62 results on '"Bernd Oppermann"'
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2. Vorschriften und Gesetze im Zusammenhang mit mikrobiologischen Arbeiten
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Markus Pötter, Christian Ewering, Alexander Steinbüchel, and Fred Bernd Oppermann-Sanio
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Der Umgang mit Mikroorganismen ist in Deutschland durch ein dichtes Netz von Gesetzen und Verordnungen geregelt. Die fur das MIKROBIOLOGISCHE PRAKTIKUM relevanten Bestimmungen werden im Folgenden erlautert. In anderen Staaten (z. B. Osterreich oder Schweiz) gelten andere Gesetze und Vorschriften.
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- 2021
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3. Mikrobiologisches Praktikum
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Alexander Steinbüchel, Fred Bernd Oppermann-Sanio, Christian Ewering, and Markus Pötter
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Chemistry - Published
- 2021
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4. Methoden
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Alexander Steinbüchel, Fred Bernd Oppermann-Sanio, Christian Ewering, and Markus Pötter
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- 2021
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5. Corrigendum
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Jan Hendrik, Wübbeler, Fred Bernd, Oppermann-Sanio, Andrea, Ockenfels, Annika, Röttig, Alena, Osthaar-Ebker, Susanne, Verbarg, Anja, Poehlein, Mohamed H, Madkour, Ahmed M, Al-Ansari, Naief H, Almakishah, Rolf, Daniel, and Alexander, Steinbüchel
- Published
- 2020
6. Wunscherfüllende Zahnmedizin: die Indikation als Grundlage zahnärztlichen Handelns
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Gerald Neitzke and Bernd Oppermann
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03 medical and health sciences ,Philosophy ,Issues, ethics and legal aspects ,0302 clinical medicine ,Health (social science) ,Health Policy ,060301 applied ethics ,030212 general & internal medicine ,06 humanities and the arts ,0603 philosophy, ethics and religion - Abstract
Zahnarzte werden haufig mit dem Wunsch ihrer Patienten nach asthetischen oder kosmetischen Behandlungsmasnahmen konfrontiert. Daruber hinaus sind bereits vielen Therapieformen der Zahnmedizin asthetische Aspekte immanent. Deren ethische Zulassigkeit im Rahmen professioneller zahnarztlicher Tatigkeit soll untersucht werden. Als ein wesentliches Kriterium, das dem Zahnarzt hilft, eine Entscheidung fur oder gegen asthetisch motivierte Behandlungswunsche zu treffen, wird die Indikation benannt. Bei der Indikation handelt es sich um die fachlich begrundete Einschatzung, dass eine Behandlungsmasnahme geeignet ist, ein angestrebtes Therapieziel zu erreichen. Die Indikation muss empirisch, final und kausal begrundet werden. Dazu bedarf es einer zahnarztlichen Befundung, eines zahnmedizinisch relevanten Behandlungsziels und eines ausreichenden Wirksamkeitsnachweises der Therapieform. Zusatzlich mussen individuelle Faktoren beim Patienten gepruft werden, die neben zahnmedizinischen auch allgemeinmedizinische und soziale Aspekte betreffen. Die Indikation weist als handlungsleitendes Werturteil eine Reihe von normativen Implikationen auf. Dazu zahlen sozialrechtliche Konsequenzen (Kostenerstattung durch Krankenversicherung) und Folgen fur das Professionsverstandnis der Zahnheilkunde. Wenn fur eine gewunschte zahnarztliche Masnahme die Indikation nicht gestellt wird, ist weiter zu prufen, ob sie im Rahmen der gesetzlich regulierten Professionsgrenzen zulassig ist. Alle Eingriffe, die daruber hinausgehen, liegen auserhalb der zahnarztlichen Profession und werden als blose kosmetische Dienstleistung erbracht. Dies kann zu einer Erosion der normativen Grundlagen und zu einer Deprofessionalisierung der Zahnheilkunde fuhren.
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- 2016
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7. Corrigendum: Sphingomonas jeddahensis sp. nov., isolated from Saudi Arabian desert soil
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Mohamed H. Madkour, Fred Bernd Oppermann-Sanio, Annika Röttig, Naief H. Almakishah, Alexander Steinbüchel, Anja Poehlein, Susanne Verbarg, Jan Hendrik Wübbeler, Rolf Daniel, Ahmed M. Al-Ansari, Andrea Ockenfels, and Alena Osthaar-Ebker
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0106 biological sciences ,0303 health sciences ,Desert (philosophy) ,General Medicine ,Biology ,Sphingomonas ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Microbiology ,03 medical and health sciences ,Botany ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology - Published
- 2020
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8. Sphingomonas jeddahensis sp. nov., isolated from Saudi Arabian desert soil
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Alexander Steinbüchel, Naief H. Almakishah, Andrea Ockenfels, Alena Osthaar-Ebker, Ahmed M. Al-Ansari, Anja Poehlein, Susanne Verbarg, Annika Röttig, Mohamed H. Madkour, Fred Bernd Oppermann-Sanio, Jan Hendrik Wübbeler, and Rolf Daniel
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0301 basic medicine ,DNA, Bacterial ,Ubiquinone ,Saudi Arabia ,Microbiology ,Genome ,Sphingomonas ,03 medical and health sciences ,Glycolipid ,RNA, Ribosomal, 16S ,Botany ,Sphingomonas mucosissima ,Ecology, Evolution, Behavior and Systematics ,Phospholipids ,Phylogeny ,Soil Microbiology ,Whole genome sequencing ,Base Composition ,biology ,Strain (chemistry) ,desert soil ,draft genome sequence ,Fatty Acids ,General Medicine ,Sequence Analysis, DNA ,biology.organism_classification ,16S ribosomal RNA ,Bacterial Typing Techniques ,030104 developmental biology ,lipids (amino acids, peptides, and proteins) ,Desert Climate ,Glycolipids ,Soil microbiology - Abstract
A novel Sphingomonas strain was isolated from a sample of desert soil collected near Jeddah in Saudi Arabia. A polyphasic approach was performed to characterize this strain, initially designated as G39T. Cells of strain G39T are motile, Gram-negative, catalase- and oxidase-positive. The strain is able to grow aerobically at 20-35 °C, pH 6.5-8 and tolerates up to 4 % (w/v) NaCl. Based on 16S rRNA gene sequence similarity, the closest relative type strains of G39T are Sphingomonas mucosissima DSM 17494T (98.6 %), S. dokdonensis DSM 21029T (98.4 %) and S. hankookensis DSM 23329T (97.4 %). Furthermore, the average nucleotide identities between the draft genome sequence of strain G39T and the genome sequences of all other available and related Sphingomonas species are significantly below the threshold of 94 %. The G+C content of the draft genome (3.12 Mbp) is 65.84 %. The prevalent (>5 %) cellular fatty acids of G39T were C18 : 1ω7c, C16 : 1ω7c and/or C16 : 1ω6c, C14 : 0 2-OH and C16 : 0. The only detectable respiratory quinone was ubiquinone-10 and the polar lipids profile is composed of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, sphingoglycolipid, as well as unidentified lipids, phospholipids and glycolipids. The results of the conducted polyphasic approach confirmed that this isolate represents a novel species of the genus Sphingomonas, for which the name Sphingomonas jeddahensis sp. nov. is proposed. The type strain of this species is G39T (=DSM 103790T=LMG 29955T). peerReviewed
- Published
- 2017
9. The Uniform Application of Articles 101 and 102 TFEU in German Competition Law
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Bernd Oppermann and Ahmad Chmeis
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German ,Competition (economics) ,Criminalization ,Law ,language ,Economics ,Damages ,Merger control ,Competition law ,Enforcement ,Directive ,language.human_language - Abstract
This chapter addresses the uniform application of Articles 101 and 102 TFEU in the context of German competition law. The Eighth Amendment to the German Act against Restrictions of Competition (“GWB”) has brought about a certain approximation to European competition law, waiving national particularities to implement European elements. However, some German traditions and specificities have remained. The intermediate status of European unification gives reason to examine the degree of the harmonization of German competition law with regard to the decentralized application of Articles 101 and 102 TFEU. The investigation provided shall not be limited to substantive and procedural aspects of Articles 101 and 102 TFEU, but rather includes issues related to merger control, to the economic activity of the public sector, and to private enforcement. The present synopsis may suggest some further need for harmonization by the upcoming Ninth Amendment to the GWB with its purpose to ensure an effective and uniform application of Articles 101 and 102 TFEU even more. This notion especially applies to judicial competition proceedings, which fall far short of the requirements as applicable in European judicial practice. In this respect, the view is supported that a criminalization of German competition law would contradict European legal requirements. Moreover, certain aspects of German merger control appear to contrast with the practice of the European Commission. The contribution concludes with some comments on the economic activity of the public sector and private enforcement with regard to the more recently introduced Directive on antitrust damages actions.
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- 2017
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10. LENIENCY POLICY IN EUROPEAN CARTEL ENFORCEMENT
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Bernd Oppermann
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Actuarial science ,Incentive ,Action (philosophy) ,Order (exchange) ,Obstacle ,Added value ,Cartel ,Business ,Procedural law ,Enforcement ,Law and economics - Abstract
Leniency programs stand for a rather easy collection of evidence and intel-ligence. Added value is achieved by hindering upcoming and maintain-ing cartels to develop an organiza-tional structure. Leniency also in-creases uncertainty on the side of the cartel members and makes it more difficult for cartel participants to reach an agreement. Furthermore, the costs of adjudicating are decreased by the legal goal-oriented activity of whistle blowers. Therefore, the leniency programs of the EU and of the most member states proved to be a success story on the one hand. In contrary, there are a few adverse effects. In a theoretical approach, the notion of leniency is contradictory since blowing the whistle is the second best choice only. To make the exemption to become the rule gives wrong incentives to the market members to opt for the first best choice in order to build a cartel either not punished or not discovered and keep silent. For quite some principle reasoning such view would create an obstacle. Moreover practically, some adverse effects have been discussed. For my part, the most crucial notion is that leniency programs are thought to help to find out well hidden cartels, in other words to encourage discovery in hard cases. Instead, leniency is not eligible to be the main tool of lazy cartel enforcement. For regular investigation, there are other incentives in the law of discovery, in procedural law, and last but not least in private enforcement due to the action provided by the legal order of member states. However, I would not hesitate to vote for its limited supplementary use in cartel matters.
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- 2016
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11. Isolation of Cyanophycin-degrading Bacteria, Cloning and Characterization of an Extracellular Cyanophycinase Gene (cphE) from Pseudomonas anguilliseptica Strain BI
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Fred Bernd Oppermann-Sanio, Alexander Steinbüchel, Martin Obst, and Heinrich Luftmann
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chemistry.chemical_classification ,biology ,Cyanophycin ,Cell Biology ,biology.organism_classification ,Biochemistry ,Molecular biology ,Serine ,chemistry.chemical_compound ,Enzyme ,chemistry ,Catalytic triad ,Cyanophycinase ,Molecular Biology ,Peptide sequence ,Pseudomonas anguilliseptica ,Histidine - Abstract
Eleven bacteria capable of utilizing cyanophycin (cyanophycin granule polypeptide (CGP)) as a carbon source for growth were isolated. One isolate was taxonomically affiliated asPseudomonas anguilliseptica strain BI, and the extracellular cyanophycinase (CphE) was studied because utilization of cyanophycin as a carbon source and extracellular cyanophycinases were hitherto not described. CphE was detected in supernatants of CGP cultures and purified from a corresponding culture of strain BI employing chromatography on the anion exchange matrix Q-Sepharose and on an arginine-agarose affinity matrix. The mature form of the inducible enzyme consisted of one type of subunit withM r = 43,000 and exhibited high specificity for CGP, whereas proteins and synthetic polyaspartic acid were not hydrolyzed or were only marginally hydrolyzed. Degradation products of the enzyme reaction were identified as aspartic acid-arginine dipeptides (β-Asp-Arg) by high performance liquid chromatography and electrospray ionization mass spectrometry. The corresponding gene (cphE, 1254 base pairs) was identified in subclones of a cosmid gene library of strain BI by heterologous active expression inEscherichia coli, and its nucleotide sequence was determined. The enzyme exhibited only 27–28% amino acid sequence identity to intracellular cyanophycinases occurring in cyanobacteria. Analysis of the amino acid sequence of cphE revealed a putative catalytic triad consisting of the motif GXSXG plus a histidine and most probably a glutamate residue. In addition, the strong inhibition of the enzyme by Pefabloc® and phenylmethylsulfonyl fluoride indicated that the catalytic mechanism of CphE is related to that of serine type proteases. Quantitative analysis on the release of β-Asp-Arg dipeptides from C-terminal labeled CGP gave evidence for an exo-degradation mechanism.
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- 2002
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12. Evaluation of non-cyanobacterial genome sequences for occurrence of genes encoding proteins homologous to cyanophycin synthetase and cloning of an active cyanophycin synthetase from Acinetobacter sp. strain DSM 587
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Martin Krehenbrink, Alexander Steinbüchel, and Fred-Bernd Oppermann-Sanio
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Cyanophycin ,Molecular Sequence Data ,Gene Expression ,medicine.disease_cause ,Biochemistry ,Microbiology ,Bordetella parapertussis ,Open Reading Frames ,chemistry.chemical_compound ,Bacterial Proteins ,Databases, Genetic ,Escherichia coli ,Genetics ,medicine ,Amino Acid Sequence ,Cloning, Molecular ,Peptide Synthases ,Molecular Biology ,Gene ,Phylogeny ,Plant Proteins ,Bordetella bronchiseptica ,pBluescript ,Acinetobacter ,Sequence Homology, Amino Acid ,biology ,Strain (chemistry) ,Desulfitobacterium hafniense ,General Medicine ,biology.organism_classification ,chemistry ,Genes, Bacterial ,Genome, Bacterial - Abstract
All publicly accessible microbial genome databases were searched for the occurrence of genes encoding proteins homologous to the cyanophycin synthetase (CphA) of Synechocystis sp. strain PCC 6803 in order to reveal the capability of microorganisms not belonging to the cyanobacteria to synthesize cyanophycin. Among 65 genome sequences, genes homologous to cphA were found in Acinetobacter sp. strain ADP1 (encoding a protein homologous to CphA with 40% amino acid identity), Bordetella bronchiseptica strain RB50 (39%), Bordetella pertussis strain Tohama I (39%), Bordetella parapertussis strain 12822 (39%), Clostridium botulinum strain ATCC 3502 (39%), Desulfitobacterium hafniense strain DCB-2 (38%) and Nitrosomonas europaea strain ATCC 25978 (37%). The gene homologous to cphA from Acinetobacter sp. strain DSM 587 was amplified by PCR, ligated to the vector pBluescript SK(-) downstream of the lac promoter and introduced into Escherichia coli. The recombinant strain of E. coli expressed CphA activity at up to 1.2 U/mg protein and accumulated cyanophycin to up to 7.5% of the cellular dry matter, indicating that CphA of Acinetobacter sp. strain DSM 587 is functionally active. In Acinetobacter sp. strain DSM 587 itself, cyanophycin accumulated to up to 1.4% of the total protein under phosphate-limited conditions, and cyanophycin synthetase activity was detected, which indicated the function of cyanophycin as a storage compound in this strain.
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- 2002
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13. Occurrence, functions and biosynthesis of polyamides in microorganisms and biotechnological production
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Fred Bernd Oppermann-Sanio and Alexander Steinbüchel
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chemistry.chemical_classification ,biology ,Cyanophycin ,Anabaena ,Molecular Sequence Data ,Synechocystis ,General Medicine ,Biodegradation ,Cyanobacteria ,biology.organism_classification ,Nylons ,chemistry.chemical_compound ,Enzyme ,Bacterial Proteins ,Polyglutamic Acid ,chemistry ,Biosynthesis ,Biochemistry ,Protein biosynthesis ,Polylysine ,Amino Acid Sequence ,Bacillus licheniformis ,Ecology, Evolution, Behavior and Systematics ,Biotechnology - Abstract
Microorganisms are able to synthesize three different polyamides by enzymatic processes independently from ribosomal protein biosynthesis: poly(gamma-D-glutamic acid), poly(epsilon-L-lysine) and multi-L-arginyl-poly(L-aspartic acid) which is also referred to as cyanophycin. These polyamides, which occur mainly in Bacillus spp. (and only a few other eubacteria and the nematocysts of Cnidaria, in Streptomyces albulus or in cyanobacteria, respectively), have recently attracted considerable interest of the chemical industry and may be suitable for various applications. This review summarizes our current knowledge on the occurrence, biosynthesis, physiological functions, and biodegradation as well as on the properties and putative applications of these polyamides. Emphasis is placed on the enzymology of the polymerization and on the genes encoding the polymerizing enzymes, which have only recently become available for cyanophycin synthetases. Prospects for novel production processes. in particular for cyanophycin, are also presented.
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- 2002
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14. Molecular Characterization of a Thermostable Cyanophycin Synthetase from the Thermophilic Cyanobacterium Synechococcus sp. Strain MA19 and In Vitro Synthesis of Cyanophycin and Related Polyamides
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Alexander Steinbüchel, Tran Hai, and Fred Bernd Oppermann-Sanio
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Hot Temperature ,Cyanophycin ,Molecular Sequence Data ,Ectoine ,Cyanobacteria ,Applied Microbiology and Biotechnology ,Substrate Specificity ,chemistry.chemical_compound ,Bacterial Proteins ,Affinity chromatography ,Enzyme Stability ,Amino Acid Sequence ,Cyanophycinase ,Cloning, Molecular ,Peptide Synthases ,Plant Proteins ,chemistry.chemical_classification ,Ecology ,biology ,Thermophile ,Structural gene ,Sequence Analysis, DNA ,Physiology and Biotechnology ,biology.organism_classification ,Molecular biology ,Nylons ,Enzyme ,chemistry ,Biochemistry ,Sequence Alignment ,Peptide Hydrolases ,Food Science ,Biotechnology ,Anabaena variabilis - Abstract
The thermophilic cyanobacterium Synechococcus sp. strain MA19 contained the structural genes for cyanophycin synthetase ( cphA ) and cyanophycinase ( cphB ), which were identified, cloned, and sequenced in this study. The translation products of cphA and cphB exhibited high levels of similarity to corresponding proteins of other cyanobacteria, such as Anabaena variabilis and Synechocystis sp. Recombinant cells of Escherichia coli harboring cphA colinear with lacPO accumulated cyanophycin that accounted for up to 25% (wt/wt) of the dry cell matter in the presence of isopropyl-β- d -thiogalactopyranoside (IPTG). The cyanophycin synthetase was enriched 123-fold to electrophoretic homogeneity from the soluble fraction of the recombinant cells by anion-exchange chromatography, affinity chromatography, and gel filtration chromatography. The purified cyanophycin synthetase maintained the parental thermophilic character and was active even after prolonged incubation at 50°C; in the presence of ectoine the enzyme retained 90% of its activity even after 2 h of incubation. The in vitro activity of the enzyme depended on ATP, primers, and both substrates, l -arginine and l -aspartic acid. In addition to native cyanophycin, the purified enzyme accepted a modified cyanophycin containing less arginine, α-arginyl aspartic acid dipeptide, and poly-α,β- dl -aspartic acid as primers and also incorporated β-hydroxyaspartic acid instead of l -aspartic acid or l -canavanine instead of l -arginine at a significant rate. The lack of specificity of this thermostable enzyme with respect to primers and substrates, the thermal stability of the enzyme, and the finding that the enzyme is suitable for in vitro production of cyanophycin make it an interesting candidate for biotechnological processes.
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- 2002
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15. Cultivation of Bacteria Producing Polyamino Acids with Liquid Manure as Carbon and Nitrogen Source
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Fred Bernd Oppermann-Sanio, Markus Pötter, and Alexander Steinbüchel
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Nitrogen ,Liquid manure ,Glutamic Acid ,chemistry.chemical_element ,Bacillus ,Bacillus subtilis ,Applied Microbiology and Biotechnology ,chemistry.chemical_compound ,Ammonia ,Environmental Microbiology and Biodegradation ,Ammonium ,Bacillus licheniformis ,Food science ,Amino Acids ,Sodium gluconate ,Ecology ,biology ,biology.organism_classification ,Manure ,Carbon ,Culture Media ,chemistry ,Biochemistry ,Food Science ,Biotechnology - Abstract
Poly(γ- d -glutamic acid) (PGA)-producing strains of Bacillus species were investigated to determine their ability to contribute to reducing the amount of ammonium nitrogen in liquid manures and their ability to convert some of the ammonium into this polyamino acid as a transient depot for nitrogen. Organisms that do these things should help solve the serious environmental problems which are caused by the use of large amounts of liquid manure resulting from intensified agriculture; these problems are mainly due to the high content of ammonium nitrogen. Bacillus licheniformis ATCC 9945 and Bacillus subtilis were able to grow in liquid manure and to produce PGA in the presence of sodium gluconate. On artificial liquid manure these two strains were able to produce 0.85 and 0.79 g of PGA per liter, respectively. Under conditions that are found in intensified farming situations the ammonia content was reduced within 48 h from 1.3 to 0.75 g/liter. One mutant of B. subtilis 1551 impaired in the catabolism of PGA was obtained after nitrosoguanidine mutagenesis. This mutant produced PGA at a final concentration of 4.8 g/liter, whereas the wild type produced only 3.7 g/liter.
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- 2001
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16. Biochemical and Molecular Characterization of the Bacillus subtilis Acetoin Catabolic Pathway
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Fred Bernd Oppermann-Sanio, Min Huang, and Alexander Steinbüchel
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Physiology and Metabolism ,Restriction Mapping ,Mutant ,Mutagenesis (molecular biology technique) ,Bacillus subtilis ,medicine.disease_cause ,Microbiology ,Open Reading Frames ,chemistry.chemical_compound ,Gene cluster ,Escherichia coli ,medicine ,Genomic library ,Molecular Biology ,Gene Library ,biology ,Acetoin ,Chromosomes, Bacterial ,biology.organism_classification ,Kinetics ,Acetoin Dehydrogenase ,chemistry ,Biochemistry ,Multigene Family ,Mutation ,Bacteria - Abstract
A recent study indicated that Bacillus subtilis catabolizes acetoin by enzymes encoded by the acu gene cluster (F. J. Grundy, D. A. Waters, T. Y. Takova, and T. M. Henkin, Mol. Microbiol. 10:259–271, 1993) that are completely different from those in the multicomponent acetoin dehydrogenase enzyme system (AoDH ES) encoded by aco gene clusters found before in all other bacteria capable of utilizing acetoin as the sole carbon source for growth. By hybridization with a DNA probe covering acoA and acoB of the AoDH ES from Clostridium magnum , genomic fragments from B. subtilis harboring acoA , acoB , acoC , acoL , and acoR homologous genes were identified, and some of them were functionally expressed in E. coli . Furthermore, acoA was inactivated in B. subtilis by disruptive mutagenesis; these mutants were impaired to express PP i -dependent AoDH E1 activity to remove acetoin from the medium and to grow with acetoin as the carbon source. Therefore, acetoin is catabolized in B. subtilis by the same mechanism as all other bacteria investigated so far, leaving the function of the previously described acu genes obscure.
- Published
- 1999
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17. Biodegradation of polyamides
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Fred Bernd Oppermann, Alexander Steinbüchel, and S. Pickartz
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chemistry.chemical_classification ,Polymers and Plastics ,biology ,Cyanophycin ,Lysine ,Glutamic acid ,Biodegradation ,Condensed Matter Physics ,biology.organism_classification ,Amino acid ,chemistry.chemical_compound ,chemistry ,Mechanics of Materials ,Polyamide ,Materials Chemistry ,Organic chemistry ,Bacillus licheniformis ,Bacteria - Abstract
Naturally occurring homopolyamides are linear poly(amino acids) consisting either of glutamic acid (poly[γ glutamic acid], γ-PGA), lysine (poly[ɛ lysine]) or arginylaspartic acid (poly[α arginylaspartic acid], cyanophycin). γ-PGA is synthesized as the major component of capsules and slimes of several Gram-positive bacteria. Purified γ-PGA produced by Bacillus licheniformis ATCC9945 is a high molecular weight, water-soluble white powder leading to highly viscous solutions at low concentrations, and is resistant to proteolytic attack. While the synthesis of γ-PGA has been investigated since its discovery in 1937, not much work has been done on the biodegradation of the polymer. A screening for γ-PGA-degrading microorganisms led to the identification and characterization of 12 bacteria species. In this paper, the results of physiological and biochemical investigations concerning the degradation of poly(γ glutamic acid) are presented.
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- 1998
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18. Mikrobiologisches Praktikum
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Alexander Steinbüchel, Fred Bernd Oppermann-Sanio, Christian Ewering, and Markus Pötter
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- 2013
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19. Exkursionen und Demonstrationen von Mikroorganismen an natürlichen Standorten, in Umweltproben und in der Industrie
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Alexander Steinbüchel, Fred Bernd Oppermann-Sanio, Christian Ewering, and Markus Pötter
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- 2012
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20. Versuche
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Alexander Steinbüchel, Fred Bernd Oppermann-Sanio, Christian Ewering, and Markus Pötter
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- 2012
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21. Modulare Zusammenstellung von Versuchen für unterschiedliche Zielgruppen
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Fred Bernd Oppermann-Sanio, Markus Pötter, Christian Ewering, and Alexander Steinbüchel
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In der nachfolgenden Tabelle (◉ Tab. 7.1) sind samtliche im Mikrobiologischen Praktikum beschriebenen Versuche, Exkursionen und Demonstrationen aufgefuhrt. Daneben sind acht Zielgruppen bzw. Ausbildungsrichtungen aufgefuhrt, denen Versuche zugeordnet sind, die uns fur die jeweilige Zielgruppe bzw. Ausbildungsrichtung besonders geeignet erscheinen (✓). Die Abschatzung der Durchfuhrbarkeit basiert auf Erfahrungswerten und berucksichtigt die fur die Versuche notwendigen Geratschaften sowie den Kenntnisstand der Teilnehmer.
- Published
- 2012
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22. Überblick über die Mikroorganismen
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Christian Ewering, Markus Pötter, Fred Bernd Oppermann-Sanio, and Alexander Steinbüchel
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Zu Beginn des Mikrobiologischen Praktikums sollen einige einfuhrende Anmerkungen gemacht werden, welche die in jeglicher Hinsicht auserordentlich grose Diversitat der Mikroorganismen verdeutlichen und einen Uberblick uber die verschiedenen Gruppen der Mikroorganismen und ihre Lebensweisen geben. Die letzte offizielle Bilanzierung des taxonomischen Standardwerkes Bergey’s Manual of Systematic Bacteriology aus dem Jahre 2003 wies exakt 6466 validierte Spezies aus, beim Schreiben dieser Auflage ist die Zahl auf rund 9000 gestiegen (angegeben in der List of Prokaryotic Names with Standing in Nomenclature, http://www.bacterio.cict.fr ). Bakterien zeichnen sich durch eine ungewohnlich grose Vielfalt aus. Entgegen haufig getatigten Auserungen betrifft dies sogar die Zellmorphologie und die Zellgrose. Besonders vielseitig ist der Stoffwechsel der Bakterien. Hier gibt es zahlreiche Stoffwechselleistungen, die ausschlieslich von Prokaryonten katalysiert werden konnen (Monopole der Prokaryonten) und ohne die ein Leben auf unserem Planeten auf lange Sicht nicht moglich ware. Diese kurzen Ausfuhrungen konnen die Lekture von Lehrbuchern der Mikrobiologie nicht ersetzen; sie sollen jedoch auf das Mikrobiologischen Praktikums einstimmen und einige besondere Aspekte beim Umgang mit Mikroorganismen hervorheben.
- Published
- 2012
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23. Methoden
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Alexander Steinbüchel, Fred Bernd Oppermann-Sanio, Christian Ewering, and Markus Pötter
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- 2012
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24. Chemikalien, Nachweisreagenzien und Medien
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Alexander Steinbüchel, Markus Pötter, Christian Ewering, and Fred Bernd Oppermann-Sanio
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Die unten aufgefuhrte Liste der Medien, die im Mikrobiologischen Praktikum Verwendung finden, verzichtet zugunsten der Ubersichtlichkeit auf das detaillierte Beschreiben der Zubereitungsweisen. Fur Ungeubte und Anfanger auf dem Gebiet sei auf die Methoden 1 und 2 verwiesen; dort sind allgemeingultige Ratschlage hierzu aufgefuhrt.
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- 2012
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25. Molecular characterization of the Pseudomonas putida 2,3-butanediol catabolic pathway
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Fred Bernd Oppermann, Min Huang, and Alexander Steinbüchel
- Subjects
DNA, Bacterial ,Operon ,Molecular Sequence Data ,Sequence Homology ,Dehydrogenase ,Microbiology ,Diacetyl reductase ,03 medical and health sciences ,chemistry.chemical_compound ,Oxidoreductase ,Genetics ,Alcaligenes ,Amino Acid Sequence ,Butylene Glycols ,Molecular Biology ,030304 developmental biology ,Alcohol dehydrogenase ,chemistry.chemical_classification ,0303 health sciences ,Base Sequence ,biology ,Pseudomonas putida ,030306 microbiology ,Acetoin ,Nucleic acid sequence ,biology.organism_classification ,Alcohol Oxidoreductases ,Biochemistry ,chemistry ,biology.protein ,DNA Probes - Abstract
The 2,3-butanediol dehydrogenase and the acetoin-cleaving system were simultaneously induced in Pseudomonas putida PpG2 during growth on 2,3-butanediol and on acetoin. Hybridization with a DNA probe covering the genes for the E1 subunits of the Alcaligenes eutrophus acetoin cleaving system and nucleotide sequence analysis identified acoA (975 bp), acoB (1020 bp), apoC (1110 bp), acoX (1053 bp) and adh (1086 bp) in a 6.3-kb genomic region. The amino acid sequences deduced from acoA, acoB, and acoC for E1 alpha (M(r) 34639), E1 beta (M(r) 37268), and E2 (M(r) 39613) of the P. putida acetoin cleaving system exhibited striking similarities to those of the corresponding components of the A. eutrophus acetoin cleaving system and of the acetoin dehydrogenase enzyme system of Pelobacter carbinolicus and other bacteria. Strong sequence similarities of the adh translational product (2,3-butanediol dehydrogenase, M(r) 38361) were obtained to various alcohol dehydrogenases belonging to the zinc- and NAD(P)-dependent long-chain (group I) alcohol dehydrogenases. Expression of the P. putida ADH in Escherichia coli was demonstrated. The aco genes and adh constitute presumably one single operon which encodes all enzymes required for the conversion of 2,3-butanediol to central metabolites.
- Published
- 1994
- Full Text
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26. Biochemical and molecular characterization of the Clostridium magnum acetoin dehydrogenase enzyme system
- Author
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Niels Krüger, Alexander Steinbüchel, Heidrun Lorenzl, and Fred Bernd Oppermann
- Subjects
Dihydrolipoamide ,Transcription, Genetic ,Protein Conformation ,Operon ,Sequence analysis ,Molecular Sequence Data ,Pyruvate Dehydrogenase Complex ,Dehydrogenase ,Biology ,Dihydrolipoyllysine-Residue Acetyltransferase ,Microbiology ,03 medical and health sciences ,Bacterial Proteins ,Acetyltransferases ,Multienzyme Complexes ,Flavins ,medicine ,Amino Acid Sequence ,Molecular Biology ,Dihydrolipoamide Dehydrogenase ,030304 developmental biology ,Clostridium ,0303 health sciences ,Dihydrolipoamide dehydrogenase ,Base Sequence ,Models, Genetic ,Sequence Homology, Amino Acid ,030306 microbiology ,Structural gene ,Correction ,Gene Expression Regulation, Bacterial ,Pyruvate dehydrogenase complex ,Molecular biology ,DNA-Binding Proteins ,Acetoin Dehydrogenase ,Biochemistry ,Genes, Bacterial ,Multigene Family ,Sequence Analysis ,Transcription Factors ,Research Article ,medicine.drug - Abstract
E2 (dihydrolipoamide acetyltransferase) and E3 (dihydrolipoamide dehydrogenase) of the Clostridium magnum acetoin dehydrogenase enzyme system were copurified in a three-step procedure from acetoin-grown cells. The denatured E2-E3 preparation comprised two polypeptides with M(r)s of 49,000 and 67,000, respectively. Microsequencing of both proteins revealed identical amino acid sequences. By use of oligonucleotide probes based on the N-terminal sequences of the alpha and beta subunits of E1 (acetoin dehydrogenase, thymine PPi dependent), which were purified recently (H. Lorenzl, F.B. Oppermann, B. Schmidt, and A. Steinbüchel, Antonie van Leeuwenhoek 63:219-225, 1993), and of E2-E3, structural genes acoA (encoding E1 alpha), acoB (encoding E1 beta), acoC (encoding E2), and acoL (encoding E3) were identified on a single ClaI restriction fragment and expressed in Escherichia coli. The nucleotide sequences of acoA (978 bp), acoB (999 bp), acoC (1,332 bp), and acoL (1,734 bp), as well as those of acoX (996 bp) and acoR (1,956 bp), were determined. The amino acid sequences deduced from acoA, acoB, acoC, and acoL for E1 alpha (M(r), 35,532), E1 beta (M(r), 35,541), E2 (M(r), 48,149), and E3 (M(r), 61,255) exhibited striking similarities to the amino acid sequences of the corresponding components of the Pelobacter carbinolicus acetoin dehydrogenase enzyme system and the Alcaligenes eutrophus acetoin-cleaving system, respectively. Significant homologies to the enzyme components of various 2-oxo acid dehydrogenase complexes were also found, indicating a close relationship between the two enzyme systems. As a result of the partial repetition of the 5' coding region of acoC into the corresponding part of acoL, the E3 component of the C. magnum acetoin dehydrogenase enzyme system contains an N-terminal lipoyl domain, which is unique among dihydrolipoamide dehydrogenases. We found strong similarities between the AcoR and AcoX sequences and the A. eutrophus acoR gene product, which is a regulatory protein required for expression of the A. eutrophus aco genes, and the A. eutrophus acoX gene product, which has an unknown function, respectively. The aco genes of C. magnum are probably organized in one single operon (acoABXCL); acoR maps upstream of this operon.
- Published
- 1994
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27. Modulare Zusammenstellung von Versuchen für unterschiedliche Zielgruppen
- Author
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ALEXANDER STEINBÜCHEL and FRED BERND OPPERMANN-SANIO
- Published
- 2011
- Full Text
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28. Methoden
- Author
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ALEXANDER STEINBÜCHEL and FRED BERND OPPERMANN-SANIO
- Published
- 2011
- Full Text
- View/download PDF
29. Chemikalien, Nachweisreagenzien und Medien
- Author
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ALEXANDER STEINBÜCHEL and FRED BERND OPPERMANN-SANIO
- Published
- 2011
- Full Text
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30. Versuche
- Author
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ALEXANDER STEINBÜCHEL and FRED BERND OPPERMANN-SANIO
- Published
- 2011
- Full Text
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31. Exkursionen und Demonstrationen von Mikroorganismen an natürlichen Standorten, in Umweltproben und in der Industrie
- Author
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Fred Bernd Oppermann-Sanio and Alexander Steinbüchel
- Abstract
Botaniker und Zoologen konnen eine Vielzahl unterschiedlichster Pflanzen und Tiere direkt vor der „Haustur“ einsammeln, um sie im Praktikum zu demonstrieren und in vielfaltiger Art und Weise untersuchen zu lassen. Auch sind Zoologische und Botanische Garten verbreitet. Dagegen scheint es auf den ersten Blick schwierig zu sein, Mikroorganismen an ihren naturlichen Standorten ausfindig zu machen und deren Leistungen zu demonstrieren. In diesem Abschnitt des Buches stellen wir gewerbliche und kommunale Einrichtungen sowie naturliche Standorte vor, an denen Mikroorganismen „besichtigt“ werden konnen.
- Published
- 2011
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32. Vorschriften und Gesetze im Zusammenhang mit mikrobiologischen Arbeiten
- Author
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ALEXANDER STEINBÜCHEL and FRED BERND OPPERMANN-SANIO
- Published
- 2011
- Full Text
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33. Überblick über die Mikroorganismen
- Author
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ALEXANDER STEINBÜCHEL and FRED BERND OPPERMANN-SANIO
- Published
- 2011
- Full Text
- View/download PDF
34. Purification and characterization of acetoin:2,6-dichlorophenolindophenol oxidoreductase, dihydrolipoamide dehydrogenase, and dihydrolipoamide acetyltransferase of the Pelobacter carbinolicus acetoin dehydrogenase enzyme system
- Author
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Fred Bernd Oppermann, Alexander Steinbüchel, and Bernhard Schmidt
- Subjects
Immunodiffusion ,Molecular Sequence Data ,Pyruvate Dehydrogenase Complex ,Dihydrolipoyllysine-Residue Acetyltransferase ,Microbiology ,Cofactor ,Diacetyl reductase ,Bacteria, Anaerobic ,03 medical and health sciences ,chemistry.chemical_compound ,Acetyltransferases ,Multienzyme Complexes ,Oxidoreductase ,Sequence Homology, Nucleic Acid ,Amino Acid Sequence ,Dichlorophenolindophenol ,Molecular Biology ,Dihydrolipoamide Dehydrogenase ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Dihydrolipoamide dehydrogenase ,biology ,030306 microbiology ,Acetoin ,Chromatography, Ion Exchange ,Diacetyl ,Molecular biology ,Kinetics ,Acetoin Dehydrogenase ,chemistry ,Biochemistry ,biology.protein ,Indicators and Reagents ,Oxidoreductases ,Research Article - Abstract
Dihydrolipoamide dehydrogenase (DHLDH), dihydrolipoamide acetyltransferase (DHLTA), and acetoin: 2,6-dichlorophenolindophenol oxidoreductase (Ao:DCPIP OR) were purified from acetoin-grown cells of Pelobacter carbinolicus. DHLDH had a native Mr of 110,000, consisted of two identical subunits of Mr 54,000, and reacted only with NAD(H) as a coenzyme. The N-terminal amino acid sequence included the flavin adenine dinucleotide-binding site and exhibited a high degree of homology to other DHLDHs. DHLTA had a native Mr of greater than 500,000 and consisted of subunits identical in size (Mr 60,000). The enzyme was highly sensitive to proteolytic attack. During limited tryptic digestion, two major fragments of Mr 32,500 and 25,500 were formed. Ao:DCPIP OR consisted of two different subunits of Mr 37,500 and 38,500 and had a native Mr in the range of 143,000 to 177,000. In vitro in the presence of DCPIP, it catalyzed a thiamine pyrophosphate-dependent oxidative-hydrolytic cleavage of acetoin, methylacetoin, and diacetyl. The combination of purified Ao:DCPIP OR, DHLTA, and DHLDH in the presence of thiamine pyrophosphate and the substrate acetoin or methylacetoin resulted in a coenzyme A-dependent reduction of NAD. In the strictly anaerobic acetoin-utilizing bacteria P. carbinolicus, Pelobacter venetianus, Pelobacter acetylenicus, Pelobacter propionicus, Acetobacterium carbinolicum, and Clostridium magnum, the enzymes Ao:DCPIP OR, DHLTA, and DHLDH were induced during growth on acetoin, whereas they were absent or scarcely present in cells grown on a nonacetoinogenic substrate.
- Published
- 1991
- Full Text
- View/download PDF
35. Synthesis and accumulation of cyanophycin in transgenic strains of Saccharomyces cerevisiae
- Author
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Anna Steinle, Fred Bernd Oppermann-Sanio, Rudolf Reichelt, and Alexander Steinbüchel
- Subjects
Arginine ,Cyanophycin ,Lysine ,Saccharomyces cerevisiae ,Genetic Vectors ,Gene Expression ,medicine.disease_cause ,Applied Microbiology and Biotechnology ,chemistry.chemical_compound ,Bacterial Proteins ,Microscopy, Electron, Transmission ,Aspartic acid ,medicine ,Amino Acids ,Cloning, Molecular ,Escherichia coli ,Chromatography, High Pressure Liquid ,Plant Proteins ,chemistry.chemical_classification ,Ecology ,biology ,Synechocystis ,biology.organism_classification ,Physiology and Biotechnology ,Molecular biology ,Yeast ,Recombinant Proteins ,Amino acid ,Biochemistry ,chemistry ,Electrophoresis, Polyacrylamide Gel ,sense organs ,Food Science ,Biotechnology - Abstract
Cyanophycin [multi- l -arginyl-poly( l -aspartic acid) (CGP)] was, for the first time, produced in yeast. As yeasts are very important production organisms in biotechnology, it was determined if CGP can be produced in two different strains of Saccharomyces cerevisiae . The episomal vector systems pESC (with the galactose-inducible promoter GAL1 ) and pYEX-BX (with the copper ion-inducible promoter CUP1 ) were chosen to express the cyanophycin synthetase gene from the cyanobacterium Synechocystis sp. strain PCC 6308 ( cphA 6308 ) in yeast. Expression experiments with transgenic yeasts revealed that the use of the CUP1 promoter is much more efficient for CGP production than the GAL1 promoter. As observed by electrophoresis of isolated CGP in sodium dodecyl sulfate-polyacrylamide gels, the yeast strains produced two different types of polymer: the water-soluble and the water-insoluble CGP were observed as major and minor forms of the polymer, respectively. A maximum CGP content of 6.9% (wt/wt) was detected in the cells. High-performance liquid chromatography analysis showed that the isolated polymers consisted mainly of the two amino acids aspartic acid and arginine and that, in addition, a minor amount (2 mol%) of lysine was present. Growth of transgenic yeasts in the presence of 15 mM lysine resulted in an incorporation of up to 10 mol% of lysine into CGP. Anti-CGP antibodies generated against CGP isolated from Escherichia coli TOP10 harboring cphA 6308 reacted with insoluble CGP but not with soluble CGP, if applied in Western or dot blots.
- Published
- 2008
36. D) The Turku-Declaration
- Author
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Bernd Oppermann and Joachim Heilmann
- Subjects
Political science ,Law ,Declaration - Published
- 2007
- Full Text
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37. IV. Projektberichte der vier russischen Universitäten
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Joachim Heilmann and Bernd Oppermann
- Published
- 2007
- Full Text
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38. Reform der russischen Juristenausbildung
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Joachim Heilmann and Bernd Oppermann
- Published
- 2007
- Full Text
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39. Vorwort
- Author
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Joachim Heilmann, Bernd Oppermann, and Martin Groß
- Published
- 2007
- Full Text
- View/download PDF
40. Conversion of the nitrogen content in liquid manure into biomass and polyglutamic acid by a newly isolated strain of Bacillus licheniformis
- Author
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Astrid Hoppensack, Fred Bernd Oppermann-Sanio, and Alexander Steinbüchel
- Subjects
biology ,Carbon-to-nitrogen ratio ,Nitrogen ,Liquid manure ,chemistry.chemical_element ,Biomass ,Bacillus ,biology.organism_classification ,Microbiology ,Manure ,Quaternary Ammonium Compounds ,chemistry.chemical_compound ,chemistry ,Biochemistry ,Polyglutamic Acid ,Genetics ,Ammonium ,Bacillus licheniformis ,Molecular Biology ,Nitrogen cycle ,Nuclear chemistry - Abstract
Extensive spreading of liquid manure onto agricultural fields causes eutrophication of ground and surface water and also pollution of the atmosphere due to the high ammonium nitrogen content. A poly(gamma-glutamic acid) (PGA)-producing strain of Bacillus licheniformis was isolated in this study and investigated for its ability to reduce the ammonium nitrogen by converting ammonium into biomass and PGA as depot forms of nitrogen. In batch cultivations swine manure and an optimized mineral salts medium were used for PGA production. For example the cultivation of B. licheniformis strain S2 in liquid manure, which was modified by adding of 18 g citrate and 80 g glycerol l(-1) and exhibited a carbon to nitrogen ratio of 15.5:1, led to severe reduction of the ammonium content from 2.83 to 0.1 g x l(-1) and to the production of 0.16 g PGA and 7.5 g cell dry mass l(-1) within 410 h. Approximately 28% (w/w) of the total nitrogen was converted into cellular biomass, whereas 0.1% (w/w) was used for the production of PGA. In addition, approximately 33% (w/v) of the original ammonium was lost by stripping.
- Published
- 2003
41. Mikrobiologisches Praktikum
- Author
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ALEXANDER STEINBÜCHEL and FRED BERND OPPERMANN-SANIO
- Published
- 2003
- Full Text
- View/download PDF
42. Cyanophycin
- Author
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Fred Bernd Oppermann‐Sanio and Alexander Steinbüchel
- Published
- 2002
- Full Text
- View/download PDF
43. Technical-Scale Production of Cyanophycin with Recombinant Strains of Escherichia coli
- Author
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Holger Schmidt, Kay Frey, Fred Bernd Oppermann-Sanio, and Alexander Steinbüchel
- Subjects
Cyanobacteria ,Cyanophycin ,Repressor ,medicine.disease_cause ,Applied Microbiology and Biotechnology ,beta-Lactamases ,law.invention ,chemistry.chemical_compound ,Bacterial Proteins ,law ,medicine ,Escherichia coli ,Plant Proteins ,Recombination, Genetic ,Ecology ,biology ,Synechocystis ,biology.organism_classification ,Physiology and Biotechnology ,Enterobacteriaceae ,Culture Media ,chemistry ,Biochemistry ,Recombinant DNA ,Transformation, Bacterial ,Bacteria ,Food Science ,Biotechnology - Abstract
By the use of Escherichia coli DH1 harboring cphA from Synechocystis sp. strain PCC6803, large-scale production of cyanophycin at 30- and 500-liter culture volumes was established. Transcription of cphA was controlled by the thermosensitive cI857 repressor, which enabled induction of cphA by a simple temperature shift in the culture fluid. Maximum cyanophycin cell content of up to 24% (wt/wt) of cellular dry matter was obtained by induction in the early exponential growth phase and cultivation of the cells in terrific broth complex medium. Synthesis of cyanophycin was found to be strongly dependent on the presence of complex components, and in mineral salts medium the cells synthesized and accumulated cyanophycin only if Casamino Acids were added. Cultivations were done at the 500-liter scale, allowing the provision of cell mass for the preparation of cyanophycin at the kilogram scale. Isolation of cyanophycin was achieved by a new acid extraction procedure which allowed large-scale purification of the polyamide from whole cells.
- Published
- 2002
44. Isolation of cyanophycin-degrading bacteria, cloning and characterization of an extracellular cyanophycinase gene (cphE) from Pseudomonas anguilliseptica strain BI. The cphE gene from P. anguilliseptica BI encodes a cyanophycinhydrolyzing enzyme
- Author
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Martin, Obst, Fred Bernd, Oppermann-Sanio, Heinrich, Luftmann, and Alexander, Steinbüchel
- Subjects
Bacterial Proteins ,Sequence Homology, Amino Acid ,Pseudomonas ,Molecular Sequence Data ,Escherichia coli ,Amino Acid Sequence ,Cloning, Molecular ,Chromatography, High Pressure Liquid ,Recombinant Proteins ,Peptide Hydrolases ,Plant Proteins - Abstract
Eleven bacteria capable of utilizing cyanophycin (cyanophycin granule polypeptide (CGP)) as a carbon source for growth were isolated. One isolate was taxonomically affiliated as Pseudomonas anguilliseptica strain BI, and the extracellular cyanophycinase (CphE) was studied because utilization of cyanophycin as a carbon source and extracellular cyanophycinases were hitherto not described. CphE was detected in supernatants of CGP cultures and purified from a corresponding culture of strain BI employing chromatography on the anion exchange matrix Q-Sepharose and on an arginine-agarose affinity matrix. The mature form of the inducible enzyme consisted of one type of subunit with M(r) = 43,000 and exhibited high specificity for CGP, whereas proteins and synthetic polyaspartic acid were not hydrolyzed or were only marginally hydrolyzed. Degradation products of the enzyme reaction were identified as aspartic acid-arginine dipeptides (beta-Asp-Arg) by high performance liquid chromatography and electrospray ionization mass spectrometry. The corresponding gene (cphE, 1254 base pairs) was identified in subclones of a cosmid gene library of strain BI by heterologous active expression in Escherichia coli, and its nucleotide sequence was determined. The enzyme exhibited only 27-28% amino acid sequence identity to intracellular cyanophycinases occurring in cyanobacteria. Analysis of the amino acid sequence of cphE revealed a putative catalytic triad consisting of the motif GXSXG plus a histidine and most probably a glutamate residue. In addition, the strong inhibition of the enzyme by Pefabloc((R)) and phenylmethylsulfonyl fluoride indicated that the catalytic mechanism of CphE is related to that of serine type proteases. Quantitative analysis on the release of beta-Asp-Arg dipeptides from C-terminal labeled CGP gave evidence for an exo-degradation mechanism.
- Published
- 2002
45. Heterologous expression of cyanophycin synthetase and cyanophycin synthesis in the industrial relevant bacteria Corynebacterium glutamicum and Ralstonia eutropha and in Pseudomonas putida
- Author
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Ingo Voss, Elsayed Aboulmagd, Alexander Steinbüchel, and Fred Bernd Oppermann-Sanio
- Subjects
Polymers and Plastics ,Cyanophycin ,Gene Expression ,Bioengineering ,Corynebacterium ,Corynebacterium glutamicum ,Microbiology ,Bacterial genetics ,Biomaterials ,chemistry.chemical_compound ,Industrial Microbiology ,Ralstonia ,Bacterial Proteins ,Materials Chemistry ,Transgenes ,Peptide Synthases ,Plant Proteins ,biology ,Chemistry ,Pseudomonas putida ,biology.organism_classification ,Transformation (genetics) ,Cupriavidus necator ,Heterologous expression ,Transformation, Bacterial ,Bacteria - Published
- 2002
46. Molecular characterization of the cyanophycin synthetase from Synechocystis sp. strain PCC6308
- Author
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Elsayed Aboulmagd, Alexander Steinbüchel, and Fred Bernd Oppermann-Sanio
- Subjects
DNA, Bacterial ,Cyanophycin ,Molecular Sequence Data ,medicine.disease_cause ,Cyanobacteria ,Biochemistry ,Microbiology ,chemistry.chemical_compound ,Bacterial Proteins ,Genetics ,medicine ,Escherichia coli ,Cyanophycinase ,Amino Acid Sequence ,Cloning, Molecular ,Peptide Synthases ,Molecular Biology ,Plant Proteins ,biology ,Synechocystis ,Structural gene ,General Medicine ,Sequence Analysis, DNA ,biology.organism_classification ,Enzyme assay ,Genetic translation ,chemistry ,Genes, Bacterial ,biology.protein ,Heterologous expression ,Peptide Hydrolases - Abstract
A 3878-bp genomic region from the cyanobacterium Synechocystis sp. strain PCC6308, amplified by inverse PCR, harbored the structural genes cphA (2625 bp) and cphB (819 bp) encoding cyanophycin synthetase and cyanophycinase, respectively. Both primary structures exhibited a high degree of similarity to the corresponding translational products from other cyanobacteria. Five regions were localized in the cyanophycin synthetase consensus sequence by their resemblance to conserved sites of ATP-dependent carboxylate-amine/thiol ligases and three substrate ligases. The functionality of cphA was proven by heterologous expression of active enzyme and synthesis of cyanophycin in Escherichia coli, which led to a maximum cyanophycin content of 26.6% (w/w) of cell dry mass. Furthermore, a modified radiometric enzyme assay for a more reliable and feasible measurement of cyanophycin synthetase activity was developed and applied to reveal the substrate specificity of the enzyme.
- Published
- 2000
47. Identification and molecular characterization of the aco genes encoding the Pelobacter carbinolicus acetoin dehydrogenase enzyme system
- Author
-
Alexander Steinbüchel and Fred Bernd Oppermann
- Subjects
Transcription, Genetic ,Molecular Sequence Data ,Dehydrogenase ,Pyruvate Dehydrogenase Complex ,Biology ,Regulatory Sequences, Nucleic Acid ,Dihydrolipoyllysine-Residue Acetyltransferase ,Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,Bacteria, Anaerobic ,Bacterial Proteins ,Oxidoreductase ,Acetyltransferases ,Multienzyme Complexes ,Escherichia coli ,Amino Acid Sequence ,Molecular Biology ,030304 developmental biology ,Dihydrolipoamide Dehydrogenase ,chemistry.chemical_classification ,0303 health sciences ,Dihydrolipoamide dehydrogenase ,Base Sequence ,Sequence Homology, Amino Acid ,030306 microbiology ,Acetoin ,Structural gene ,Sequence Analysis, DNA ,Pyruvate dehydrogenase complex ,Recombinant Proteins ,Amino acid ,Biochemistry ,chemistry ,Acetoin Dehydrogenase ,Genes, Bacterial ,Sulfurtransferases ,Oxidoreductases ,Research Article - Abstract
Use of oligonucleotide probes, which were deduced from the N-terminal sequences of the purified enzyme components, identified the structural genes for the alpha and beta subunits of E1 (acetoin:2,6-dichlorophenolindophenol oxidoreductase), E2 (dihydrolipoamide acetyltransferase), and E3 (dihydrolipoamide dehydrogenase) of the Pelobacter carbinolicus acetoin dehydrogenase enzyme system, which were designated acoA, acoB, acoC, and acoL, respectively. The nucleotide sequences of acoA (979 bp), acoB (1,014 bp), acoC (1,353 bp), and acoL (1,413 bp) as well as of acoS (933 bp), which encodes a protein with an M(r) of 34,421 exhibiting 64.7% amino acid identity to the Escherichia coli lipA gene product, were determined. These genes are clustered on a 6.1-kbp region. Heterologous expression of acoA, acoB, acoC, acoL, and acoS in E. coli was demonstrated. The amino acid sequences deduced from acoA, acoB, acoC, and acoL for E1 alpha (M(r), 34,854), E1 beta (M(r), 36,184), E2 (M(r), 47,281), and E3 (M(r), 49,394) exhibited striking similarities to the amino acid sequences of the components of the Alcaligenes eutrophus acetoin-cleaving system. Homologies of up to 48.7% amino acid identity to the primary structures of the enzyme components of various 2-oxo acid dehydrogenase complexes also were found. In addition, the respective genes of the 2-oxo acid dehydrogenase complexes and of the acetoin dehydrogenase enzyme system were organized very similarly, indicating a close relationship of the P. carbinolicus acetoin dehydrogenase enzyme system to 2-oxo acid dehydrogenase complexes.
- Published
- 1994
48. Die Eintragungsfähigkeit der kaufmännischen Generalvollmacht in das Handelsregister
- Author
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Hans-Patrick Schroeder and Bernd Oppermann
- Abstract
Der Beitrag begreift die kaufmannische Generalvollmacht als Sondervollmacht des Kaufmannes auf der Grundlage der zivilrechtlichen Regeln und erortert deren gesetzlich nicht geregelte registerrechtliche Behandlung
- Published
- 2007
- Full Text
- View/download PDF
49. Utilization of methylacetoin by the strict anaerobe Pelobacter carbinolicus and consequences for the catabolism of acetoin.
- Author
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Bernd Oppermann, Fred, Steinbüchel, Alexander, and Schlegel, Hans G.
- Published
- 1988
- Full Text
- View/download PDF
50. Utilization of methylacetoin by the strict anaerobePelobacter carbinolicusand consequences for the catabolism of acetoin
- Author
-
Hans G. Schlegel, Alexander Steinbüchel, and Fred Bernd Oppermann
- Subjects
chemistry.chemical_classification ,0303 health sciences ,biology ,030306 microbiology ,Catabolism ,Stereochemistry ,Acetoin ,Acetaldehyde ,Metabolism ,biology.organism_classification ,Microbiology ,Diacetyl ,3. Good health ,03 medical and health sciences ,chemistry.chemical_compound ,chemistry ,Biochemistry ,Oxidoreductase ,Genetics ,Fermentation ,Molecular Biology ,Bacteria ,030304 developmental biology - Abstract
Pelobacter carbinolicus strain GraBd1 fermented methylacetoin, which is a good carbon source for growth ( μ = 0.16 h −1 ) of this strict anaerobic bacterium, to acetone, acetate and ethanol (main products), acetoin, 2,3-butanediol and methylbutanediol (minor products). During growth on 2,3-butanediol, acetoin and methyl-acetoin the formation of a protein exhibiting acetoin: DCPIP oxidoreductase activity is induced. This enzyme amounts to a substantial portion of the soluble proteins. In vitro, it cleaves acetoin into acetate and acetaldehyde but reacts also with diacetyl or methylacetoin. We discussed four different models for the degradation of acetoin in the cells and came to the conclusion that in vivo the oxidative-thiolytic acetoin cleavage model is most probably realized in P. carbinolicus .
- Published
- 1988
- Full Text
- View/download PDF
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