PLA2 (1.23%) but a high abundance of CTL (51.47%), followed by SVMP (22.06%) and SVSP (10.90%). Apparent interspecific variations in lethality and enzymatic activities were also explored in habu snake venoms, but no variations in myotoxicity were found. Except for SVSP, the resemblance of the relatives within Protobothrops in other venom traits was estimated to deviate from Brownian motion evolution based on phylogenetic signals. A comparative analysis further validated that the degree of covariation between phylogeny and venom variation is evolutionarily labile and varies among clades of closely related snakes. Our findings indicate a high level of interspecific variation in the venom proteomes of habu snakes, both in the presence or absence and the relative abundance of venom protein families, and that these venoms might have evolved under a combination of adaptive and neutral mechanisms.
- Published
- 2023
- Full Text
- View/download PDF
15. The Ecological Status of Soils of Ust'-Ilimsk (Irkutsk Oblast).
- Author
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Naprasnikova, E. V. and Sorokovoi, A. A.
- Subjects
SODIC soils ,URBAN soils ,SOILS ,SOIL acidity ,SOIL mapping ,ZONING - Abstract
Abstract—Experimental investigations were made into the basicity–acidity indices (pH) and soil biochemical activity (SBA) in the industrial city of Ust'-Ilimsk in conditions of Eastern Siberia. A cartographic representation of the distribution of values of integral indicators of soils in the city is presented for the first time. The significance of the method of mapping urban soils that are experiencing urbanization and technogenesis is emphasized. The investigation was made by using the express method of determining the soil biochemical activity. In addition to this indicator, pH conditions of soils were identified. The study encompassed the main functional zones of two parts of Ust'-Ilimsk: the Old Town (Levoberezhie) and the New Town (Pravoberezhie). The neutral and weakly alkaline soils are of widespread occurrence on the territory. The pH values vary from 7.4 to 7.8; in the control soils, they vary from 6.3 to 6.9. A significant area of the city (43.9%) is occupied by weakly alkaline soils. The level of soil biochemical activity permitted us to categorize the soils as active and very active. The proportion of very active soils makes up 32.9% of the total territory of the city. This indicates a trend of ecological regression, namely a loss of a biogenic element, nitrogen. The study revealed trends of a weak but positive dependence of SBA on pH. The coefficients of approximation are positive and vary, according to the zones of the city, from 0.2 to 0.5. The absolute and relative distribution of the areas with pH and SBA values is shown. A comparative analysis of data revealed a difference of the Ust'-Ilimsk soils from the soils in other cities of the Angara region. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
16. Biochemical activity and bioassay on maize seedling of selected indigenous phosphate-solubilizing bacteria isolated from the acid soil ecosystem
- Author
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Fitriatin Betty Natalie, Fauziah Dita, Fitriani Fabira Nur, Ningtyas Dewi Nurma, Suryatmana Pujawati, Hindersah Reginawanti, Setiawati Mieke Rochimi, and Simarmata Tualar
- Subjects
biochemical activity ,bioassay ,psb ,indigenous ,acid soils ,ultisols ,Agriculture ,Agriculture (General) ,S1-972 - Abstract
Phosphorus availability is the major constraint for plant growth in the acid soil ecosystem, due to high fixation by Al and Fe. Microbial fertilizers such as phosphate-solubilizing bacteria (PSB) can increase P availability in soils for root uptake. The objective of the research was to verify the ability of four isolates of PSB isolated from acid soil to solubilize unavailable inorganic phosphate, produce phosphatase, malic acid and indole acetic acid (IAA), as well as increase plant height of maize seedling. The bioassay by growing maize seedling in liquid nutrients has been performed to study the response of seedling to PSB inoculation. The experimental design of bioassay was a randomized block design with five replications. The results showed that the isolates RR 1 and SPR 4 had a relatively high solubilizing index. Moreover, all the PSB isolates had the ability to produce phosphatase and IAA and dissolve P. The performance of PSB-inoculated seedling was better visually and the root length was increased by 66.7–74.5% compared to the control. This result concludes that the species of four isolates needs to be identified by a biomolecular method and formulated as biofertilizers for increasing the maize productivity in the acid soil ecosystem.
- Published
- 2020
- Full Text
- View/download PDF
17. Quick selenium accumulation in the selenium-rich rice and its physiological responses in changing selenium environments
- Author
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Yuanke Liang, Yang Su, Ling Li, Xin Huang, Faiz Hussain Panhwar, Tengda Zheng, Zhichen Tang, Hla Hla Ei, Muhammad Umer Farooq, Rui Zeng, Yujie Zhang, Xiaoying Ye, Xiaomei Jia, Lanlan Zheng, and Jianqing Zhu
- Subjects
Sodium selenate ,Biochemical activity ,Physiology ,Selenium-rich rice ,Botany ,QK1-989 - Abstract
Abstract Background The element selenium (Se) deficiency is thought to be a global human health problem, which could disperse by daily-supplement from Se-rich food. Increasing the accumulation of Se in rice grain is an approach matched to these nutrient demands. Nonetheless, Se is shown to be essential but also toxic to plants, with a narrow margin between deficiency and toxicity. Notably, the regulatory mechanism balancing the accumulation and tolerance of Se in Se-rich rice plants remains unknown. Results In this study, we investigated the phenotypical, physiological, and biochemical alterations of Se-rich rice in the exposure to a variety of Se applications. Results showed that the Se-rich rice was able to accumulate more abundance of Se from the root under a low Se environment comparing to the Se-free rice. Besides, excessive Se led to phytotoxic effects on Se-rich rice plants by inducing chlorosis and dwarfness, decreasing the contents of antioxidant, and exacerbating oxidative stresses. Furthermore, both phosphate transporter OsPT2 and sulfate transporters OsSultr1;2 may contribute to the uptake of selenate in rice. Conclusions Se-rich red rice is more sensitive to exogenous application of Se, while and the most effective application of Se in roots of Se-rich rice was reached in 20 μM. Our findings present a direct way to evaluate the toxic effects of Se-rich rice in the Se contaminated field. Conclusively, some long-term field trial strategies are suggested to be included in the evaluation of risks and benefits within various field managements.
- Published
- 2019
- Full Text
- View/download PDF
18. A MULTIFACETED APPROACH TO ASSESSING THE EFFECTIVENESS OF REMEDIATING OIL-CONTAMINATED SOILS
- Author
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O. Z. Eremchenko, N. V. Moskvina, N. V. Mitrakova, E. G. Efimik, and I. E. Shestakov
- Subjects
biochemical activity ,ecosystem services ,meadow vegetation ,oil pollution ,phytotesting ,remediation ,technosol ,self-overgrowth ,toxicity ,Ecology ,QH540-549.5 - Abstract
Soil quality is its ability to perform the most important ecological functions, determining the conditions for the existence of biota and the quality of adjacent spheres – water and air. This article is devoted to the study of the remediated area after oil pollution, subject to overgrowing. A comprehensive assessment of the ability of the remediated soil to provide ecosystem services has been conducted. The properties of the remediated soil were assessed with traditional physicochemical methods. The ability of the established Technosol to create ecosystem services was assessed by microbiological activity, the composition of vegetation on the site, as well as by phytotesting to determine the redox activity of the test culture. Technosol properties (pH, organic carbon content, catalase activity, CO2 efflux) varied greatly within the remediated area, which was also reflected in the phytotesting results. In certain areas of the investigated territory Technosol had a good ecological state, but in other areas it had a satisfactory and unsatisfactory state with moderate to severe toxicity. The residual content of oil products in the layer of 20–50 cm under the brought soil had a negative effect on the height of the test culture. A close correlation was established between the indicators of microbiological activity and the state of the test culture (height, weight, redox activity), together they reflected the ability of Technosol to provide ecosystem services or perform the ecological functions of the soil. Residual oil products and the associated certain toxicity did not interfere with the self-overgrowth process of Technosol.
- Published
- 2021
- Full Text
- View/download PDF
19. Pelleting and priming effect on biochemical parameters of fennel (Foeniculum vulgare) seeds
- Author
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SURYAPAL SINGH, HARSHITA SINGH, and V S MOR
- Subjects
Biochemical activity ,Fennel ,Pelleting ,Priming ,Storage ,Agriculture - Abstract
The experiment was carried out to extrapolate the effect of seed pelleting and priming on biochemical traits of fresh and stored fennel (Foeniculum vulgare Mill.) seeds in the Laboratory of Department of Seed Science and Technology, CCS Haryana Agricultural University, Hisar during 2017-19 under ambient conditions on cultivar Hisar Swarup (HF 33). Results showed that the biochemical parameters, viz. catalase, peroxidase, dehydrogenase and superoxide dismutase decreased significantly as storage period increased in all the treatments. Prior to storage in case of seed pelleting, biochemical activity was recorded highest in seeds pelleted with Captan (3 g/kg) + Imidacloprid (2 g/kg), followed by neem leaf powder (100 g/kg seeds) and KNO3 (1.0%), except peroxidase activity. Whereas, in case of priming, maximum biochemical activity was observed in seeds primed with Trichoderma viride (8 g/kg seed), followed by KNO3 (1%), neem leaf extract (10%) and Trichoderma harzianum (8 g/kg seed). At the end of experiment, biochemical activity was highest in seeds pelleted with Captan (3 g/kg) + Imidacloprid (2 g/kg) after 18 months of storage followed by KNO3 (1%), except in peroxidase activity. In case of catalase and dehydrogenase activity, seed pelleting with neem leaf powder (100 g/kg seeds) showed at par value with Captan (3 g/kg) + Imidacloprid (2 g/kg).
- Published
- 2021
- Full Text
- View/download PDF
20. Influence of tectonic faults on the conditions and properties of some components of a biogeocenosis in a subarctic area
- Author
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Vladimir Belyaev, Konstantin Bogolytsyn, Olga Brovko, Yuriy Kutinov, Nikolay Neverov, Irina Palamarchuk, Tatiana Boytsova, Dmitriy Chukhchin, Dmitriy Zhiltsov, and Natalia Gorshkova
- Subjects
lichens ,spruce ,pine ,tectonic knot ,biochemical activity ,Ecology ,QH540-549.5 - Abstract
In geoecology, the nature of the effect of tectonic faults on the environment is not well studied. The influence of natural landscapegeochemicalfactors on the state and properties of some components of biota of different hierarchical levels is studied at the intersection oftwo tectonic faults (Velsko-Ust’yanskiy tectonic knot (TK)) in the Arkhangelsk region. Two species of shrubby lichens (Cladonia stellaris Opiz.and Usnea subfloridana Stirt.) and woody plants (spruce – Picea abies L. and Scots pine – Pinus sylvestris L.) were chosen as test systems. Thefield studies were carried out at nine test sites (in the centre, on the periphery and some distance from TK – the background reference point)in different types of forest. The ash content of samples of the lichen Cladonia growing in the centre of the TK (1.12–1.22%) is double that in thecontrol area (0.56–0.58%), and for the lichen Usnea, it is seven times higher (6.82–6.99% at the centre and 0.97–1.09% in the control area). Theash content of tree bark collected at the centre of TK (1.27–1.29%) is double that at the control site (0.56–0.76%). This indicates a significantaccumulation of metals in the vegetation in the TK zone. The accumulation of heavy metals, the low water content of plants, the influenceof geomagnetic fields and other factors provoke excessive generation of active oxygen radicals and plants have various physiological,biochemical and morpho-biometric means of combating their adverse effects. The synergism of the cooperative protective action of lichenmatrix components on oxidative stress is expressed in terms of changes in biochemical parameters. At the centre of the TK, the lichenscontains up to 190 μg g−1 of ascorbic acid, whereas in the control area it does not exceed 130 μg g−1. The content of usninic acid in thecentre is 1.5–2 times higher for the Usnea subfloridana and is 1.5 times higher for Cladonia stellaris compared to the level in the control area.
- Published
- 2019
- Full Text
- View/download PDF
21. Differences between Two Groups of Burmese Vipers (Viperidae: Azemiops) in the Proteomic Profiles, Immunoreactivity and Biochemical Functions of Their Venoms
- Author
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Si-Rui Zheng, Yan Sun, Hong-Yan Zhao, Lin Wen, Xiang Ji, and Jian-Fang Gao
- Subjects
venom ,Azemiops ,taxonomy ,proteome ,biochemical activity ,Medicine - Abstract
Two recently revised Azemiops snakes with apparent differences in their external appearances and skeletal morphologies but unclear genetic boundaries have been proposed. Some researchers have refrained from using the newly proposed taxonomy because these two “species” might be two clades corresponding to different geographical populations of Azemiops feae. To improve the understanding of the kinship of these two Burmese viper groups, more of their characteristics should be explored in depth. We performed a comparative analysis of the proteomic profiles and biochemical activities of snake venoms from these two groups (Sichuan A. feae and Zhejiang A. feae) and evaluated the immunorecognition capacity of commercial antivenoms toward them. Eight protein families were identified in venoms from these two groups, while phospholipase B was only detected in venom from Sichuan A. feae. These protein families displayed varying degrees of differences in relative abundance between venoms, and phospholipase A2 (Sichuan A. feae: 57.15%; Zhejiang A. feae: 65.94%) was the predominated component. Gloydius brevicaudus antivenom exhibited the strongest capacity to immunologically recognize these two venoms, but this was mainly limited to components with high molecular masses, some of which differed between venoms. Additionally, Zhejiang A. feae venom was more toxic than Sichuan A. feae venom, and the venoms expressed remarkable differences in enzymatic activities, probably resulting from the variation in the relative abundance of specific protein families. Our findings unveil differences between the two Burmese viper groups in terms of proteomic profiles, immunoreactivity, and the biochemical functions of their venoms. This information will facilitate the management of snakebites caused by these snakes.
- Published
- 2022
- Full Text
- View/download PDF
22. Effect of Species Composition on Polycyclic Aromatic Hydrocarbon (PAH) Accumulation in Urban Forest Soils of Krakow.
- Author
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Lasota, Jarosław, Łyszczarz, Stanisław, Kempf, Piotr, Kempf, Marta, and Błońska, Ewa
- Subjects
URBAN soils ,POLYCYCLIC aromatic hydrocarbons ,FOREST soils ,NUTRIENT cycles ,SPECIES ,DECIDUOUS plants - Abstract
Polycyclic aromatic hydrocarbons (PAHs) are among the most hazardous organic pollutants due to their toxic, carcinogenic, mutagenic properties, wide distribution, recalcitrance and stability in the environment. The study objective is to determine the impact of the species composition of tree stands on PAH accumulation in urban forest soils of Krakow. The study compared the impact of deciduous and coniferous species on similar soils on PAH biodegradation. Basic physicochemical properties, activity of enzymes involved in the nutrient cycle and PAH content were measured in soil samples. Our study shows lower accumulation of PAHs in soils with deciduous tree stands, which are characterized by higher pH and higher biochemical activity expressed by enzymatic activity. There is statistically significant difference in the enzymatic activity in the soils of deciduous tree stands, which results in differences in PAH accumulation. Among the studied deciduous species, soils with Norway maple and locust were characterized by highest enzymatic activity. At the same time, soils under these species were characterized by the lowest PAH accumulation. Among the coniferous species, highest PAH accumulation was observed under pine and spruce, where low enzymatic activity was observed at the same time. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
23. Additives as a Support Structure for Specific Biochemical Activity Boosts in Anaerobic Digestion: A Review
- Author
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Kunwar Paritosh, Monika Yadav, Aakash Chawade, Dinabandhu Sahoo, Nupur Kesharwani, Nidhi Pareek, and Vivekanand Vivekanand
- Subjects
additives ,syntrophy ,methane ,biochemical activity ,anaerobic digestion ,inhibition ,General Works - Abstract
Anaerobic digestion is an attractive technology for resource management of organic waste and stubble. The state of biochemical reactions and activities in anaerobic digestion determines the process stability. Biochemical activities, such as syntrophic, metabolic, catalytic, and enzymatic activities, regulate the anaerobic efficiency for improved methane yield. Inhibitors, such as access to volatile fatty acids, ammonia, sulfur, and heavy metals, may slow down the anaerobic digestion and may cause reactor failure. However, additives for various biochemical activities may help to diminish the effect of inhibitors as well as improve process stability for enhanced methane yield. This manuscript presents an overview of various additives for enhancing the biochemical activities. The overview consists of the application of (a) conductive material for improving syntrophic activity, (b) trace metals for metabolic activities, (c) nanoparticles for improving catalytic activity, metabolism, and symbiosis during AD, (d) biological additives for enzymatic action, and (e) application of zeolite for introducing cation exchange properties in anaerobic digestion. Also, a comparison of various additives as per biochemical activity has also been performed for a deeper insight into the application of additives in anaerobic digestion.
- Published
- 2020
- Full Text
- View/download PDF
24. The ameliorative effects of exogenously applied proline on physiological and biochemical parameters of wheat (Triticum aestivum L.) crop under copper stress condition
- Author
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Sibgha Noreen, Muhammad Salim Akhter, Tayyaba Yaamin, and Muhammad Arfan
- Subjects
Proline ,copper stress ,biochemical activity ,antioxidant enzymes ,PSII maximum productivity ,yield ,wheat ,Plant culture ,SB1-1110 ,Plant ecology ,QK900-989 - Abstract
The presence of significant amount of heavy metals in rivers and canals due to mixing of untreated industrial effluents is a common phenomenon, especially in developing countries. The agricultural crops are influenced by the presence of various pollutants in the sewage, being applied for irrigation purpose. The effluents containing copper affect the growth and development of crop species, thereby, ought to be mitigated by foliar spray of osmoprotectants, e.g. proline. A pot culture experiment was conducted at the University of Agriculture, Faisalabad-Pakistan during the crop season 2015–2016. The treatments consisted of (a) three wheat varieties (Punjab-96, MH-97, FSD-83), (b) two levels of copper (0, 400 µM) applied through rooting medium, and (c) two levels of proline (0, 80 mM) applied through foliar application. The treatments were arranged in a completely randomized design with four replications. The results showed that application of 400 µM copper caused a reduction in biomass accumulation, chlorophyll (‘a’ and ‘b’) contents, and eventually yield (100-grain weight). There were also significant decreases in gas exchange parameters (stomatal conductance, internal CO2 concentration), photosynthetic rate, water-use-efficiency, and transpiration rate in response to copper stress. Metal toxicity caused the maximum reduction in productivity of PSII, electron transport rate, and photochemical quenching, while higher values of non-photochemical quenching were recorded in the wheat varieties. The activities of antioxidant enzymes (superoxide dismutase, catalase, peroxidase), as well as quantities of proline, protein and calcium contents were accelerated in response to copper stress. The uptake of calcium, magnesium, and potassium constituents by plants was reduced, while assimilation of calcium was increased in plants under copper stress. However, the occurrence of negative effects on these parameters due to copper stress was mitigated by foliar spray of proline at the rate of 80 mM solution. The exogenous application of proline at the rate of 80 mM resulted in the reduction of generation of reactive oxygen species and enhanced accumulation of proline and protein contents in wheat varieties under copper stress environment.
- Published
- 2018
- Full Text
- View/download PDF
25. Effect of aluminium oxide nano- and microparticles on the functional groups of microorganisms of activated sludge.
- Author
-
Liwarska-Bizukojć, Ewa and Olejnik, Dorota
- Subjects
ALUMINUM oxide ,FUNCTIONAL groups ,INHIBITION (Chemistry) ,HETEROTROPHIC bacteria ,AMMONIA-oxidizing bacteria ,MICROORGANISMS ,METHYL parathion - Abstract
In this work the impact of aluminium oxide nanoparticles (Al
2 O3 NPs) and aluminium oxide microparticles (Al2 O3 MPs) on three functional groups of activated sludge microorganisms, that is, heterotrophic bacteria (HET), ammonium oxidizing bacteria (AOB) and nitrite-oxidizing bacteria (NOB), was studied. In order to describe it quantitatively, the degree of inhibition was calculated. Additionally, the values of Monod kinetic parameters and stoichiometric yield coefficients (YHET ) were determined for HET. Neither the biochemical activity nor specific growth rate of HET was inhibited by Al2 O3 NPs or MPs in the activated sludge system. The degree of inhibition of the biochemical activity of HET did not usually exceed 20%. At the same time, the biochemical activity of nitrifying microorganisms was significantly inhibited by both Al2 O3 NPs and MPs that was confirmed by the values of degrees of inhibition in the range from 42.6% to 84.3%. Out of the nitrifying microorganisms, the AOB were affected stronger than NOB. Al2 O3 NPs inhibited the biochemical activity of HET and nitrifying microorganisms, particularly AOB, to a higher extent than Al2 O3 MPs did. The lower values of YHET in the tests with Al2 O3 NPs or MPs than in those without their addition indicated that the presence of Al2 O3 NPs or MPs contributed to the decrease of the activated sludge biomass concentration. [ABSTRACT FROM AUTHOR]- Published
- 2020
- Full Text
- View/download PDF
26. Soil enzyme response to bisphenol F contamination in the soil bioaugmented using bacterial and mould fungal consortium.
- Author
-
Zaborowska, Magdalena, Wyszkowska, Jadwiga, and Kucharski, Jan
- Subjects
SOIL pollution ,SOIL enzymology ,ACID phosphatase ,ALKALINE phosphatase ,CONSORTIA ,OCHRATOXINS ,FUNGAL enzymes ,SOIL composition - Abstract
The concept of the study resulted from the lack of accurate data on the toxicity of bisphenol F (BPF) coinciding with the need for immediate changes in the global economic policy eliminating the effects of environmental contamination with bisphenol A (BPA). The aim of the experiment was to determine the scale of the previously unstudied inhibitory effect of BPF on soil biochemical activity. To this end, in a soil subjected to increasing BPF pressure at three contamination levels of 0, 5, 50 and 500 mg BPF kg
−1 DM, responses of soil enzymes, dehydrogenases, catalase, urease, acid phosphatase, alkaline phosphatase, arylsulphatase and β-glucosidase, were examined. Moreover, the study suggested a potentially effective way of biostimulating the soil by means of bioaugmentation with a consortium of four bacterial species: Pseudomonas umsongensis, Bacillus mycoides, Bacillus weihenstephanensis and Bacillus subtilis, and the following fungal species: Mucor circinelloides, Penicillium daleae, Penicillium chrysogenum and Aspergillus niger. It was found that BPF was a controversial BPA analogue due to the fact that it contributed to the inhibition of all the enzyme activities. Dehydrogenases proved to be the most sensitive to bisphenol contamination of the soil. The addition of 5 mg BPF kg−1 DM of soil triggered an escalation of the inhibition comparable to that for the other enzymes only after exposing them to the effects of 50 and 500 mg BPF kg−1 DM of soil. Moreover, BPF generated low activity of urease, acid phosphatase, alkaline phosphatase and β-glucosidase. Bacterial inoculum increased the activity of urease, β-glucosidase, catalase and alkaline phosphatase. Seventy-six percent of BPF underwent biodegradation during the 5 days of the study. [ABSTRACT FROM AUTHOR]- Published
- 2020
- Full Text
- View/download PDF
27. Quick selenium accumulation in the selenium-rich rice and its physiological responses in changing selenium environments.
- Author
-
Liang, Yuanke, Su, Yang, Li, Ling, Huang, Xin, Panhwar, Faiz Hussain, Zheng, Tengda, Tang, Zhichen, Ei, Hla Hla, Farooq, Muhammad Umer, Zeng, Rui, Zhang, Yujie, Ye, Xiaoying, Jia, Xiaomei, Zheng, Lanlan, and Zhu, Jianqing
- Subjects
- *
RICE , *SELENIUM , *POISONOUS plants , *RED rice , *CHLOROSIS (Plants) , *OXIDATIVE stress - Abstract
Background: The element selenium (Se) deficiency is thought to be a global human health problem, which could disperse by daily-supplement from Se-rich food. Increasing the accumulation of Se in rice grain is an approach matched to these nutrient demands. Nonetheless, Se is shown to be essential but also toxic to plants, with a narrow margin between deficiency and toxicity. Notably, the regulatory mechanism balancing the accumulation and tolerance of Se in Se-rich rice plants remains unknown. Results: In this study, we investigated the phenotypical, physiological, and biochemical alterations of Se-rich rice in the exposure to a variety of Se applications. Results showed that the Se-rich rice was able to accumulate more abundance of Se from the root under a low Se environment comparing to the Se-free rice. Besides, excessive Se led to phytotoxic effects on Se-rich rice plants by inducing chlorosis and dwarfness, decreasing the contents of antioxidant, and exacerbating oxidative stresses. Furthermore, both phosphate transporter OsPT2 and sulfate transporters OsSultr1;2 may contribute to the uptake of selenate in rice. Conclusions: Se-rich red rice is more sensitive to exogenous application of Se, while and the most effective application of Se in roots of Se-rich rice was reached in 20 μM. Our findings present a direct way to evaluate the toxic effects of Se-rich rice in the Se contaminated field. Conclusively, some long-term field trial strategies are suggested to be included in the evaluation of risks and benefits within various field managements. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
28. Evaluación de la actividad de adsorción a través de estructuras capilares de compuestos de origen fenólico en muestras de soluciones acuosas provenientes del canal arzobispo en Bogotá D.C.
- Author
-
Sandoval Herrera, Juan Andrés, Fernández Barrero, Nelson, Moreno Arce, Laura Valentina, Torres Sánchez, Gabriela, Sandoval Herrera, Juan Andrés, Fernández Barrero, Nelson, Moreno Arce, Laura Valentina, and Torres Sánchez, Gabriela
- Abstract
Teniendo en cuenta que los compuestos fenólicos son sustancias nocivas para la salud del ser humano y del medio ambiente, los cuales ingresan a los cuerpos de agua a través de los efluentes provenientes de procesos industriales o agrícolas, fue analizada la actividad de adsorción de las estructuras capilares para la remoción de estos en soluciones acuosas; se realizaron nueve experimentos, donde fue estudiado el comportamiento del tiempo y la temperatura con respecto a la absorbancia y por ende a la concentración de fenoles en muestras determinadas.
- Published
- 2023
29. Reaction of Microorganisms to Long-Term Waste Reclamation of Soil Degraded by the Sulfur Mining Industry
- Author
-
Jolanta Joniec, Grażyna Żukowska, Marta Bik-Małodzińska, Edyta Kwiatkowska, and Kamila Rojek
- Subjects
bacteria and fungi ,enzymes ,biochemical activity ,waste ,main waste ,degraded soil ,Mineralogy ,QE351-399.2 - Abstract
The research was carried out to assess soil condition many years after waste introduction for reclamation purposes. The parameters of the activity of soil microorganisms responsible for the revitalization processes in degraded soils were used in the research. Soil material was derived from the area of the former sulfur mine. The results showed that even a single waste introduction to degraded soil caused long-lasting effects in the activity of soil microorganisms. The most favorable changes were caused by the addition of sewage sludge and the use of mineral wool in the form of a pad. The application of lime alone turned out to be the least beneficial for the revitalization processes, i.e., restoring the homeostasis of biological life in degraded soil. This research is a continuation of study that concerned the initial recultivation period. The obtained research results show the need for monitoring soils reclaimed with waste, not only in the initial period but also in the following years. These results allow evaluation of the usefulness of the parameters of soil microbial activity in monitoring soil environments subjected to strong human pressure. The results can be used to assess the risks associated with the introduction of waste into the environment.
- Published
- 2021
- Full Text
- View/download PDF
30. Bioherbicides: An Eco-Friendly Tool for Sustainable Weed Management
- Author
-
Mahmudul Hasan, Muhammad Saiful Ahmad-Hamdani, Adam Mustafa Rosli, and Hafizuddin Hamdan
- Subjects
bioherbicides ,plant-based ,physiological response ,biochemical activity ,efficacy ,Botany ,QK1-989 - Abstract
Weed management is an arduous undertaking in crop production. Integrated weed management, inclusive of the application of bioherbicides, is an emerging weed control strategy toward sustainable agriculture. In general, bioherbicides are derived either from plants containing phytotoxic allelochemicals or certain disease-carrying microbes that can suppress weed populations. While bioherbicides have exhibited great promise in deterring weed seed germination and growth, only a few in vitro studies have been conducted on the physiological responses they evoke in weeds. This review discusses bioherbicide products that are currently available on the market, bioherbicide impact on weed physiology, and potential factors influencing bioherbicide efficacy. A new promising bioherbicide product is introduced at the end of this paper. When absorbed, phytotoxic plant extracts or metabolites disrupt cell membrane integrity and important biochemical processes in weeds. The phytotoxic impact on weed growth is reflected in low levels of root cell division, nutrient absorption, and growth hormone and pigment synthesis, as well as in the development of reactive oxygen species (ROS), stress-related hormones, and abnormal antioxidant activity. The inconsistency of bioherbicide efficacy is a primary factor restricting their widespread use, which is influenced by factors such as bioactive compound content, weed control spectrum, formulation, and application method.
- Published
- 2021
- Full Text
- View/download PDF
31. What the Wild Things Do: Mechanisms of Plant Host Manipulation by Bacterial Type III-Secreted Effector Proteins
- Author
-
Karl J. Schreiber, Ilea J. Chau-Ly, and Jennifer D. Lewis
- Subjects
type III secreted effector ,biochemical activity ,Pseudomonas syringae ,Ralstonia ,Xanthomonas ,virulence promotion ,Biology (General) ,QH301-705.5 - Abstract
Phytopathogenic bacteria possess an arsenal of effector proteins that enable them to subvert host recognition and manipulate the host to promote pathogen fitness. The type III secretion system (T3SS) delivers type III-secreted effector proteins (T3SEs) from bacterial pathogens such as Pseudomonas syringae, Ralstonia solanacearum, and various Xanthomonas species. These T3SEs interact with and modify a range of intracellular host targets to alter their activity and thereby attenuate host immune signaling. Pathogens have evolved T3SEs with diverse biochemical activities, which can be difficult to predict in the absence of structural data. Interestingly, several T3SEs are activated following injection into the host cell. Here, we review T3SEs with documented enzymatic activities, as well as T3SEs that facilitate virulence-promoting processes either indirectly or through non-enzymatic mechanisms. We discuss the mechanisms by which T3SEs are activated in the cell, as well as how T3SEs modify host targets to promote virulence or trigger immunity. These mechanisms may suggest common enzymatic activities and convergent targets that could be manipulated to protect crop plants from infection.
- Published
- 2021
- Full Text
- View/download PDF
32. Discovery of human lactate dehydrogenase 5 inhibitors (hLDH5) with anti-lung cancer activity through an in silico method and biological validation.
- Author
-
He, Shaozhong and Wang, Qun
- Subjects
- *
CELL death , *CANCER cells , *CANCER , *CELL proliferation , *HYPOXIA-inducible factor 1 , *HYPOXEMIA - Abstract
Human lactate dehydrogenase 5 (h LDH5) is an important metabolic enzyme playing critical roles in the anaerobic glycolysis. Herein, we employed an in silico method and biological validation to identify a novel h LDH5 inhibitor with a promising cellular activity under hypoxia condition. The identified compound 9 bound to h LDH5 with a K d value of 1.02 µM, and inhibited the enzyme with an EC 50 value of 0.7 µM. Compound 9 exhibited a weak potency against NCI-H1975 cell proliferation under normal condition (IC 50 = 36.5 µM), while dramatically increased to 5.7 µM under hypoxia condition. In line with the observation, h LDH5 expression in NCI-H1975 cell under hypoxia condition is much higher as compared to the normal oxygenated condition, indicating the h LDH5 inhibition may contribute to the cancer cell death. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
33. Protein‐Templated Dynamic Combinatorial Chemistry: Brief Overview and Experimental Protocol.
- Author
-
Hartman, Alwin M., Gierse, Robin M., and Hirsch, Anna K. H.
- Subjects
- *
COMBINATORIAL chemistry , *PROTEIN stability , *PHARMACEUTICAL chemistry , *BIOACTIVE compounds - Abstract
Dynamic combinatorial chemistry (DCC) is a powerful tool to identify bioactive compounds. This efficient technique allows the target to select its own binders and circumvents the need for synthesis and biochemical evaluation of all individual derivatives. An ever‐increasing number of publications report the use of DCC on biologically relevant target proteins. This minireview complements previous reviews by focusing on the experimental protocol and giving detailed examples of essential steps and factors that need to be considered, such as protein stability, buffer composition and cosolvents. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
34. Phylogenetic and enzymatic variability of Alternaria species isolated from various substrates in Qena governorate of Upper Egypt.
- Author
-
Hussein, Mohamed A. and Voigt, Kerstin
- Subjects
- *
ALTERNARIA , *CELLULASE , *SPECIES , *ALTERNARIA alternata - Abstract
Recently, 24 sections were characterised in the genus of Alternaria. In this work, 27 isolates of Alternaria belonging to section Alternaria were isolated from different sources in Qena governorate, Egypt. The collected strains were identified using multi-locus products of internal transcribed spacer (ITS) region, small subunit (SSU), large subunit (LSU) and Alt a1 gene. Based on four loci, the phylogenetic analysis revealed that 26 isolates (96.3% of total isolates) identified as A. alternata and the last one isolate (3.7%) as A. arborescens. The different strains of Alternaria exhibited enzymatic variability ranged from 0.1 ± 0.07–2.3 ± 0.13U/ml for cellulase and 0.6 ± 0.20–3.7 ± 0.47 U/ml (pectinase). Within A. alternata isolates, biochemical properties (Cellulase and pectinase) did not correlate either to phylogenetic analysis or strain origin. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
35. INFLUENCE OF TECTONIC FAULTS ON THE CONDITIONS AND PROPERTIES OF SOME COMPONENTS OF A BIOGEOCENOSIS IN A SUBARCTIC AREA.
- Author
-
BELYAEV, VLADIMIR, BOGOLYTSYN, KONSTANTIN, BROVKO, OLGA, KUTINOV, YURIY, NEVEROV, NIKOLAY, PALAMARCHUK, IRINA, BOYTSOVA, TATIANA, CHUKHCHIN, DMITRIY, ZHILTSOV, DMITRIY, and GORSHKOVA, NATALIA
- Subjects
BIOGEOCHEMISTRY ,MORPHOTECTONICS - Abstract
In geoecology, the nature of the effect of tectonic faults on the environment is not well studied. The influence of natural landscapegeo-chemical factors on the state and properties of some components of biota of different hierarchical levels is studied at the intersection of two tectonic faults (Velsko-Ust’yanskiy tectonic knot (TK)) in the Arkhangelsk region. Two species of shrubby lichens (Cladonia stellaris Opiz. and Usnea subfloridana Stirt.) and woody plants (spruce – Picea abies L. and Scots pine – Pinus sylvestris L.) were chosen as test systems. The field studies were carried out at nine test sites (in the centre, on the periphery and some distance from TK – the background reference point) in different types of forest. The ash content of samples of the lichen Cladonia growing in the centre of the TK (1.12–1.22%) is double that in the control area (0.56–0.58%), and for the lichen Usnea, it is seven times higher (6.82–6.99% at the centre and 0.97–1.09% in the control area). The ash content of tree bark collected at the centre of TK (1.27–1.29%) is double that at the control site (0.56–0.76%). This indicates a significant accumulation of metals in the vegetation in the TK zone. The accumulation of heavy metals, the low water content of plants, the influence of geomagnetic fields and other factors provoke excessive generation of active oxygen radicals and plants have various physiological, biochemical and morpho-biometric means of combating their adverse effects. The synergism of the cooperative protective action of lichen matrix components on oxidative stress is expressed in terms of changes in biochemical parameters. At the centre of the TK, the lichens contains up to 190 μg g
−1 of ascorbic acid, whereas in the control area it does not exceed 130 μg g−1 . The content of usninic acid in the centre is 1.5–2 times higher for the Usnea subfloridana and is 1.5 times higher for Cladonia stellaris compared to the level in the control area. [ABSTRACT FROM AUTHOR]- Published
- 2019
- Full Text
- View/download PDF
36. Effect of modified coconut shell biochar on availability of heavy metals and biochemical characteristics of soil in multiple heavy metals contaminated soil.
- Author
-
Liu, Huakang, Xu, Fei, Xie, Yanluo, Wang, Can, Zhang, Akang, Li, Lingling, and Xu, Heng
- Subjects
- *
BIOCHAR , *SOIL biodiversity , *HEAVY metal toxicology , *HEAVY metals & the environment , *ANALYSIS of heavy metals ,ENVIRONMENTAL aspects - Abstract
Abstract On account of the potential in immobilizing metals and improving soil environment, various biochar materials have been extensively applied in environmental remediation. The purpose of this experiment was to evaluate the effect of modified coconut shell biochar (MCSB) on the availability of metals and soil biological activity in multi-metals (cadmium (Cd), nickel (Ni) and zinc (Zn)) contaminated soil. MCSB was obtained from coconut shell biochar (CSB) by hydrochloric acid pickling and ultrasonication, which has significantly improved its surface functional groups and microcosmic pore structure. Sandy soil samples were incubated at 25 °C amended with MCSB or CSB by 0%, 2.5% and 5% addition for 63 days, respectively. The results showed that the acid soluble Cd, Ni and Zn decreased by 30.1%, 57.2% and 12.7%, respectively, in groups with 5% MCSB addition, which indicated MCSB had a better effect on immobilizing metals compared with CSB. In addition, higher soil biological activities were detected in different treatments compared with control (CK). Especially, the maximum bacterial number was found in 5% MCSB treatment, which increased by 149.43% compared with CK. Accordingly, our results suggested that MCSB could be used as an ameliorant to immobilize heavy metals in contaminated soils and improve soil physicochemical and biological properties. Graphical abstract Unlabelled Image Highlights • CSB was modified with diluted HCl and ultrasonication. • Modification effectively improved the microcosmic structure of CSB. • MCSB is superior to raw coconut shell biochar in soil heavy metal remediation. • MCSB is more effective than CSB on increasing soil biological activities. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
37. The ameliorative effects of exogenously applied proline on physiological and biochemical parameters of wheat (Triticum aestivum L.) crop under copper stress condition.
- Author
-
Noreen, Sibgha, Akhter, Muhammad Salim, Yaamin, Tayyaba, and Arfan, Muhammad
- Subjects
- *
PROLINE , *WHEAT , *HEAVY metals , *CROPS , *REACTIVE oxygen species , *ANTIOXIDANTS - Abstract
The presence of significant amount of heavy metals in rivers and canals due to mixing of untreated industrial effluents is a common phenomenon, especially in developing countries. The agricultural crops are influenced by the presence of various pollutants in the sewage, being applied for irrigation purpose. The effluents containing copper affect the growth and development of crop species, thereby, ought to be mitigated by foliar spray of osmoprotectants, e.g. proline. A pot culture experiment was conducted at the University of Agriculture, Faisalabad-Pakistan during the crop season 2015-2016. The treatments consisted of (a) three wheat varieties (Punjab-96, MH-97, FSD-83), (b) two levels of copper (0, 400 µM) applied through rooting medium, and (c) two levels of proline (0, 80 mM) applied through foliar application. The treatments were arranged in a completely randomized design with four replications. The results showed that application of 400 µM copper caused a reduction in biomass accumulation, chlorophyll ('a' and 'b') contents, and eventually yield (100-grain weight). There were also significant decreases in gas exchange parameters (stomatal conductance, internal CO2 concentration), photosynthetic rate, water-use-efficiency, and transpiration rate in response to copper stress. Metal toxicity caused the maximum reduction in productivity of PSII, electron transport rate, and photochemical quenching, while higher values of non-photochemical quenching were recorded in the wheat varieties. The activities of antioxidant enzymes (superoxide dismutase, catalase, peroxidase), as well as quantities of proline, protein and calcium contents were accelerated in response to copper stress. The uptake of calcium, magnesium, and potassium constituents by plants was reduced, while assimilation of calcium was increased in plants under copper stress. However, the occurrence of negative effects on these parameters due to copper stress was mitigated by foliar spray of proline at the rate of 80 mM solution. The exogenous application of proline at the rate of 80 mM resulted in the reduction of generation of reactive oxygen species and enhanced accumulation of proline and protein contents in wheat varieties under copper stress environment. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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38. СРАВНИТЕЛЬНАЯ ХАРАКТЕРИСТИКА ШТАММОВ CANDIDA TROPICALIS C РАЗЛИЧНЫМ СРОКОМ КОЛЛЕКЦИОННОГО ХРАНЕНИЯ
- Subjects
хранение микроорганизмов ,storage of microorganisms ,полиморфизм ,биохимическая активность ,biochemical activity ,Candida ,polymorphism - Abstract
Статья посвящена изучению культуральных, биохи-мических и микроморфологических особенностей штам-мов Candida tropicalis, возникающих в ходе длительного коллекционного хранения в форме пересеваемых живых культур. В качестве объектов исследования использовали 6 штаммов C. tropicalis различного срока хранения, полученных из Российской коллекции патогенных грибов (РКПГ): № Y-531, Y-543, Y-552 (поступили в РКПГ в 1957-1980 гг.), Y-1935, Y-2125, Y-2147 (поступили в РКПГ во 2-м десятилетии XXI века). Показало, что штаммы C. tropicalis с большим сроком коллекционного хранения отличаются удлиненной формой бластоспор, гиперпродукцией элементов псевдомицелия, образованием колоний преимущественно R-типа, а также расширенной сахаролитической активностью. В целом штаммы C. tropicalis проявляют полиморфизм на микроморфологическом, культуральном и биохимическом уровнях, что необходимо учитывать при идентификации этих микромицетов с использованием традиционных средств., The article is devoted to the study of cultural, biochemi-cal and micromorphological features of C. tropicalis strains that arise during long-term collection storage in the form of subcultured live cultures. 6 strains of C. tropicalis of different shelf life obtained from the Russian Collection of Pathogenic Fungi (RCPF) were used as objects of research: № Y-531, Y-543, Y-552 (received by RСPF in 1957-1980), Y-1935, Y-2125, Y-2147 (entered the RCPF in the 2nd decade of the 21st century). It was shown that strains of C. tropicalis with a long period of collection storage are distinguished by an elongated shape of blastospores, hyperproduction of pseudomycelium elements, and by the formation of predominantly R-type colonies, and also extended saccharolytic activity. In general, C. tropicalis strains exhibit polymorphism at the micromorphological, cultural, and biochemical levels, which must be taken into account when identifying these micromycetes using traditional approaches.
- Published
- 2023
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39. Soil Amendment with Biosolids and Inorganic Fertilizers: Effects on Biochemical Properties and Oxidative Stress in Basil (Ocimum basilicum L.)
- Author
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Nadia de la Portilla, Rocio Vaca, Martha E. Mora-Herrera, Liliana Salinas, Pedro del Aguila, Gustavo Yañez-Ocampo, and Jorge Lugo
- Subjects
biochemical activity ,C and N mineralization ,metabolic quotient ,organic amendment ,antioxidant capacity ,Agriculture - Abstract
We investigated changes in biochemical activity of a soil cultivated with Ocimum basilicum L. plants and in the oxidative stress of plants caused by the addition of biosolids and inorganic fertilizer. A greenhouse experiment was set up; it consisted of pots containing basil plants to which different treatments with biosolids and fertilizers were added. After 10 and 210 days of the incorporation of the treatments, both the biochemical properties and oxidative stress of the plants were evaluated. Mineralization of nitrogen (N) and respiratory activity increased with a higher dose of biosolid after 10 days of application. After 210 days, there were no changes in the mineralization of N and respiratory activity, catalase showed an increase, while microbial biomass carbon decreased. In relation to the oxidative stress, there was a decrease in the anthocyanin antioxidant capacity, and 2,2-diphenyl-1-picrylhydrazyl (DPPH), total flavonoids, and phenolic compounds were observed in soils treated with biosolids. The results indicated that the biochemical properties of the soil were favored in the presence of biosolids because they increased, especially after 10 days of application. The antioxidant capacity decreased in the presence of biosolids, which suggests that the amendment does not affect such capacity, and therefore oxidative stress could be reduced.
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- 2020
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40. Stimulating Effects of Plasma Activated Water on Growth, Biochemical Activity, Nutritional Composition and Yield of Potato (Solanum tuberosum L.)
- Author
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Mamunur Rashid Talukder, Mohammad Mamunur Rashid, Mamunur Rashid, and M. S. Alam
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Chemistry ,General Chemical Engineering ,Yield (chemistry) ,Nutritional composition ,General Chemistry ,Food science ,Biochemical Activity ,Condensed Matter Physics ,Solanum tuberosum ,Surfaces, Coatings and Films - Published
- 2021
41. Loss of YggS (COG0325) impacts aspartate metabolism in Salmonella enterica
- Author
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Diana M. Downs and Huong N. Vu
- Subjects
Transamination ,medicine.disease_cause ,Microbiology ,Article ,chemistry.chemical_compound ,medicine ,Molecular Biology ,Pyridoxal ,Transaminases ,chemistry.chemical_classification ,Aspartic Acid ,Mutation ,biology ,Salmonella enterica ,Biochemical Activity ,Pyridoxine ,biology.organism_classification ,Keto Acids ,Vitamin B 6 ,Mutagenesis, Insertional ,chemistry ,Biochemistry ,Mutagenesis ,Pyridoxal Phosphate ,Salmonella Infections ,Transposon mutagenesis ,Carrier Proteins ,Function (biology) ,medicine.drug - Abstract
YggS is a pyridoxal 5'-phosphate (PLP)-binding protein of the conserved COG0325 family. Despite a connection with vitamin B6 homeostasis in many species, neither a precise biochemical activity nor the molecular mechanism of how YggS contributes to cellular function has been described. In a transposon mutagenesis screen, we found that insertions in aspC (encoding a PLP-dependent aspartate aminotransferase, EC 2.6.1.1) in a Salmonella enterica strain lacking yggS caused a synthetic growth defect, which could be rescued by the addition of exogenous aspartate. Characterization of spontaneous suppressors which improved the growth of the yggS aspC double mutant suggested that this synthetic aspartate limitation was dependent on TyrB, a PLP-dependent aromatic amino acid aminotransferase (EC 2.6.1.57). Genetic and biochemical data were consistent with the hypothesis that TyrB activity was inhibited by accumulated pyridoxine 5'-phosphate and α-keto acids caused by a yggS mutation. This study provides data consistent with a working model implicating YggS in modulating concentrations of B6 vitamers via transamination.
- Published
- 2021
42. Визначення біохімічної активності ферменту N-ацетилтрансферази, продукції гена NAT2 у дітей з екопатологією після проведеної терапії
- Author
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N.R. Kech
- Subjects
chemistry.chemical_classification ,Pathology ,medicine.medical_specialty ,business.industry ,Urinary system ,Thyroid ,N-acetyltransferase ,Biochemical Activity ,03 medical and health sciences ,0302 clinical medicine ,Enzyme ,medicine.anatomical_structure ,Nat2 gene ,chemistry ,medicine ,General Earth and Planetary Sciences ,030212 general & internal medicine ,Densitometry ,business ,Gene ,030217 neurology & neurosurgery ,General Environmental Science - Abstract
The study of the biochemical activity of the enzyme N-acetyltransferase, NAT2 gene production in children from ecologically unfavorable regions (EUR) is extremely important to identify predisposition to environmental pathology, including thyroid, renal and urinary diseases, in a contaminated environment. An example of this region is chemically contaminated Halytskyi, Dolynskyi and Kaluskyi districts and radiologically contaminated Sniatyn district of the Ivano-Frankivsk region. We have examined 239 children from EUR and 70 children from the control group. Age of children — 3 to 18 years, sex: boys — 48 %, girls — 52 %. All children were examined clinically, they underwent instrumental (ultrasound investigation, ultrasound densitometry) and laboratory diagnosis before and after therapy. Using biochemical method, we have determined the activity of N-acetyltransferase enzyme. Low activity of the enzyme encoded by the gene NAT2, in children with environmental pathology causes their low capacity for acetylation, which is the basis for the formation of environment-related diseases of the thyroid gland, bones and kidneys in these children. Membrane-protective, antioxidant, sorption therapy and the use of calcium supplements have a pronounced positive effect on the activity of the enzyme N-acetyltransferase in the blood of the children.
- Published
- 2021
43. Chemical Structure of Stabilizing Layers of Negatively Charged Silver Nanoparticles as an Effector of Shifts in Soil Bacterial Microbiome under Short-Term Exposure
- Author
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Sebastian Wojciech Przemieniecki, Magdalena Oćwieja, Sławomir Ciesielski, Wiktor Halecki, Ewelina Matras, and Anna Gorczyca
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Ions ,Soil ,Silver ,Bacteria ,Microbiota ,Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,Metal Nanoparticles ,silver nanoparticles ,surface properties ,fungicide ,soil bacteria ,biochemical activity ,Soil Microbiology ,Fungicides, Industrial - Abstract
In this work, we have assessed the exposure of soil bacteria from potato monoculture to three types of silver nanoparticles (AgNPs) as well as silver ions (Ag+ ions) delivered in the form of silver nitrate and a commercially available fungicide. The diversity of the soil microbial community, enzymatic activity, and carbon source utilization were evaluated. It was found that only the fungicide significantly limited the abundance and activity of soil bacteria. Silver ions significantly reduced bacterial metabolic activity. In turn, one type of AgNPs prepared with the use of tannic acid (TA) increased bacterial load and activity. There was found in all AgNPs treated soils (1) a greater proportion of all types of persistent bacteria, i.e., Bacillus, Paenibacillus, and Clostridium; (2) a visible decrease in the proportion of Nocardioides, Arthrobacter, and Candidatus Solibacter; (3) almost complete depletion of Pseudomonas; (4) increase in the number of low-frequency taxa and decrease in dominant taxa compared to the control soil. Despite the general trend of qualitative changes in the bacterial community, it was found that the differences in the chemical structure of the AgNP stabilizing layers had a significant impact on the specific metabolic activity resulting from qualitative changes in the microbiome.
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- 2022
- Full Text
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44. Responses of sunflower induced by Sclerotinia sclerotiorum infection.
- Author
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Na, Ren, Luo, Yanjie, Bo, Haoyu, Zhang, Jian, Jia, Ruifang, Meng, Qinglin, Zhou, Hongyou, Hao, Jianjun, and Zhao, Jun
- Subjects
- *
COMMON sunflower , *PLANT injuries , *SCLEROTINIA sclerotiorum , *MYCOSES , *SALICYLIC acid - Abstract
Sunflower ( Helianthus annuus ) can be infected by the fungal pathogen Sclerotinia sclerotiorum, but its susceptibility varies depending on the cultivars. The aim of this study was to characterize and compare the biochemical responses between the R and the S sunflower cultivars after inoculation with S. sclerotiorum . The biochemical activities were detected by measuring necrotic cell, callose deposition, soluble protein content, as well as ROS accumulation at the infection site. Antioxidant enzymatic activities, the transcripts of ROS related genes and marker genes in pathways of salicylic acid (SA) and jasmonic acid (JA) were also quantified to characterize the responses. Results showed that compared to the S cultivar, the R cultivar was characterized having reduced number of necrotic cell, more callose deposition on the cell wall, increased soluble protein content, higher levels of H 2 O 2 and ROS scavenger enzyme activities, and upregulated transcript profile of marker genes of both SA and JA pathways. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
45. Phenotypic and Molecular Responses of Wheat (Triticum aestivum L.) to Chronic Gamma Irradiation.
- Author
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Hong, M. J., Yoon, Y. H., Kim, D. S., Kim, S. H., Kang, S. Y., Kim, D. Y., Seo, Y. W., and Kim, J. B.
- Subjects
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PHENOTYPES , *GAMMA rays , *PLANT growth , *WHEAT varieties , *GENE expression ,WHEAT genetics - Abstract
The objectives of this study were to determine the effects of chronic gamma irradiation on growth and biochemical characteristics of wheat. Wheat plants were exposed to a 60Co gamma rays at doses ranging from 10 to 150 Gy for 3 weeks. Our results indicate that irradiation at 10-15 Gy enhanced plant growth as compared to non-irradiated wheat, while at high doses (>20 Gy) a significant decrease in wheat height was recorded. APX and CAT transcript levels were higher in plant irradiated at 12.5 Gy than in the controls. Also, the enzyme activities of APX and CAT and POD were increased by 12.5 Gy gamma irradiation. Chronic irradiation caused an increase in the total anthocyanin content. To assess whether anthocyanin biosynthesis-related genes were involved in the response to chronic gamma irradiation in wheat plants, we examined their expression under different doses of gamma rays. Levels of F3H, DFR, ANS transcripts increased due to chronic gamma irradiation, whereas CHS and CHI expression decreased. Total anthocyanin contents significantly increased after chronic irradiation. Furthermore, Ultra Performance Liquid Chromatography (UPLC) revealed that cyanidin 3-glucoside, one of the anthocyanin compounds, rapidly increased in wheat plants after chronic gamma irradiation. This study demonstrated that the growth of wheat plants and markers of biochemical activity were negatively influenced by chronic gamma irradiation in a dosedependent manner, although low-dose radiation showed stimulatory effects. Results from this study are very useful for future chronic gamma irradiation studies for the improvement of wheat varieties. [ABSTRACT FROM AUTHOR]
- Published
- 2018
46. Microbial activity and habitat heterogeneity in surface soil in a high-mountain grassland landscape (Central Apennines, Italy).
- Author
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Massaccesi, Luisa, Marinari, Sara, Bellisario, Bruno, Cancellieri, Laura, Marabottini, Rosita, and Filibeck, Goffredo
- Subjects
- *
GRASSLAND soils , *ACID phosphatase , *CARBON content of water , *SILT , *ACID soils , *MOUNTAIN ecology , *REGRESSION trees - Abstract
A spatially intensive sampling of surface soil layers (81 stratified-randomized sampling points across a 14 km2 study area) was performed in a high-mountain grassland landscape (Central Apennines, Italy) in July 2017, in order to describe the heterogeneity of microbial habitats and measure their microbial enzymatic activity. Three different microbial habitat types were identified via Hierarchical Cluster Analysis on the basis of 14 (measured or remote-sensed) environmental variables (including chemical and physical soil properties, topographic and geomorphological features and vegetation cover): (i) sub-acidic, at high elevation, with high vegetation cover (of mostly acidophytic/mesophytic species) and high silt content, and the lowest clay content; (ii) sub-acidic, at low elevation, with a high vegetation cover and a very low stone cover, with the highest sand and the lowest silt content, and the highest available phosphorus; (iii) very shallow soil, mainly stone-covered, at high elevation, with the highest pH values, on steep slopes, with the highest content of organic matter and the highest water holding capacity. The third habitat showed the highest enzymatic activity (b-glucosidase, β-cellobiohydrolase and leucine-arylamidase) involved in C and N cycling, while the more acidic and deeper soils, typical of sinkhole or slope areas, favoured the acid phosphomonoesterase activity involved in P cycle thanks to the establishment of the rhizospheric activity of the herbaceous plant species. Moreover, we analysed the relative importance of environmental variables on the total enzyme activities via Boosted Regression Trees (BRT): the results highlighted - for the first time as far as we know - the importance of topographic factors such as slope inclination in predicting the microbial functional capacity in a mountain grassland ecosystem. We conclude that the different enzymatic activity patterns found in the three habitats suggest diverse microbial functions with respect to nutrient cycling, within a small landscape and a relatively homogeneous land-cover. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
47. Effects of Wastewater Irrigation on Chemical, Microbiological and Virological Status of Soil
- Author
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Zdenek, Filip, Demnerova, Katherina, and Zaidi, Mohammed K., editor
- Published
- 2007
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48. Immunological Indicators in the Evaluation of the Effectiveness of Antioxidant Therapy for GEPAVID in Chronic Heavy Metal Poisoning in the Experiment
- Author
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Editor Academic Journals &Amp; Conferences
- Subjects
inorganic chemicals ,immunological indicators ,antioxidant therapy ,fungi ,GEPAVID ,heavy metals ,biochemical activity - Abstract
Compounds of heavy metals have a high biochemical activity, the ability to accumulate in the environment and living organisms. The important role of microelements as catalysts of many biological reactions and pathogenic effects of heavy metals on the human body has been revealed. The main sources of heavy metals entering the environment are emissions from industrial enterprises and vehicle emissions. High concentrations of heavy metals in the environment can lead to a decrease in the adaptive reactions of the body and the development of disease states [1].
- Published
- 2022
- Full Text
- View/download PDF
49. In vitro anti oxidant activity and acute oral toxicity of Terminalia paniculata bark ethanolic extract on Sprague Dawley rats
- Author
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Ramgopal Mopuri and Balaji Meriga
- Subjects
Terminalia paniculata ,Acute toxicity ,2, 2-Diphenyl-1-picrylhydrazyl ,Biochemical activity ,Hematological parameters ,Arctic medicine. Tropical medicine ,RC955-962 ,Biology (General) ,QH301-705.5 - Abstract
Objective: To ensure the safety and evaluate the anti oxidant activity of Terminalia paniculata (T. paniculata) ethanolic extract in Sprague Dawley rats. Methods: The solvent extracts (hexane, ethyl acetate and ethanol) of T. paniculata were subjected to phytochemical analysis and their DPPH radical scavenging activity was assayed. The oral acute toxicity was evaluated using ethanolic extract of T. paniculata. Results: Ethyl acetate and ethanolic extracts showed more phytochemicals, whereas highest DPPH scavenging activity was found in ethanolic extract. In an acute toxicity study, T. paniculata ethanolic extract was orally administered (1000 mg/kg body weight) to rats and observed for 72 h for any toxic symptoms and the dose was continued up to 14 d. On the 15th day rats were sacrificed and blood samples were collected from control and test animals and analyzed for some biochemical parameters. We did not observe any behavioral changes in test groups in comparison with their controls. Also, there were no significant alterations in biochemical, hematological (hemoglobin content and blood cells count) and liver function parameters such as serum glutamate pyruvate transaminase, serum glutamate oxaloacetate transaminase, alkaline phosphatase, total proteins, albumin and bilirubin levels between T. paniculata ethanolic extract treated and normal control groups. Conclusions: Together our results demonstrated that T. paniculata ethanolic possessed potent antioxidant activity and it was safer and non toxic to rats even at higher doses and therefore could be well considered for further investigation for its medicinal and therapeutic efficacy.
- Published
- 2014
- Full Text
- View/download PDF
50. Relative Specificity: All Substrates Are Not Created Equal
- Author
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Yan Zeng
- Subjects
Relative specificity ,Biochemical activity ,Substrates ,Biological systems ,Biology (General) ,QH301-705.5 ,Computer applications to medicine. Medical informatics ,R858-859.7 - Abstract
A biological molecule, e.g., an enzyme, tends to interact with its many cognate substrates, targets, or partners differentially. Such a property is termed relative specificity and has been proposed to regulate important physiological functions, even though it has not been examined explicitly in most complex biochemical systems. This essay reviews several recent large-scale studies that investigate protein folding, signal transduction, RNA binding, translation and transcription in the context of relative specificity. These results and others support a pervasive role of relative specificity in diverse biological processes. It is becoming clear that relative specificity contributes fundamentally to the diversity and complexity of biological systems, which has significant implications in disease processes as well.
- Published
- 2014
- Full Text
- View/download PDF
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